HHsearch results for GI: 254780355 and protein with PDBid: 3msu_A
>3msu_A Citrate synthase; helix bundle, APHA-beta fold, csgid, center for structural G of infectious diseases, transferase; HET: OAA; 1.84A {Francisella tularensis}
Probab=100.00 E-value=0 Score=1053.68 Aligned_cols=417 Identities=51% Similarity=0.884 Sum_probs=402.0
Q ss_pred CCCCEEEEEECCE--EEEEEEECCCCCCCCEEECCCCCCCEEEECCCCCCEEEEEEEEEEEECCCCEEEECCEEHHHHHH
Q ss_conf 9987699998998--99975230777875101001155861898888786238787565433447778989931999975
Q gi|254780355|r 1 MTDKFAKLHLGHE--EIDLPIKEGSLGSSVLDISFLHKNGIFTYDPAFSSTASCKSKITFIDGNNGILLYRGYPIEQLSE 78 (429)
Q Consensus 1 M~~~~~~l~~~~~--~~~lpi~~~~~~~~~~d~~~l~~~G~~~~dpG~~~ta~ceS~IT~IDG~~G~L~YRGY~IedLa~ 78 (429)
|+ |++||+++++ +|||||++||+|+++|||++|+++|++||||||.||++|||+||||||++|+|+||||||+|||+
T Consensus 9 ~~-~~~~l~~~~~~~~~~~p~~~~~~g~~~~d~~~l~~~g~~t~dpGl~~t~~~eS~IT~IDG~~G~L~YRGy~I~dLa~ 87 (427)
T 3msu_A 9 MS-KYATLKYADKNIEIELPVYSPSLGNDCIDVSSLVKHGIFTYDPGFMSTAACESKITYIDGGKGVLLHRGYPIEEWTQ 87 (427)
T ss_dssp SC-CEEEEEEGGGTEEEEEEEECCSSSCEEEECGGGGGGTEEEECTTCTTEEEEEESSEEEETTTTEEEETTEEHHHHHH
T ss_pred HC-CEEEEEECCCCEEEEEEEECCCCCCCEEEHHHHHCCCCEEECCCCCCCEEEEEECEEEECCCCEEEECCEEHHHHHC
T ss_conf 04-41699988976268722340888987357266653897865897688227987661071887289999946999864
Q ss_pred HCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf 08989999999818799989999999988640689989999998512476525789999999875206855767878898
Q gi|254780355|r 79 KSDFLEVCYLLLHGELANVSQQKDFNDKISRHALLNENMSRFFMGFPSSAHPMAMLVSAVGALSSFYYSPSGVQDLEQCV 158 (429)
Q Consensus 79 ~~sFeEVayLLl~GeLPt~~el~~F~~~l~~~~~lpe~v~~~i~~~p~~ahPM~~L~~~vsaL~a~~~~~~~~~d~~~~~ 158 (429)
+++|||||||||+|+|||++|+++|+..+.+++.+|+++.++++.||+++|||++|++++++|++++++..+ ++...
