RPSBLAST alignment of GI: 254780355 and protein with PDBid: 1vgm
>1vgm_A 378AA long hypothetical citrate synthase; open form, transferase; 2.00A {Sulfolobus tokodaii} Length = 378
Score = 299 bits (766), Expect = 8e-82
Identities = 130/388 (33%), Positives = 195/388 (50%), Gaps = 13/388 (3%)
Query: 41 TYDPAFSSTASCKSKITFIDGNNGILLYRGYPIEQLSEKSDFLEVCYLLLHGELANVSQQ 100
+ + +T+IDG NGIL YRGY I L + + E+ +L+L+GEL N Q
Sbjct: 4 EVSRGLENVIIKTTGLTYIDGINGILRYRGYDINDLVNYASYEELIHLMLYGELPNRQQL 63
Query: 101 KDFNDKISRHALLNENMSRFFMGFPSSAHPMAMLVSAVGALSSFYYSPSGVQDLEQCVNV 160
I+ + E + P + + M+ +A G L+S Y ++
Sbjct: 64 NQIKGIINESFEVPEQVISTIFSMPRNCDAIGMMETAFGILASIYDPKWNRATNKELAV- 122
Query: 161 SLRMIAKISTIAAMIYKYSIGQPFVYPRSDLDYASNFLHMCFSVPCAEYQVNPLLARAMN 220
++IAK +TI A IY+ G P YA +FL F + ++ +AM+
Sbjct: 123 --QIIAKTATITANIYRAKEGLKPKIPEPSESYAESFLAATFGKKPTQEEI-----KAMD 175
Query: 221 RIFILHADHEQNASTSTVRLAGSSGADPFACIAAGVACLGGRAHGGANEEALNMLMEIGS 280
IL+ DHE AST+ +A S+ +D ++CI A +A L G HGGA EEA +EIGS
Sbjct: 176 ASLILYTDHEVPASTTAALVASSTLSDMYSCIVAALAALKGPLHGGAAEEAFKQFVEIGS 235
Query: 281 LERIPHYIMRAKDKNDPFRIMGFGHRVYRNHDPRCRIMRETMYEVLEVTGRFNDPIAQVA 340
+E + K R+MGFGHRVY+ +DPR +I + E ++A
Sbjct: 236 VENADKWFEEKIIKGKS-RLMGFGHRVYKTYDPRAKIFKTLAKSFAE-KNENVKKYYEIA 293
Query: 341 IELERIALEDEYFIERKLYPNVDFYSGITLRALGFPTNLFTVLFAVARTAGWVSQWTEMI 400
+E++ + F + +YPN DFYSGI ALGFP +FT LFA++R GW++ E +
Sbjct: 294 ERIEKLG--VDTFGSKHIYPNTDFYSGIVFYALGFPIYMFTSLFALSRVLGWLAHIIEYV 351
Query: 401 VDPSRRIGRPRQLYTGALKRDYVPLEER 428
+ R+ RPR LY G KR++ P+E R
Sbjct: 352 EEQH-RLIRPRALYIGPEKREFKPIELR 378