HHsearch results for GI: 254780355 and protein with PDBid: 3msu_A

>3msu_A Citrate synthase; helix bundle, APHA-beta fold, csgid, center for structural G of infectious diseases, transferase; HET: OAA; 1.84A {Francisella tularensis}
Probab=100.00  E-value=0  Score=1053.68  Aligned_cols=417  Identities=51%  Similarity=0.884  Sum_probs=402.0

Q ss_pred             CCCCEEEEEECCE--EEEEEEECCCCCCCCEEECCCCCCCEEEECCCCCCEEEEEEEEEEEECCCCEEEECCEEHHHHHH
Q ss_conf             9987699998998--99975230777875101001155861898888786238787565433447778989931999975
Q gi|254780355|r    1 MTDKFAKLHLGHE--EIDLPIKEGSLGSSVLDISFLHKNGIFTYDPAFSSTASCKSKITFIDGNNGILLYRGYPIEQLSE   78 (429)
Q Consensus         1 M~~~~~~l~~~~~--~~~lpi~~~~~~~~~~d~~~l~~~G~~~~dpG~~~ta~ceS~IT~IDG~~G~L~YRGY~IedLa~   78 (429)
                      |+ |++||+++++  +|||||++||+|+++|||++|+++|++||||||.||++|||+||||||++|+|+||||||+|||+
T Consensus         9 ~~-~~~~l~~~~~~~~~~~p~~~~~~g~~~~d~~~l~~~g~~t~dpGl~~t~~~eS~IT~IDG~~G~L~YRGy~I~dLa~   87 (427)
T 3msu_A            9 MS-KYATLKYADKNIEIELPVYSPSLGNDCIDVSSLVKHGIFTYDPGFMSTAACESKITYIDGGKGVLLHRGYPIEEWTQ   87 (427)
T ss_dssp             SC-CEEEEEEGGGTEEEEEEEECCSSSCEEEECGGGGGGTEEEECTTCTTEEEEEESSEEEETTTTEEEETTEEHHHHHH
T ss_pred             HC-CEEEEEECCCCEEEEEEEECCCCCCCEEEHHHHHCCCCEEECCCCCCCEEEEEECEEEECCCCEEEECCEEHHHHHC
T ss_conf             04-41699988976268722340888987357266653897865897688227987661071887289999946999864


Q ss_pred             HCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf             08989999999818799989999999988640689989999998512476525789999999875206855767878898
Q gi|254780355|r   79 KSDFLEVCYLLLHGELANVSQQKDFNDKISRHALLNENMSRFFMGFPSSAHPMAMLVSAVGALSSFYYSPSGVQDLEQCV  158 (429)
Q Consensus        79 ~~sFeEVayLLl~GeLPt~~el~~F~~~l~~~~~lpe~v~~~i~~~p~~ahPM~~L~~~vsaL~a~~~~~~~~~d~~~~~  158 (429)
                      +++|||||||||+|+|||++|+++|+..+.+++.+|+++.++++.||+++|||++|++++++|++++++..+   ++...
T Consensus        88 ~~tFEEVayLLl~GeLP~~~el~~f~~~l~~~~~lp~~~~~~~~~~p~~ahPM~~L~~~vsaL~~~~~~~~~---~~~~~  164 (427)
T 3msu_A           88 KSNYRTLCYALIYGELPTDEQVKSFRQEIINKMPVCEHVKAAIAAMPQHTHPMSSLIAGVNVLAAEHIHNGQ---KESQD  164 (427)
T ss_dssp             HCCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHHHHTTS---CCCHH
T ss_pred             CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCC---HHHHH
T ss_conf             698999999998588998799888999999837763789999983875578703677788876301245541---67789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHH
Q ss_conf             88999999999999999997279853488864246887787642898410147969999987563501367876301555
Q gi|254780355|r  159 NVSLRMIAKISTIAAMIYKYSIGQPFVYPRSDLDYASNFLHMCFSVPCAEYQVNPLLARAMNRIFILHADHEQNASTSTV  238 (429)
Q Consensus       159 ~~a~rLiA~~p~i~A~~yr~~~G~~~i~Pd~~lsyaeNfL~Ml~~~~~~~~~~~~~~~~ald~~LILhADHe~NaSTft~  238 (429)
                      +.+.|++|++|+|+|++||++.|+++++|+++++|++|||+||++. ...++++|..+++||++||||||||+||||||+
T Consensus       165 ~~a~~liA~~p~i~a~~yr~~~g~~~~~P~~~l~~~~nfl~ml~~~-~~~~~~~~~~~~aLd~~LILhADHe~NaSTfaa  243 (427)
T 3msu_A          165 EVAKNIVAKIATIAAMAYRHNHGKKFLEPKMEYGYAENFLYMMFAD-DESYKPDELHIKAMDTIFMLHADHEQNASTSTV  243 (427)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTSCHHHHHHHHHHCS-STTCCCCHHHHHHHHHHHHHHSCCSSCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC-CCCCCCCHHHHHHHHHHEEEECCCCCCHHHHHH
T ss_conf             9999988888899999999976998878852011455689997265-434799999999865224664367886167777