T Consensus 88 ~~tFEEVayLLl~GeLP~~~el~~f~~~l~~~~~lp~~~~~~~~~~p~~ahPM~~L~~~vsaL~~~~~~~~~---~~~~~ 164 (427)
T 3msu_A 88 KSNYRTLCYALIYGELPTDEQVKSFRQEIINKMPVCEHVKAAIAAMPQHTHPMSSLIAGVNVLAAEHIHNGQ---KESQD 164 (427)
T ss_dssp HCCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHHHHTTS---CCCHH
T ss_pred CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCC---HHHHH
T ss_conf 698999999998588998799888999999837763789999983875578703677788876301245541---67789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHH
Q ss_conf 88999999999999999997279853488864246887787642898410147969999987563501367876301555
Q gi|254780355|r 159 NVSLRMIAKISTIAAMIYKYSIGQPFVYPRSDLDYASNFLHMCFSVPCAEYQVNPLLARAMNRIFILHADHEQNASTSTV 238 (429)
Q Consensus 159 ~~a~rLiA~~p~i~A~~yr~~~G~~~i~Pd~~lsyaeNfL~Ml~~~~~~~~~~~~~~~~ald~~LILhADHe~NaSTft~ 238 (429)
+.+.|++|++|+|+|++||++.|+++++|+++++|++|||+||++. ...++++|..+++||++||||||||+||||||+
T Consensus 165 ~~a~~liA~~p~i~a~~yr~~~g~~~~~P~~~l~~~~nfl~ml~~~-~~~~~~~~~~~~aLd~~LILhADHe~NaSTfaa 243 (427)
T 3msu_A 165 EVAKNIVAKIATIAAMAYRHNHGKKFLEPKMEYGYAENFLYMMFAD-DESYKPDELHIKAMDTIFMLHADHEQNASTSTV 243 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHHHHHHHHCS-STTCCCCHHHHHHHHHHHHHHSCCSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC-CCCCCCCHHHHHHHHHHEEEECCCCCCHHHHHH
T ss_conf 9999988888899999999976998878852011455689997265-434799999999865224664367886167777
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHH
Q ss_conf 54420565424677675542100222035289999986215535127999999821478614302774355554034689
Q gi|254780355|r 239 RLAGSSGADPFACIAAGVACLGGRAHGGANEEALNMLMEIGSLERIPHYIMRAKDKNDPFRIMGFGHRVYRNHDPRCRIM 318 (429)
Q Consensus 239 R~vaSt~adlysai~agi~aL~GPlHGGAne~v~~ml~~I~~~~~v~~~i~~~~~~~~~~ri~GfGHrvyk~~DPRa~~l 318 (429)
|||+||++|+|+||+|||++||||+||||||+|++||++|++++++++|+.+++++++++|||||||||||++||||++|
T Consensus 244 RvvaSt~ad~ysaiaAgi~aL~GplHGGA~~~v~~~l~~i~~~~~~~~~i~~~~~~~~~~~l~GFGHrvYk~~DPRa~~l 323 (427)
T 3msu_A 244 RLSGSTGNSPYAAIIAGITALWGPAHGGANEAVLKMLSEIGSTENIDKYIAKAKDKDDPFRLMGFGHRVYKNTDPRATAM 323 (427)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHTSHHHHCHHHHHHHHHHHHCSTTHHHHHHHHHHTC-----CCSBCCSSSSSCCHHHHHH
T ss_pred HHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHH
T ss_conf 77772598577899977775158632638999999999838987899999998621156243056876688998258999
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999988860877651799999999999611531457987784478899999849996685899999999899999999
Q gi|254780355|r 319 RETMYEVLEVTGRFNDPIAQVAIELERIALEDEYFIERKLYPNVDFYSGITLRALGFPTNLFTVLFAVARTAGWVSQWTE 398 (429)
Q Consensus 319 ~~~~~~l~~~~~~~~~~~~~~a~~le~~a~~d~~~~~r~l~pNvDfysg~i~~~lGip~~~ft~iFa~~R~~Gw~AH~~E 398 (429)
++++++++++.+..++++++++.++|+++++++||++|+||||||||+|++|++||||++|||++|++||++||+|||+|
T Consensus 324 ~~~~~~l~~~~~~~~~~l~~ia~~le~~~~~~~~~~~k~l~pNVDfysg~l~~~lGip~~~~t~lFai~R~~Gw~AH~~E 403 (427)
T 3msu_A 324 KKNCEEILAKLGHSDNPLLTVAKKLEEIALQDEFFIERKLFSNVDFYSGIILKAMGIPEDMFTAIFALARTSGWISQWIE 403 (427)
T ss_dssp HHHTHHHHHHGGGCSSHHHHHHHHHHHHHC------CCCCCBCHHHHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999982887427999999999999888746678998370779999999819686766499999999999999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 970789830045621058876870
Q gi|254780355|r 399 MIVDPSRRIGRPRQLYTGALKRDY 422 (429)
Q Consensus 399 q~~~~~~ri~RP~~~Y~G~~~r~y 422 (429)
|++++.+||+||||+||||.+|+|
T Consensus 404 q~~~~~~riiRPr~~Y~G~~~r~y 427 (427)
T 3msu_A 404 MVNDPAQKIGRPRQLYTGATNRNF 427 (427)
T ss_dssp HHHCTTCCCCCCEEEECSCCSCCC
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 971868882186870169999998