BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780357|ref|YP_003064770.1| hypothetical protein
CLIBASIA_01210 [Candidatus Liberibacter asiaticus str. psy62]
(394 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780357|ref|YP_003064770.1| hypothetical protein CLIBASIA_01210 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040034|gb|ACT56830.1| hypothetical protein CLIBASIA_01210 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 394
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/394 (100%), Positives = 394/394 (100%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY
Sbjct: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP
Sbjct: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF
Sbjct: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL
Sbjct: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS
Sbjct: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL
Sbjct: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
EITIIPPSNDNDKVKFIIKSAIENLHFPWTKHRI
Sbjct: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
>gi|190891621|ref|YP_001978163.1| hypothetical protein RHECIAT_CH0002024 [Rhizobium etli CIAT 652]
gi|190696900|gb|ACE90985.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 820
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 173/318 (54%), Gaps = 23/318 (7%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G S ++F I+HFH + YGL AN+ +PI+SF+V+PAGL+A+LLM LD + V+ +
Sbjct: 488 GGFSTALFSIEHFHRLTAYGLPANLATMPIISFIVMPAGLLAMLLMPFGLDAPLWTVVGF 547
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
GLD++I +A +S + GR+P FV V FLL+ +T +RH G+ ++ + +I
Sbjct: 548 GLDLVIAVAKTVSGWGGDIGFGRLPGWYFVVAVAGFLLLTLLRTRLRHAGTSILAVATLI 607
Query: 212 LFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHV-- 269
L P S PDL+ISE G LV LV + SN NPP FIF QW+ AL+ P H P +
Sbjct: 608 LLILPGSPPPDLVISEDGGLVGLVAATAMASNRENPPDFIFDQWQRALVLPTHHPPKMLD 667
Query: 270 ------QKEDL--------QEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVL 315
Q ED Q + ++++ + +F C+KK++C+ + +V V+
Sbjct: 668 GPAIPPQGEDRRVKLSRDQQNEARTAMVAAAAGGEANRFSCVKKAWCIARLGNGNVVAVI 727
Query: 316 KRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVK 375
+ +C +I++T++R + + + L T E L++ GS+E+ + ++
Sbjct: 728 DNAAYLGPACDAGEIVVTSVRLRFDRCRSGATLFTGETLRRTGSVELRFVQTGHE----- 782
Query: 376 FIIKSAIENLHFPWTKHR 393
I +A + L PW +HR
Sbjct: 783 --IATAFDALSRPWMRHR 798
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 4 ITKKYD-PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI--- 59
I + D PF I G ARL+PP+GPA PGL DF+F +Y+ GI A G+FY P+ +
Sbjct: 203 IARGADMPFEIGDIITGRARLTPPAGPALPGLNDFSFGAYFDGIGANGFFYRAPEKVDLQ 262
Query: 60 -------YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
+S++ W ++ S I + + + G + +A
Sbjct: 263 AGPPAVTSTSDALLEWLYRLRSGIGDRIRSMLPGDTGAFAAA 304
>gi|86357548|ref|YP_469440.1| hypothetical protein RHE_CH01927 [Rhizobium etli CFN 42]
gi|86281650|gb|ABC90713.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 848
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 172/317 (54%), Gaps = 22/317 (6%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G S ++F I+HFH + YGL AN+ +PI+SF+V+PAGL+A+LLM LD +P+ V+ +
Sbjct: 517 GGFSTALFSIEHFHRLTAYGLPANLATMPIISFIVMPAGLLAMLLMPFGLDTLPWKVVGF 576
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
GLD++I +A IS IGR+P F V FLLM +T +RH+G+ +I ++ +
Sbjct: 577 GLDLVIAVAKTISGWGGNIDIGRLPGWYFSVAVAGFLLMSLLRTRLRHVGTALIAVSTVT 636
Query: 212 LFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFH------E 265
+ P S P L+ISE G LVA+V L SN P FIFSQW+ AL+ P H +
Sbjct: 637 VLVLPASRPPHLVISEDGALVAVVATAALASNRERPSDFIFSQWQRALVLPTHHPPKMLD 696
Query: 266 APHVQKE---------DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLK 316
P V +E + Q + + +++ + +F C+KK++C + +V V++
Sbjct: 697 GPAVPEEKDRRLRLSREQQNEARIAIRTAAAEGEAERFSCVKKAWCTARLANGHVVTVIE 756
Query: 317 RKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKF 376
+ +C DI++T++R + + L T E L++ GSLE+ +
Sbjct: 757 NAAYLGPACDAGDIVVTSVRLRFASCRSGAALFTGETLRRTGSLELRFADSGLE------ 810
Query: 377 IIKSAIENLHFPWTKHR 393
+ +A + L PW +HR
Sbjct: 811 -VTTAFDALSRPWKRHR 826
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 4 ITKKYD-PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
I + D PF I G ARL+PP+GPA P L DF+F +Y+ GI A G+FY P +
Sbjct: 232 IARGADAPFEIGDIITGRARLTPPAGPALPALNDFSFGAYFDGIGANGFFYGAPTKLDPQ 291
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIG 89
W + +++ L +R+ IG
Sbjct: 292 VEPPGARWTSDALLER--LYRLRSGIG 316
>gi|327189235|gb|EGE56414.1| hypothetical protein RHECNPAF_70025 [Rhizobium etli CNPAF512]
Length = 820
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 172/318 (54%), Gaps = 23/318 (7%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G S ++F I+HFH + YGL AN+ +PI+SF+V+PAGL+A+LLM LD + V+ +
Sbjct: 488 GGFSTALFSIEHFHRLTAYGLPANLATMPIISFIVMPAGLLAMLLMPFGLDAPLWTVVGF 547
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
GLD++I +A +S + GR+P FV V FLL+ +T +R G+ ++ + +I
Sbjct: 548 GLDLVIAVAKTVSGWGGDIGFGRLPGWYFVVAVAGFLLLTLLRTRLRQAGTSILAVATLI 607
Query: 212 LFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHV-- 269
L P S PDL+ISE G LV LV + SN NPP FIF QW+ AL+ P H P +
Sbjct: 608 LLILPGSRPPDLVISEDGGLVGLVAATAMASNRENPPDFIFDQWQRALVLPTHHPPKMLD 667
Query: 270 ------QKEDL--------QEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVL 315
Q ED Q + ++++ + +F C+KK++C+ + +V V+
Sbjct: 668 GPAIPPQGEDRRVKLSRDQQNEARTAMVAAAAGGEANRFSCVKKAWCIARLGNGHVVAVI 727
Query: 316 KRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVK 375
+ +C++ +I++T++R + + + L T E L++ GS+E+ +
Sbjct: 728 DNAAYLGPACEVGEIVVTSVRLRFDRCRSGATLFTGETLRRTGSVELRFA-------QTG 780
Query: 376 FIIKSAIENLHFPWTKHR 393
I +A + L PW +HR
Sbjct: 781 LEIATAFDALSRPWMRHR 798
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 4 ITKKYD-PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI--- 59
I + D PF I G ARL+PP+GPA PGL DF+F +Y+ GI A G+FY P+ +
Sbjct: 203 IARGADMPFEIGDIITGRARLTPPAGPALPGLNDFSFGAYFDGIGANGFFYGAPEKVDLQ 262
Query: 60 -------YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
+S++ W ++ S I + + + G + +A
Sbjct: 263 AGPPAVTSTSDALLEWLYRLRSGIGDRIRSILPGDTGAFAAA 304
>gi|218463027|ref|ZP_03503118.1| hypothetical protein RetlK5_27913 [Rhizobium etli Kim 5]
Length = 527
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 173/318 (54%), Gaps = 23/318 (7%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G S ++F ++HFH + YGL AN+ +PI+SF+V+PAGL+A+LLM LD + V+ +
Sbjct: 195 GGFSTALFAVEHFHRLTAYGLPANLATMPIISFIVMPAGLLAMLLMPFGLDAPLWTVVGF 254
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
GLD++I +A +S + +GR+P F V FLL+ +T +RH G+ ++ ++ +I
Sbjct: 255 GLDLVIAVAKTVSAWGGDIDLGRLPAWYFAVAVAGFLLLTLLRTRLRHAGTSILAVSTLI 314
Query: 212 LFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHV-- 269
+ P S PDL+ISE G LVALV + SN NPP FIF QW+ AL+ P H P +
Sbjct: 315 VLILPGSRPPDLVISEDGGLVALVATAAMASNRENPPDFIFDQWQRALVLPTHHPPKMLD 374
Query: 270 ------QKEDLQ---EKNQSS-----LKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVL 315
Q ED + ++Q + + + +F C+KK++C+ + +V V+
Sbjct: 375 GPAIPPQGEDRRLRLSRDQQNEARTAMMAAAAGGEANRFSCVKKAWCIARLGNGHVVAVI 434
Query: 316 KRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVK 375
+ +C S+I++T +R + + + L T E L++ GS+E+ +
Sbjct: 435 DNAAYLGPACDASEIVVTAVRLRFDRCHSGATLFTGETLRRTGSVELRFAQTGPE----- 489
Query: 376 FIIKSAIENLHFPWTKHR 393
+ +A + L PW +HR
Sbjct: 490 --VATAFDTLSRPWMRHR 505
>gi|209549196|ref|YP_002281113.1| ComEC/Rec2-related protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209534952|gb|ACI54887.1| ComEC/Rec2-related protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 810
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/318 (31%), Positives = 169/318 (53%), Gaps = 23/318 (7%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G S ++F I+HFH + YGL AN+ +PI+SF+V+PAGL+A+LLM LD + V+ +
Sbjct: 478 GGFSTALFSIEHFHRLTAYGLPANLATMPIISFIVMPAGLLAMLLMPFGLDTPLWKVVGF 537
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
GLD++I +A +S + +GR+P F V FLL+ +T +RH G+ ++ ++ ++
Sbjct: 538 GLDLVIAVAKTVSGWGGDIGVGRLPAWYFAVAVAGFLLLTLLRTRLRHAGTSILAVSTLL 597
Query: 212 LFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHV-- 269
+ P PDL+ISE G LVALV+ + SN NPP FIF QW+ AL+ P H P +
Sbjct: 598 VLILPVPRPPDLVISEDGGLVALVETAAMASNRENPPDFIFDQWQRALVLPTHHPPKMLD 657
Query: 270 ------QKEDL--------QEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVL 315
ED Q + +++++ + +F C+KK++C + +V ++
Sbjct: 658 GPAIPPGGEDRRVRLSREQQNEARTAMRAAAAGGETNRFSCVKKAWCTSRLGNGRVVTII 717
Query: 316 KRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVK 375
+ +C +DI++T +R + + L T E L++ GS+E+
Sbjct: 718 DNAAYLGPACDSADIVVTPVRLRFNSCRSGATLFTGETLRRTGSVELRFA-------DAG 770
Query: 376 FIIKSAIENLHFPWTKHR 393
+ +A E L PW + R
Sbjct: 771 LEVATAFETLSRPWMRQR 788
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
Query: 3 SITKKYD-PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI-- 59
+I + D PF + G ARL+PP+GPA P L DF+FS+Y+ GI A G+FY P+ +
Sbjct: 192 AIVRGADTPFEIGDIVTGRARLTPPAGPALPELNDFSFSAYFDGIGANGFFYGAPERVDL 251
Query: 60 --------YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
+SE+ W ++ S I + + + G + +A
Sbjct: 252 QAGPQPARSTSETMLEWLYQLRSRIGDRIRSILPGDTGAFAAA 294
>gi|116251991|ref|YP_767829.1| transmembrane DNA uptake competence-related protein [Rhizobium
leguminosarum bv. viciae 3841]
gi|115256639|emb|CAK07727.1| putative transmembrane DNA uptake competence-related protein
[Rhizobium leguminosarum bv. viciae 3841]
Length = 830
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 173/318 (54%), Gaps = 23/318 (7%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G S ++F I+HFH + YGL AN+ +PI+SF+++PAGL+A+LLM LD +P+ V+ +
Sbjct: 498 GGLSTALFSIEHFHRLTAYGLPANLATMPIISFIIMPAGLLAMLLMPFGLDVLPWKVVGF 557
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
GLD++I +A +S +GR+P F V FLL+ +T +RH+G+ +I + +I
Sbjct: 558 GLDLVIAVAKTVSGWDGNIDVGRLPAWYFAVAVAGFLLLTLLRTRLRHVGTSIIAVATLI 617
Query: 212 LFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHV-- 269
L P PDL+ISE G+LVA+V+ + SN PP FIF QW+ AL+ P H+ P +
Sbjct: 618 LLLLPGPRPPDLVISEDGSLVAVVEAAAMASNRERPPDFIFDQWQRALVLPRHDPPKMLD 677
Query: 270 --------------QKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVL 315
D Q + +++++ + +F C+KK++C+ + +V V+
Sbjct: 678 GPAISPEGEDRRVRLSRDQQNEARTAMRTATAAGDTNRFSCVKKAWCISRLGNGQVVTVI 737
Query: 316 KRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVK 375
+ +C +DI++T++R + + L T E L++ GS+E+
Sbjct: 738 DNAAYLGPACDAADIVVTSVRLRFNSCRSGATLFTGETLRRTGSIELRFT-------DTG 790
Query: 376 FIIKSAIENLHFPWTKHR 393
+ +A + L PW +HR
Sbjct: 791 LEVATAFDALSRPWMRHR 808
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%)
Query: 17 IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
I G ARL+PP+GPA P L DF+F +Y+ GI A G+FY P +
Sbjct: 227 ITGRARLTPPAGPALPELNDFSFGAYFDGIGANGFFYGAPTKV 269
>gi|150396364|ref|YP_001326831.1| ComEC/Rec2-like protein [Sinorhizobium medicae WSM419]
gi|150027879|gb|ABR59996.1| ComEC/Rec2-related protein [Sinorhizobium medicae WSM419]
Length = 799
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 158/305 (51%), Gaps = 9/305 (2%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G + +++ HF+ +P YGL+AN+L P+ S +++P L A+LLM L++ P +M
Sbjct: 485 GGMATAVYAAAHFNRLPAYGLVANVLTTPLTSVLIMPFALFAMLLMPFGLEHYPLVIMGQ 544
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
GLD ++ +A ++ E+ GR+ + F I + L+ +T + G+ ++ + + +
Sbjct: 545 GLDWMMAVARYVAALDGEWTTGRMADGPFFLIALGGTLLCVLRTRLALGGAGLVALGVCV 604
Query: 212 LFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
+ P P ++ISE LV LV + + +N S PP FIFSQW+ AL H P
Sbjct: 605 IALDPREERPSIVISEDAQLVGLVTADAIATNRSRPPEFIFSQWRRALAVSEHAVPL--- 661
Query: 272 EDLQEKNQSSL--KEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSD 329
DL S + +L S + F C K + CVG R V ++++ +++ L C +D
Sbjct: 662 -DLPVYAGSDVDTAALLASAKVGVFTCRKGTGCVGRSREGWTVAIVEKAELVPLLCGHAD 720
Query: 330 -ILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFP 388
+++ + R + SL+I+ L++ GS+EI +P + +++ + + + P
Sbjct: 721 LVVVASRRPVAACPPGASLIISTRTLRRTGSVEIHAVPEQAGSPRMQVV--GSFSSTERP 778
Query: 389 WTKHR 393
W +HR
Sbjct: 779 WQRHR 783
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
+++PF IEG ARLSPPSGPA PGL DF F +Y KG+ A+G+FY P+ + + S
Sbjct: 204 RHEPFAIGAIIEGKARLSPPSGPALPGLNDFAFGAYVKGLGAVGFFYGAPRALAGAASGR 263
Query: 67 TWTWKKISSIKQSFLNEIRANIG 89
+ ++L +R IG
Sbjct: 264 DIAETSLGERAAAYLAPVREAIG 286
>gi|163760897|ref|ZP_02167976.1| hypothetical protein HPDFL43_07122 [Hoeflea phototrophica DFL-43]
gi|162281941|gb|EDQ32233.1| hypothetical protein HPDFL43_07122 [Hoeflea phototrophica DFL-43]
Length = 809
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 162/312 (51%), Gaps = 15/312 (4%)
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
+ +F HFH GL+AN+LA+P+++ VV+PAGL+A+LLM LD +P M GL
Sbjct: 487 ATGLFSAHHFHRFAGNGLLANMLAMPLVTLVVMPAGLLAMLLMPFCLDQLPLQAMGAGLG 546
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
+I +AH I + +G+IP + F+++VF ++ +R G ++G+ ++
Sbjct: 547 GVIAVAHYIDGMGGDVLVGQIPFHATAVAGAGFIVLVFLRSRLRLAGFALLGLGALLALP 606
Query: 215 FPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDL 274
P +LISE G LV L L SN P +F+F QW++AL P H P +++ L
Sbjct: 607 PLAPNRPQILISEDGRLVGLYGATGLASNAKRPSAFVFGQWQTALGGPNHRTPAMRRP-L 665
Query: 275 QEKNQ---SSLKEILR--SMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSD 329
NQ +L +L+ + +P +F C ++ C H I+ + ++I +C +D
Sbjct: 666 VSDNQLPGETLTPLLQAAAQEPSRFHCAERGMCAAGHAGATIIAI-DHPELIGPACDRAD 724
Query: 330 ILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIP---PSNDNDKV-----KFIIKSA 381
+++ +I ++ + + L+T L+ G+L I + P+ D+ +F I SA
Sbjct: 725 LVVVSIPVYMSRCRSGATLVTARSLRTTGALAIRMAQNRLPTAAQDRGSGTRPRFAIDSA 784
Query: 382 IENLHFPWTKHR 393
++ + PWT R
Sbjct: 785 LQGVVRPWTIQR 796
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
++P P I G ARLS PSGP PG +DF F ++ GI A G+F+ P+ +
Sbjct: 202 HEPVPVGAMIAGRARLSSPSGPVLPGGYDFAFRAFVDGIGAHGFFFQAPEKL 253
>gi|241204518|ref|YP_002975614.1| ComEC/Rec2-related protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240858408|gb|ACS56075.1| ComEC/Rec2-related protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 754
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 173/318 (54%), Gaps = 23/318 (7%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G S ++F I+HFH + YGL AN+ +PI+SF+V+PAGL+A+LLM LD +P+ V+ +
Sbjct: 422 GGFSTALFSIEHFHRLTAYGLPANLATMPIISFIVMPAGLLAMLLMPFGLDVLPWKVVGF 481
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
GLD++I +A +S +GR+P F V FLL+ +T +RHIG+ +I + +I
Sbjct: 482 GLDLVIAVAKTVSGWDGNIDVGRLPAWYFAVAVAGFLLLTLLRTRLRHIGTSIIAVATLI 541
Query: 212 LFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
L P PDL+ISE G+LVA+V+ + SN PP FIF QW+ AL+ P H+ P +
Sbjct: 542 LLLLPVPRPPDLVISEDGSLVAVVEAAAMASNRERPPDFIFDQWQRALVLPRHDPPKMLD 601
Query: 272 ----------------EDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVL 315
D Q + +++++ + + +F C+K+++C + +V V+
Sbjct: 602 GPAIPQVGEDRRVKLSRDQQNEARTAMRAAAAAGEANRFSCVKRAWCASRLGNGRVVAVI 661
Query: 316 KRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVK 375
+ +C +DI++T++R + + L T E L++ GS+E+
Sbjct: 662 DNAAYLGPACDAADIIVTSVRLRFNSCRSGATLFTGETLRRTGSIELRFA-------DAG 714
Query: 376 FIIKSAIENLHFPWTKHR 393
+ +A + L PW +HR
Sbjct: 715 LEVATAFDALSRPWMRHR 732
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 17 IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
I G ARL+PP+GPA P L DF+FS+Y+ GI A G+FY P +
Sbjct: 151 ITGRARLTPPAGPALPELNDFSFSAYFDGIGANGFFYGAPTKV 193
>gi|15965263|ref|NP_385616.1| hypothetical protein SMc02086 [Sinorhizobium meliloti 1021]
gi|307309286|ref|ZP_07588954.1| ComEC/Rec2-related protein [Sinorhizobium meliloti BL225C]
gi|15074443|emb|CAC46089.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306900287|gb|EFN30904.1| ComEC/Rec2-related protein [Sinorhizobium meliloti BL225C]
Length = 801
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 150/306 (49%), Gaps = 10/306 (3%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G + +++ HF+ +P YGL AN+L P++S +++P L A+LLM L+ P VM
Sbjct: 486 GGLATAVYAAAHFNRLPGYGLAANVLTTPLISVLIMPFALFAMLLMPFGLEYYPLVVMGQ 545
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
GLD ++ +A ++ E+ GR+ + F I +L+ +T + +G+ +I + +
Sbjct: 546 GLDWMLTVARYVASLDGEWTTGRMGDVQFFLIAFGGILLCVLRTRLALVGAGLIALGVCA 605
Query: 212 LFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
+ P P + ISE LV L+ + + +N S PP FIFSQW+ AL H+AP
Sbjct: 606 IALEPQKERPSIAISEDAQLVGLITADAIATNRSRPPEFIFSQWQRALAIAAHKAP---- 661
Query: 272 EDL--QEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSD 329
DL + + L S + F C K + C G R V V+++ + + C D
Sbjct: 662 VDLAAEPDTAAGTAAFLTSARAGVFACRKGTGCAGRSREGWTVAVIEKAESLSFLCGRVD 721
Query: 330 ILITTIRDINTKLC--NVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHF 387
+++ R + C SL+I+ E L++ G++EI + + S+ +
Sbjct: 722 LVVVASRRPSAG-CPPGGSLVISTETLRRTGAVEIH-AEQEQPGAPPRMRVVSSFSSTER 779
Query: 388 PWTKHR 393
PW +HR
Sbjct: 780 PWQRHR 785
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
+++ FP TIEG ARLSPPSGPA PGL DF F +Y+KG+ A+GYFY P+ + +
Sbjct: 205 RHEAFPVGATIEGKARLSPPSGPALPGLNDFAFGAYFKGVGAVGYFYGAPRAPVDAGAVT 264
Query: 67 TWTWKKISSIKQSFLNEIRANIG 89
+ + + ++L +R IG
Sbjct: 265 DRSQASLPAKAAAYLALVREAIG 287
>gi|307317027|ref|ZP_07596468.1| ComEC/Rec2-related protein [Sinorhizobium meliloti AK83]
gi|306897115|gb|EFN27860.1| ComEC/Rec2-related protein [Sinorhizobium meliloti AK83]
Length = 801
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 149/306 (48%), Gaps = 10/306 (3%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G + +++ HF+ +P YGL AN+L P++S +++P L A+LLM L+ P VM
Sbjct: 486 GGLATAVYAAAHFNRLPGYGLAANVLTTPLISVLIMPFALFAMLLMPFGLEYYPLVVMGQ 545
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
GLD ++ +A ++ E+ GR+ + F I +L+ +T + +G+ +I +
Sbjct: 546 GLDWMLAVARYVASLDGEWTTGRMGDVQFFLIAFGGILLCVLRTRLALVGAGLIALGASA 605
Query: 212 LFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
+ P P + ISE LV LV + + +N S PP FIFSQW+ AL H+AP
Sbjct: 606 IVLEPRKERPSIAISEDAQLVGLVAADAIATNRSRPPEFIFSQWQRALAIAAHKAP---- 661
Query: 272 EDL--QEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSD 329
DL + + L S + F C K + C G R V V+++ + + C D
Sbjct: 662 VDLAAEPDTAAGTSAFLTSARAGVFACRKGTGCAGRSREGWTVAVIEKAESLSFLCGRVD 721
Query: 330 ILITTIRDINTKLC--NVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHF 387
+++ R + C SL+I+ E L++ G++EI + + S+ +
Sbjct: 722 LVVVASRRPSAG-CPPGGSLVISTETLRRTGAVEIH-AEQEQPGAAPRMRVVSSFSSTER 779
Query: 388 PWTKHR 393
PW +HR
Sbjct: 780 PWQRHR 785
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
+++ FP TIEG ARLSPPSGPA PGL DF F +Y+KG+ A+GYFY P+ + +
Sbjct: 205 RHEAFPVGATIEGKARLSPPSGPALPGLNDFAFGAYFKGVGAVGYFYGAPRAPVDAGAVT 264
Query: 67 TWTWKKISSIKQSFLNEIRANIG 89
+ + + ++L +R IG
Sbjct: 265 DRSQASLPAKAAAYLALVREAIG 287
>gi|227821911|ref|YP_002825881.1| DNA uptake protein [Sinorhizobium fredii NGR234]
gi|227340910|gb|ACP25128.1| DNA uptake protein [Sinorhizobium fredii NGR234]
Length = 815
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 160/326 (49%), Gaps = 30/326 (9%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G + +++ HFH +P YGL+AN+L P++ +++P GL A+LLM L++ P VM
Sbjct: 480 GGLATAVYAAAHFHRLPAYGLLANVLTTPLIGILIMPFGLFAMLLMPFGLEHYPLMVMGQ 539
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS--IMIGITI 209
GLD ++ +A ++ E+ GRI T F + +L+ +T + +G+ I++G +
Sbjct: 540 GLDWMLGVARYVATLDGEWVTGRIGVTGFFLLAFGGVLLCVLRTRLAFLGAALILLGGSS 599
Query: 210 IILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP-- 267
I L + P + ISE G LV L+ + + +N S PP FIFSQW+ AL H AP
Sbjct: 600 IALER--QAVRPSITISEDGQLVGLIVGDAIGTNKSRPPEFIFSQWRRALALDSHVAPVE 657
Query: 268 ----HVQKEDLQEK---NQSSLKEI------------LRSMQPRKFLCIKKSFCVGCHRS 308
D++ + N + + + L + +P F C K +CVG R
Sbjct: 658 TAAGGRSTNDVERRPPRNSAGTQPVDARASAAEAATALTAAKPGNFSCRKGEWCVGRSRE 717
Query: 309 DVIVGVLKRKDMIRLSCQLSDILI-TTIRDINTKLCNVSLLITPEILQKQGSLEITIIPP 367
V V+ ++ + C D+LI T R + SL++T L++ G++EI
Sbjct: 718 GWAVAVVDVPEVFAVLCGRVDLLIAATRRTLPACSSGKSLVVTGATLRQTGAIEIY---- 773
Query: 368 SNDNDKVKFIIKSAIENLHFPWTKHR 393
++ + I ++ + PW +HR
Sbjct: 774 ADAAAPERMRIVTSFPSTQRPWQRHR 799
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
+++PFP + IEG RLSPPSGPA PGL DF F +Y+KG+ A+G+FY P+ +
Sbjct: 206 RHEPFPIGSAIEGKVRLSPPSGPALPGLNDFAFDAYFKGVGAVGFFYGAPRRPGEGDGSL 265
Query: 67 TWTWK---KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCI 107
+ + + ++++++++ N IR+ IG A A+ + I
Sbjct: 266 SLSLQMAARLAALRETVGNRIRSAIGGDTGAIAAALVTGEERAI 309
>gi|159184742|ref|NP_354400.2| hypothetical protein Atu1393 [Agrobacterium tumefaciens str. C58]
gi|159140030|gb|AAK87185.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 809
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 155/322 (48%), Gaps = 24/322 (7%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G S +I+ ++HF + YGL AN+ A+P++S VV+P GLIA+LLM LD VM +
Sbjct: 467 GGLSTAIYSVEHFQRVTTYGLFANLAAMPLMSLVVMPFGLIAMLLMPFGLDAPFLKVMGY 526
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV-VEFLLMVFCKTNIRHIGSIMIGITII 210
G+ ++I +A ++ GR P F+ + V FLL+ +T + +G + +
Sbjct: 527 GMALVIEVAQEVASWGGSAATGR-PHGWFIGVASVGFLLLTLLRTRLALLGVPPLLLAFG 585
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITP-------- 262
+ PDLLI E+G LVAL+D+ + + + P FI+ QW+ AL+ P
Sbjct: 586 LSGAVAQRSLPDLLIHEEGKLVALLDEGRVYTTKTRPQGFIYEQWQRALLLPEKPLSPVL 645
Query: 263 -----------FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVI 311
+ ED++ + + LR P F C +C +S
Sbjct: 646 LKTGVPATTIALSAKSKLAPEDMKAVAR-EMVTTLRDAAPGVFTCRTGIWCAARAKSGEF 704
Query: 312 VGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDN 371
+ VL+ +C ++DI+I + R T+ + +LL+ +IL++ GS+EI +D
Sbjct: 705 IIVLEDGRFAGKACDIADIVIVSRRTSFTQCRSGALLLNRDILRRIGSVEINF--AGSDQ 762
