RPSBLAST alignment of GI: 254780355 and protein with PDBid: 1csh
>1csh_A Citrate synthase; lyase(OXO-acid); HET: AMX; 1.65A {Gallus gallus} SCOP: a.103.1.1 PDB: 1amz_A* 1csi_A* 1csr_A* 1css_A* 1al6_A* 6csc_A* 2cts_A* 3enj_A 1cts_A 4cts_A 1csc_A* 2csc_A* 3csc_A* 4csc_A* 5csc_A 5cts_A* 6cts_A* 5csc_B Length = 435
Score = 300 bits (770), Expect = 3e-82
Identities = 104/415 (25%), Positives = 176/415 (42%), Gaps = 44/415 (10%)
Query: 38 GIFTYDPAFS---STASCKSKITFIDGNNGILLYRGYPIEQL---------SEKSDFLEV 85
G T D ++ + + +D + GI +RG+ I + E+ +
Sbjct: 32 GQITVDMSYGGMRGMKGLIYETSVLDPDEGIR-FRGFSIPECQKLLPKAGGGEEPLPEGL 90
Query: 86 CYLLLHGELANVSQQKDFNDKISRHALLNENMSRFFMGFPSSAHPMAMLVSAVGALSSFY 145
+LL+ G++ Q + + ++ A L ++ FP++ HPM+ L +A+ AL+S
Sbjct: 91 FWLLVTGQIPTPEQVSWVSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAITALNSES 150
Query: 146 YSPSGVQD-------LEQCVNVSLRMIAKISTIAAMIYKYSI--GQPFVYPRSDLDYASN 196
+ E ++ +IAK+ +AA IY+ G S LD++ N
Sbjct: 151 NFARAYAEGINRTKYWEFVYEDAMDLIAKLPCVAAKIYRNLYRAGSSIGAIDSKLDWSHN 210
Query: 197 FLHMCFSVPCAEYQVNPLLARAMNRIFILHADHE-QNASTSTVRLAGSSGADPFACIAAG 255
F +M M +H+DHE N S T L GS+ +DP+ AA
Sbjct: 211 FTNMLGYTDPQF-------TELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLSFAAA 263
Query: 256 VACLGGRAHGGANEEALNMLMEIGSLERIPHYIMRAKD-----KNDPFRIMGFGHRVYRN 310
+ L G HG AN+E L L ++ + +D N + G+GH V R
Sbjct: 264 MNGLAGPLHGLANQEVLLWLSQLQKDLGADASDEKLRDYIWNTLNSGRVVPGYGHAVLRK 323
Query: 311 HDPRCRIMRETMYEVLEVTGRFNDPIAQVAIELERIA--LEDEYFIERKLYPNVDFYSGI 368
DPR RE + L +DP+ ++ +L +I + E + +PNVD +SG+
Sbjct: 324 TDPRYTCQREFALKHL-----PSDPMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGV 378
Query: 369 TLRALGFP-TNLFTVLFAVARTAGWVSQWTEMIVDPSRRIGRPRQLYTGALKRDY 422
L+ G N +TVLF V+R G ++Q + RP+ + T L++
Sbjct: 379 LLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRAL-GFPLERPKSMSTAGLEKLS 432