Q ss_pred             HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHH
Q ss_conf             54420565424677675542100222035289999986215535127999999821478614302774355554034689
Q gi|254780355|r  239 RLAGSSGADPFACIAAGVACLGGRAHGGANEEALNMLMEIGSLERIPHYIMRAKDKNDPFRIMGFGHRVYRNHDPRCRIM  318 (429)
Q Consensus       239 R~vaSt~adlysai~agi~aL~GPlHGGAne~v~~ml~~I~~~~~v~~~i~~~~~~~~~~ri~GfGHrvyk~~DPRa~~l  318 (429)
                      |||+||++|+|+||+|||++||||+||||||+|++||++|++++++++|+.+++++++++|||||||||||++||||++|
T Consensus       244 RvvaSt~ad~ysaiaAgi~aL~GplHGGA~~~v~~~l~~i~~~~~~~~~i~~~~~~~~~~~l~GFGHrvYk~~DPRa~~l  323 (427)
T 3msu_A          244 RLSGSTGNSPYAAIIAGITALWGPAHGGANEAVLKMLSEIGSTENIDKYIAKAKDKDDPFRLMGFGHRVYKNTDPRATAM  323 (427)
T ss_dssp             HHHHTTTCCHHHHHHHHHHHHTSHHHHCHHHHHHHHHHHHCSTTHHHHHHHHHHTC-----CCSBCCSSSSSCCHHHHHH
T ss_pred             HHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCHHHHH
T ss_conf             77772598577899977775158632638999999999838987899999998621156243056876688998258999


Q ss_pred             HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999988860877651799999999999611531457987784478899999849996685899999999899999999
Q gi|254780355|r  319 RETMYEVLEVTGRFNDPIAQVAIELERIALEDEYFIERKLYPNVDFYSGITLRALGFPTNLFTVLFAVARTAGWVSQWTE  398 (429)
Q Consensus       319 ~~~~~~l~~~~~~~~~~~~~~a~~le~~a~~d~~~~~r~l~pNvDfysg~i~~~lGip~~~ft~iFa~~R~~Gw~AH~~E  398 (429)
                      ++++++++++.+..++++++++.++|+++++++||++|+||||||||+|++|++||||++|||++|++||++||+|||+|
T Consensus       324 ~~~~~~l~~~~~~~~~~l~~ia~~le~~~~~~~~~~~k~l~pNVDfysg~l~~~lGip~~~~t~lFai~R~~Gw~AH~~E  403 (427)
T 3msu_A          324 KKNCEEILAKLGHSDNPLLTVAKKLEEIALQDEFFIERKLFSNVDFYSGIILKAMGIPEDMFTAIFALARTSGWISQWIE  403 (427)
T ss_dssp             HHHTHHHHHHGGGCSSHHHHHHHHHHHHHC------CCCCCBCHHHHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999982887427999999999999888746678998370779999999819686766499999999999999999


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             970789830045621058876870
Q gi|254780355|r  399 MIVDPSRRIGRPRQLYTGALKRDY  422 (429)
Q Consensus       399 q~~~~~~ri~RP~~~Y~G~~~r~y  422 (429)
                      |++++.+||+||||+||||.+|+|
T Consensus       404 q~~~~~~riiRPr~~Y~G~~~r~y  427 (427)
T 3msu_A          404 MVNDPAQKIGRPRQLYTGATNRNF  427 (427)
T ss_dssp             HHHCTTCCCCCCEEEECSCCSCCC
T ss_pred             HHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf             971868882186870169999998