Query: 372 DKVKFIIKSAIENLHFPWTKHR 393
V +++A PW+ HR
Sbjct: 763 AGVVGRMRAATAGTDRPWSDHR 784
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS--ESHN 66
+P TI G ARLS PSGPA PGL DF F+SY+KGI A G+FY P+ + + ++
Sbjct: 186 EPAALGATIRGKARLSLPSGPALPGLNDFAFASYFKGIGATGFFYKPPQTVTAPDIDAKK 245
Query: 67 TW-TWK--KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCI 107
W W ++ ++ + IR IG A A+ + I
Sbjct: 246 DWLEWADMRLYGLRTAIAERIRNTIGGDAGAFAASIVTDERQAI 289
>gi|325292751|ref|YP_004278615.1| ComEC/Rec2-related protein [Agrobacterium sp. H13-3]
gi|325060604|gb|ADY64295.1| ComEC/Rec2-related protein [Agrobacterium sp. H13-3]
Length = 826
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 167/344 (48%), Gaps = 23/344 (6%)
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
W K++ + + + + G S +I+ +HFH + YGL AN+ A+P++S +V+P
Sbjct: 462 AWLKVAGMMGAVIGGV-ITTSLIGGLSTAIYSAEHFHRVTTYGLFANLAAMPLMSLIVMP 520
Query: 129 AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV-VEF 187
L+A+LLM LD +M +G+ ++I +A+ ++ GR P F+ + V F
Sbjct: 521 FALLAMLLMPFGLDAPFLKIMGYGMALVIEVANEVASWGGSAATGR-PHGWFIGLASVGF 579
Query: 188 LLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNP 247
LL+ ++ + +G + + Y PDLLI E G LVAL++ + + + P
Sbjct: 580 LLLTLLRSRLALLGIPFLLFAFGVSAVTAYRDLPDLLIHEDGELVALLEDGKVSTTKARP 639
Query: 248 PSFIFSQWKSALITPFHEAP--HVQKEDLQEKNQSS-------------LKEILRSMQPR 292
SF++ QW+ AL+ P P + E S ++E+ +++
Sbjct: 640 QSFVYGQWQRALLLPEKTVPPGFINGESTANTAGSDSRSKLSPEDMAVVVREMTAALKDA 699
Query: 293 K---FLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLI 349
K F C K +CV S + VL+ +C ++DI++ + R ++ + +LL+
Sbjct: 700 KAGVFTCRKDIWCVASAASGEWIVVLEDGRFAGKACDIADIVVVSRRTSFSQCRSGALLL 759
Query: 350 TPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
+ +IL++ GS+EI + V +++AI PW++HR
Sbjct: 760 SRDILRRLGSVEIDF--ADKREEGVASGLRAAIAGTDRPWSQHR 801
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS------- 61
+P T+ G RLSPPSGPA PGL DF F+SY+KGI A G+FY P+ + S
Sbjct: 201 EPIALGATLRGKVRLSPPSGPALPGLNDFAFTSYFKGIGATGFFYKSPQALVSPVGDARP 260
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCI 107
+ W ++ ++ + IR IG A A+ + I
Sbjct: 261 DKGWLEWADMRLYGLRSAIAERIRTTIGGDAGAFAASIITDERQAI 306
>gi|222148889|ref|YP_002549846.1| hypothetical protein Avi_2562 [Agrobacterium vitis S4]
gi|221735875|gb|ACM36838.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 1007
Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 139/307 (45%), Gaps = 64/307 (20%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G S ++F HFH + ++GL AN+LA P++S +V+PA +I +LLM LD P +M
Sbjct: 498 GGFSTAMFSAAHFHRVGLHGLEANLLAAPLMSMLVMPAAMIGVLLMPFGLDQWPIQLMGL 557
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTI-VVEFLLMVFCKTNIRHIGSIMIGITII 210
GL+ ++ IA +++ N F GR E F+ + L++ KT +R IG M
Sbjct: 558 GLEGVLMIASKVASWGNGFTFGRF-EWWFLPVSATGLLILTLMKTRLRLIGVAM------ 610
Query: 211 ILFTFPYSF------SPDLLISEKGNLVALVDKN-----TLISNYSNPPSFIFSQWKSAL 259
+L F Y PDL ISE G L AL + T+ +N PPSFIF+QW+S L
Sbjct: 611 MLTAFGYEAIKTDPPLPDLAISEDGQLFALFRTDDRHLLTIATNKKRPPSFIFNQWRSVL 670
Query: 260 ITPFHEAPH-------VQKEDLQE---KNQSSLKEILRS--------------------- 288
AP V+ E Q+ K + +E R+
Sbjct: 671 DIADPIAPEILPKLAAVEIETGQQGAGKGEDKARETTRAGKTKTGGQKVKGREPVEPQQA 730
Query: 289 ------------MQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTI- 335
+P F C +FC+ + V +++ +D + +C LSD++++T
Sbjct: 731 MAEMTTAKEKADKKPDLFHCRTDAFCLARLSNGWTVSLVQNRDYNQAACALSDLIVSTEA 790
Query: 336 -RDINTK 341
RD K
Sbjct: 791 GRDAECK 797
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 36/51 (70%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPK 57
K+ PF IEG ARLSPPSGPA PGL DF F+SY+ G AIGYFY PK
Sbjct: 214 KHVPFNPGDWIEGRARLSPPSGPALPGLNDFAFASYFAGTGAIGYFYQPPK 264
>gi|49474278|ref|YP_032320.1| DNA uptake protein [Bartonella quintana str. Toulouse]
gi|49239782|emb|CAF26172.1| DNA uptake protein [Bartonella quintana str. Toulouse]
Length = 752
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 142/313 (45%), Gaps = 54/313 (17%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
A++ ++ HF I G+I+N LA+P++S ++IP GLIA+ M LSL+ +P +M
Sbjct: 481 AGAASGVYAAYHFSNIAFLGVISNALALPVISILIIPFGLIAVFAMFLSLEWLPLQIMGL 540
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS--IMIGITI 209
G+D++I IAH + G +P ++ V + ++FCKT+IR S I++GI I
Sbjct: 541 GVDLVIKIAHAVRAVSPALNPGFMPLSALVFFSGGLVGLIFCKTSIRFFFSLFILVGICI 600
Query: 210 IILFTFPYSFSP-DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSAL-----ITPF 263
++ SP L+I++ NLV +++ L ++ F S W+ + I P
Sbjct: 601 CLM------HSPVQLIIADNINLVGVINGKKLYTDRYRISKFTTSIWEKSFRVNETIKPT 654
Query: 264 HEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRK-DMIR 322
P + F+C C + V VL K D
Sbjct: 655 KYGPSFNGQ---------------------FVC-DDHICSSLSENGFRVVVLHGKID--- 689
Query: 323 LSCQLSDILITTIRDINTKLCN--VSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKS 380
C +D+++ T +N + CN + TP+ L +GS+ +T K II S
Sbjct: 690 -QCVEADVIVKTF-TMNDQTCNRKTQITFTPQQLLSRGSVMMT---------KRGDIIWS 738
Query: 381 AIENLHFPWTKHR 393
+ + H PW HR
Sbjct: 739 S-KGFHRPWNMHR 750
Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT--WKKISSI 76
G ++ SGP PG +DF+F +Y+KGI A G + P I + + +KI ++
Sbjct: 214 GKVKIRALSGPVRPGGYDFSFHNYFKGIGAQGIYLGKPMKISVPPPYTMLSILLQKIENL 273
Query: 77 KQSFLNEIRANIG-TYGSASASI 98
+ + +IR IG GS +A++
Sbjct: 274 RMNMTQKIRMAIGEEKGSVAAAL 296
>gi|218506605|ref|ZP_03504483.1| hypothetical protein RetlB5_02844 [Rhizobium etli Brasil 5]
Length = 186
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 90/174 (51%), Gaps = 16/174 (9%)
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFH 264
+ + +IL P S PDL+ISE G LV LV + SN NPP FIF QW+ AL+ P H
Sbjct: 1 LAVATLILLILPGSRPPDLVISEDGGLVGLVAATAMASNRENPPDFIFDQWQRALVLPTH 60
Query: 265 EAPHV--------QKEDL--------QEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRS 308
P + Q ED Q + ++++ + +F C+KK++C+ +
Sbjct: 61 HPPKMLDGPAIPPQGEDRRVKLSRDQQNEARTAMVAAAAGGEANRFSCVKKAWCIARLGN 120
Query: 309 DVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEI 362
+V V+ + +C++ +I++T++R + + + L T E L++ GS+E+
Sbjct: 121 GHVVAVIDNAAYLGPACEVGEIVVTSVRLRFDRCRSGASLFTGETLRRTGSVEL 174
>gi|304391661|ref|ZP_07373603.1| DNA uptake protein [Ahrensia sp. R2A130]
gi|303295890|gb|EFL90248.1| DNA uptake protein [Ahrensia sp. R2A130]
Length = 761
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 137/309 (44%), Gaps = 43/309 (13%)
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
+ IF HF + GL+AN+ A+P++SF V+P L+++L + L + P MAW +
Sbjct: 481 ATGIFAAYHFQRVAPLGLLANLAAMPVVSFAVMPLALLSMLALPFGLQDWPLAAMAWSTE 540
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
++ +A+ +S + GRIP +SF+ L+M ++ ++ G + +++ T
Sbjct: 541 WVVAVANSVSDMGPQGITGRIPVSSFICATAGLLIMTLARSKLKLFGLAFLLPAVLLAQT 600
Query: 215 FPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS-FIFSQWKSALITPFHEA---PHVQ 270
+ P +LISE G +A++ ++T S S FI W++A P ++A PH
Sbjct: 601 ---TKMPAILISEDGRQIAILSESTEPSLLRERGSRFITEIWQTAY--PPNQADGTPH-- 653
Query: 271 KEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDI 330
SSL +F C + + ++ LK + CQ++DI
Sbjct: 654 ---------SSL----------RFQCDADACSATVNGLQIV--SLKTSASLWTDCQIADI 692
Query: 331 LITTIRDINTKLCN------VSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIEN 384
L+ R + CN L+ L+ GS+ I + D ++ A+
Sbjct: 693 LVAPFRLPDA--CNHVPVAERPLVFDETSLRSGGSVAIHL---GADGSLSDATVERAVIG 747
Query: 385 LHFPWTKHR 393
PW +HR
Sbjct: 748 SPRPWNRHR 756
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
P + +EG+ARLS PSGPA+PG +DF FS+++ G+S G+F P E+ ++
Sbjct: 211 PVGSRLEGLARLSAPSGPAYPGGYDFAFSAWFDGLSGSGFFLGAPTATRPVEAVSS---- 266
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLI 101
I +++ + IR ++ G A+ ++
Sbjct: 267 -IQAVRDGLASLIRQSVPGEGGGIAAALIV 295
>gi|153009374|ref|YP_001370589.1| ComEC/Rec2-like protein [Ochrobactrum anthropi ATCC 49188]
gi|151561262|gb|ABS14760.1| ComEC/Rec2-related protein [Ochrobactrum anthropi ATCC 49188]
Length = 858
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 133/326 (40%), Gaps = 43/326 (13%)
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
++ IF HF+ +GL+ N+LA P+++ +V+P + ++LM L LD +P +M WG+
Sbjct: 512 ASGIFAAYHFNNTAPFGLVGNVLAEPVIALLVMPFAVFGLVLMPLQLDWVPLQIMGWGIF 571
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
+ HIA ++ + G +P + V + +L++ T ++ + I + +
Sbjct: 572 AVRHIAAFVAKWSPDGNPGAMPALTIVLWAIALVLVIVLSTRLKALALPFIVLGFAVFVR 631
Query: 215 FPYSFSPDLLISEKGNLVAL-VDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKED 273
P+ PD++ISE LV + + N S F WK+A + AP K
Sbjct: 632 EPF---PDIVISEDAKLVGVRLADGKFAVNRSRQSQFTIDNWKTAYLVEEFIAPPSGKNK 688
Query: 274 LQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILIT 333
+ F C + C R + M+ ++C + D++I
Sbjct: 689 KRTDGDG-------------FEC-EDGLCTISLRDGRTLAYTADVAMLEIACNIGDVVIL 734
Query: 334 TIRDINTKLCNVSLL-ITPEILQKQGSLEITIIPPSNDNDKVKFI--------------- 377
+ + ++L I+ + L +G++EI + + N +K I
Sbjct: 735 AVSGKDPACGRSTILSISKQELALKGAVEIRLGERPDKNRSLKAISGDTYDVAKPEMSQQ 794
Query: 378 ---------IKSAIENLHFPWTKHRI 394
I AI+ PW HRI
Sbjct: 795 TSELQPEDRITYAIDAPSRPWHLHRI 820
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 12 PAETTI----EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
PA T+I G RL PSGP PG +DF+F +Y+ GI A G+F PK+ S+
Sbjct: 230 PASTSIGGGLAGFVRLRIPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKVATVSQ 285
>gi|49475428|ref|YP_033469.1| DNA uptake protein [Bartonella henselae str. Houston-1]
gi|49238234|emb|CAF27444.1| DNA uptake protein [Bartonella henselae str. Houston-1]
Length = 772
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 147/310 (47%), Gaps = 54/310 (17%)
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
++ I+ + HF I + +I+N LA+PI+S ++IP GLIA M L+ P +M +G+
Sbjct: 485 ASGIYAVYHFSNIAFFSIISNALALPIVSILIIPFGLIAAFAMCWGLEWFPLQIMGFGVG 544
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS--IMIGITIIIL 212
+I IAH ++ + G +P ++ V + + ++FCKT++R S I++GI + ++
Sbjct: 545 FVIKIAHAVTSISPDLNPGFMPLSALVLFSIGLVGLIFCKTSLRFFFSFFILVGIYVCLV 604
Query: 213 FTFPYSFSP-DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSA-----LITPFHEA 266
+SP L+I+E +V ++ + L ++ F S WK + +I P
Sbjct: 605 ------YSPVQLIIAENMRVVGVISERKLYIDHYRISKFTTSIWKKSFRVNEIIKPTKYG 658
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRK-DMIRLSC 325
P ++ F+C + CV + + V VL+ + D C
Sbjct: 659 PSFNEQ---------------------FVCDNHA-CVSLLANGLKVIVLRGEID----QC 692
Query: 326 QLSDILITTIRDINTKLCN--VSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIE 383
+DI+I T ++ CN + ++ TP+ L +GS+ +T K II S++
Sbjct: 693 VEADIIIKTF-SMSDPTCNKKMKIIFTPQQLLSRGSVMMT---------KSGEIIWSSV- 741
Query: 384 NLHFPWTKHR 393
+ PW HR
Sbjct: 742 GFYRPWNNHR 751
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT--WKKISSI 76
G ++ SGP PG +DF+F +Y+KGI A G + P I S+ + +KI ++
Sbjct: 215 GKVKIRALSGPVHPGGYDFSFHNYFKGIGAQGIYLGKPIKISVSQPDSILAIVLQKIENL 274
Query: 77 KQSFLNEIRANI-GTYGSASASI 98
+ + IR I G GS +A++
Sbjct: 275 RTNMTQRIRMTIDGEKGSVAAAL 297
>gi|239832033|ref|ZP_04680362.1| ComEC/Rec2-related protein [Ochrobactrum intermedium LMG 3301]
gi|239824300|gb|EEQ95868.1| ComEC/Rec2-related protein [Ochrobactrum intermedium LMG 3301]
Length = 817
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 123/274 (44%), Gaps = 23/274 (8%)
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
++ IF HF+ GL+ N+LA P ++ +V+P + ++LM L LD +P +M WG+
Sbjct: 471 ASGIFAAYHFNNTAPLGLVGNVLAEPAIALLVMPFAVFGLVLMPLQLDWVPLQIMGWGIF 530
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
+ HIA ++ + G +P + V + +L V T ++ + + + +++
Sbjct: 531 AVRHIAAFVATWSPDGNPGTMPALTLVFWTIALVLAVVLSTRLKVLALPFVVLGLMVFLR 590
Query: 215 FPYSFSPDLLISEKGNLVAL-VDKNTLISNYSNPPSFIFSQWKSALITPFHEAP-HVQKE 272
P+ PD+++SE LV + ++ L N + P F WK+A + P V+KE
Sbjct: 591 EPF---PDIVVSEDAKLVGVRLEDGRLAVNRNRPSQFTIDNWKTAYLVKEMIPPLSVKKE 647
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
L + F C+ + C R + M ++C + D++I
Sbjct: 648 KLAASD--------------GFECV-EGVCTITLRDGRTLAYTGEPAMREIACNIGDVVI 692
Query: 333 TTIRDINTKLCNVSLL--ITPEILQKQGSLEITI 364
+ + C S + I+ L +G++EI +
Sbjct: 693 LAVPGKDAT-CGRSTITSISKRDLALKGAVEIRL 725
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 12 PAETTI----EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM 58
PA T I G ARL PSGP PG +DF+F +Y+ GI A G+F PK+
Sbjct: 189 PATTVIGSGLSGFARLRIPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKV 239
>gi|240850323|ref|YP_002971716.1| ComEC/Rec2-related protein [Bartonella grahamii as4aup]
gi|240267446|gb|ACS51034.1| ComEC/Rec2-related protein [Bartonella grahamii as4aup]
Length = 754
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 141/312 (45%), Gaps = 53/312 (16%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
GSAS I+ HF +I+N A+P++S VIP GLIA+L M+ + +P +M +
Sbjct: 483 GSASG-IYAAYHFSNTASLSIISNAFALPVISIFVIPFGLIAVLAMLGGFEWLPLQIMGF 541
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI--GITI 209
G+D++I IAH I + G +P ++ V + + + + FCKT IR ++ I GI+I
Sbjct: 542 GVDLVIKIAHAIKAISPDLNPGFMPLSALVLLSIGLVGLTFCKTPIRLFFNLFILAGISI 601
Query: 210 IILFTFPYSFSP-DLLISEKGNLVALV-DKNTLISNYSNPPSFIFSQWKSAL-----ITP 262
++ SP L+I++ LV ++ DK I Y + F S WK + I P
Sbjct: 602 CVM------HSPVQLIIADNMRLVGVIYDKKLYIDRY-HISKFTTSIWKKSFRVNETIKP 654
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
P + + F+C C + + V VL+R+
Sbjct: 655 TKYGPSLHGQ---------------------FIC-DYHVCTSLLENGLKVVVLQRETD-- 690
Query: 323 LSCQLSDILITTIRDIN-TKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSA 381
C +DILI T N T ++ TP+ L +GS+ +T D II S+
Sbjct: 691 -QCVEADILIQTFVMRNPTCYKKAKIIFTPQQLLSRGSVMMT-----KGGD----IIWSS 740
Query: 382 IENLHFPWTKHR 393
+ H PW HR
Sbjct: 741 L-GFHRPWNMHR 751
Score = 43.1 bits (100), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 2 LSITKKYDPFPAE--TTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
+ ++ +Y P E + G ++ SGP PG +DF+F +Y+K I A G + P+ I
Sbjct: 196 IRLSARYLPSGLEIGDGLYGKVKIRAFSGPVRPGGYDFSFHNYFKRIGAQGVYLGKPRKI 255
Query: 60 YSSESHNTWT--WKKISSIKQSFLNEIRANI-GTYGSASASI 98
S+ + +KI +++ IR + G GS +A++
Sbjct: 256 SVSQPDGIFAIILQKIENLRTKMTQRIRIALEGEKGSVAAAL 297
>gi|306841870|ref|ZP_07474550.1| ComEC/Rec2-related protein [Brucella sp. BO2]
gi|306288000|gb|EFM59402.1| ComEC/Rec2-related protein [Brucella sp. BO2]
Length = 825
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 133/303 (43%), Gaps = 26/303 (8%)
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P VM GL
Sbjct: 470 ASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLW 529
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
+ HIA ++ + G +P + V + L+ V T ++ + ++ + +
Sbjct: 530 AVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALPLLAAGLAVFLK 589
Query: 215 FPYSFSPDLLISEKGNLVALVDKN-TLISNYSNPPSFIFSQWKSA-LITPFHEAPHVQKE 272
P+ PD+++SE LV + ++ + +N P F WKSA LI E K+
Sbjct: 590 VPF---PDIVVSEDAKLVVVRQQDGSFAANRDRPSKFTIDNWKSAYLIKKIIEPQKGTKK 646
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
+ N F+C ++ C R + + M ++C + DI+I
Sbjct: 647 NNAGNNGG-------------FIC-EEGVCFVTLRDGRTLSYTADETMRDVACNIGDIVI 692
Query: 333 TTIRDINTKL-CNVSLLITPEILQKQGSLEITI-----IPPSNDNDKVKFI-IKSAIENL 385
I + +L+I+ L +G+LEI + I N K + KS +E
Sbjct: 693 LAIPGKGAECESEQTLVISKRDLALKGTLEIRLGGQLSIASDEANSKPALVPPKSGLEAE 752
Query: 386 HFP 388
P
Sbjct: 753 QLP 755
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 12 PAETTI----EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
PA T I G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 189 PASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTI 240
>gi|254719208|ref|ZP_05181019.1| ComEC/Rec2-related protein [Brucella sp. 83/13]
gi|265984204|ref|ZP_06096939.1| DNA uptake protein [Brucella sp. 83/13]
gi|306837956|ref|ZP_07470814.1| ComEC/Rec2-related protein [Brucella sp. NF 2653]
gi|264662796|gb|EEZ33057.1| DNA uptake protein [Brucella sp. 83/13]
gi|306406880|gb|EFM63101.1| ComEC/Rec2-related protein [Brucella sp. NF 2653]
Length = 843
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 20/273 (7%)
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P VM GL
Sbjct: 488 ASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLW 547
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
+ HIA ++ + G IP + V + L+ V T ++ + ++ + +
Sbjct: 548 AVRHIAAFVASWSPDGNPGAIPGPALVLWTMALLVAVAFTTRLKLLALPLLAAGLAVFLK 607
Query: 215 FPYSFSPDLLISEKGNLVALVDKN-TLISNYSNPPSFIFSQWKSA-LITPFHEAPHVQKE 272
P+ PD+++SE LV + ++ + N P F WKSA LI E K+
Sbjct: 608 VPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIKKIIEPQKGTKK 664
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
+ N F+C ++ C R + + M ++C + DI I
Sbjct: 665 NTAGSNGG-------------FIC-EEGVCFVTLRDGRTLSYTADETMGDVACNIGDIAI 710
Query: 333 TTIRDINTKL-CNVSLLITPEILQKQGSLEITI 364
I + +L+I+ L +G+LEI +
Sbjct: 711 LAISGKGAQCESEQTLVISKRDLALKGTLEIRL 743
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 12 PAETTI----EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
PA T I G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 207 PASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTI 258
>gi|254701887|ref|ZP_05163715.1| ComEC/Rec2-related protein [Brucella suis bv. 5 str. 513]
gi|261752450|ref|ZP_05996159.1| DNA uptake protein [Brucella suis bv. 5 str. 513]
gi|261742203|gb|EEY30129.1| DNA uptake protein [Brucella suis bv. 5 str. 513]
Length = 843
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 140/313 (44%), Gaps = 24/313 (7%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRA-NIGTYGSA-----SASIFLIKHFHCIPVYGLI 113
+S + ++ + ++ FL + A + T G++ ++ IF HF+ GL+
Sbjct: 447 WSERNARKFSRAGRKAAERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLV 506
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
N+LA+P +S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G
Sbjct: 507 GNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPG 566
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+P + V + L+ V T ++ + ++ + + P+ PD+++SE LV
Sbjct: 567 AMPGPALVLWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVV 623
Query: 234 LVDKN-TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPR 292
+ ++ + N P FI WKSA + + QK + SS
Sbjct: 624 VRQQDGSFAVNRDRPSKFIIDNWKSAYL--IKQIIEPQKGTKKNNAGSS----------S 671
Query: 293 KFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL-CNVSLLITP 351
F+C ++ C R + + M ++C + DI I I + +L+I+
Sbjct: 672 GFIC-EEGVCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISK 730
Query: 352 EILQKQGSLEITI 364
L +G+LEI +
Sbjct: 731 RDLALKGTLEIRL 743
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 12 PAETTI----EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
PA T I G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 207 PASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTI 258
>gi|146341051|ref|YP_001206099.1| putative ComEC/Rec2 family protein [Bradyrhizobium sp. ORS278]
gi|146193857|emb|CAL77874.1| putative ComEC/Rec2 family protein [Bradyrhizobium sp. ORS278]
Length = 767
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 156/364 (42%), Gaps = 55/364 (15%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT-----WTWKKISSIKQSFLNEIRANIG 89
F +F++ G+ A+ F +PK+ + +S W +++S + L + A +
Sbjct: 413 FQMSFAATL-GLVALVQF-GLPKLFATPDSSTAQRVALWGGRELSML---LLASLIAGLA 467
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM 149
T + + HFH I YGL+AN+ A+P++S VV+PAGL+ +L LD + + VM
Sbjct: 468 T------TPYAAFHFHRITPYGLLANLAAMPVVSAVVMPAGLLGLLFAPFGLDGLWWTVM 521
Query: 150 AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE---FLLMVFCKTNIRHIGSIMIG 206
WG+D +I + VA +GRI ++V +L+ +T +R G+ ++
Sbjct: 522 GWGIDWMIAVTR--WVAALPGAVGRITAFGIGPLIVSSFGLVLIGLLRTPLRWSGAAVLA 579
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS-FIFSQWKSALITPFHE 265
I P PD+L+S G VA+ ++ L+ N F+ +W +A
Sbjct: 580 IAAAWAAATP---QPDILVSGDGRAVAVRGRDGLLHVMRNGKDVFVTREWLAA------- 629
Query: 266 APHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSC 325
D + SSL + S CV +V + R D + C
Sbjct: 630 -----DADARLPADSSLGH---------GVSCDDSGCVLALADGRLVALTLRADALADDC 675
Query: 326 QLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENL 385
+ +++T ++ C +++ P LQ+QG+L + DK ++ +
Sbjct: 676 ARAALVVTARAAPSS--CAAAVVDRPR-LQQQGALMLVA------RDKGFAVVPVRADGT 726
Query: 386 HFPW 389
PW
Sbjct: 727 DRPW 730
>gi|161619097|ref|YP_001592984.1| ComEC/Rec2-related protein [Brucella canis ATCC 23365]
gi|260566320|ref|ZP_05836790.1| DNA uptake protein [Brucella suis bv. 4 str. 40]
gi|161335908|gb|ABX62213.1| ComEC/Rec2-related protein [Brucella canis ATCC 23365]
gi|260155838|gb|EEW90918.1| DNA uptake protein [Brucella suis bv. 4 str. 40]
Length = 843
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 141/313 (45%), Gaps = 24/313 (7%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRAN-IGTYGSA-----SASIFLIKHFHCIPVYGLI 113
+S + ++ + ++ FL + A+ + T G++ ++ IF HF+ GL+
Sbjct: 447 WSERNARKFSRAGRKAAERGFLARMVASAVATGGTSLVAGLASGIFAAYHFNNTAPLGLV 506
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
N+LA+P +S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G
Sbjct: 507 GNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPG 566
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+P + V + L+ V T ++ + ++ + + P+ PD+++SE LV
Sbjct: 567 AMPGPALVLWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVV 623
Query: 234 LVDKN-TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPR 292
+ ++ + N P F WKSA + ++ + +KN +
Sbjct: 624 VRQQDGSFAVNRDRPSKFTIDNWKSAYLI----KQIIEPQKGTKKNNAGSSS-------- 671
Query: 293 KFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL-CNVSLLITP 351
F+C ++ C R + + M ++C + DI I I + +L+I+
Sbjct: 672 GFIC-EEGVCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISK 730
Query: 352 EILQKQGSLEITI 364
L +G+LEI +
Sbjct: 731 RDLALKGTLEIRL 743
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 12 PAETTI----EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
