RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= gi|254780356|ref|YP_003064769.1| hypothetical protein CLIBASIA_01205 [Candidatus Liberibacter asiaticus str. psy62] (120 letters) >2jyn_A UPF0368 protein YPL225W; novel fold, YST0336, YT51, ontario centre for structural proteomics, OCSP, PSI, protein structure initiative; NMR {Saccharomyces cerevisiae} (A:) Length = 146 Score = 26.3 bits (58), Expect = 1.6 Identities = 8/17 (47%), Positives = 10/17 (58%) Query: 86 TYFLTRMILAAIEITRN 102 T F+ R+ A EI RN Sbjct: 118 TCFVVRLQFYAFEIARN 134 >1fgj_A Hydroxylamine oxidoreductase; nitrification; HET: HEM HEC; 2.80A {Nitrosomonas europaea} (A:249-274,A:364-546) Length = 209 Score = 26.1 bits (57), Expect = 1.8 Identities = 6/31 (19%), Positives = 10/31 (32%), Gaps = 2/31 (6%) Query: 44 FWF--VYSPEIPIWGIVLSILIIAIISLRIR 72 + G +L +A+I R R Sbjct: 174 LKGTGEKISLGGLGGGMLLAGALALIGWRKR 204 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.333 0.147 0.446 Gapped Lambda K H 0.267 0.0580 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 903,492 Number of extensions: 36826 Number of successful extensions: 109 Number of sequences better than 10.0: 1 Number of HSP's gapped: 108 Number of HSP's successfully gapped: 21 Length of query: 120 Length of database: 4,956,049 Length adjustment: 72 Effective length of query: 48 Effective length of database: 2,522,089 Effective search space: 121060272 Effective search space used: 121060272 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (22.0 bits) S2: 50 (23.4 bits)