PA T I G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 207 PASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTI 258
>gi|306844009|ref|ZP_07476604.1| ComEC/Rec2-related protein [Brucella sp. BO1]
gi|306275764|gb|EFM57488.1| ComEC/Rec2-related protein [Brucella sp. BO1]
Length = 843
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 139/314 (44%), Gaps = 26/314 (8%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRA-NIGTYGSA-----SASIFLIKHFHCIPVYGLI 113
+S + ++ + ++ FL + A + T G++ ++ IF HF+ GL+
Sbjct: 447 WSERNARKFSRAGRKAAERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLV 506
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
N+LA+P +S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G
Sbjct: 507 GNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPG 566
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
IP + V + L+ V T ++ + ++ + + P+ PD+++SE LV
Sbjct: 567 AIPGLALVLWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVV 623
Query: 234 LVDKN-TLISNYSNPPSFIFSQWKSA-LITPFHEAPHVQKEDLQEKNQSSLKEILRSMQP 291
+ ++ + N P F WKSA LI E K++ +
Sbjct: 624 VRQQDGSFAVNRDRPSKFTIDNWKSAYLIKKIIEPQKGTKKNTAGNSGG----------- 672
Query: 292 RKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL-CNVSLLIT 350
F+C ++ C R + + M ++C + DI I I + +L+I+
Sbjct: 673 --FIC-EEGVCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAECESEQTLVIS 729
Query: 351 PEILQKQGSLEITI 364
L +G+LEI +
Sbjct: 730 KRDLALKGTLEIRL 743
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 12 PAETTI----EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
PA T I G ARL PSG PG +DF+F +Y+ GI A G+F PK I
Sbjct: 207 PASTAIGSGLTGFARLRVPSGQVRPGNYDFSFHAYFNGIGANGFFLGTPKTI 258
>gi|23502023|ref|NP_698150.1| ComEC/Rec2 family protein [Brucella suis 1330]
gi|23347976|gb|AAN30065.1| ComEC/Rec2 family protein, putative [Brucella suis 1330]
Length = 843
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 139/313 (44%), Gaps = 24/313 (7%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRA-NIGTYGSA-----SASIFLIKHFHCIPVYGLI 113
+S + ++ + ++ FL + A + T G++ ++ IF HF+ GL+
Sbjct: 447 WSERNARKFSGAGRKAAERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLV 506
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
N+LA+P +S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G
Sbjct: 507 GNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPG 566
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+P + V + L+ V T ++ + ++ + + P+ PD+++SE LV
Sbjct: 567 AMPGPALVLWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVV 623
Query: 234 LVDKN-TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPR 292
+ ++ + N P F WKSA + + QK + SS
Sbjct: 624 VRQQDGSFAVNRDRPSKFTIDNWKSAYL--IKQIIEPQKGTKKNNAGSS----------S 671
Query: 293 KFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL-CNVSLLITP 351
F+C ++ C R + + M ++C + DI I I + +L+I+
Sbjct: 672 GFIC-EEGVCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISK 730
Query: 352 EILQKQGSLEITI 364
L +G+LEI +
Sbjct: 731 RDLALKGTLEIRL 743
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 12 PAETTI----EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
PA T I G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 207 PASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTI 258
>gi|114705893|ref|ZP_01438796.1| ComEC/Rec2 family protein, putative [Fulvimarina pelagi HTCC2506]
gi|114538739|gb|EAU41860.1| ComEC/Rec2 family protein, putative [Fulvimarina pelagi HTCC2506]
Length = 801
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 123/295 (41%), Gaps = 29/295 (9%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
+ I HF +GL+AN+L +P+ S +++P L+ ++LM + LD IP + GLD +I
Sbjct: 481 YSIFHFQRFAPFGLVANLLVMPLFSLLIMPMALLGVVLMPVGLDAIPLTAVGMGLDALIA 540
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
IA ++ + G + ++ +T+ L+ +R + + +++ +
Sbjct: 541 IAFDLASQLPDQSTGLVRPSALITLSAALLIFCIPVGRLRWLAVPFLATGLVM--AIDRA 598
Query: 219 FSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKN 278
+P+ LI E G AL++ T+ + P SF+ QW A + E +
Sbjct: 599 ATPEFLIFEDGKTFALIENGTIAYSKGRPNSFVSDQWDRAY----------RAEGTERGL 648
Query: 279 QSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDI 338
LK+ C K C S + V ++ +C ++I
Sbjct: 649 IPGLKD-----------CESK-ICRFTTPSGITVAYTTDYRLLGEACDSAEIAFVARAAR 696
Query: 339 NTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
+ + + L+T L++ GSL I P S + ++ ++ W +HR
Sbjct: 697 TRRCRSGAHLVTLRTLRRSGSLAIARDPSSGE-----IVVSRSVLAAPADWNRHR 746
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPK 57
+ ++D EG+ RL PP+GPAFPG +DF F Y++G+ A G+ IPK
Sbjct: 193 VAGEHDVMRPGDRFEGLVRLRPPAGPAFPGSYDFAFVPYFEGLGAYGFSLGIPK 246
>gi|189024298|ref|YP_001935066.1| ComEC/Rec2-related protein [Brucella abortus S19]
gi|237815567|ref|ZP_04594564.1| ComEC/Rec2-related protein [Brucella abortus str. 2308 A]
gi|189019870|gb|ACD72592.1| ComEC/Rec2-related protein [Brucella abortus S19]
gi|237788865|gb|EEP63076.1| ComEC/Rec2-related protein [Brucella abortus str. 2308 A]
Length = 849
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 139/313 (44%), Gaps = 24/313 (7%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRA-NIGTYGSA-----SASIFLIKHFHCIPVYGLI 113
+S + ++ + ++ FL + A + T G++ ++ IF HF+ GL+
Sbjct: 453 WSERNARKFSRAGRKAAERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLV 512
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
N+LA+P +S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G
Sbjct: 513 GNVLALPAISILVMPFGVFGLVLMSLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPG 572
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+P + V + L+ V T ++ + ++ + + P+ PD+++SE LV
Sbjct: 573 AMPGPALVLWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVV 629
Query: 234 LVDKN-TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPR 292
+ ++ + N P F WKSA + + QK + SS
Sbjct: 630 VRQQDGSFAVNRDRPSKFTIDNWKSAYL--IKQIIEPQKGTKKNNAGSS----------S 677
Query: 293 KFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL-CNVSLLITP 351
F+C ++ C R + + M ++C + DI I I + +L+I+
Sbjct: 678 GFIC-EEGVCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISK 736
Query: 352 EILQKQGSLEITI 364
L +G+LEI +
Sbjct: 737 RDLALKGTLEIRL 749
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 12 PAETTI----EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
PA T I G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 213 PASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTI 264
>gi|62290058|ref|YP_221851.1| ComEC/Rec2 family protein [Brucella abortus bv. 1 str. 9-941]
gi|82699985|ref|YP_414559.1| ComEC/Rec2-like protein [Brucella melitensis biovar Abortus 2308]
gi|254697503|ref|ZP_05159331.1| ComEC/Rec2-related protein [Brucella abortus bv. 2 str. 86/8/59]
gi|254730400|ref|ZP_05188978.1| ComEC/Rec2-related protein [Brucella abortus bv. 4 str. 292]
gi|260546610|ref|ZP_05822349.1| DNA uptake protein [Brucella abortus NCTC 8038]
gi|260758104|ref|ZP_05870452.1| DNA uptake protein [Brucella abortus bv. 4 str. 292]
gi|260761928|ref|ZP_05874271.1| DNA uptake protein [Brucella abortus bv. 2 str. 86/8/59]
gi|62196190|gb|AAX74490.1| ComEC/Rec2 family protein, hypothetical [Brucella abortus bv. 1
str. 9-941]
gi|82616086|emb|CAJ11124.1| ComEC/Rec2-related protein [Brucella melitensis biovar Abortus
2308]
gi|260095660|gb|EEW79537.1| DNA uptake protein [Brucella abortus NCTC 8038]
gi|260668422|gb|EEX55362.1| DNA uptake protein [Brucella abortus bv. 4 str. 292]
gi|260672360|gb|EEX59181.1| DNA uptake protein [Brucella abortus bv. 2 str. 86/8/59]
Length = 843
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 140/313 (44%), Gaps = 24/313 (7%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRA-NIGTYGSA-----SASIFLIKHFHCIPVYGLI 113
+S + ++ + ++ FL + A + T G++ ++ IF HF+ GL+
Sbjct: 447 WSERNARKFSRAGRKAAERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLV 506
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
N+LA+P +S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G
Sbjct: 507 GNVLALPAISILVMPFGVFGLVLMSLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPG 566
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+P + V + L+ V T ++ + ++ + + P+ PD+++SE LV
Sbjct: 567 AMPGPALVLWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVV 623
Query: 234 LVDKN-TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPR 292
+ ++ + N P F WKSA + ++ + +KN +
Sbjct: 624 VRQQDGSFAVNRDRPSKFTIDNWKSAYLI----KQIIEPQKGTKKNNAGSSS-------- 671
Query: 293 KFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL-CNVSLLITP 351
F+C ++ C R + + M ++C + DI I I + +L+I+
Sbjct: 672 GFIC-EEGVCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISK 730
Query: 352 EILQKQGSLEITI 364
L +G+LEI +
Sbjct: 731 RDLALKGTLEIRL 743
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 12 PAETTI----EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
PA T I G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 207 PASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTI 258
>gi|256061228|ref|ZP_05451379.1| ComEC/Rec2-related protein [Brucella neotomae 5K33]
gi|261325235|ref|ZP_05964432.1| DNA uptake protein [Brucella neotomae 5K33]
gi|261301215|gb|EEY04712.1| DNA uptake protein [Brucella neotomae 5K33]
Length = 843
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 140/313 (44%), Gaps = 24/313 (7%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRA-NIGTYGSA-----SASIFLIKHFHCIPVYGLI 113
+S + ++ + ++ FL + A + T G++ ++ IF HF+ GL+
Sbjct: 447 WSERNARKFSRAGRKAAERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLV 506
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
N+LA+P +S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G
Sbjct: 507 GNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPG 566
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+P + V + L+ V T ++ + ++ + + P+ PD+++SE LV
Sbjct: 567 AMPGPALVLWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVV 623
Query: 234 LVDKN-TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPR 292
+ ++ + N P F WKSA + ++ + +KN +
Sbjct: 624 VRQQDGSFAVNRDRPSKFTIDNWKSAYLI----KQIIEPQKGTKKNNAGSSS-------- 671
Query: 293 KFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL-CNVSLLITP 351
F+C ++ C R + + M ++C + DI I I + +L+I+
Sbjct: 672 GFIC-EEGVCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISK 730
Query: 352 EILQKQGSLEITI 364
L +G+LEI +
Sbjct: 731 RDLALKGTLEIRL 743
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 12 PAETTI----EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
PA T I G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 207 PASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTI 258
>gi|254704433|ref|ZP_05166261.1| ComEC/Rec2-related protein [Brucella suis bv. 3 str. 686]
gi|261755110|ref|ZP_05998819.1| DNA uptake protein [Brucella suis bv. 3 str. 686]
gi|261744863|gb|EEY32789.1| DNA uptake protein [Brucella suis bv. 3 str. 686]
Length = 843
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 139/313 (44%), Gaps = 24/313 (7%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRA-NIGTYGSA-----SASIFLIKHFHCIPVYGLI 113
+S + ++ + ++ FL + A + T G++ ++ IF HF+ GL+
Sbjct: 447 WSERNARKFSRAGRKAAERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLV 506
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
N+LA+P +S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G
Sbjct: 507 GNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPG 566
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+P + V + L+ V T ++ + ++ + + P+ PD+++SE LV
Sbjct: 567 AMPGPALVLWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVV 623
Query: 234 LVDKN-TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPR 292
+ ++ + N P F WKSA + + QK + SS
Sbjct: 624 VRQQDGSFAVNRDRPSKFTIDNWKSAYL--IKQIIEPQKGTKKNNAGSS----------S 671
Query: 293 KFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL-CNVSLLITP 351
F+C ++ C R + + M ++C + DI I I + +L+I+
Sbjct: 672 GFIC-EEGVCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISK 730
Query: 352 EILQKQGSLEITI 364
L +G+LEI +
Sbjct: 731 RDLALKGTLEIRL 743
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 12 PAETTI----EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
PA T I G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 207 PASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTI 258
>gi|254689370|ref|ZP_05152624.1| ComEC/Rec2-related protein [Brucella abortus bv. 6 str. 870]
Length = 849
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 140/313 (44%), Gaps = 24/313 (7%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRA-NIGTYGSA-----SASIFLIKHFHCIPVYGLI 113
+S + ++ + ++ FL + A + T G++ ++ IF HF+ GL+
Sbjct: 453 WSERNARKFSRAGRKAAERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLV 512
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
N+LA+P +S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G
Sbjct: 513 GNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPG 572
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+P + V + L+ V T ++ + ++ + + P+ PD+++SE LV
Sbjct: 573 AMPGPALVLWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVV 629
Query: 234 LVDKN-TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPR 292
+ ++ + N P F WKSA + ++ + +KN +
Sbjct: 630 VRQQDGSFAVNRDRPSKFTIDNWKSAYLI----KQIIEPQKGTKKNNAGSSS-------- 677
Query: 293 KFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL-CNVSLLITP 351
F+C ++ C R + + M ++C + DI I I + +L+I+
Sbjct: 678 GFIC-EEGVCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISK 736
Query: 352 EILQKQGSLEITI 364
L +G+LEI +
Sbjct: 737 RDLALKGTLEIRL 749
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 12 PAETTI----EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
PA T I G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 213 PASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTI 264
>gi|254706671|ref|ZP_05168499.1| ComEC/Rec2-related protein [Brucella pinnipedialis M163/99/10]
gi|254710221|ref|ZP_05172032.1| ComEC/Rec2-related protein [Brucella pinnipedialis B2/94]
gi|256031715|ref|ZP_05445329.1| ComEC/Rec2-related protein [Brucella pinnipedialis M292/94/1]
gi|256369571|ref|YP_003107081.1| ComEC/Rec2 family protein, putative [Brucella microti CCM 4915]
gi|261314132|ref|ZP_05953329.1| DNA uptake protein [Brucella pinnipedialis M163/99/10]
gi|261317779|ref|ZP_05956976.1| DNA uptake protein [Brucella pinnipedialis B2/94]
gi|265988810|ref|ZP_06101367.1| DNA uptake protein [Brucella pinnipedialis M292/94/1]
gi|255999733|gb|ACU48132.1| ComEC/Rec2 family protein, putative [Brucella microti CCM 4915]
gi|261297002|gb|EEY00499.1| DNA uptake protein [Brucella pinnipedialis B2/94]
gi|261303158|gb|EEY06655.1| DNA uptake protein [Brucella pinnipedialis M163/99/10]
gi|264661007|gb|EEZ31268.1| DNA uptake protein [Brucella pinnipedialis M292/94/1]
Length = 843
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 139/313 (44%), Gaps = 24/313 (7%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRA-NIGTYGSA-----SASIFLIKHFHCIPVYGLI 113
+S + ++ + ++ FL + A + T G++ ++ IF HF+ GL+
Sbjct: 447 WSERNARKFSRAGRKAAERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLV 506
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
N+LA+P +S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G
Sbjct: 507 GNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPG 566
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+P + V + L+ V T ++ + ++ + + P+ PD+++SE LV
Sbjct: 567 AMPGPALVLWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVV 623
Query: 234 LVDKN-TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPR 292
+ ++ + N P F WKSA + + QK + SS
Sbjct: 624 VRQQDGSFAVNRDRPSKFTIDNWKSAYL--IKQIIEPQKGTKKNNAGSS----------S 671
Query: 293 KFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL-CNVSLLITP 351
F+C ++ C R + + M ++C + DI I I + +L+I+
Sbjct: 672 GFIC-EEGVCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISK 730
Query: 352 EILQKQGSLEITI 364
L +G+LEI +
Sbjct: 731 RDLALKGTLEIRL 743
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 12 PAETTI----EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
PA T I G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 207 PASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTI 258
>gi|254693854|ref|ZP_05155682.1| ComEC/Rec2-related protein [Brucella abortus bv. 3 str. Tulya]
gi|261214139|ref|ZP_05928420.1| DNA uptake protein [Brucella abortus bv. 3 str. Tulya]
gi|260915746|gb|EEX82607.1| DNA uptake protein [Brucella abortus bv. 3 str. Tulya]
Length = 840
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 139/313 (44%), Gaps = 24/313 (7%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRA-NIGTYGSA-----SASIFLIKHFHCIPVYGLI 113
+S + ++ + ++ FL + A + T G++ ++ IF HF+ GL+
Sbjct: 444 WSERNARKFSRAGRKAAERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLV 503
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
N+LA+P +S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G
Sbjct: 504 GNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPG 563
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+P + V + L+ V T ++ + ++ + + P+ PD+++SE LV
Sbjct: 564 AMPGPALVLWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVV 620
Query: 234 LVDKN-TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPR 292
+ ++ + N P F WKSA + + QK + SS
Sbjct: 621 VRQQDGSFAVNRDRPSKFTIDNWKSAYL--IKQIIEPQKGTKKNNAGSS----------S 668
Query: 293 KFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL-CNVSLLITP 351
F+C ++ C R + + M ++C + DI I I + +L+I+
Sbjct: 669 GFIC-EEGVCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISK 727
Query: 352 EILQKQGSLEITI 364
L +G+LEI +
Sbjct: 728 RDLALKGTLEIRL 740
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 12 PAETTI----EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
PA T I G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 207 PASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTI 258
>gi|256257616|ref|ZP_05463152.1| ComEC/Rec2-related protein [Brucella abortus bv. 9 str. C68]
gi|260754887|ref|ZP_05867235.1| DNA uptake protein [Brucella abortus bv. 6 str. 870]
gi|260883899|ref|ZP_05895513.1| DNA uptake protein [Brucella abortus bv. 9 str. C68]
gi|297248458|ref|ZP_06932176.1| competence protein ComEC [Brucella abortus bv. 5 str. B3196]
gi|260674995|gb|EEX61816.1| DNA uptake protein [Brucella abortus bv. 6 str. 870]
gi|260873427|gb|EEX80496.1| DNA uptake protein [Brucella abortus bv. 9 str. C68]
gi|297175627|gb|EFH34974.1| competence protein ComEC [Brucella abortus bv. 5 str. B3196]
Length = 843
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 140/313 (44%), Gaps = 24/313 (7%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRA-NIGTYGSA-----SASIFLIKHFHCIPVYGLI 113
+S + ++ + ++ FL + A + T G++ ++ IF HF+ GL+
Sbjct: 447 WSERNARKFSRAGRKAAERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLV 506
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
N+LA+P +S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G
Sbjct: 507 GNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPG 566
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+P + V + L+ V T ++ + ++ + + P+ PD+++SE LV
Sbjct: 567 AMPGPALVLWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVV 623
Query: 234 LVDKN-TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPR 292
+ ++ + N P F WKSA + ++ + +KN +
Sbjct: 624 VRQQDGSFAVNRDRPSKFTIDNWKSAYLI----KQIIEPQKGTKKNNAGSSS-------- 671
Query: 293 KFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL-CNVSLLITP 351
F+C ++ C R + + M ++C + DI I I + +L+I+
Sbjct: 672 GFIC-EEGVCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISK 730
Query: 352 EILQKQGSLEITI 364
L +G+LEI +
Sbjct: 731 RDLALKGTLEIRL 743
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 12 PAETTI----EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
PA T I G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 207 PASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTI 258
>gi|163868120|ref|YP_001609324.1| putative DNA uptake protein [Bartonella tribocorum CIP 105476]
gi|161017771|emb|CAK01329.1| putative DNA uptake protein [Bartonella tribocorum CIP 105476]
Length = 769
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 143/314 (45%), Gaps = 57/314 (18%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
GSAS I+ HF +I+N A+PI+S +VIP GLIA+L M+ + +P +M +
Sbjct: 483 GSASG-IYAAYHFSNTASLSIISNAFALPIISILVIPFGLIAVLAMLGGFEWLPLQIMGF 541
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI--GITI 209
G+D++I IAH I + G +P ++ V + + + + FCKT IR S+ I G +I
Sbjct: 542 GVDLVIKIAHAIKAISPDLNPGFMPLSALVLLSIGLVGLTFCKTPIRLFFSLFILAGFSI 601
Query: 210 IILFTFPYSFSP-DLLISEKGNLVALV-DKNTLISNYSNPPSFIFSQWKSAL-----ITP 262
I+ SP L+I++ LV ++ DK I Y + F S W+ + I P
Sbjct: 602 CIM------HSPVQLIIADNMRLVGVIHDKKLYIDRYHH-SKFTTSIWEKSFRLNETIKP 654
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRK-DMI 321
P + F+C C + + V VL+ + D
Sbjct: 655 TRYGPSFHGQ---------------------FIC-DHDVCTSLLENGLKVIVLRGEVD-- 690
Query: 322 RLSCQLSDILITTIRDINTKLCN--VSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIK 379
C +DILI T ++ + C+ ++ TP+ L +GS+ +T K + I
Sbjct: 691 --HCIEADILIQTFL-VHNQTCHKKAKIIFTPQQLLSRGSVMMT---------KSRDITW 738
Query: 380 SAIENLHFPWTKHR 393
S++ H PW HR
Sbjct: 739 SSL-GFHRPWNMHR 751
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT--WKKISSI 76
G +L SG PG +DF+F +Y+KGI A G + PK I S+ +K ++
Sbjct: 215 GKVKLRAFSGSVRPGGYDFSFHNYFKGIGAQGVYLGKPKKISVSQPDGILAIILQKTENL 274
Query: 77 KQSFLNEIRANI-GTYGSASASI 98
+ IR + G GS +A++
Sbjct: 275 RMKMTQRIRFALEGEKGSVAAAL 297
>gi|261758335|ref|ZP_06002044.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp.
F5/99]
gi|261738319|gb|EEY26315.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp.
F5/99]
Length = 679
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 140/313 (44%), Gaps = 24/313 (7%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRA-NIGTYGSA-----SASIFLIKHFHCIPVYGLI 113
+S + ++ + ++ FL + A + T G++ ++ IF HF+ GL+
Sbjct: 283 WSERNARKFSRAGRKAAERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLV 342
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
N+LA+P +S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G
Sbjct: 343 GNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPG 402
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+P + V + L+ V T ++ + ++ + + P+ PD+++SE LV
Sbjct: 403 AMPGPALVLWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVV 459
Query: 234 LVDKN-TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPR 292
+ ++ + N P F WKSA + ++ + +KN +
Sbjct: 460 VRQQDGSFAVNRDRPSKFTIDNWKSAYLI----KQIIEPQKGTKKNNAGSSS-------- 507
Query: 293 KFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL-CNVSLLITP 351
F+C ++ C R + + M ++C + DI I I + +L+I+
Sbjct: 508 GFIC-EEGVCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISK 566
Query: 352 EILQKQGSLEITI 364
L +G+LEI +
Sbjct: 567 RDLALKGTLEIRL 579
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 7 KYDPFPAETT-IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
+Y F + +G L PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 41 RYSCFDGDRQRADGFCTLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTI 94
>gi|294852485|ref|ZP_06793158.1| competence protein ComEC [Brucella sp. NVSL 07-0026]
gi|294821074|gb|EFG38073.1| competence protein ComEC [Brucella sp. NVSL 07-0026]
Length = 843
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 122/272 (44%), Gaps = 18/272 (6%)
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P VM GL
Sbjct: 488 ASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLW 547
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
+ HIA ++ + G +P + V + L+ V T ++ + ++ + +
Sbjct: 548 AVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALPLLAAGLAVFLK 607
Query: 215 FPYSFSPDLLISEKGNLVALVDKN-TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKED 273
P+ PD+++SE LV + ++ + N P F WKSA + + QK
Sbjct: 608 VPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYL--IKQIIEPQKGT 662
Query: 274 LQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILIT 333
+ SS F+C ++ C R + + M ++C + DI I
Sbjct: 663 KKNNAGSS----------SGFIC-EEGVCFVTLRDGRTLSYTADETMRDVACNIGDIAIL 711
Query: 334 TIRDINTKL-CNVSLLITPEILQKQGSLEITI 364
I + +L+I+ L +G+LEI +
Sbjct: 712 AISGKGAQCESEQTLVISKRDLALKGTLEIRL 743
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 12 PAETTI----EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
PA T I G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 207 PASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTI 258
>gi|260565598|ref|ZP_05836082.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
melitensis bv. 1 str. 16M]
gi|265991225|ref|ZP_06103782.1| LOW QUALITY PROTEIN: DNA uptake protein [Brucella melitensis bv. 1
str. Rev.1]
gi|260151666|gb|EEW86760.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
melitensis bv. 1 str. 16M]
gi|263002009|gb|EEZ14584.1| LOW QUALITY PROTEIN: DNA uptake protein [Brucella melitensis bv. 1
str. Rev.1]
Length = 679
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 140/313 (44%), Gaps = 24/313 (7%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRA-NIGTYGSA-----SASIFLIKHFHCIPVYGLI 113
+S + ++ + ++ FL + A + T G++ ++ IF HF+ GL+
Sbjct: 283 WSERNARKFSRAGRKAAERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLV 342
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
N+LA+P +S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G
Sbjct: 343 GNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPG 402
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+P + V + L+ V T ++ + ++ + + P+ PD+++SE LV
Sbjct: 403 AMPGPALVLWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVV 459
Query: 234 LVDKN-TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPR 292
+ ++ + N P F WKSA + ++ + +KN +
Sbjct: 460 VRQQDGSFAVNRDRPSKFTIDNWKSAYLI----KQIIEPQKGTKKNNAGSSS-------- 507
Query: 293 KFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL-CNVSLLITP 351
F+C ++ C R + + M ++C + DI I I + +L+I+
Sbjct: 508 GFIC-EEGVCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISK 566
Query: 352 EILQKQGSLEITI 364
L +G+LEI +
Sbjct: 567 RDLALKGTLEIRL 579
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 29 PAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
P PG +DF+F +Y+ GI A G+F PK I
Sbjct: 64 PVRPGNYDFSFHAYFNGIGANGFFLGTPKTI 94
>gi|265995061|ref|ZP_06107618.1| DNA uptake protein [Brucella melitensis bv. 3 str. Ether]
gi|262766174|gb|EEZ11963.1| DNA uptake protein [Brucella melitensis bv. 3 str. Ether]
Length = 426
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 142/320 (44%), Gaps = 25/320 (7%)
Query: 54 SIPKMIYSSESH-NTWTWKKISSIKQSFLNEIRA-NIGTYGSA-----SASIFLIKHFHC 106
S P M SE + ++ + ++ FL + A + T G++ ++ IF HF+
Sbjct: 23 SSPPMPGGSERNARKFSRAGRKAAERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNN 82
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVA 166
GL+ N+LA+P +S +V+P G+ ++LM L LD +P VM GL + HIA ++
Sbjct: 83 TAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASW 142
Query: 167 HNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
+ G +P + V + L+ V T ++ + ++ + + P+ PD+++S
Sbjct: 143 SPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVS 199
Query: 227 EKGNLVALVDKN-TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEI 285
E LV + ++ + N P F WKSA + + QK + SS
Sbjct: 200 EDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYL--IKQIIEPQKGTKKNNAGSS---- 253
Query: 286 LRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL-CN 344
F+C ++ C R + + M ++C + DI I I +
Sbjct: 254 ------SGFIC-EEGVCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESE 306
Query: 345 VSLLITPEILQKQGSLEITI 364
+L+I+ L +G+LEI +
Sbjct: 307 QTLVISKRDLALKGTLEIRL 326
>gi|163843410|ref|YP_001627814.1| ComEC/Rec2-related protein [Brucella suis ATCC 23445]
gi|163674133|gb|ABY38244.1| ComEC/Rec2-related protein [Brucella suis ATCC 23445]
Length = 843
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 139/313 (44%), Gaps = 24/313 (7%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRA-NIGTYGSA-----SASIFLIKHFHCIPVYGLI 113
+S + ++ + ++ FL + A + T G++ ++ IF HF+ GL+
Sbjct: 447 WSERNARKFSRAGRKAAERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLV 506
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
N+LA+P +S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G
Sbjct: 507 GNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPG 566
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+P + V + L+ V T ++ + ++ + + P+ PD+++SE LV
Sbjct: 567 AMPGPALVLWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVV 623
Query: 234 LVDKN-TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPR 292
+ ++ + N P F WKSA + + QK + SS
Sbjct: 624 VRQQDGSFPVNRDRPSKFTIDNWKSAYL--IKQIIEPQKGTKKNNAGSS----------S 671
Query: 293 KFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL-CNVSLLITP 351
F+C ++ C R + + M ++C + DI I I + +L+I+
Sbjct: 672 GFIC-EEGVCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISK 730
Query: 352 EILQKQGSLEITI 364
L +G+LEI +
Sbjct: 731 RDLALKGTLEIRL 743
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 12 PAETTI----EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
PA T I G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 207 PASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTI 258
>gi|260168847|ref|ZP_05755658.1| ComEC/Rec2 family protein, putative [Brucella sp. F5/99]
Length = 584
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 139/313 (44%), Gaps = 24/313 (7%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRA-NIGTYGSA-----SASIFLIKHFHCIPVYGLI 113
+S + ++ + ++ FL + A + T G++ ++ IF HF+ GL+
Sbjct: 188 WSERNARKFSRAGRKAAERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLV 247
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
N+LA+P +S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G
Sbjct: 248 GNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPG 307
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+P + V + L+ V T ++ + ++ + + P+ PD+++SE LV
Sbjct: 308 AMPGPALVLWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVV 364
Query: 234 LVDKN-TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPR 292
+ ++ + N P F WKSA + + QK + SS
Sbjct: 365 VRQQDGSFAVNRDRPSKFTIDNWKSAYL--IKQIIEPQKGTKKNNAGSS----------S 412
Query: 293 KFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL-CNVSLLITP 351
F+C ++ C R + + M ++C + DI I I + +L+I+
Sbjct: 413 GFIC-EEGVCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISK 471
Query: 352 EILQKQGSLEITI 364
L +G+LEI +
Sbjct: 472 RDLALKGTLEIRL 484
>gi|17987122|ref|NP_539756.1| COME operon protein 3 [Brucella melitensis bv. 1 str. 16M]
gi|256044801|ref|ZP_05447705.1| COME operon protein 3 [Brucella melitensis bv. 1 str. Rev.1]
gi|17982785|gb|AAL52020.1| come operon protein 3 [Brucella melitensis bv. 1 str. 16M]
gi|326409163|gb|ADZ66228.1| ComEC/Rec2-related protein [Brucella melitensis M28]
gi|326538873|gb|ADZ87088.1| come operon protein 3 [Brucella melitensis M5-90]
Length = 565
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 139/313 (44%), Gaps = 24/313 (7%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRA-NIGTYGSA-----SASIFLIKHFHCIPVYGLI 113
+S + ++ + ++ FL + A + T G++ ++ IF HF+ GL+
Sbjct: 169 WSERNARKFSRAGRKAAERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLV 228
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
N+LA+P +S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G
Sbjct: 229 GNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPG 288
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+P + V + L+ V T ++ + ++ + + P+ PD+++SE LV
Sbjct: 289 AMPGPALVLWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVV 345
Query: 234 LVDKN-TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPR 292
+ ++ + N P F WKSA + + QK + SS
Sbjct: 346 VRQQDGSFAVNRDRPSKFTIDNWKSAYL--IKQIIEPQKGTKKNNAGSS----------S 393
Query: 293 KFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL-CNVSLLITP 351
F+C ++ C R + + M ++C + DI I I + +L+I+
Sbjct: 394 GFIC-EEGVCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISK 452
Query: 352 EILQKQGSLEITI 364
L +G+LEI +
Sbjct: 453 RDLALKGTLEIRL 465
>gi|265999445|ref|ZP_06111693.1| ComEC/Rec2 family protein [Brucella melitensis bv. 2 str. 63/9]
gi|263093994|gb|EEZ17928.1| ComEC/Rec2 family protein [Brucella melitensis bv. 2 str. 63/9]
Length = 584
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 139/313 (44%), Gaps = 24/313 (7%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRA-NIGTYGSA-----SASIFLIKHFHCIPVYGLI 113
+S + ++ + ++ FL + A + T G++ ++ IF HF+ GL+
Sbjct: 188 WSERNARKFSRAGRKAAERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLV 247
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
N+LA+P +S +V+P G+ ++LM L LD +P VM GL + HIA ++ + G
Sbjct: 248 GNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASWSPDGNPG 307
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+P + V + L+ V T ++ + ++ + + P+ PD+++SE LV
Sbjct: 308 AMPGPALVLWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVV 364
Query: 234 LVDKN-TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPR 292
+ ++ + N P F WKSA + + QK + SS
Sbjct: 365 VRQQDGSFAVNRDRPSKFTIDNWKSAYL--IKQIIEPQKGTKKNNAGSS----------S 412
Query: 293 KFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL-CNVSLLITP 351
F+C ++ C R + + M ++C + DI I I + +L+I+
Sbjct: 413 GFIC-EEGVCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISK 471
Query: 352 EILQKQGSLEITI 364
L +G+LEI +
Sbjct: 472 RDLALKGTLEIRL 484
>gi|75676033|ref|YP_318454.1| ComEC/Rec2-related protein [Nitrobacter winogradskyi Nb-255]
gi|74420903|gb|ABA05102.1| ComEC/Rec2-related protein [Nitrobacter winogradskyi Nb-255]
Length = 778
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 130/285 (45%), Gaps = 43/285 (15%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HFH + YG+ AN+LA+P++S +V+PAGL+ + M D + + +M +G++ ++ +A
Sbjct: 466 HFHRVTPYGMAANLLAMPVISALVMPAGLLGLAAMPFGFDGVFWRLMDFGIEWMVAVAQ- 524
Query: 163 ISVAHNEFCIGRIPE---TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
V IGRI + +L+ +T +R G+I++G+ I+ +S
Sbjct: 525 -GVVELPGSIGRIAAFGTGPLLAATAGIVLLGLLRTPLRWGGAIVVGLAIV------WSL 577
Query: 220 S---PDLLISEKGNLVALVDKN---TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKED 273
+ PD+LIS +G VA+ + LIS + SF +W +A D
Sbjct: 578 AVKPPDILISAEGRNVAVRGGDGRLRLISTGKD--SFTVREWLAA------------DGD 623
Query: 274 LQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILIT 333
++ +L E + + CV IV + + + ++ C +++++T
Sbjct: 624 VRGPTDPTLAE---------GVSCDDAGCVVKASGGGIVALTRHPEALQDDCARAELIVT 674
Query: 334 TIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFII 378
+ L +V I L+++G+L + P S+ D + +
Sbjct: 675 RWQAPEGCLAHV---IDQNRLRREGALALWRTPNSSRQDASRLDV 716
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ K P + +E ARL PP P PG +DF Y++GI A G+ K + S
Sbjct: 176 LSVRKGAAPA-VGSFVELKARLQPPLTPVRPGSYDFARDMYFQGIGASGFVMGAIKTVAS 234
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANI 88
+ + +++ Q + I A I
Sbjct: 235 PPAGGIAL--RYAALMQELRDAIDARI 259
>gi|300023413|ref|YP_003756024.1| ComEC/Rec2-related protein [Hyphomicrobium denitrificans ATCC
51888]
gi|299525234|gb|ADJ23703.1| ComEC/Rec2-related protein [Hyphomicrobium denitrificans ATCC
51888]
Length = 779
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 118/260 (45%), Gaps = 38/260 (14%)
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
F EI A+ S + + F +FH Y ++AN++AIPI + +V+PA L A++LM
Sbjct: 422 FFGEIIAST-LIASVAVAPFAAYNFHQSQQYAVLANMIAIPICNIIVMPAALGAMILMPF 480
Query: 140 SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE---TSFVTIVVEFLLMVFCKTN 196
L+ I MAWG++ + A+ + +G +PE +F +++ L + +T
Sbjct: 481 GLEWIALKPMAWGIEGMAWCANMVGALPG--AVGHLPEIPTIAFALMLIGGLWLTLWRTR 538
Query: 197 IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWK 256
IR +G+ G+ ++ L P+ PD+L+++KG LVA+ D + +S+
Sbjct: 539 IRLVGA---GLALLGLVATPWMPRPDVLVAQKGMLVAVRDASGKLSSL------------ 583
Query: 257 SALITPFHEAPHVQKEDLQE--KNQSSLKEILRSMQPRKFLCIKKSFCVGC--HRSDVIV 312
P H A K DL+ + + + F C VGC H V
Sbjct: 584 -----PAHGA----KYDLERWLEYDGDGRSARDAQAGGAFSC----DAVGCIAHVKGATV 630
Query: 313 GVLKRKDMIRLSCQLSDILI 332
V + + C +DILI
Sbjct: 631 AVARHPAAVADDCLNADILI 650
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW---KKISSIK 77
A LSPP+ PA PG FD+ ++++ + A+GY ++ P I + T T + I +++
Sbjct: 176 ANLSPPAKPALPGGFDYARTAWFDQVGAVGYAFA-PPAIEAHADGGTLTAQYRRGIETLR 234
Query: 78 QSFLNEIRA 86
Q IRA
Sbjct: 235 QLIATRIRA 243
>gi|254500339|ref|ZP_05112490.1| Competence protein [Labrenzia alexandrii DFL-11]
gi|222436410|gb|EEE43089.1| Competence protein [Labrenzia alexandrii DFL-11]
Length = 801
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 21/264 (7%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HF I +GL+ N+L +P+ S +V+P G++A++LM L IP +M+ GL ++I IA
Sbjct: 466 HFSRIAPFGLVGNMLGMPVFSIIVMPMGVVALVLMPFGLAAIPLKIMSAGLAVLIRIAEF 525
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
+F GR+ + ++ V + I +G+ I + S PD
Sbjct: 526 TEQIAPDF--GRMGSLTGLSAAVLLAGFLGLLLAPGRFRMICLGLASIGIALAIISRPPD 583
Query: 223 LLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSL 282
+ I G +A D + S SF W E V E ++ + +
Sbjct: 584 IYIPATGPQLAARDFEGSLQMSSARSSFSVETW--------FEREGVSAEAIKSRK---M 632
Query: 283 KEILRSMQPRKFLCIKKSFC----VGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDI 338
K+ RS P C+ ++F VG + + + K +D CQ +D+++T + +
Sbjct: 633 KDDQRSCDPSG--CVVRAFAARGVVGVEHVPIHIALPKTRDAFFYDCQKADMIVTDM--V 688
Query: 339 NTKLCNVSLLITPEILQKQGSLEI 362
++C + + EI + +G++ I
Sbjct: 689 APEVCRAAEVFDREIRKARGAVSI 712
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS-SESHNTWTWKKISSIKQS 79
ARL PP GP PG +DF+F +Y+ GI A G+ Y P+++ + S + ++ ++Q
Sbjct: 190 ARLFPPMGPVVPGGYDFSFRAYFDGIGASGFSYGAPEIVQGPAPSQVLLLVRHVNGLRQH 249
Query: 80 FLNEIRANIGTYGSASASIFLI---------KHFHCIPVYGLIANILAIPILSFVVIPAG 130
I A + + ++ L+ K + GL A+ILAI L + G
Sbjct: 250 LAARISALLPEGPETALAVALLVGDRGGIDEKTEESLRAAGL-AHILAISGLHMALFAGG 308
Query: 131 LIAILLMILSLDNIPFGVMAW 151
A+ L L+L IP + W
Sbjct: 309 AYAVCLGTLAL--IPGLALRW 327
>gi|148255851|ref|YP_001240436.1| putative ComEC/Rec2 family protein [Bradyrhizobium sp. BTAi1]
gi|146408024|gb|ABQ36530.1| putative ComEC/Rec2 family protein [Bradyrhizobium sp. BTAi1]
Length = 762
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 117/237 (49%), Gaps = 25/237 (10%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT-----WTWKKISSIKQSFLNEIRANIG 89
F +F++ G+ A+ F +P++ + +S T W ++++ + L + A +
Sbjct: 409 FQMSFAATL-GLVALVQF-GLPRLFATPDSSVTERIALWGGRELAML---LLASLIAGLA 463
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM 149
T + + HFH I YG++AN+ A+P++S +V+PAGL+ +L LD + + +M
Sbjct: 464 T------TPYAAFHFHRITPYGVLANLAAMPVVSALVMPAGLLGLLAAPFGLDGLCWTLM 517
Query: 150 AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE---FLLMVFCKTNIRHIGSIMIG 206
WG+D +I + VA +GR+ +++ LL+ +T +R G+++I
Sbjct: 518 GWGIDWMIAVTR--WVAALPGAVGRVTAFGIGPLILASFGLLLIGLLRTPLRWSGAVLIA 575
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS-NYSNPPSFIFSQWKSALITP 262
I I + P PD+LIS G VA+ ++ + + F+ +W +A P
Sbjct: 576 IATIWSVSTP---QPDILISGDGRAVAVRGRDGRLHVMRTGKDVFVVKEWLAADADP 629
>gi|84503086|ref|ZP_01001182.1| competence protein [Oceanicola batsensis HTCC2597]
gi|84388630|gb|EAQ01502.1| competence protein [Oceanicola batsensis HTCC2597]
Length = 683
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
HF+ + YGL AN+LA+P++ +V+PAG++A++LM L L+ + VM WGLD+I+ IA
Sbjct: 426 AHFNTMAHYGLAANLLAVPLMGMLVMPAGVVAVVLMPLGLEALALTVMGWGLDVILFIAR 485
Query: 162 RISVAHNEFCIGRIP---ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+VA +G +P E L + + +R +G + + ++ +
Sbjct: 486 --TVASWPGAVGHVPAPGEWVLPLFAAGGLSLALWQGPLRWLGLVPL---LVAGGLWTQV 540
Query: 219 FSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
P +LI ++G LV ++ +N + + F+ W
Sbjct: 541 DRPGILIDDRGALVGVLGENGRALSRAKGAGFVAQVW 577
Score = 40.0 bits (92), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
A T+ A LSPP+GP PG FDF +++ + A+GY
Sbjct: 163 AGLTVMTTAHLSPPAGPVEPGGFDFQRHAWFARLGAVGY 201
>gi|115524577|ref|YP_781488.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris BisA53]
gi|115518524|gb|ABJ06508.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris BisA53]
Length = 765
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 124/263 (47%), Gaps = 37/263 (14%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HFH + YG+IAN+LA+P++S +V+PAGL+ +L M D + + +M G+D ++ +A
Sbjct: 462 HFHRVTPYGVIANLLAMPVVSALVMPAGLLGLLAMPFGFDGVFWHIMEVGIDWMVIVAQ- 520
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMV---FCKTNIRHIGSIMIGITIIILFTFPYSF 219
VA +GRI +++ L ++ +T +R+ G +++ +++ P
Sbjct: 521 -GVAALPGAVGRIAAFGAGPLLLASLGLIMIGLLRTPLRYAGGLLLVASVLWAIATP--- 576
Query: 220 SPDLLISEKGNLVALVDKNT---LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQE 276
PD+LI+ G VA+ + L+ + + +F+ +W +A D +
Sbjct: 577 QPDILIAADGRHVAVRGADAKLRLLQDGKD--AFLVKEWLAA------------DADGRA 622
Query: 277 KNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIR 336
+SL + ++ CV +V + + + + C+ + +LIT R
Sbjct: 623 VGDASLS---------NGVSCDEAACVAALADGRLVSLARWPEAVVEDCEKAAVLIT--R 671
Query: 337 DINTKLCNVSLLITPEILQKQGS 359
+ C +L I E L+++G+
Sbjct: 672 RPVPEGC-AALAIDAETLRREGA 693
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 17 IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+E ARL+PP P PG +DF Y++GI A G+
Sbjct: 186 VELKARLTPPLQPLRPGAYDFGRDLYFQGIGATGF 220
>gi|86138838|ref|ZP_01057410.1| competence protein [Roseobacter sp. MED193]
gi|85824485|gb|EAQ44688.1| competence protein [Roseobacter sp. MED193]
Length = 689
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 131/303 (43%), Gaps = 42/303 (13%)
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
A+ + F HF+ + YGLIAN+LA+PI+ VV+PA ++A+ L L + I + G
Sbjct: 426 GAATAPFGAAHFNVVSHYGLIANVLAVPIMGLVVVPAAVLAMCLAPLGGEQIGIFFLQSG 485
Query: 153 LDIIIHIAHRISV---AHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITI 209
L+ I+ +A +S + + I T+ F+L+ + +R G ++IG++
Sbjct: 486 LEWILAVAAWVSALPKPQSGVVMPGIWGLPLFTLGALFVLL--WQGRLRWAGFLLIGLSS 543
Query: 210 IILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHV 269
+ T+ P LLIS G LV ++ + +I ++W +A TP P +
Sbjct: 544 L---TWAQVERPLLLISANGGLVGVLTPQGRALSREKSQGYIAARWLAADGTPL---PQI 597
Query: 270 QKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSD 329
L + VG R I G KR + CQ +D
Sbjct: 598 TAAALWHSQIDA-----------------GGVWVGGRRVVHITG--KRHADVVTDCQPTD 638
Query: 330 ILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
++++ R C V + PE L++ GS+ I D+D + + + I + PW
Sbjct: 639 LIVSNRRLELGGDCEV---LGPERLRRSGSIRI-------DHDG-RMVTAADIAG-NRPW 686
Query: 390 TKH 392
++
Sbjct: 687 SRQ 689
>gi|154248290|ref|YP_001419248.1| ComEC/Rec2-related protein [Xanthobacter autotrophicus Py2]
gi|154162375|gb|ABS69591.1| ComEC/Rec2-related protein [Xanthobacter autotrophicus Py2]
Length = 757
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 119/266 (44%), Gaps = 33/266 (12%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
+ I HF + YGL+AN+ A+P +SF+V+P GL+ +LLM D++ + VM G++I++
Sbjct: 464 YGIFHFQRVAPYGLLANLAAMPAVSFMVMPFGLLGVLLMPFGFDHLAWPVMGKGIEIMVA 523
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVV-EFLLMVFC--KTNIRHIGSIMIGITIIILFTF 215
++ I+V GR+ T+ + L C + + + + + +++
Sbjct: 524 VSDAIAVLPG--ADGRVDPVGAPTLALFSLGLTALCLLRGWLTAVAIVPFALALLMSGAP 581
Query: 216 PYSFSPDLLISEKGNLVALVDKNTLISNY-SNPPSFIFSQWKSALITPFHEAPHVQKEDL 274
P PD+LI+ VA+ + +S + + QW + ++ D+
Sbjct: 582 PR---PDILIAPDAQTVAVRGPDGRLSVLGARSQRLVVEQWMT------------REGDM 626
Query: 275 QEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITT 334
++ L + F C C + V +R + + C S I++T
Sbjct: 627 RKAGAEGLAAL--------FTC-DPLGCTAPLPGGGTIAVSRRAESLEADCLESRIVVT- 676
Query: 335 IRDINTKLCNVSLLITPEILQKQGSL 360
RD+ + C ++TPE LQ+ G+L
Sbjct: 677 -RDVPPRRCPAQ-VVTPETLQRTGTL 700
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ K + P P T + +A+L PP GPA PG DF + ++ GI +GY PK+
Sbjct: 179 LTLRKGWAP-PVGTHVTQLAQLLPPLGPAMPGAHDFGRNPWFAGIGGVGYGLGRPKLAEP 237
Query: 62 SESH-NTWTWKKISSIKQSFLNEIRANI 88
+E + + +++ S IRA++
Sbjct: 238 AEPPLSVRLAMAVEAVRDSLSRRIRASL 265
>gi|312115926|ref|YP_004013522.1| ComEC/Rec2-related protein [Rhodomicrobium vannielii ATCC 17100]
gi|311221055|gb|ADP72423.1| ComEC/Rec2-related protein [Rhodomicrobium vannielii ATCC 17100]
Length = 729
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 127/297 (42%), Gaps = 34/297 (11%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F HFH + Y + N++ P + F+ +PA ++A++ M L++ P VM G+D ++
Sbjct: 447 FSAYHFHTLTTYAALGNLVGGPPVDFIAMPAMIVALIAMPFGLEDAPLAVMGVGVDAMMA 506
Query: 159 IAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+AH + + + + P + + IV L +V + + R +G +IG+ + +
Sbjct: 507 VAHWVGGLPGSTVPVAAFPFAALLLIVSGGLWLVIWRRSWRVLGLGLIGVGVAMTSIHA- 565
Query: 218 SFSPDLLISEKGNLVALVDK-NTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQE 276
PD+L+ LVAL D+ L + + S+ QW A D ++
Sbjct: 566 --RPDILVDRDAKLVALRDREGRLQAPKTRRASYALQQWLRA------------DGDTRK 611
Query: 277 KNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIR 336
+++ + C + S CV + +V ++ R D I C+ + IL+ +
Sbjct: 612 PKEAATGA--------GWQCDRTS-CVSMVKGR-LVSLIARPDAIEEDCRRAAILVMPM- 660
Query: 337 DINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
D+ L++ L ++G+ I++ D + ++ PW+ R
Sbjct: 661 DLARPCPAPKLVLDRGALWERGATAISL------GDGALAVTTASEGRGDRPWSPTR 711
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S+ D P E I A L PP P PG +DF +SYY+ + GY + P+ I
Sbjct: 163 VSLRGDVDLRPGEA-IRFRAILGPPPEPVMPGGYDFARASYYQAVGGSGYSLTKPERI-- 219
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIG 89
W + +++L ++R IG
Sbjct: 220 --EGRALPWDM---VPRTWLADLRGRIG 242
>gi|319899025|ref|YP_004159118.1| Competence protein [Bartonella clarridgeiae 73]
gi|319402989|emb|CBI76544.1| Competence protein [Bartonella clarridgeiae 73]
Length = 757
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 133/302 (44%), Gaps = 38/302 (12%)
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
++ I+ HF + + G+I+N LA+PI+S +IP GLI+ M L+ +P +M +G
Sbjct: 485 ASGIYAAYHFSNVALLGVISNTLALPIVSIFIIPFGLISAFAMFFGLEWLPLKIMGFGTS 544
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI-GITIIILF 213
++I IA+ + G IP ++ + + + + + F KT IR S I G ++ +
Sbjct: 545 LMIKIAYAVKAISPVLNPGFIPLSALILLSIGLVGLTFLKTAIRFFFSFFILGGILVCMM 604
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKED 273
P L+I++ +V +++ + L + +P F S W+ + + K
Sbjct: 605 QSPV----QLIIADNMKIVGVLNNDILYIDRYHPSKFTTSIWEKSF--------RINKTI 652
Query: 274 LQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILIT 333
K SL +F+C + C + + +L R+ C +DI+I
Sbjct: 653 KPTKVGPSLNG--------QFIC-DDNICTTLLENGFKIAILYRETD---HCVKADIIIR 700
Query: 334 TIRDINTKLCNV--SLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
N + CN ++ TP+ L +GS+ +T N N SA + PW
Sbjct: 701 KFTTSN-QTCNAINAITFTPQQLLSRGSVILT----KNKNT----FWSSA--GFYRPWNI 749
Query: 392 HR 393
HR
Sbjct: 750 HR 751
>gi|121601648|ref|YP_988909.1| competence protein [Bartonella bacilliformis KC583]
gi|120613825|gb|ABM44426.1| competence protein [Bartonella bacilliformis KC583]
Length = 757
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 136/307 (44%), Gaps = 48/307 (15%)
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
++ I+ HF + + +I+N LA+PI+S +V+P GLIA M+L + +P +M +G+
Sbjct: 485 ASGIYAAYHFTNVAPFSIISNALALPIVSILVMPFGLIAAFAMLLEFEWLPLQIMGFGIS 544
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
++ IA+ I+ G IP ++ + + + + + F KT++R I I ++
Sbjct: 545 LVTKIAYSITAISPVINPGFIPLSTLILLSLGLVGLTFFKTSLRFFFIIF---IFIGIWV 601
Query: 215 FPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSAL-----ITPFHEAPHV 269
+ L+I++ NLV ++++ L ++ S F S W+ + I P P +
Sbjct: 602 YVMRSPVQLIIADNMNLVGIINEKILYADRSRVSKFTKSVWEKSFYINETIKPTKIGPAL 661
Query: 270 QKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVL-KRKDMIRLSCQLS 328
+ F+C + C + + V VL K D C S
Sbjct: 662 NGQ---------------------FVC-DDNICTALLENGLKVVVLYKETD----QCIKS 695
Query: 329 DILITTIRDINTKLCN--VSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLH 386
D++I T ++ K CN ++ TP+ L +GS+ + + D + + H
Sbjct: 696 DVIIQT-SIMHDKTCNDVAGIVFTPQQLLSRGSVMMM-----KNKDIIWYYTA-----FH 744
Query: 387 FPWTKHR 393
PW HR
Sbjct: 745 RPWNVHR 751
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN--TWTWKKISSI 76
G RL SGP PG +DF+F +Y+ I A G ++ P I S+ +KI ++
Sbjct: 215 GKVRLRALSGPVRPGSYDFSFHNYFNRIGAQGTYFGKPIKISVSQPDTILGMASQKIENL 274
Query: 77 KQSFLNEIRANI-GTYGSASASI 98
+ IR I G GS +A++
Sbjct: 275 RMKMTQRIRTKISGEEGSVAAAL 297
>gi|27379941|ref|NP_771470.1| hypothetical protein bll4830 [Bradyrhizobium japonicum USDA 110]
gi|27353094|dbj|BAC50095.1| bll4830 [Bradyrhizobium japonicum USDA 110]
Length = 776
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 141/315 (44%), Gaps = 48/315 (15%)
Query: 59 IYSSESHNT------WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL 112
+++S H+ W ++I+ + FL + A + T + + HFH + +G+
Sbjct: 443 LFASPDHSATARIAMWGGREIAML---FLASLIAGLAT------TPYAAFHFHRVTPFGV 493
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI 172
+AN+ A+P++S +V+PAGL+ +L LD + + +M G+D ++ ++ VA +
Sbjct: 494 LANLGAMPVVSALVMPAGLLGLLAAPFGLDGVFWWLMGIGIDWMVAVSR--WVAALPGAV 551
Query: 173 GRIPETSFVTIVVEFL---LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKG 229
GRIP ++ L +M +T +R G++++ + I+ PD+LI+ G
Sbjct: 552 GRIPAFGIAPLIAASLGIIVMGLLRTPLRWSGALVLLVAILWGLA---DRQPDILIAGDG 608
Query: 230 NLVALVDKNTLISN-YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRS 288
VA+ ++ + +N F+ +W +A D ++ SL
Sbjct: 609 QSVAVRGRDGHLQMIRANKDGFLLKEWLAA------------DADPRDAGSPSLA----- 651
Query: 289 MQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLL 348
+ ++ CV +V + R D + C + L+ T R C V+++
Sbjct: 652 ----AGVSCDEAGCVTPLADGRLVALALRIDALADDCSRA-ALVVTARPAPAD-C-VAMV 704
Query: 349 ITPEILQKQGSLEIT 363
+ + L QG+L +T
Sbjct: 705 VDRQRLAAQGALALT 719
>gi|90419607|ref|ZP_01227517.1| putative ComEC/Rec2-related protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336544|gb|EAS50285.1| putative ComEC/Rec2-related protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 791
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 131/309 (42%), Gaps = 36/309 (11%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
GSA+A + HFH + +G +AN+L +P+ + ++P L+ LL+ LD P+ M
Sbjct: 470 GSATAP-YAAYHFHRLATFGFVANLLTMPLFTLWIMPLALVGTLLIPFGLDAWPYQAMGA 528
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
GL +++ IA + + IGR+ + + + L + +R +G + ++
Sbjct: 529 GLWLVLEIARNVYAWLPDQAIGRMTASGLLLLTAAILTASCLASRLRWLGLPLALAGLVA 588
Query: 212 L--FTFPYSFSPDLLISEKGNLVA-LVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPH 268
T P P+LL+ E G VA L L P SFI QW+ A EA
Sbjct: 589 APDRTAP----PELLVFEDGKEVATLAADGQLAFLRPRPSSFIAEQWERAF-----EARA 639
Query: 269 VQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRL--SCQ 326
+ D + + E C K +C R + V+ +D R +C
Sbjct: 640 PRGADTERIRATISAE-----------CAAK-YCRFTTRGGLR--VIWTEDYARTGDACD 685
Query: 327 LSDILITTIRDINTKLCNV-SLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENL 385
+D+ I + R I C ++L+T L++ GSL I S + + I A+ +
Sbjct: 686 EADVAIVS-RAIRLAECRSGAVLVTLRTLRRTGSLAI-----SREAATGRPRIVKAVRDP 739
Query: 386 HFPWTKHRI 394
W HR+
Sbjct: 740 PERWNVHRL 748
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPK 57
+ +++P G+ RL PPSGPAFPG +DF + ++ GI A GY P+
Sbjct: 185 VGSRHEPIAPGGLYRGLVRLGPPSGPAFPGSYDFAMAPFFAGIGAYGYSLGAPE 238
>gi|13470827|ref|NP_102396.1| DNA uptake protein [Mesorhizobium loti MAFF303099]
gi|14021570|dbj|BAB48182.1| DNA uptake protein [Mesorhizobium loti MAFF303099]
Length = 753
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 129/304 (42%), Gaps = 19/304 (6%)
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
+ ++F I HF + L AN+ +PI+S V+ A + + LLM LD +M GL
Sbjct: 441 ATALFAIWHFQRVSPLSLFANLAVMPIVSVVMFLA-VASALLMPFGLDAPTLYLMGKGLT 499
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
+I I+ IS +G I S + + + ++ T +R + + L T
Sbjct: 500 AMIAISAWISERSPVDAVGLISLQSVLLVTIALVIATMATTWLRLAA---VPFALAGLLT 556
Query: 215 FPYSFSPDLLISEKGNLVAL-VDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHV-QKE 272
+ +PD+LISE LVAL + L + + P F WK AL++ P + K
Sbjct: 557 VSDTRTPDVLISEDARLVALPIGGGELAVSRARPNEFTVDNWKRALVSETIVVPEMFDKA 616
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVG-VLKRKDMIRLSCQLSDIL 331
D Q + + + F C C+ H S I+ V RKD + +C +D++
Sbjct: 617 D----GQFDIADAVNLPPGAPFYC-TDGVCLARHPSGAIIAHVEDRKDTWK-ACGFADLI 670
Query: 332 ITTIRDINTKLCN--VSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ C+ + L++T L ++GS + + + A++ + PW
Sbjct: 671 VVN-DATGYDACHNPLVLVVTKRQLARKGSAAVFF---DRQSATGPLTVSFAVDGPYRPW 726
Query: 390 TKHR 393
+ R
Sbjct: 727 HEQR 730
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
A + + G A+L PP+GP P +DF+F SY+ GI G+F PK++ +++ T +
Sbjct: 163 AGSLVTGYAKLLPPTGPVRPDSYDFSFDSYFAGIGGSGFFLGNPKLVSATDDEVPLTARL 222
Query: 73 ISSI---KQSFLNEIRANIGTYGSASASIFLIKHFHCIP 108
S I +++ + IRA +G A+ ++ IP
Sbjct: 223 FSGIENAREAIADHIRATVGGAEGEIAAALIVGVRAGIP 261
>gi|319783656|ref|YP_004143132.1| ComEC/Rec2-related protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169544|gb|ADV13082.1| ComEC/Rec2-related protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 820
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 129/305 (42%), Gaps = 16/305 (5%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
GSA+ ++F I HF + L AN+ +PI++ V+ A + + LLM LD +M
Sbjct: 503 GSAT-TLFAIWHFQRVSPLSLFANLAVMPIVTVVMFLA-VASALLMPFGLDWPALYLMGK 560
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
GL ++I I+ IS +G I + S + + + ++ T +R + +
Sbjct: 561 GLTMMIAISGWISERSPVDGVGLISQQSVLLVAIALVIATMATTWLRLAA---LPFALAG 617
Query: 212 LFTFPYSFSPDLLISEKGNLVAL-VDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQ 270
L T + +PD+LISE LVAL + L + P F WK AL + P V
Sbjct: 618 LLTVSDTRTPDVLISEDARLVALPIGGGELAVSRQRPNEFTVDNWKRALTSETIVVPEVF 677
Query: 271 KEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVG-VLKRKDMIRLSCQLSD 329
Q + + + F C CV H S I+ V RKD + +C ++
Sbjct: 678 D---NSDGQFDVADAVELPPGSPFYC-SSGVCVARHMSGAIIAYVEDRKDTWK-ACGFAE 732
Query: 330 ILITTIRDINTKLCN-VSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFP 388
+++ N + L+IT L ++GS + + I A+++ + P
Sbjct: 733 LIVVNDATAYDACHNPLVLVITKRQLARKGSAAVFF---DRQSATTPATISFAVDSPYRP 789
Query: 389 WTKHR 393
W R
Sbjct: 790 WHTQR 794
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 12 PAETT----IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
PA+ T I G A+L PP+GP P +DF+F SY+ GI G+F PK++ + +
Sbjct: 222 PADVTAGSLITGYAKLLPPTGPVRPDSYDFSFDSYFAGIGGSGFFLGNPKLVVTDDGDMP 281
Query: 68 WTWKKISSI---KQSFLNEIRANIGTYGSASASIFLIKHFHCIP 108
+ + SS+ ++ + IRA++G A+ ++ IP
Sbjct: 282 LSARISSSVENAREGIADHIRASVGGAEGEIAAALIVGVRAGIP 325
>gi|254462665|ref|ZP_05076081.1| competence protein [Rhodobacterales bacterium HTCC2083]
gi|206679254|gb|EDZ43741.1| competence protein [Rhodobacteraceae bacterium HTCC2083]
Length = 684
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 20/241 (8%)
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
IK + ++ A + T A+A HF+ I +GLIAN+ ++P++ +VIP ++A+
Sbjct: 399 IKGTVISSAVAGLATLPIAAA------HFNNIAQFGLIANLASVPLMGILVIPLAVVAVC 452
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET---SFVTIVVEFLLMVF 192
L+ + L+ +P VM WGLD I+ +A +S + I ++P +++TI L +
Sbjct: 453 LLPVHLEWLPLTVMGWGLDWILSVAREVS--SWDGAIHKVPAPPSWAYLTICFGLLGLAL 510
Query: 193 CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIF 252
+ R + I ++ +F + PD+LIS+ G LV ++ + F+
Sbjct: 511 MISKFRFVALAPI---VVGVFGWVTDQRPDILISDTGVLVGVLGAEGRALSKEKGAGFVA 567
Query: 253 SQWKSALITP-FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVI 311
W P F A + + + + + I + R GC SD+
Sbjct: 568 GVWLENDGDPSFQRAAARRWDGPKGATRIGVHVIFAAAGKRGLDAFD-----GCKASDIA 622
Query: 312 V 312
V
Sbjct: 623 V 623
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 8 YDPFPAETTIEG-----IARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
Y + E I G A LSPP+GPA P FDF +++ I +GY
Sbjct: 144 YGSYADERPIAGARVMTTAHLSPPAGPAEPHGFDFQRHAWFTQIGGVGY 192
>gi|254469565|ref|ZP_05082970.1| competence protein [Pseudovibrio sp. JE062]
gi|211961400|gb|EEA96595.1| competence protein [Pseudovibrio sp. JE062]
Length = 859
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 136/289 (47%), Gaps = 16/289 (5%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HF I YG++ N+LA+P+++FVV+P GL+A+L + L D M GL +++ A+
Sbjct: 541 HFEQIAPYGVVGNVLAMPLVTFVVMPLGLLALLTIPLGADAFFLQGMEVGLSLVLKAAYW 600
Query: 163 ISVAHNEFC-IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+S + +G + ++ +++ +++ ++ + + +I F P
Sbjct: 601 VSALSDGLTNLGVASVSGYLLVILASIILCIMPLRLKWLSVPVFAAGLI---GFVVERPP 657
Query: 222 DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSS 281
D++I++ G + ++ S+ SF S L + A ++ + ++S
Sbjct: 658 DVMIADAGKHIGFYGEDGSFRLTSSRISFAAD---SLLRAGGYSANSFKEHKTRAADRSC 714
Query: 282 LKE-ILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINT 340
+E + ++ P + + G + V++ K + +++ CQL+ I++T + ++
Sbjct: 715 DEEGCVLALYPHRAIG-----GGGEQKPSVVLAQSKVEGVLKADCQLASIIVTQAQAPSS 769
Query: 341 KLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
CN L++ + ++GS+ I + + K+K ++ A + PW
Sbjct: 770 --CNAELVLDQKTFGERGSVYIWLSDQAESGHKIK-KVRWAYDAQRRPW 815
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
ARL PP G PG +DF ++++ GI A+GY S P M+ + T + + +I+
Sbjct: 266 ARLLPPGGAVRPGGYDFARTAFFDGIGAVGYALSRPVML--ARDGGTGFLQHVDTIRSGI 323
Query: 81 LNEIR 85
IR
Sbjct: 324 AGRIR 328
>gi|260459229|ref|ZP_05807484.1| ComEC/Rec2-related protein [Mesorhizobium opportunistum WSM2075]
gi|259034783|gb|EEW36039.1| ComEC/Rec2-related protein [Mesorhizobium opportunistum WSM2075]
Length = 817
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 132/312 (42%), Gaps = 30/312 (9%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
GSA+A +F I HF + L AN+ +PI+S V+ A + + LLM LD +M
Sbjct: 502 GSATA-LFAIWHFQRVSPLSLFANLAVMPIVSVVMFLA-VASALLMPFGLDAPSLYLMGK 559
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
GL +I I+ IS +G I + S + + + ++ T +R + +
Sbjct: 560 GLTAMIAISAWISERSPVDAVGLISQQSVLLVTIALVIATMATTWLRLAA---LPFALAG 616
Query: 212 LFTFPYSFSPDLLISEKGNLVAL-VDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHV- 269
L + +PD+L+SE LVAL + L + + P F WK AL + P +
Sbjct: 617 LLAVSDTRTPDVLVSEDARLVALPIGGGELAVSRARPNEFTVDNWKRALTSETIIPPEMF 676
Query: 270 QKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVG-VLKRKDMIRLSCQLS 328
K D Q + + + F C C+ H S I+ V RKD + +C +
Sbjct: 677 DKAD----GQFDIADAVNLPPGAPFYC-TDGVCLARHPSGAIIAHVEDRKDTWK-ACGFA 730
Query: 329 DILITTIRDINTKLCN-VSLLITPEILQKQGSLEI------TIIPPSNDNDKVKFIIKSA 381
D++I N + L++T L ++GS I PP+ I A
Sbjct: 731 DLIIVNDATAYDACHNPLVLVVTKRQLARKGSAAIFFDRQSATGPPT---------ISFA 781
Query: 382 IENLHFPWTKHR 393
+++ + PW R
Sbjct: 782 VDSPYRPWHAQR 793
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
A + I G A+L PP+GP P +DF+F SY+ GI G+F PK++ + + + +
Sbjct: 226 AGSLITGYAKLLPPTGPVRPESYDFSFDSYFAGIGGSGFFLGNPKVVAADDGGMPLSARL 285
Query: 73 ISSI---KQSFLNEIRANIGTYGSASASIFLIKHFHCIP 108
S I +++ + IR ++G A+ ++ IP
Sbjct: 286 SSGIENAREAIADHIRGSVGGAEGEIAAALIVGVRAGIP 324
>gi|319407357|emb|CBI81004.1| Competence protein [Bartonella sp. 1-1C]
Length = 754
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 93/187 (49%), Gaps = 11/187 (5%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
GSAS I+ HF + + G+I+N LA+PI+S ++P GL++ M L+ P +M +
Sbjct: 483 GSASG-IYAAYHFSNVALLGVISNALALPIVSIFIMPFGLLSAFSMFFGLEWWPLQIMGF 541
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR-HIGSIMIGITII 210
G +++I IA+ I G IP ++ + + + + + F KT IR G ++G ++
Sbjct: 542 GTNLMIKIAYAIQAISPVLNPGFIPLSALILLSIGLVGLTFLKTAIRLFFGFFILGGILV 601
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSAL-----ITPFHE 265
+ P L+I++ +V +++ L + +P F S W+ + I P
Sbjct: 602 CMMQSPV----QLIIADNMKIVGVLNDKILYVDRYHPSKFTISLWEKSFRINKTIKPTKI 657
Query: 266 APHVQKE 272
P ++ +
Sbjct: 658 GPSLKGQ 664
Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI--YSSESHNTWTWKKISSI 76
G +L SG PG +DF+F +Y+K I A G++ PK I + + +KI ++
Sbjct: 215 GKVKLRALSGAIRPGSYDFSFHNYFKRIGAQGFYLGKPKKISVFQPDMMLGKVLQKIENL 274
Query: 77 KQSFLNEIRANIGTYGS 93
+ ++ +G G
Sbjct: 275 RMQMTEKVIKTVGGEGG 291
>gi|85716979|ref|ZP_01047942.1| ComEC/Rec2-related protein [Nitrobacter sp. Nb-311A]
gi|85696181|gb|EAQ34076.1| ComEC/Rec2-related protein [Nitrobacter sp. Nb-311A]
Length = 735
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 149/354 (42%), Gaps = 55/354 (15%)
Query: 54 SIPKMIYSSESHNT-----WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP 108
+PKM+ + + T W ++I+ + L A + T + ++ HFH +
Sbjct: 388 GMPKMLATPDHSPTAKAALWGGREIAMLA---LASFVAGLAT------TPYVAFHFHRVT 438
Query: 109 VYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
YG++AN+LA+P++S +V+P GL+ + M D + + +M +G++ ++ +A V
Sbjct: 439 PYGMVANLLAMPVVSALVMPVGLLGLAAMPFGFDGVFWRLMDFGIEWMVAVAQ--GVTEL 496
Query: 169 EFCIGRIP---ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
IGR+ + +L+ +T +R G ++ G+ + + PD+LI
Sbjct: 497 PGAIGRVSAFGAGPLLAATAGIILLGLLRTPLRWSGVVISGLAVAWSLA---ATPPDILI 553
Query: 226 SEKGNLVALVDKNTLISNYS-NPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKE 284
S +G VA+ ++ + S SF +W +A D + +L E
Sbjct: 554 SAEGRNVAVRGEDGRLRLVSAGKDSFAVREWLAA------------DGDERGPADPALAE 601
Query: 285 ILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCN 344
+ CV +V + +R + +R C +++++T + C
Sbjct: 602 ---------GVSCDDEGCVVKLSGGGLVALTRRPEAMRDDCVRAELMVTQWE--APEGCR 650
Query: 345 VSLLITPEILQKQGSLEITIIP-------PSNDNDKVKF-IIKSAIENLHFPWT 390
+I L+++G+L + P ++ + +F ++ L PW+
Sbjct: 651 AQ-VIDRNRLRREGALALWRAPGASGSGVSTDSTSRPRFAVVAVRPAGLERPWS 703
>gi|319405824|emb|CBI79456.1| Competence protein [Bartonella sp. AR 15-3]
Length = 754
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 97/193 (50%), Gaps = 11/193 (5%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
GSAS I+ HF + + G+I+N+LA PI+S +IP GL+++ M L L+ P VM +
Sbjct: 483 GSASG-IYAAYHFSNVALLGIISNVLAFPIVSIFIIPFGLLSVFSMFLGLEWWPLQVMGF 541
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
G ++I IA+ + G IP ++ + + + + + F KT IR I I++
Sbjct: 542 GTSLMIKIAYVVKAISPVLNPGFIPLSALILLSIGLVGLTFLKTAIRFFFGFFILGGILV 601
Query: 212 LFTFPYSFSP-DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSAL-----ITPFHE 265
SP L+I++ +V +++ + L ++ +P F S W+ + I P
Sbjct: 602 CIM----QSPIQLIIADNMKIVGVLNDDILYIDHYHPSKFTISLWEKSFRINKTIKPTKI 657
Query: 266 APHVQKEDLQEKN 278
P ++ + + + N
Sbjct: 658 GPSLKGQFICDDN 670
Score = 40.0 bits (92), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPK--MIYSSESHNTWTWKKISSI 76
G +L SG PG +DF+F +Y+K I A G++ PK +++ + +KI ++
Sbjct: 215 GKVKLRALSGAIRPGSYDFSFHNYFKRIGAQGFYLGTPKKILVFQPNTMLGTVLQKIENL 274
Query: 77 KQSFLNEI-RANIGTYGSASASI 98
+ ++ +A G G SA++
Sbjct: 275 RMQMTEKVSKAVGGEEGKVSAAL 297
>gi|86749927|ref|YP_486423.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris HaA2]
gi|86572955|gb|ABD07512.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris HaA2]
Length = 764
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 146/345 (42%), Gaps = 50/345 (14%)
Query: 54 SIPKMIYSSESHNT-----WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP 108
+P + +++S T W ++I+ + L + A + T + + HFH +
Sbjct: 421 GMPALFATADSSTTARAALWGGREIAMLA---LASLVAGLAT------TPYAAYHFHRVT 471
Query: 109 VYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
YG+IAN+LA+P++S VV+PAGL+ + M LD + + +M G+D +I +A + VA
Sbjct: 472 PYGVIANLLAMPVVSVVVMPAGLLGLAAMPFGLDGVFWRIMEIGIDWMIVVA--LWVAAL 529
Query: 169 EFCIGRIPETSFVTIVVEFL---LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
IGRI +++ L L+ +T +R+ G ++ P PD+LI
Sbjct: 530 PGAIGRIAAFGTGPLLLASLGIVLLGLLRTPLRYGGLALLAFATGWALLTP---QPDILI 586
Query: 226 SEKGNLVALVDKNTLIS-NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKE 284
+ G VAL + + S SF QW +A D + + +SL+E
Sbjct: 587 AGDGRQVALRGPDGRLRLMQSGGDSFRVKQWLAA------------DADPRAVDAASLRE 634
Query: 285 ILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCN 344
+ CV +V + R D I C + ++I + C
Sbjct: 635 ---------GVSCDADGCVAALADGGLVALSFRADGIGDDCARAKLVIALAQPPPD--CA 683
Query: 345 VSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
L+ T E+L +L + P+ D + V ++ + PW
Sbjct: 684 ARLIST-EMLAGSAALALRRH-PAGDGEFVTEAVRPIARDR--PW 724
>gi|163731992|ref|ZP_02139438.1| competence protein, putative [Roseobacter litoralis Och 149]
gi|161394290|gb|EDQ18613.1| competence protein, putative [Roseobacter litoralis Och 149]
Length = 690
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 13/227 (5%)
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
G G A+A + HF+ I YGLIAN+L++P++ VV+PA ++A+ L L LD + +
Sbjct: 414 GISGLATAPVG-AAHFNTISHYGLIANLLSVPVMGSVVVPAAVLALCLAPLGLDWLGLWI 472
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV-TIVVEFLLMVFCKTNIRHIGSIMIGI 207
M GL I+ + ++ P + I + FL +V + R IG + +
Sbjct: 473 MGVGLRWILEVGAFVAALDGARSYVAGPGAVVLPMIALGFLWLVLWQGRARLIGVVPV-- 530
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
I+ + + P LI+E G LV ++ +N + FI W ++
Sbjct: 531 -ILAFLLWQGTVRPMGLIAENGTLVGVMTENGRALSKPKGAGFIARNWLE------NDGD 583
Query: 268 HVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV--GCHRSDVIV 312
+ D + S +L L K++ GC + D++V
Sbjct: 584 ATGQVDAAGRWNSGAAGLLPDGGKLMHLSGKRAAAAFEGCGKQDILV 630
>gi|126726369|ref|ZP_01742210.1| competence protein [Rhodobacterales bacterium HTCC2150]
gi|126704232|gb|EBA03324.1| competence protein [Rhodobacterales bacterium HTCC2150]
Length = 699
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
TW ++ Q + + A+ G A+A F HF+ I +GLIAN+ ++P++ +V+P
Sbjct: 409 TWPRLPKFLQPIIG-VAASSAIAGLATAP-FGAAHFNQIAQFGLIANLASVPVMGLIVMP 466
Query: 129 AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV-VEF 187
++A L I VM G+ I+ +A ++ P+T+ + I+ +
Sbjct: 467 GAVLAGCLAPFGGAWIGLWVMKIGISWILSVAEFVAAMDGAVTYIPRPDTAVLPILSLGM 526
Query: 188 LLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNP 247
L ++ + +R +G + G+ IL F P +L+SE GNL L+ K I +++
Sbjct: 527 LFLIVWRGRVRWLG--VGGVMAAILLWFQVE-RPQMLVSESGNLFGLMSKQGRILSHAKG 583
Query: 248 PSFIFSQW 255
F+ S W
Sbjct: 584 DGFVASAW 591
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
T+ LS PSGP PG FDF S++ G+ +GY
Sbjct: 174 TLMTTGHLSQPSGPVEPGGFDFQRHSWFIGLGGLGY 209
>gi|254466483|ref|ZP_05079894.1| competence protein [Rhodobacterales bacterium Y4I]
gi|206687391|gb|EDZ47873.1| competence protein [Rhodobacterales bacterium Y4I]
Length = 689
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 117/262 (44%), Gaps = 30/262 (11%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HF+ +P YGL+AN+LA+P++ VVIPA ++A+ L+ L+ I VM WG+D I+ +A
Sbjct: 414 HFNTLPHYGLLANLLAVPVMGTVVIPAAVLALCLLPAGLEGIGLTVMRWGMDWILAVART 473
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
+S P+++ + + MVF + + L+ + + P
Sbjct: 474 VSGFEGAVSHVTAPDSAVLPLFASG--MVFAVIWQGRLRLAGLLPAAAALWIWSGAERPP 531
Query: 223 LLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSL 282
++I+ G L+ +++ + + F W D + +++
Sbjct: 532 VIIASSGGLIGVMEAEGRALSRAKGQGFTAGIWLE------------NDGDAATQPEAAA 579
Query: 283 KEILRSMQPRKFLCIKKSFCVGCHRSDV-IVGVLKRKDMIRLS-CQLSDILITTIRDINT 340
+ +R + V H + V +V ++++++ S C+ DI+++
Sbjct: 580 RWKVRD----------GALPV-WHGAGVRLVHAPGKRELLQASNCKEGDIVVSAAAGAAP 628
Query: 341 KLCNVSLLITPEILQKQGSLEI 362
C L++TP IL++ GS+ +
Sbjct: 629 GGC---LVLTPGILRQTGSIAV 647
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S+T + P + A L PP GPA PG FDF +++K + +GY +P ++
Sbjct: 139 ISLTGQDAVPPPGALVMTTAHLLPPQGPAEPGGFDFRRHAWFKQLGGLGY-TRVPVLLAG 197
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
+ + + + Q I G + +A
Sbjct: 198 APGDSVPVERLRREMAQHLQQRIPGETGGFAAA 230
>gi|99080975|ref|YP_613129.1| ComEC/Rec2-related protein [Ruegeria sp. TM1040]
gi|99037255|gb|ABF63867.1| ComEC/Rec2-related protein [Ruegeria sp. TM1040]
Length = 672
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 119/268 (44%), Gaps = 34/268 (12%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F HF+ I YGL+AN+ A+P++ VV+P ++AI L + + F +M+ G+ I+
Sbjct: 411 FGAAHFNMISHYGLLANLAAVPVMGAVVVPGAVLAICLAPIGASAVGFWIMSQGIAWILK 470
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+A ++ PE + ++V L ++ + R G I I + +++ +P+
Sbjct: 471 VAETVATWPGARGHVVAPEAWILPVLVAGALWLLLWQGRFRWAGLIPIALALVV---WPF 527
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEK 277
S P++LIS G LV ++ + + + SF+ W + D
Sbjct: 528 SPRPEVLISADGGLVGVMTETGRALSRPSGKSFVAGIW--------------LENDGDGM 573
Query: 278 NQSSLKEIL---RSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDM--IRLSCQLSDILI 332
+Q+ + R + + F I + F V VL + + + SC +++I
Sbjct: 574 DQARAYRRIPEGRDGKVQIFQSIGRRF----------VHVLGKTGLRAWQPSCARGEVII 623
Query: 333 TTIRDINTKLCNVSLLITPEILQKQGSL 360
+I ++ L +TP L++ GS+
Sbjct: 624 LSI-EVEPPAAGDCLWLTPRQLRETGSI 650
Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+S+ + P P + A LSPP GPA PG FDF +++ G+ A+GY
Sbjct: 138 ISLFEGSAPMPGSWVMT-TANLSPPQGPAEPGGFDFRRHAWFLGLGAVGY 186
>gi|90423953|ref|YP_532323.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris BisB18]
gi|90105967|gb|ABD88004.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris BisB18]
Length = 774
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 139/315 (44%), Gaps = 47/315 (14%)
Query: 54 SIPKMIYSSESHNT-----WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP 108
+PK++ S ++ T W ++I + L + A + T + + HFH +
Sbjct: 425 GMPKLLASPDNSATARAALWGAREIMVLG---LASLVAGLAT------TPYAAFHFHRVT 475
Query: 109 VYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
YG++AN+LA+P++S +V+PAGL+ + M D + + +M G+D +I +A VA
Sbjct: 476 PYGVLANLLAMPVVSALVMPAGLLGLAAMPFGFDGVFWRLMDIGIDWMIVVAE--GVAAL 533
Query: 169 EFCIGRIP---ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
+GR+ + + +L+ +T +R G+ ++G+ I P PD+L+
Sbjct: 534 PGAVGRVAAFGSGPLLASTLGLILLGLLRTPLRLSGAAVLGLAIGWALLTP---QPDILV 590
Query: 226 SEKGNLVALVDKNTLISNYSN-PPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKE 284
+ G VA+ + + + +F+ +W +A D + SSL E
Sbjct: 591 AADGRHVAVRGADGRLRVMQDGKDAFLLKEWLAA------------DADGRAVTDSSLAE 638
Query: 285 ILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCN 344
+ + CV +V + +R + + C+ LI T+R C
Sbjct: 639 ---------GVSCDAAGCVAPLPDGGLVALARRPEAVAEDCERVR-LIVTLRQPPAD-C- 686
Query: 345 VSLLITPEILQKQGS 359
+ +I + L++QG+
Sbjct: 687 AAPVIDQDSLRRQGA 701
>gi|319408414|emb|CBI82069.1| Competence protein [Bartonella schoenbuchensis R1]
Length = 653
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 165/363 (45%), Gaps = 42/363 (11%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
F +FS+ I+ G+ +S + Y+ + ++ + + S L I + GSA
Sbjct: 315 FQMSFSATAALIAVFGW-WSERRSSYTGRTTPSYVGGGVLRLVLSPLILICVSSLVAGSA 373
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
S I+ HF + G+I+NILA+PI+ V+P GLIA M++ L+++P +M +G+
Sbjct: 374 SG-IYAAYHFANVAPLGMISNILALPIVFIFVMPFGLIAAFAMLVGLESLPLQIMGFGIS 432
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
++ IA+ ++ F G +P ++ V + + + + F KT IR SI I I I +
Sbjct: 433 LVTKIAYAVTAISPAFHPGFMPLSALVLLSLGLVGLTFLKTPIRFFFSIFIFIGIFVCMV 492
Query: 215 FPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDL 274
S L+I+ +LV ++++ L + F S W+++ H Q
Sbjct: 493 ---SSPVQLIIANNMSLVGIINERKLYIDRYYASKFTLSIWENSF--------HAQNAIK 541
Query: 275 QEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI-- 332
+ SL +F+C + C + + V VL K C +DI+I
Sbjct: 542 PTETGPSLNG--------QFIC-NDNICTAFLENKLKVAVLHGKTD---QCITADIVIEA 589
Query: 333 TTIRDINTKLCN--VSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
+TIR+ ++C+ + T + L +GS+ +T K II S+ H PW
Sbjct: 590 STIRN---QICDKIAPITFTLQQLLSRGSVIMT---------KSGNIIWSS-NGFHRPWN 636
Query: 391 KHR 393
HR
Sbjct: 637 IHR 639
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIP 56
D + + G RL SGP PG +DF+F +Y+K I A G + P
Sbjct: 93 DGLASGDGLYGKVRLRALSGPVRPGSYDFSFYNYFKRIGAHGIYLGKP 140
>gi|319404353|emb|CBI77953.1| Competence protein [Bartonella rochalimae ATCC BAA-1498]
Length = 754
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 95/189 (50%), Gaps = 15/189 (7%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
GSAS I+ HF + + G+I+N LA+PI+S ++P GL++ M L+ P +M +
Sbjct: 483 GSASG-IYAAYHFSNVALLGVISNALALPIVSIFIMPFGLLSAFSMFFGLEWWPLQIMGF 541
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR--HIGSIMIGITI 209
G +++I IA+ I G IP ++ + + + + + F KT IR + I+ GI +
Sbjct: 542 GTNLMIKIAYAIQAISPVLNPGFIPLSALILLSIGLVGLTFLKTAIRLFFVFFILAGILV 601
Query: 210 IILFTFPYSFSP-DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSAL-----ITPF 263
++ SP L+I++ +V +++ L + +P F S W+ + I P
Sbjct: 602 CMM------QSPVQLIIADDMKIVGVLNDKILYVDRYHPSKFTISLWEKSFRINKTIKPT 655
Query: 264 HEAPHVQKE 272
P ++ +
Sbjct: 656 KIGPSLKGQ 664
Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
D + G +L SG PG +DF+F +Y+K I A G++ PK I
Sbjct: 205 DGLTPGDGLYGKVKLRALSGAIRPGSYDFSFHNYFKRIGAQGFYLGKPKKI 255
>gi|114764300|ref|ZP_01443528.1| competence protein [Pelagibaca bermudensis HTCC2601]
gi|114543248|gb|EAU46265.1| competence protein [Roseovarius sp. HTCC2601]
Length = 678
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 15/183 (8%)
Query: 101 IKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIA 160
+ HF+ + YGL+AN++A+P++ +V+P ++ LLM L L+ VMA GLD I+ +A
Sbjct: 418 MAHFNIVSHYGLVANLVAVPVMGLIVVPMAVVTALLMPLGLEATALWVMALGLDWILTVA 477
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
++ R P + ++ L++ + R G + + + + + +
Sbjct: 478 GTVTGWDGALGQVRAPGAWVLPLLASGGLILCLWQGRGRWAGLLPLSLAVTL---WASGG 534
Query: 220 SPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW-----------KSALITPFHEAPH 268
P LLIS+ G LV + + F+ + W +A + P HE P
Sbjct: 535 RPALLISDSGTLVGAMTPEGRALSRERGAGFVAAVWLENDGQAGGQAVAAALWPEHEQPR 594
Query: 269 VQK 271
V +
Sbjct: 595 VAR 597
>gi|299134984|ref|ZP_07028175.1| ComEC/Rec2-related protein [Afipia sp. 1NLS2]
gi|298589961|gb|EFI50165.1| ComEC/Rec2-related protein [Afipia sp. 1NLS2]
Length = 757
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 89/164 (54%), Gaps = 9/164 (5%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HFH I YG+IAN++A+P++S +V+PAGL+ I+ + D++ + +M G+D +I ++
Sbjct: 465 HFHRIAPYGVIANLVAMPVVSVLVMPAGLLGIVAIPFGFDSLFWHLMGVGIDWMIFVSQW 524
Query: 163 ISVAHNEFCIGRIPETSFVTIVV---EFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
++ F GR+ S ++V +++ ++ +R G +IG ++
Sbjct: 525 VAALPGAF--GRVHAFSIGPLIVMSGGIVVLGLLRSPLRWAGVGLIGCGVVWAAVVT--- 579
Query: 220 SPDLLISEKGNLVALVDKNTLIS-NYSNPPSFIFSQWKSALITP 262
PD+LI+ + VA+ K++ + ++ F++ +W +A P
Sbjct: 580 EPDILIARDASSVAVRGKDSRLRIMHTAKNVFVWREWLAADADP 623
>gi|259418796|ref|ZP_05742713.1| competence protein [Silicibacter sp. TrichCH4B]
gi|259345018|gb|EEW56872.1| competence protein [Silicibacter sp. TrichCH4B]
Length = 673
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 123/277 (44%), Gaps = 47/277 (16%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F HF+ + YGLIAN+ A+P++ VV+P ++AI L + F +M+ G+ I+
Sbjct: 413 FGAAHFNMVSHYGLIANLAAVPVMGAVVVPGAVLAICLAPFGGSAVGFWIMSQGISWILT 472
Query: 159 IAHRISVAHNEFCIGRI--PETSFV-TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+A +VA G++ PE + +V+ LL++ + +R +G IG+ LF +
Sbjct: 473 VAD--TVAGWPGARGQVVAPEPWMLPVLVMGALLLLLWQGQLRWVGLAPIGVA---LFFW 527
Query: 216 PYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW------KSALITPFHEAPHV 269
P S P++LIS G LV ++ + SF+ W + + F P
Sbjct: 528 PSSPRPEVLISADGGLVGVMTSEGRALSRPRGKSFVAGIWLENDGDGADQVEAFDRVPAR 587
Query: 270 QKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDM--IRLSCQL 327
Q+ +Q F +++ F V VL + + ++SC
Sbjct: 588 QQGKVQ-----------------TFQAVERHF----------VHVLGKTGLSEWQMSCAP 620
Query: 328 SDILITTIR-DINTKLCNVSLLITPEILQKQGSLEIT 363
++++ +I + C L +TP+ L+ GS+ T
Sbjct: 621 HEVIVLSIEAEAPDGEC---LWLTPKALRDTGSIAYT 654
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 8 YDPFPAE--TTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
+D P E + + A LSPP GPA PG FDF +++ G+ A+GY
Sbjct: 143 FDGAPPEPGSWVMTTAHLSPPQGPAEPGGFDFRRHAWFLGLGAVGY 188
>gi|328543727|ref|YP_004303836.1| ComEC/Rec2-related protein [polymorphum gilvum SL003B-26A1]
gi|326413471|gb|ADZ70534.1| ComEC/Rec2-related protein [Polymorphum gilvum SL003B-26A1]
Length = 763
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 123/281 (43%), Gaps = 8/281 (2%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
I + HF YGLI N+LA+P++SFVV+PAG++A+ L+ + P +M G++ +
Sbjct: 471 GIVGVYHFERASPYGLIGNLLAMPVVSFVVMPAGVLALALLPFGVAAGPLWIMGRGIEAM 530
Query: 157 IHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+ A ++ NE +G +P ++ ++ MV +R +G+ + +
Sbjct: 531 LAAARWTQALTPNEGVVGSLPASAACLLIGGLFAMVLAAGRMRLAALAPLGLGLALALAH 590
Query: 216 PYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQ 275
+ D+ I ++G +A D + + + P F W A P + + Q
Sbjct: 591 RPA---DVHIPDRGVGLAARDGSGTLRVSARRPGFASEGWLRAEAVAPSAFPSRRMTEEQ 647
Query: 276 EKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTI 335
++ ++ +L + P +S G + + + +++ + + C +D++IT +
Sbjct: 648 QRCDAAGCVVL-AHAPSAPGSDAES-ARGPRTAPLTIALVRDRRALPTDCVRADVVITQL 705
Query: 336 RDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKF 376
+ + C L++ G+L + ++ V+
Sbjct: 706 Q--APEGCGGQLVVDAVTRATTGALALWLVAEEGRTRIVRL 744
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGY-FYSIPKMIYSSESHNT 67
D A + ARL PPSGP PG +DF F ++Y+GI A G+ F ++ +
Sbjct: 188 DGLAAGDAVALRARLFPPSGPVRPGGYDFAFRAFYQGIGATGFAFGAVQPVDLGPRPAAL 247
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFH---------CIPVYGLIANILA 118
++++ ++ IR +G + + ++ L+ + GL A++LA
Sbjct: 248 EIRRQVALVRDGLGERIRRQLGDGDAGAIAVALLVGLRGGISAEAQDSLRQAGL-AHVLA 306
Query: 119 IPILSFVVIPAGLIAILLMILSL 141
I L + G+ A +L +L++
Sbjct: 307 ISGLHMALFSGGVYAAVLAVLAV 329
>gi|326402243|ref|YP_004282324.1| hypothetical protein ACMV_00950 [Acidiphilium multivorum AIU301]
gi|325049104|dbj|BAJ79442.1| hypothetical protein ACMV_00950 [Acidiphilium multivorum AIU301]
Length = 697
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 83/162 (51%), Gaps = 9/162 (5%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F F + Y ++AN++A+P+ + VV+PAG++A++LM L L+ + M WG+ ++
Sbjct: 429 FAAYQFQQVQPYYILANLIAVPLTALVVLPAGMVALVLMPLHLEALALAPMGWGIAAMLA 488
Query: 159 IAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIG--SIMIGITIIILFTF 215
+A + + H IG P + + L+ + +R G ++IG+ ++L
Sbjct: 489 VARFVGQLPHALIVIGPSPGWPVALLGLGMALLGLLRGRVRLAGLAPVVIGLAGMML--- 545
Query: 216 PYSFSPDLLISEKGNLVALVDKNTL-ISNYSNPPSFIFSQWK 256
+PD+L+S +LVA+ D + I P + +QW+
Sbjct: 546 --GRAPDVLVSPTASLVAVRDGAVVRILETRRPDQYTLAQWR 585
>gi|209885103|ref|YP_002288959.1| competence protein [Oligotropha carboxidovorans OM5]
gi|209873299|gb|ACI93095.1| competence protein [Oligotropha carboxidovorans OM5]
Length = 709
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 88/162 (54%), Gaps = 13/162 (8%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HFH I YG+IAN++A+P++S +V+PAGL+ I+ + LD++ + +M G+D +I ++
Sbjct: 419 HFHRIAPYGVIANLVAMPVVSVLVMPAGLLGIVAIPFGLDSLFWQLMDVGIDWMIAVSQW 478
Query: 163 ISVAHNEFCIGRIPE---TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
+ F GR+ S + I +++ +T +R G+ +IG I++ +
Sbjct: 479 VVALPGAF--GRVHAFGVGSLLVISAGIIVLGLLRTPLRWAGAALIGGGILLA---AQAT 533
Query: 220 SPDLLISEKGNLVALVDKNT---LISNYSNPPSFIFSQWKSA 258
PD+LI+ VA+ ++ ++ N +F+ +W +A
Sbjct: 534 PPDVLIARDAASVAVRGRDGQLRIMPTAKN--AFVAREWLAA 573
>gi|110680398|ref|YP_683405.1| competence protein, putative [Roseobacter denitrificans OCh 114]
gi|109456514|gb|ABG32719.1| competence protein, putative [Roseobacter denitrificans OCh 114]
Length = 703
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 5/168 (2%)
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
G G A+A + HF+ I YGLIAN+L++P++ VV+PA ++A+ L L LD + +
Sbjct: 427 GISGLATAPVG-AAHFNTISHYGLIANLLSVPVMGSVVVPAAVLALCLAPLGLDWLGLWI 485
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV-TIVVEFLLMVFCKTNIRHIGSIMIGI 207
M GL I+ + ++ P + + I + FL +V + R IG + +
Sbjct: 486 MGVGLRWILEVGSFVAGLDGARSYVAGPGAAVLPMIALGFLWLVLWQGRARLIGVVPV-- 543
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
++ + + + P LI+E G LV L+ ++ + + FI W
Sbjct: 544 -LLAFWLWQGTVRPIGLIAENGTLVGLMTEDGRALSKAKGAGFIARNW 590
>gi|148259092|ref|YP_001233219.1| ComEC/Rec2-related protein [Acidiphilium cryptum JF-5]
gi|146400773|gb|ABQ29300.1| ComEC/Rec2-related protein [Acidiphilium cryptum JF-5]
Length = 697
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 83/162 (51%), Gaps = 9/162 (5%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F F + Y ++AN++A+P+ + VV+PAG++A++LM L L+ + M WG+ ++
Sbjct: 429 FAAYQFQQVQPYYILANLIAVPLTALVVLPAGMVALVLMPLHLEVLALAPMGWGIAAMLA 488
Query: 159 IAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIG--SIMIGITIIILFTF 215
+A + + H IG P + + L+ + +R G ++IG+ ++L
Sbjct: 489 VARFVGQLPHALIVIGPSPGWPVALLGLGMALLGLLRGRVRLAGLAPVVIGLAGMML--- 545
Query: 216 PYSFSPDLLISEKGNLVALVDKNTL-ISNYSNPPSFIFSQWK 256
+PD+L+S +LVA+ D + I P + +QW+
Sbjct: 546 --GRAPDVLVSPTASLVAVRDGAVVRILETRRPDQYTLAQWR 585
>gi|154253618|ref|YP_001414442.1| ComEC/Rec2-like protein [Parvibaculum lavamentivorans DS-1]
gi|154157568|gb|ABS64785.1| ComEC/Rec2-related protein [Parvibaculum lavamentivorans DS-1]
Length = 718
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 139/348 (39%), Gaps = 48/348 (13%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTY--GSASASIFLIK--------HFHCIPV 109
Y S +WT S + + L + A G+Y G A SI HF+ I +
Sbjct: 402 YESSWMRSWT----SRPRATGLGALPALAGSYVLGIALTSIVAGAATGAIAAYHFNRIAL 457
Query: 110 YGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN- 168
YGL N+ A+P++ VV+P L+++LLM LD M G++ ++ +AH ++ +
Sbjct: 458 YGLAGNMAAMPLVGIVVMPMALLSLLLMPFGLDGPALWAMGKGVEGMLLVAHEVASWNGA 517
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEK 228
+ + P + + +V+ L + + R G + + + L + + PD+LI
Sbjct: 518 DRLVPEAPLGALLLVVLGSLWLALWREKWRFAGIVPM---VAGLALWGAASRPDVLIDRD 574
Query: 229 GNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRS 288
L A+ N ++ S+ P++ QW H+ D + ++S E
Sbjct: 575 AALFAVRTANGSLALTSSRPAYAAEQWLR------HDG------DGRRPREASKSEA--- 619
Query: 289 MQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL---CNV 345
L + C+ ++ D + C +DI+I I + ++ C+
Sbjct: 620 ------LACDRHGCIYKEEGRPVIAFAGTLDAVVEDCAKADIVIAKI-SVPYRIRRECDA 672
Query: 346 SLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
LL+ + G+ +T + + S + PW + R
Sbjct: 673 RLLLDYFSFWRNGATALTFTESGGID-----VTTSLAARGNRPWVQRR 715
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
ARL PP P PG FD+ +++ G+ A+G+ Y++P+ + + ++ ++
Sbjct: 183 ARLMPPPEPVQPGGFDYARQAWFDGMGAVGFAYTLPEELSPPSGRDR---AVLADLRMRI 239
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIP 108
IR+ +G A A+ + IP
Sbjct: 240 GERIRSVVGGTSGAVAAALINGERASIP 267
>gi|296537259|ref|ZP_06899153.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296262414|gb|EFH09145.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 224
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
+ + HF + +YGL AN++A+P+ SF+V+PAGL A+L L L+ P +M WG++ ++
Sbjct: 34 YGLHHFGRLQLYGLAANMVAVPLTSFLVMPAGLAAMLAWPLGLEQWPLWLMGWGVEGVLW 93
Query: 159 IAHRISVAHNEFCIGR-IPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+A ++ R +P + + L + + R G +I LF+
Sbjct: 94 VARSVAAWPGAALPARPMPGWGLGLLSLGLLWLCLWRQGWRWWGVPLIAAG---LFSALA 150
Query: 218 SFSPDLLISEKGNLVAL-VDKNTLISNYSNPPSFIFSQW 255
PD+L+S L+A + + +F+ W
Sbjct: 151 VRPPDILVSADARLIAFRTEAGVALQRLPGGTAFLRDNW 189
>gi|118589994|ref|ZP_01547398.1| ComEC/Rec2-related protein [Stappia aggregata IAM 12614]
gi|118437491|gb|EAV44128.1| ComEC/Rec2-related protein [Stappia aggregata IAM 12614]
Length = 751
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 124/271 (45%), Gaps = 32/271 (11%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH- 161
HF I YG++ N+L +P+ S +V+P G++A +LM L +P VM++G+ +++ +A
Sbjct: 431 HFSRIAPYGVVGNLLGMPVFSLLVMPMGVLAFVLMPFGLAALPLAVMSFGVSLLLKVASF 490
Query: 162 RISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
++ GR+ + ++ + R + + ++I+FT P
Sbjct: 491 TAALDAGGGASGRLDGAAASLLLSALFAGLLLPGRKRLLAGFPLLAGLLIVFT---DRPP 547
Query: 222 DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSS 281
D+ I+ G+ +A D+ + + SF W +Q E + + +
Sbjct: 548 DIQIAASGSRIAARDETGSLRWAARGRSFATDLW-------------LQSEGV--PDDAI 592
Query: 282 LKEILRSMQPR--KFLCIKKSFCVGCHRSD--------VIVGVLKRKDMIRLSCQLSDIL 331
L ++S Q + C+ +++ +G SD + + K + ++ C+ +D++
Sbjct: 593 LSRKMKSPQRKCDDDGCVVRAYRIG-EGSDSQQQSLPYLAIAQPKTFEAFQMDCRYADLI 651
Query: 332 ITTIRDINTKLCNVSLLITPEILQKQGSLEI 362
+T + I +++C+ L++ E +G++ I
Sbjct: 652 VTDL--IASEICSSRLVLDQETRSARGAVSI 680
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 15/147 (10%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK-KIS 74
T++ ARL PP+GP FPG +D++F ++Y+ I A G+ + P +I +S + ++
Sbjct: 150 TVQASARLFPPAGPVFPGGYDYSFRAFYQQIGATGFSFGSPTVIKVPDSELGFRPAVAVA 209
Query: 75 SIKQSFLNEIRANIGTYGSASASIFLI----------KHFHCIPVYGLIANILAIPILSF 124
++ + I+A++ G +A I + + + GL A+ILAI L
Sbjct: 210 KLRSNIAERIKASLAD-GPETALIVALLVGDRSGIAEQQEEVLRSAGL-AHILAISGLHM 267
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAW 151
+ G +L+ILSL +P + W
Sbjct: 268 ALFAGGAYGAVLLILSL--VPVLTLRW 292
>gi|110633996|ref|YP_674204.1| ComEC/Rec2-related protein [Mesorhizobium sp. BNC1]
gi|110284980|gb|ABG63039.1| ComEC/Rec2-related protein [Chelativorans sp. BNC1]
Length = 788
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 124/305 (40%), Gaps = 27/305 (8%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G+ASA +F + HF + L AN+ A P +S + +PA ++AIL M LD I F M
Sbjct: 485 GTASA-LFGVWHFQRVTPLALPANLAAAPFVSIIAMPAAVVAILAMPFGLDGIFFKAMGE 543
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
+ +I IA S +G IP ++F + +++V T +R I + + +
Sbjct: 544 AITAVIVIAKWFSDRSPVDAVGMIPLSAFFALTAALVILVVSTTRLRLIAVPLCVLGFAL 603
Query: 212 LFTFPYSFSPDLLISEKGNLVALVDKNTLIS-NYSNPPSFIFSQWKSALITPFHEAPHVQ 270
L T PD+LISE LV + ++ +++ N P +F W AL T P V
Sbjct: 604 LVTRQL---PDVLISEDARLVGVRGEHGILAVNRPRPNAFTTDDWMRALDTGTTLKP-VS 659
Query: 271 KEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDI 330
D + F C C+ H S +V + + C LS
Sbjct: 660 AADW--------------VSGLAFSC-ADGLCMARHVSGALVAHAETESAAETVC-LSAS 703
Query: 331 LITTIRDINTKLCNVS--LLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFP 388
LI C S +++T L + GS I + ++ I AI P
Sbjct: 704 LIVIDDAAAQNPCGPSEAVVLTKRDLARSGSASIHF---DREGMALRPEITFAIGEPWRP 760
Query: 389 WTKHR 393
W HR
Sbjct: 761 WHAHR 765
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 17 IEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT--WKKIS 74
+EG+ARL PPSGP PG +DF+F SY+ G A+G+F + P+ I + +T I
Sbjct: 214 VEGLARLMPPSGPVRPGSYDFSFVSYFTGTGALGFFMTGPERIEADRQVSTLAKIAHSIE 273
Query: 75 SIKQSFLNEIRANIG 89
++ + IR ++G
Sbjct: 274 GVRLALAERIRTHVG 288
>gi|114569947|ref|YP_756627.1| ComEC/Rec2-like protein [Maricaulis maris MCS10]
gi|114340409|gb|ABI65689.1| ComEC/Rec2-related protein [Maricaulis maris MCS10]
Length = 702
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIA-HRISV 165
I +GL N+L +PI S +V+PAG++ ++L+ + LD IPF M GL +++ +A H +
Sbjct: 448 IATFGLAGNLLVMPIFSLLVMPAGVLGLVLIPIGLDAIPFAAMEAGLSLMLDLAGHVANW 507
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
+ + + F+L++ + +R G +++ + + P PDL I
Sbjct: 508 PGAQRTVAAASGGVLAAFSIGFVLLILMRGPMRGAGGLVMAAALAVWTLMP---QPDLFI 564
Query: 226 SEKGNLVA 233
SE G ++A
Sbjct: 565 SENGLVLA 572
>gi|260433607|ref|ZP_05787578.1| competence protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260417435|gb|EEX10694.1| competence protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 678
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 6/155 (3%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HF+ + YGL+AN+L +PI+ +V+PA + A LL + L+ + VM +GL I+ ++
Sbjct: 417 HFNMVSHYGLVANVLTVPIMGMLVVPAAVFAALLAPIGLEALAIHVMGFGLRWILFVSDW 476
Query: 163 ISVAHNEFCIGRIPETSFV--TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+S P + FV T + + V + IR G++ + ++ L +
Sbjct: 477 VSGLDGARGFVADP-SDFVLPTFALGAVFAVLWQGRIRWFGAV---VALVALILWGQGDR 532
Query: 221 PDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
P++LI++ G LV ++ ++ + FI S W
Sbjct: 533 PEVLIADTGALVGVMTEHGRALSKKKGAGFIASVW 567
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P P + + A LSPP GP PG FDF ++++ + A+GY +P ++ S S++
Sbjct: 150 PEPGQRIMT-TAHLSPPQGPVEPGGFDFRRHAWFQRLGAVGY-TRVPVLMASPPSNSG-- 205
Query: 70 WKKISSIKQSFLNEIR----ANIGTYGSA 94
+I++++ + + +R ++G + +A
Sbjct: 206 -VRIAALRMAISDRVREILPGDVGGFAAA 233
>gi|218512643|ref|ZP_03509483.1| hypothetical protein Retl8_02596 [Rhizobium etli 8C-3]
Length = 258
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 4 ITKKYD-PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI--- 59
I + D PF I G ARL+PP+GPA PGL DF+F +Y+ GI A G+FY P+ +
Sbjct: 23 IARGADMPFEIGDIITGRARLTPPAGPALPGLNDFSFGAYFDGIGANGFFYRAPEKVDLQ 82
Query: 60 -------YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
+S++ W ++ S I + + + G + +A
Sbjct: 83 AGPPAVTSTSDALLEWLYRLRSGIGDRIRSMLPGDTGAFAAA 124
>gi|295689579|ref|YP_003593272.1| comEc/Rec2-like protein [Caulobacter segnis ATCC 21756]
gi|295431482|gb|ADG10654.1| ComEC/Rec2-related protein [Caulobacter segnis ATCC 21756]
Length = 722
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 9/160 (5%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F ++HF+ + V+GL AN+ P+ SFV++P I LL L V WG+D ++
Sbjct: 448 FAMQHFNRVAVWGLPANLAVAPLSSFVIMPFLAIGTLLEPFGLGGPFLAVAGWGVDAMVD 507
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFC--KTNIRHIGSIMIGITIIILFTF 215
+A+ + AH I + +V+ FL LM+ C K +R IG+ M + + +
Sbjct: 508 VANGFADAHGAQRI--VASAPPQVLVIAFLGLMILCLWKGRLRWIGAPM----ALAVALW 561
Query: 216 PYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
P PD I+ G A+ + + ++ F W
Sbjct: 562 PRPVPPDAWIAADGATAAVRSGDAAVLLRTDAKRFGAELW 601
>gi|192291622|ref|YP_001992227.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris TIE-1]
gi|192285371|gb|ACF01752.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris TIE-1]
Length = 755
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HFH I YG+++N+ A+P++S +V+PAGL+ + M LD + +M G+D +I +A
Sbjct: 461 HFHRITPYGVLSNLAAMPVVSAIVMPAGLLGLAAMPFGLDAPFWRIMELGIDWMILVAQ- 519
Query: 163 ISVAHNEFCIGRIPETSFVT-----IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
VA +GR+ T+F T + +++ ++ +R G++ +G+ + P
Sbjct: 520 -WVAALPGAVGRV--TAFGTGPLLVASLGIVMLGLLRSPLRWGGALGVGVAVAWAALTP- 575
Query: 218 SFSPDLLISEKGNLVALVDKNTLIS-NYSNPPSFIFSQWKSA 258
P++LI+ G VA+ + + S +F +W +A
Sbjct: 576 --QPEVLIAGDGRQVAVRGADGRLHLMQSGADAFRLKEWLAA 615
>gi|91977310|ref|YP_569969.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris BisB5]
gi|91683766|gb|ABE40068.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris BisB5]
Length = 764
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 130/293 (44%), Gaps = 38/293 (12%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HFH + YG+I+N+LA+P++S +V+PAGL+ + M LD + + +M G+D ++ +A
Sbjct: 470 HFHRVTPYGVISNLLAMPVVSVMVMPAGLLGLAAMPFGLDGVFWRIMEVGIDWMMIVA-- 527
Query: 163 ISVAHNEFCIGRIPETSFVTIVVE---FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
+ VA IG+I +++ +L+ +T +R+ G I++ + P
Sbjct: 528 LWVATLPGAIGKIAAFGSGPLLLASLGIILLGLLRTPLRYGGLIIMMVATGWALLTP--- 584
Query: 220 SPDLLISEKGNLVALVDKNTLIS-NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKN 278
PD+LI+ G VAL + + S F +W +A + +
Sbjct: 585 QPDILIAGDGRQVALRGADGRLRVMQSGADHFKLKEWLAADAD------------PRAAD 632
Query: 279 QSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDI 338
+SL+E + CV +V + R D + C + ++I +
Sbjct: 633 AASLRE---------GVSCDADGCVAALADGALVALSFRADGVADDCARATLVIALAQPP 683
Query: 339 NTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAI-ENLHFPWT 390
C + LI+ E+L+ G+L + N F+I++A + L PW+
Sbjct: 684 PD--C-AARLISAELLKDSGALALW----RNRGGDGGFVIEAARPKRLDRPWS 729
Score = 39.7 bits (91), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK-KISSIKQS 79
ARL PP P PG +DF Y++GI+A G+ I + + W+ + ++I Q
Sbjct: 198 ARLQPPLSPLRPGSYDFGRDLYFQGIAASGFALG---AITALDPPGDGGWRLRYTAIMQG 254
Query: 80 FLNEIRANI 88
+ I A I
Sbjct: 255 LRDAIDARI 263
>gi|83953841|ref|ZP_00962562.1| competence protein [Sulfitobacter sp. NAS-14.1]
gi|83841786|gb|EAP80955.1| competence protein [Sulfitobacter sp. NAS-14.1]
Length = 682
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 126/297 (42%), Gaps = 43/297 (14%)
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
HF+ I YGLIAN+L++P++ +V+PA + A+++ L L+ IP VM GL I+ +A
Sbjct: 421 AHFNTIAQYGLIANLLSVPLMGVLVMPAAVAALVMAPLGLEWIPLQVMGAGLRWILLVAQ 480
Query: 162 RISVAHNEFCIGRIPETS---FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
VA + G + + + FL ++ + +R G +G I + +
Sbjct: 481 --GVAEIDGAQGHVAAPGPWVLPLLALGFLWVLLWQGWLRFAG---LGAVIAAGVLWHGA 535
Query: 219 FSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKN 278
P +LIS+ G+LV ++ + + F+ W D +++
Sbjct: 536 ERPTVLISDTGSLVGVMTPTGRALSKAKGAGFVALNWLE------------NDGDGADQD 583
Query: 279 QSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDI 338
+++ + +R P+ + ++ + R+ G + +I LS L
Sbjct: 584 RAAARWPIR---PK--IGGREVIHLSGKRARAAFGACRADQIIALSVVPDPPL------- 631
Query: 339 NTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFII--KSAIENLHFPWTKHR 393
T C+V P+ L+ G++ +++ DN +V + A L W K R
Sbjct: 632 -TGGCDV---FDPDRLRSTGAVALSL-----DNGRVTMQTARQKAGARLWTAWPKDR 679
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 23 LSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
LSPPSGP P FDF +++ G+ A+GY
Sbjct: 165 LSPPSGPVEPEGFDFQRHAWFAGLGAVGY 193
>gi|83592937|ref|YP_426689.1| ComEC/Rec2-like protein [Rhodospirillum rubrum ATCC 11170]
gi|83575851|gb|ABC22402.1| ComEC/Rec2-related protein [Rhodospirillum rubrum ATCC 11170]
Length = 739
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 6/134 (4%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HFH + +YG++AN++A+P+ F V+P L+ + LM L+ + + WGLD I+ +A
Sbjct: 459 HFHRVALYGVVANMIAVPLTGFWVMPWCLVLLALMPFGLEGLAMAPLGWGLDGIVAVARW 518
Query: 163 ISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY-SFS 220
+ I P + + + L + R G + I++ T P+ +
Sbjct: 519 VGGWPGALLAIPDGPGWALGLVSLGGLWLCLWTRPWRLAGV----VPILVGMTVPWLTPP 574
Query: 221 PDLLISEKGNLVAL 234
PD+LI+++G L+A+
Sbjct: 575 PDVLINDEGTLIAV 588
>gi|56697020|ref|YP_167382.1| competence protein [Ruegeria pomeroyi DSS-3]
gi|56678757|gb|AAV95423.1| competence protein [Ruegeria pomeroyi DSS-3]
Length = 676
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 16/217 (7%)
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
HF+ + YGL+AN++++P++ VVIPA ++A++L L LD I VM GL I+ +A
Sbjct: 418 AHFNTLAHYGLVANLMSVPLMGLVVIPAAVLALVLAPLGLDWIGLEVMGLGLRWILGVAD 477
Query: 162 RISVAHNEFCIGRIPETSFVT---IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
VA + G + +V + + L +V + R G + + + + +
Sbjct: 478 --WVAGMDGARGYVMRPDWVVLPILTLGALWLVLWRGRARLAG---VPVMAAAFWLWSGA 532
Query: 219 FSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW---KSALITPFHEAPHVQKEDLQ 275
P +LI++ G LV ++ + + FI W A ED+
Sbjct: 533 ERPGVLIADTGGLVGVMTETGRALSKPRGAGFIAGVWLENDGDGADQMAAAARWPGEDML 592
Query: 276 EKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIV 312
K + EI+ R + C R+ +IV
Sbjct: 593 RKIRVGEVEIVHVTGKRAAQGLSD-----CDRAQLIV 624
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
A LSPP GP PG FDF ++++G+ AIGY
Sbjct: 160 AYLSPPQGPVEPGGFDFRRHAWFQGLGAIGY 190
>gi|162145890|ref|YP_001600348.1| DNA uptake protein [Gluconacetobacter diazotrophicus PAl 5]
gi|161784464|emb|CAP53994.1| putative DNA uptake protein [Gluconacetobacter diazotrophicus PAl
5]
Length = 707
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 5/175 (2%)
Query: 100 LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI 159
++ HF + + ++AN+LA+P+++ ++P G+IA+LLM D + M WG+ +++ +
Sbjct: 435 VMTHFGTLQPWFVLANLLAVPLMALWILPWGVIALLLMPWGADPVALVPMGWGIRLVLGL 494
Query: 160 AHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
AH +S + +P ++ + R G + + +
Sbjct: 495 AHAVSGWPAARVMVPAMPSWGLAAWMLGLCWLCLWTRRWRWWGVAPMALALAAPVLV--- 551
Query: 219 FSPDLLISEKGNLVALVDKNTL-ISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
PD+L+S G VA+ D L I + + S W+ AL P P
Sbjct: 552 ARPDVLLSPDGRAVAVRDGAVLRIGPHPGADKAVESDWQQALALPLASLPQADGR 606
>gi|89054334|ref|YP_509785.1| ComEC/Rec2-related protein [Jannaschia sp. CCS1]
gi|88863883|gb|ABD54760.1| ComEC/Rec2-related protein [Jannaschia sp. CCS1]
Length = 706
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 109/279 (39%), Gaps = 30/279 (10%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HF+ + VYGLIAN+L +P + VVIP ++A++L L + F +M L+ I+ +A R
Sbjct: 417 HFNRLAVYGLIANLLTVPAMGSVVIPFAVLALMLAPFGLSWVAFWIMELALEWILAVAAR 476
Query: 163 IS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
++ + + P I V + + R I + +I+ + ++ P
Sbjct: 477 VADIPGAVRMVASPPHLVLPLIGVGGIALCIWSGRGRWIALTPMAAGLIL---WQWAERP 533
Query: 222 DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW---KSALITPFHEAPHVQKEDLQEKN 278
LLISE G LV L + F+ W LIT A D
Sbjct: 534 MLLISEPGGLVGLTTDQGRALSRPRGDGFVAGIWLENDGDLITQEDAAARPAWADADPGR 593
Query: 279 QSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDI 338
+ L E+ ++ + C R D++V L +D S L RD
Sbjct: 594 TTQLGEV--TLWHGTGRAASRVVDAACARHDIVVTNLAPEDP-------SATLTQAERDT 644
Query: 339 NTKLCNVS--------------LLITPEILQKQGSLEIT 363
+L LL+TP +L GS+ ++
Sbjct: 645 RARLTAPPPATGAANAATATPCLLLTPRVLSATGSIALS 683
>gi|209543802|ref|YP_002276031.1| ComEC/Rec2-like protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209531479|gb|ACI51416.1| ComEC/Rec2-related protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 695
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 5/175 (2%)
Query: 100 LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI 159
++ HF + + ++AN+LA+P+++ ++P G+IA+LLM D + M WG+ +++ +
Sbjct: 423 VMTHFGTLQPWFVLANLLAVPLMALWILPWGVIALLLMPWGADPVALVPMGWGIRLVLGL 482
Query: 160 AHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
AH +S + +P ++ + R G + + +
Sbjct: 483 AHAVSGWPAARVMVPAMPSWGLAAWMLGLCWLCLWTRRWRWWGVAPMALALAAPVLV--- 539
Query: 219 FSPDLLISEKGNLVALVDKNTL-ISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
PD+L+S G VA+ D L I + + S W+ AL P P
Sbjct: 540 ARPDVLLSPDGRAVAVRDGAVLRIGPHPGADKAVESDWQQALALPLASLPQADGR 594
>gi|288958448|ref|YP_003448789.1| ComEC/Rec2-related protein [Azospirillum sp. B510]
gi|288910756|dbj|BAI72245.1| ComEC/Rec2-related protein [Azospirillum sp. B510]
Length = 717
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 120/298 (40%), Gaps = 32/298 (10%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F + HF I YG+++N++AIPI SF V+P LIA L+ + M WG +I
Sbjct: 449 FSLFHFQQIAFYGVLSNLIAIPITSFWVMPWSLIAYALLPFGWEEPALIAMNWGDRAVIW 508
Query: 159 IAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIG--SIMIGITIIILFTF 215
A + + +P F +V+ + + R +G I+ G+ +L
Sbjct: 509 TAEFFGRLPWASLTVPAMPAGGFTALVLGGIWLCVWTRRWRWLGMLPILAGLAAPML--- 565
Query: 216 PYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQ 275
+ PD+L++ G ++A+ + +S + W+ + +
Sbjct: 566 --AERPDVLVAGDGTVMAVRMPDGRLSASVKGGGRVTETWRE------RDGERTAADPWP 617
Query: 276 EKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTI 335
+ S E RS+ C+ + RS + + + D + C +D ++TT
Sbjct: 618 AAGEWSDGE--RSLGCDGLGCLYRVR----GRS---MALSRLPDALDEDCGAADAVVTT- 667
Query: 336 RDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
+ C L+I L+ +G+ +T+ + D KV+ + + PWT R
Sbjct: 668 --AVARGCRADLVIDRWALRHEGAHALTV---TADGIKVETVRGVRGDR---PWTGGR 717
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ ++ +Y P + + A L PP PA PG FDF +++ G+ A G+ P+ I +
Sbjct: 165 IRLSDRYPAPPPGSVVRVRATLLPPQAPAEPGAFDFQRRAWFMGLGATGFATGGPEQIEA 224
>gi|16126147|ref|NP_420711.1| ComEC/Rec2 family protein [Caulobacter crescentus CB15]
gi|221234918|ref|YP_002517354.1| DNA translocation competence protein ComA [Caulobacter crescentus
NA1000]
gi|13423355|gb|AAK23879.1| ComEC/Rec2 family protein [Caulobacter crescentus CB15]
gi|220964090|gb|ACL95446.1| DNA translocation competence protein ComA [Caulobacter crescentus
NA1000]
Length = 725
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F ++HF+ + V+GL AN+ P+ SFV++P I +L L V WG+D++++
Sbjct: 448 FAMQHFNRVAVWGLPANLAVSPLSSFVIMPFLAIGTVLEPFGLSAPFLAVAGWGIDVMLN 507
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFC--KTNIRHIGSIMIGITIIILFTF 215
+A S AH I + ++V FL LMV C + +R IG+ + + + +
Sbjct: 508 VAGLFSEAHGAQHI--VASAPPQVLLVAFLGLMVLCLWRGRLRWIGAPL----ALAVALW 561
Query: 216 PYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
P PD I+ G A+ N + ++ F W
Sbjct: 562 PRPTPPDAWIAADGATAAVRSGNAAVLLRTDAKRFGAELW 601
>gi|126737890|ref|ZP_01753620.1| competence protein [Roseobacter sp. SK209-2-6]
gi|126721283|gb|EBA17987.1| competence protein [Roseobacter sp. SK209-2-6]
Length = 671
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 121/275 (44%), Gaps = 29/275 (10%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G+A+A F HF+ + YGL+AN+LA+P++ VVIPA ++A+ L+ L L+ I +
Sbjct: 404 GAATAP-FGAAHFNLLSHYGLLANLLAVPVMGIVVIPATVLALCLLPLGLEWIALRFVEM 462
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF--LLMVFCKTNIRHIGSIMIGITI 209
GL I+ + ++ N + +V V+ F L + + R +G I +G+ +
Sbjct: 463 GLSWILAVGEFVATLPNSQSSVQA-ANPYVLPVMSFGALFVFLWRGKARWLGGIPVGVAL 521
Query: 210 IILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHV 269
++ + P LLIS G LV ++ + + S SF S W L +A
Sbjct: 522 VV---WAIDQRPLLLISPTGGLVGVLQEEGRSLSRSETQSFAASNW---LRRDGDDATQF 575
Query: 270 QKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSD 329
Q + K ++L I+R + +++ KR +C D
Sbjct: 576 QAAQ-RAKGPAALPGIVR---------------FNLQKGEIVHFQGKRATKEVQTCNAGD 619
Query: 330 ILITTIRDINTKLCNVSLLITPEILQKQGSLEITI 364
I ++ + C V TP+ L GS+++ +
Sbjct: 620 IFVSNTALKASGGCRV---FTPDELSLHGSVQMGV 651
>gi|254796699|ref|YP_003081535.1| ComEC/Rec2 family protein [Neorickettsia risticii str. Illinois]
gi|254589945|gb|ACT69307.1| ComEC/Rec2 family protein [Neorickettsia risticii str. Illinois]
Length = 734
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 84/167 (50%), Gaps = 5/167 (2%)
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMA 150
+ +A+ + F++ HFH + V G+ AN +AIP SF+VIP +LLM L + + +++
Sbjct: 452 FATAATTPFVLYHFHYLSVIGVAANAIAIPFTSFLVIPTLAGILLLMPLHDSELLYALLS 511
Query: 151 WGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITI 209
+ I++ + S + F + T+ +V LL++ T R++G + I + +
Sbjct: 512 TEIKILLSLMESFSHLNLGYFNVQGFSGTTLFVMVTGTLLLLIGTTWKRYLGIMPIAMGV 571
Query: 210 IILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSN-PPSFIFSQW 255
++ +S PD+ ISEK + D N N P +FI +W
Sbjct: 572 AMI---KFSPLPDIFISEKNIAIRSQDNNLYFLNAPRIPQNFIAKKW 615
>gi|218659310|ref|ZP_03515240.1| hypothetical protein RetlI_06426 [Rhizobium etli IE4771]
Length = 190
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 12/106 (11%)
Query: 63 ESHNTWTWKKISS---IKQSFLNEIRANIGTYGSA---------SASIFLIKHFHCIPVY 110
+ W +++ +K L + A G +G S ++F ++HFH + Y
Sbjct: 85 SGYQLWKERRVRENPLLKLPVLRPVVAVAGFFGGVFLTSLIGGFSTALFAVEHFHRLTAY 144
Query: 111 GLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
GL AN+ +PI+SF+V+PAGL+A+LLM LD + V+ + LD++
Sbjct: 145 GLPANLATMPIISFIVMPAGLLAMLLMPFGLDAPLWTVVGFCLDVV 190
>gi|85703339|ref|ZP_01034443.1| competence protein [Roseovarius sp. 217]
gi|85672267|gb|EAQ27124.1| competence protein [Roseovarius sp. 217]
Length = 680
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HF+ +GL+AN++++P++ +V+PA +IA LL+ L +D I VM GL I+ +A
Sbjct: 426 HFNQYAQFGLLANLVSVPLMGALVMPAAVIATLLVPLGMDWIALRVMELGLRWILGVAEW 485
Query: 163 ISVAHNEFCIGRIPETS---FVTIVVEF--LLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
++ R+P + +V ++ F L +V + R +G+ IIL T +
Sbjct: 486 VTALDGA----RVPVVAPGPYVLPLLAFGALFIVLWQGRTR-----FLGVLPIILGTLFW 536
Query: 218 SFS--PDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
SF+ P +++S+ G L+ ++ + N F+ W
Sbjct: 537 SFTERPVMVVSDTGTLIGIMTEAGRALNKPTGGGFVADNW 576
>gi|149184610|ref|ZP_01862928.1| predicted membrane metal-binding protein [Erythrobacter sp. SD-21]
gi|148831930|gb|EDL50363.1| predicted membrane metal-binding protein [Erythrobacter sp. SD-21]
Length = 721
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW-----GLDIII 157
HFH +YG AN++AIP+++FV +P LIAI L+LD I G W LD+++
Sbjct: 458 HFHRAGLYGAFANVIAIPLVTFVSMP--LIAI---ALTLDLIGLGAPVWWFAGQSLDLLL 512
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTI---VVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
IAH + A + +P T+ V L + + R +G + + ++L
Sbjct: 513 LIAH--TTAEQPGAVRLVPHIGLPTVLLCVAGGLWLALWRGRARILGLVPASLGALLL-- 568
Query: 215 FPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
S +PD+LI+ G V LVD + + + P
Sbjct: 569 -SISAAPDILIARDGRDVGLVDGDGRLFVLRDSPG 602
>gi|126735651|ref|ZP_01751396.1| competence protein, putative [Roseobacter sp. CCS2]
gi|126714838|gb|EBA11704.1| competence protein, putative [Roseobacter sp. CCS2]
Length = 720
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 10/218 (4%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F HF+ I YGLIAN+L++P++ +V+PA ++A+ L L +I +M GL I+
Sbjct: 426 FAAAHFNQIAHYGLIANVLSVPLMGVLVMPAAVLAVCLAPFGLWSIGLWLMEIGLRWILF 485
Query: 159 IAHRISVAHNEFCIGRI--PETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+A +S E +G + P+ + I+ LL + I + I +L+
Sbjct: 486 VAATVSA--REGALGHVWAPDWYVLPILSLGLLWIVLVAGRGKIAGALAVICAGVLWH-- 541
Query: 217 YSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQE 276
+ P LLI++ G+L+ L I + F+ W P + ++ L+
Sbjct: 542 QTERPALLIADSGSLIGLSGAEGRILSKPTGNGFVAGIWLENDGAPVPQVQAASRDGLRV 601
Query: 277 KNQSSLKEI--LRSMQPRKFLCIKKSFCVGCHRSDVIV 312
+ + ++ R +Q + VGC +DV++
Sbjct: 602 QGRVIAADLGDWRVLQVSGKTALAD--LVGCDGADVLI 637
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 23 LSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
LSPP+GPA PG FDF +++ + A+GY
Sbjct: 173 LSPPAGPAEPGGFDFQRHAWFLQLGAVGY 201
>gi|163746570|ref|ZP_02153928.1| competence protein, putative [Oceanibulbus indolifex HEL-45]
gi|161380455|gb|EDQ04866.1| competence protein, putative [Oceanibulbus indolifex HEL-45]
Length = 522
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 82/163 (50%), Gaps = 22/163 (13%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HF+ + YGL+AN+L++P++ +VIPA ++A+L+ L+ IP M GL I+ +A
Sbjct: 266 HFNTVSHYGLVANLLSVPLMGVLVIPAAVLAVLIAPFGLEGIPLWAMGLGLRWILFVAEG 325
Query: 163 ISVAHNEFCIGRIPET-SFVTIVVEFLL---------MVFCKTNIRHIGSIMIGITIIIL 212
+S +P SFV ++L ++ + ++R +G ++ +++I+
Sbjct: 326 VS---------NLPGARSFVPGPGGWVLPLLALGFLWLLIWQGSLRWLGCPVMVLSLIV- 375
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
+ + PD+L+++ G LV ++ + FI W
Sbjct: 376 --WQATTRPDVLVADTGTLVGIMTAEGRALSREKGAGFIARNW 416
Score = 43.1 bits (100), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
A LSPP+GP PG FDF +++ G+ A+GY
Sbjct: 7 AHLSPPAGPVEPGGFDFQRHAWFAGLGAVGY 37
>gi|83858369|ref|ZP_00951891.1| ComEC/Rec2 family protein [Oceanicaulis alexandrii HTCC2633]
gi|83853192|gb|EAP91044.1| ComEC/Rec2 family protein [Oceanicaulis alexandrii HTCC2633]
Length = 680
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 86/189 (45%), Gaps = 12/189 (6%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTY------GSASASIFLIKHFH 105
F ++ +I S +++ W + S + +++ + A+ F I HF
Sbjct: 362 FSAVAALIASFDAYKRW--RPEGGFSTSLIGKVKDALAGLSATSLIAGAATGAFAIFHFQ 419
Query: 106 CIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISV 165
+ YGLIAN+LA+P+ +F V+PAG A++ L L+ VM GL ++ IA+ S
Sbjct: 420 RMAAYGLIANLLAMPVFTFWVMPAGGAALVFSPLGLERPFLWVMDQGLRRVLDIAYWASS 479
Query: 166 AHNEFCIGRIPETSFVTIV-VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLL 224
+ + V + + F +V +R G +I I I + F P ++
Sbjct: 480 LDGAVVGANAADPALVALYGLGFACLVIGLGWMRVTGGALIAIAIGL---FMVQTPPQMM 536
Query: 225 ISEKGNLVA 233
I++ G ++A
Sbjct: 537 ITDGGVVLA 545
>gi|298291807|ref|YP_003693746.1| ComEC/Rec2-related protein [Starkeya novella DSM 506]
gi|296928318|gb|ADH89127.1| ComEC/Rec2-related protein [Starkeya novella DSM 506]
Length = 793
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 107/242 (44%), Gaps = 40/242 (16%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HF + LIAN+ A+P +SF+V+PAGL+ +LM D+ + +M WG+D++ IA
Sbjct: 475 HFQRLAPLSLIANLAAMPAVSFIVMPAGLVGAVLMPFGWDDRAWRLMGWGIDLMRDIADF 534
Query: 163 IS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
++ + + + +P S V + + + + +T + + ++ I+ L+ P
Sbjct: 535 VARIPGADRGVSAMPMASLVLLSLALMALCLSRTRLILLAPVL---AILALWIAAREPRP 591
Query: 222 DLLISEKGNLVALVDKNTLISNYSNPPS-----FIFSQWKSALITPFHEAPHVQKEDLQE 276
DL + + VA+ + ++ + S F QW SA +
Sbjct: 592 DLFVDGEARTVAVRGPDGALAVMGDRTSGLADRFAVEQWLSA---------------DGD 636
Query: 277 KNQSSLKEILRSMQPRKFLCIKKSFC--VGCHR---SDVIVGVLKRKDMIRLSCQLSDIL 331
+ ++ KE+ I+ + C +GC +V + + D + C+L+ +L
Sbjct: 637 RARAGSKEL-----------IQAAACDPLGCTLPLVGGALVALSRHPDSLEDDCRLARVL 685
Query: 332 IT 333
+T
Sbjct: 686 VT 687
>gi|88608712|ref|YP_506207.1| ComEC/Rec2 family protein [Neorickettsia sennetsu str. Miyayama]
gi|88600881|gb|ABD46349.1| ComEC/Rec2 family protein [Neorickettsia sennetsu str. Miyayama]
Length = 736
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 5/167 (2%)
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMA 150
+ +A+ + F+ HFH + V G+ AN +AIP SF+VIP +LLM L + + +++
Sbjct: 452 FATAATAPFISYHFHYLSVIGVAANAIAIPFTSFLVIPTLAGILLLMPLYDSELLYALLS 511
Query: 151 WGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITI 209
+ I++ + S + F + T+ + +V L ++ T R++G + I + I
Sbjct: 512 TEIKILLSLMESFSHLNLGYFNVQGFSGTTLLVMVTGTLSLLIGTTWKRYLGIMPIAMGI 571
Query: 210 IILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSN-PPSFIFSQW 255
++ +S PD+ ISEK + D N N S P +FI +W
Sbjct: 572 AMI---KFSPLPDIFISEKNIAIRSQDNNLYFLNASRVPQNFIAKKW 615
>gi|260576321|ref|ZP_05844312.1| ComEC/Rec2-related protein [Rhodobacter sp. SW2]
gi|259021392|gb|EEW24697.1| ComEC/Rec2-related protein [Rhodobacter sp. SW2]
Length = 704
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 22/223 (9%)
Query: 81 LNEIRANIGT--YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI 138
L+ + A + T YG+A+ F+ I YG AN+L +P++ VV+PAG IA LL
Sbjct: 416 LSSLLAGLATAPYGAAT--------FNRIADYGFFANLLTVPVMGAVVMPAGAIAALLAP 467
Query: 139 LSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV-VEFLLMVFCKTNI 197
+ L ++P VM G I+ ++ I+ +P + ++ + L ++ + +
Sbjct: 468 IGLQDLPLWVMGRGSAWILWVSFWIAGMEGSVTAVPVPGPWVIPLITLGGLWLILWRGWL 527
Query: 198 RHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKS 257
R G + + + +++ + PD LIS G LV L+ + F W
Sbjct: 528 RGAGLVPMALALVL---WAGVQRPDALISADGGLVGLMGPEGRAVSSPRGAGFAAKSWLE 584
Query: 258 ALITPFHEAPHVQKEDLQEKNQSSLKEILRS--MQPRKFLCIK 298
+ ++ D E+ S + RS + P + + +K
Sbjct: 585 ------DDGDLAEQVDAAERAGFSGDKGARSFVLGPWRAVVLK 621
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 23 LSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLN 82
L PP GP PG FDF +++ + AIGY S P ++ + ++I+ + N
Sbjct: 176 LGPPEGPVEPGGFDFQRMAWFDRLGAIGYTAS-PVLLLERPADGE---QRINRWRTRLSN 231
Query: 83 EIRANI-GTYGSASASI 98
I A + G G+ S+ +
Sbjct: 232 AIMAEVPGDAGAFSSGV 248
>gi|296117483|ref|ZP_06836070.1| putative DNA uptake protein [Gluconacetobacter hansenii ATCC 23769]
gi|295976004|gb|EFG82795.1| putative DNA uptake protein [Gluconacetobacter hansenii ATCC 23769]
Length = 814
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 81/161 (50%), Gaps = 4/161 (2%)
Query: 101 IKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIA 160
+ HF + + ++AN++A+P+ + ++P + A++LM + LD++ M WG ++I +A
Sbjct: 529 MAHFADVGAWFVLANLIAVPLAALWIMPCAMGALVLMPVGLDSLALVPMGWGNAVVIWLA 588
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF- 219
H ++ +G +P+ + + F + + R I + I I P+
Sbjct: 589 HHVAAWPGAH-VG-VPQMPMWGLGLYFAGLCWLCLWTRPTWRICGVMPIAIAMVTPWMVR 646
Query: 220 SPDLLISEKGNLVALVDK-NTLISNYSNPPSFIFSQWKSAL 259
+PD++I +G ++A+VD L++ + SF+ W L
Sbjct: 647 APDVIIPAQGRMLAVVDGPRLLVAPKGHVDSFVLRDWVRVL 687
>gi|330994166|ref|ZP_08318094.1| ComE operon protein 3 [Gluconacetobacter sp. SXCC-1]
gi|329758633|gb|EGG75149.1| ComE operon protein 3 [Gluconacetobacter sp. SXCC-1]
Length = 708
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/202 (19%), Positives = 95/202 (47%), Gaps = 14/202 (6%)
Query: 59 IYSSESHNT-WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANIL 117
+ S+ H+ W + + + + L + A GSA + + HF + + ++AN+L
Sbjct: 394 VLSAWGHDVMWMRRVGARMARPLLASVLA-----GSACLPVGM-AHFGTVQPWFVLANLL 447
Query: 118 AIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS-VAHNEFCIGRIP 176
A+P++S ++P GL+++LLM L + + M WG+ ++ +AH ++ + + +
Sbjct: 448 AVPLMSVWIMPWGLVSLLLMPLGAEKLALAPMGWGIGVVAWLAHLVAGLPVARVSVPAMG 507
Query: 177 ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY-SFSPDLLISEKGNLVALV 235
V + +R +G+ + +++ P+ P +L++ +V +V
Sbjct: 508 GGGLVLFFAGLCWLCLWAGRVRLLGA----LPVVLAVLSPWVGRMPVVLVAPDARMVGVV 563
Query: 236 DKNTLISN-YSNPPSFIFSQWK 256
+++ ++P F+ +W+
Sbjct: 564 AGGQVLTGPGTHPDPFVLREWQ 585
>gi|316933938|ref|YP_004108920.1| ComEC/Rec2-like protein [Rhodopseudomonas palustris DX-1]
gi|315601652|gb|ADU44187.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris DX-1]
Length = 754
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 123/283 (43%), Gaps = 37/283 (13%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HFH I YG+++N++A+P++S +V+PAG++ + M LD + +M G+D +I +A
Sbjct: 461 HFHRITPYGVLSNLVAMPVVSAIVMPAGMLGLAAMPFGLDAPFWRIMEIGIDWMIVVAQ- 519
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMV---FCKTNIRHIGSIMIGITIIILFTFPYSF 219
VA +GR+ ++V L +V +T +R G ++G+ I + +
Sbjct: 520 -WVAALPGAVGRVTAFGAGPLLVASLGLVLIGLLRTPLRWGG--LLGLIAAIGWAA-LTP 575
Query: 220 SPDLLISEKGNLVALVDKNTLIS-NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKN 278
P++LI+ G VA+ + + S +F +W +A D + +
Sbjct: 576 QPEVLIAGDGKQVAVRGADGRLHLMQSGADAFRLKEWLAA------------DADARPPD 623
Query: 279 QSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDI 338
+SL R + CV +V + R D + C + +++T +
Sbjct: 624 AASL---------RAGVSCDSDGCVTALADGRLVALSLRPDGLADDCARAVLIVTAGQ-- 672
Query: 339 NTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSA 381
C + E LQ G++ + + D ++F+ + A
Sbjct: 673 PPPGCAARTIGRDE-LQSNGAMALR----RSAADPMQFVTEPA 710
>gi|85374134|ref|YP_458196.1| membrane metal-binding protein [Erythrobacter litoralis HTCC2594]
gi|84787217|gb|ABC63399.1| predicted membrane metal-binding protein [Erythrobacter litoralis
HTCC2594]
Length = 741
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 18/147 (12%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW-----GLDIII 157
HFH VYG +AN++AIP+++F+ +P LIAI L+LD + G W LD+++
Sbjct: 469 HFHRAGVYGALANVIAIPLVTFISMP--LIAI---ALALDAVGLGEPVWWLVGQSLDLLL 523
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTI---VVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
IAH S + +P+ T+ V L + K R +G + ++L
Sbjct: 524 GIAHFTS--SQPGAVKLMPQMGLGTLSLFVAGGLWLALWKGRRRLLGFAPVAAGTLLLLL 581
Query: 215 FPYSFSPDLLISEKGNLVALVDKNTLI 241
P PD+LIS G V + + N LI
Sbjct: 582 TPV---PDILISGDGRHVGIAEDNRLI 605
>gi|88606770|ref|YP_504918.1| ComEC/Rec2-related protein [Anaplasma phagocytophilum HZ]
gi|88597833|gb|ABD43303.1| ComEC/Rec2-related protein [Anaplasma phagocytophilum HZ]
Length = 705
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 48/268 (17%)
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
+ A + S + + ++I HFH + G++AN++A+P +FVVIP G++ ++
Sbjct: 403 VTATVSLIASLATAPYVIYHFHEFSIAGVLANVIAVPTATFVVIPLGVLYLITCDTFFAP 462
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
I ++ W + +I+IAH ++ IP +S + + + L C IR G
Sbjct: 463 IIAFLLEWAVGFLIYIAHCTALTELFTSFRSIPSSSVLLVTLGLLTASLCTGCIRLFGG- 521
Query: 204 MIGITIIILFTFPYSFS------PDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWK 256
++FTF + S PD++ + +V D N + + F ++QW
Sbjct: 522 -------VIFTFLGTVSAITYKTPDIICDDTAVVVKGRDANLYFVMQNGSTRGFKYAQWA 574
Query: 257 SALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLK 316
++ Q +K+ +Q + +C + GC D VL
Sbjct: 575 ------------------RDNGQGRIKQQGEFLQDKMLVCEEG----GCIYKD---HVLI 609
Query: 317 RKDMIRLSCQLSDILITTIRDINTKLCN 344
D S L+ +++N +CN
Sbjct: 610 TSD--------SSFLVAHCKNMNLIICN 629
>gi|170738988|ref|YP_001767643.1| ComEC/Rec2-related protein [Methylobacterium sp. 4-46]
gi|168193262|gb|ACA15209.1| ComEC/Rec2-related protein [Methylobacterium sp. 4-46]
Length = 738
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 105/271 (38%), Gaps = 31/271 (11%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F HF I +G++ N L +P++S VV+PA ++ +L +LD + M + ++
Sbjct: 456 FATYHFQNIQPFGVVGNALTLPLVSVVVMPAAVLGMLAYPFTLDRPVWWTMGLAVRGMLD 515
Query: 159 IAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI--MIGITIIILFTF 215
I+ I+ H + + + LL+ +R +G + ++G+ +
Sbjct: 516 ISAWIAGFDHAVVIVPAFGAGALGLLTAALLLLTLPSPRLRVLGVLPALVGVALAA---- 571
Query: 216 PYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQ 275
+ PDL + +G AL + +++ PP+F QW A D +
Sbjct: 572 -RAERPDLYVDREGAGAALRGADGRLASLGRPPAFGLEQWLRA------------DGDAR 618
Query: 276 EKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTI 335
+ SL R C CV R+ V +++ K C +DI+I
Sbjct: 619 PRGDPSLARAER--------C-DAVGCVATARNGWRVALVRDKRAFEADCARADIVIA-- 667
Query: 336 RDINTKLCNVSLLITPEILQKQGSLEITIIP 366
R C L++ L G+ + P
Sbjct: 668 RATAPPGCAARLVLDRAFLAAHGATTVRFAP 698
Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIG 50
+K P IE ARL PP PA PG +DF +Y++GI A+G
Sbjct: 173 RKAAPLRPGDFIEAKARLLPPPEPARPGGYDFARDAYFRGIGAVG 217
>gi|83951833|ref|ZP_00960565.1| competence protein [Roseovarius nubinhibens ISM]
gi|83836839|gb|EAP76136.1| competence protein [Roseovarius nubinhibens ISM]
Length = 685
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F HF+ I YGL+AN++++P++ V+PA ++++ LM L + + +M GL I+
Sbjct: 423 FAAAHFNQIAHYGLLANLVSVPLMGVWVMPAAVLSVSLMPLGGEALGLWIMGLGLRWILG 482
Query: 159 IAHRISVAHNEFCIGRIPETSFV-TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+AH ++ + P + + L ++ + +R G + + + + +
Sbjct: 483 VAHWVAELDGARGVVTAPGPWVIPCLAWGALFVILWQGKLRFFGLLPV---VAGFWIWSG 539
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
+ P +LISE G LV ++ + + F+ W
Sbjct: 540 AERPKVLISEDGRLVGVMTEAGRALSRERGAGFVAMNW 577
>gi|220921516|ref|YP_002496817.1| ComEC/Rec2-like protein [Methylobacterium nodulans ORS 2060]
gi|219946122|gb|ACL56514.1| ComEC/Rec2-related protein [Methylobacterium nodulans ORS 2060]
Length = 736
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 101/274 (36%), Gaps = 29/274 (10%)
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
A+ + F HF + +G++ N L +P++S VV+PA ++ IL +LD + M +
Sbjct: 451 AATAPFATYHFQTLQPFGVVGNALTLPLVSAVVMPAAVLGILAYPFALDRPVWWAMGLAV 510
Query: 154 DIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
++ IA I H + + + + LL+ + +R +G + +
Sbjct: 511 RGMLDIAAWIRGFDHATLVLPAFGAGALTLLTLGLLLLTLPASRLRWLGLVPALAGLAAA 570
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
PDL + G A+ + ++ PP+F QW K
Sbjct: 571 A---RPERPDLYVDRDGAGAAVRVADGRLATLGRPPAFGLEQW--------------LKA 613
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
D + ++ L R C CV R+ V + + K C +DI+I
Sbjct: 614 DGRSRDDPGLARAER--------C-DAVGCVATARNGWRVALARDKRAFEADCARADIVI 664
Query: 333 TTIRDINTKLCNVSLLITPEILQKQGSLEITIIP 366
R C L+I L G+ + P
Sbjct: 665 A--RTTAPAACAARLVIDRAFLAAHGATTVRFAP 696
>gi|148556117|ref|YP_001263699.1| ComEC/Rec2-like protein [Sphingomonas wittichii RW1]
gi|148501307|gb|ABQ69561.1| ComEC/Rec2-related protein [Sphingomonas wittichii RW1]
Length = 714
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 122/305 (40%), Gaps = 49/305 (16%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HFH YG +AN++AIP+ +FV++P +A+LL I + + +++ L +++ IA
Sbjct: 446 HFHKSGFYGALANMVAIPLTTFVIMPLEALALLLDIAGIGAPAWWLVSQALALLLWIART 505
Query: 163 ISVAHNEFCIGRIPE---TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
++ A + +P +F + L + +T R G + + + P
Sbjct: 506 VAAAPGAVAM--LPTMAWGAFALMAAGGLWLALWRTRARRWGLLPVAAGALWALLSP--- 560
Query: 220 SPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDL----- 274
+PDLL++ G VA V + + + + + + EA V E L
Sbjct: 561 TPDLLVTGDGRHVAFVLGDGRV-------ALLRDRAGDYIRGVLGEAAGVDAEALPVDAL 613
Query: 275 -QEKNQSSL--KEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLS--CQLSD 329
Q + + L +I R + + L + + R D RLS C +D
Sbjct: 614 MQARCSADLCITDIQRGGRRWRILATRSPY---------------RLDWTRLSRACAAAD 658
Query: 330 ILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
I I+ R + L I +L + G L I D D+ +A H PW
Sbjct: 659 IAISE-RRLPRGCTPRWLKIDRPLLARTGGLAI-------DLDRGAVDSVAAAVGRH-PW 709
Query: 390 TKHRI 394
+ R+
Sbjct: 710 STFRM 714
>gi|148284699|ref|YP_001248789.1| ComEC/Rec2 family protein [Orientia tsutsugamushi str. Boryong]
gi|146740138|emb|CAM80336.1| ComEC/Rec2 family protein [Orientia tsutsugamushi str. Boryong]
Length = 682
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 89/176 (50%), Gaps = 14/176 (7%)
Query: 91 YGSASASI----FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
Y SA ASI +I HF+ P Y ++AN+L +P+ +F V+P L+++LLM +++N
Sbjct: 416 YSSAFASIATAPIVIYHFYSFPNYSVLANLLIVPLTAFWVMPLTLVSLLLMPFNIENYSL 475
Query: 147 GVMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
+ G+D+II IA IS + + G I + S + + FL +V R IG ++I
Sbjct: 476 LLAGQGVDVIIKIAKIISTLPYAVTYFGHIDDVSLLLYLFGFLWVVIWHKCWRMIGVVII 535
Query: 206 GITIIILFTFPYSFSPDLLISEKGNLVALVDKNT----LISNYSNPPSFIFSQWKS 257
I II PDL+ + G L AL KN I SN P F + W +
Sbjct: 536 IIAIIRAALVS---KPDLVFN--GELTALGIKNANSKFEIHASSNIPDFFLNYWSN 586
>gi|114327479|ref|YP_744636.1| DNA translocation competence protein ComA [Granulibacter
bethesdensis CGDNIH1]
gi|114315653|gb|ABI61713.1| DNA translocation competence protein ComA [Granulibacter
bethesdensis CGDNIH1]
Length = 710
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 18/178 (10%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G+ASA + I HF + +Y + N++A+P+++F V+PAGL+A+ LM L LD F VM
Sbjct: 417 GTASAP-YGIYHFGQLQLYFVATNLIAVPLMAFWVMPAGLLAMALMPLGLDRPVFVVMGI 475
Query: 152 GLDIIIHIAH-RISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIG-SIMI-GIT 208
G+ +I+ +A ++ + +P I + + + +R G +M+ GI
Sbjct: 476 GIRLILTVAKLVAALPAAVLAVPPMPGWGLFMISAGLIWLCLWRGRVRLCGVPVMVAGIA 535
Query: 209 IIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEA 266
+ L + DLLIS +VA+ + P F F + S L+T +A
Sbjct: 536 SVWL-----TVHADLLISADARMVAV---------KAGPRVFAFDKGSSPLLTEAWQA 579
>gi|67458412|ref|YP_246036.1| ComEC/Rec2-related protein [Rickettsia felis URRWXCal2]
gi|67003945|gb|AAY60871.1| ComEC/Rec2-related protein [Rickettsia felis URRWXCal2]
Length = 404
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 113/254 (44%), Gaps = 31/254 (12%)
Query: 91 YGSASASIF----LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
Y S ASI +I F Y + AN++ +PI SF ++P L+++ ++ D+
Sbjct: 150 YSSFLASIITVPVVINQFFIFSTYSVPANLIVVPITSFFLMPLALLSLPFTMIGFDSYIL 209
Query: 147 GVMAWGLDIIIH-IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
+M + +DIII A+ S+ + + G I S + + F + KT+ R +G +++
Sbjct: 210 KLMRFFIDIIIKSAAYFNSLPRSVWYFGYITNFSILLFLFGFFWICIWKTSWRLLGLVIM 269
Query: 206 GITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNP-PSFIFSQW------KSA 258
I+ I +F YS P+L+ V + DK+ + Y++ P+F + W K +
Sbjct: 270 IISFIFMF---YSPKPELIFDTNHMAVGIKDKDGKLIIYADKIPTFNRTYWANWFGQKDS 326
Query: 259 LITPFHE----APHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIV-- 312
++ P + H QK + N EI I ++ CH S + +
Sbjct: 327 MVLPLKDNIFITNHGQKIVINNNNHCEKAEI----------HINLNYKAKCHGSLITINH 376
Query: 313 GVLKRKDMIRLSCQ 326
L++ +I + C
Sbjct: 377 NFLRKSPVILIFCN 390
>gi|73667202|ref|YP_303218.1| ComEC/Rec2-related protein [Ehrlichia canis str. Jake]
gi|72394343|gb|AAZ68620.1| ComEC/Rec2-related protein [Ehrlichia canis str. Jake]
Length = 672
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 98/186 (52%), Gaps = 9/186 (4%)
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI 132
I++I Q FL+ I +++ G A+ +++ HF+ + G+ AN+LAIPI +F+++P GL
Sbjct: 389 INNILQYFLSIIVSSL-IAGLATLP-YVVYHFNYFSIAGVFANLLAIPITTFLIMPLGLF 446
Query: 133 AILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI--GRIPETSFVTIVVEFLLM 190
I+L +++L+ ++ + ++I++ IS N+ + TS + I FL +
Sbjct: 447 YIILGVVNLEYYVSWMIESAVGLLIYVVQYIS-GMNKLVLLFHAFSSTSILIITFGFLFL 505
Query: 191 VFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVD-KNTLISNYSNPPS 249
N+R G I++ + + +PD++I++ +V +D K I+ ++ S
Sbjct: 506 CLWNGNLRFCGLILVACGFFVGVNYV---TPDIMINQHNVVVKELDNKLYAINQKAHLTS 562
Query: 250 FIFSQW 255
FI W
Sbjct: 563 FINLTW 568
>gi|189183210|ref|YP_001936995.1| hypothetical protein OTT_0303 [Orientia tsutsugamushi str. Ikeda]
gi|189179981|dbj|BAG39761.1| hypothetical protein OTT_0303 [Orientia tsutsugamushi str. Ikeda]
Length = 682
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 92/178 (51%), Gaps = 18/178 (10%)
Query: 91 YGSASASI----FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
Y SA ASI +I HF+ P Y ++AN+L +P+ +F V+P LI++LLM +++N
Sbjct: 416 YSSAIASIATAPIVIYHFYSFPNYSVLANLLIVPLTAFWVMPLTLISLLLMPFNIENYFL 475
Query: 147 GVMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
+ G+D+II IA IS + + G I + S + + FL +V I H MI
Sbjct: 476 LLAGQGVDVIIKIAKIISTLPYAVTYFGHIDDVSLLIYLFGFLWLV-----IWHKPWRMI 530
Query: 206 GITIIILFTFPYSF--SPDLLISEKGNLVALVDKNT----LISNYSNPPSFIFSQWKS 257
G+ III+ + PDL+ + G L AL KN+ I SN P F + W +
Sbjct: 531 GVVIIIIAIIRTALVSKPDLVFN--GELTALGIKNSNSKFEIHASSNMPEFFLNYWSN 586
>gi|213018700|ref|ZP_03334508.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|212995651|gb|EEB56291.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 600
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 113/251 (45%), Gaps = 24/251 (9%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
+ I +F+ + G+I N++AIPI++ ++IP G+I +LL+ L ++ I + +D I+
Sbjct: 335 YTIYNFNYFSISGIITNLIAIPIVTLIIIPLGIIYVLLIPLGIEWIIAPFIERPIDSILC 394
Query: 159 IAHRISVAHNEFCIGR-IPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
I + I+ R P +S + I + L + + N R G I ++ +F+
Sbjct: 395 ITNAIASLQYLVIPTRTFPGSSIIIITLGLLWLCLWERNWRFFGIFFI---VLGIFSSAM 451
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEK 277
+PD+L+S NL D N L S +F+ W Q Q
Sbjct: 452 YTTPDILVSA-DNLAVKEDDNLLYSLTRKNRNFVVKTWAK------------QNGQNQIV 498
Query: 278 NQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRD 337
N + + ++ + CI + G ++S ++ KR+D++ +C D++I +
Sbjct: 499 NHTKFSNSNKRLKCNDYGCI---YNKGNNKSVLLAH--KREDILE-NCNNVDLVI-QLSK 551
Query: 338 INTKLCNVSLL 348
N CN ++
Sbjct: 552 FNYPACNTKII 562
>gi|190571303|ref|YP_001975661.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190357575|emb|CAQ55014.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 674
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 113/251 (45%), Gaps = 24/251 (9%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
+ I +F+ + G+I N++AIPI++ ++IP G+I +LL+ L ++ I + +D I+
Sbjct: 409 YTIYNFNYFSISGIITNLIAIPIVTLIIIPLGIIYVLLIPLGIEWIIAPFIERPIDSILC 468
Query: 159 IAHRISVAHNEFCIGR-IPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
I + I+ R P +S + I + L + + N R G I ++ +F+
Sbjct: 469 ITNAIASLQYLVIPTRTFPGSSIIIITLGLLWLCLWERNWRFFGIFFI---VLGIFSSAM 525
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEK 277
+PD+L+S NL D N L S +F+ W Q Q
Sbjct: 526 YTTPDILVSA-DNLAVKEDDNLLYSLTRKNRNFVVKTWAK------------QNGQNQIV 572
Query: 278 NQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRD 337
N + + ++ + CI + G ++S ++ KR+D++ +C D++I +
Sbjct: 573 NHTKFSNSNKRLKCNDYGCI---YNKGNNKSVLLAH--KREDILE-NCNNVDLVI-QLSK 625
Query: 338 INTKLCNVSLL 348
N CN ++
Sbjct: 626 FNYPACNTKII 636
>gi|241762544|ref|ZP_04760619.1| ComEC/Rec2-related protein [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|241372872|gb|EER62559.1| ComEC/Rec2-related protein [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 859
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
G A S + HFH YG +ANILAIP+ +FV IPA +A+L ++ + V
Sbjct: 558 GVMVEAVVSPITLYHFHQSGFYGALANILAIPLTTFVTIPAEGLALLTDLIGCSAPFWWV 617
Query: 149 MAWGLDIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI--MI 205
+ +++ IAH + S+ F + I + ++ +L + KT+ R G + ++
Sbjct: 618 TDQSIRLLLAIAHYVASLPMAGFMLPMIGAWLCLFMMASWLWLGLWKTSWRLWGVVPLVL 677
Query: 206 GITIIILFTFPYSFSPDLLISEKGNLVALVDKN 238
G+ +IIL + PD +IS G +A N
Sbjct: 678 GVLMIIL-----NPRPDWVISRDGKTIAFKTDN 705
>gi|159044353|ref|YP_001533147.1| putative competence protein [Dinoroseobacter shibae DFL 12]
gi|157912113|gb|ABV93546.1| putative competence protein [Dinoroseobacter shibae DFL 12]
Length = 694
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 8/156 (5%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HF+ + YGLIAN+ ++P++ +V+P L+A+ + L L+ + M G+ I+ +A
Sbjct: 415 HFNIVGHYGLIANLASVPVMGTLVMPGALVALAGVPLGLEGVGLFAMEVGIRWILWVAG- 473
Query: 163 ISVAHNEFCIGRIPETSFVT---IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
+VA E +G + V IV+ L++ R G + ++ L + S
Sbjct: 474 -TVAGLEGAVGHVVRPMPVVLPLIVLGALVVGLLPWRARWAG---LAPVVLALGLWTQSD 529
Query: 220 SPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
P+LLIS+ G L+ ++ + + F W
Sbjct: 530 RPELLISDTGGLLGVMTEQGRALSKGRGDGFAARNW 565
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 23 LSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLN 82
LSPP+ P PG FDF ++++G+ A+GY +P ++++ + ++ +++ +
Sbjct: 157 LSPPNAPVEPGGFDFRRHAWFEGLGAVGY-TRVPVVLWAEPAQLSFA-ERVYETRLKLSK 214
Query: 83 EIRANIGTYGSASASIFLIKHFHCI 107
IR I A AS + I
Sbjct: 215 AIRDRIAGQPGAFASAIITGDRAAI 239
>gi|260753438|ref|YP_003226331.1| ComEC/Rec2-related protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258552801|gb|ACV75747.1| ComEC/Rec2-related protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 853
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
G A S + HFH YG +ANILAIP+ +FV IPA +A+L ++ + V
Sbjct: 558 GVMVEAVVSPITLYHFHQSGFYGALANILAIPLTTFVTIPAEGLALLTDLIGCSAPFWWV 617
Query: 149 MAWGLDIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI--MI 205
+ +++ IAH + S+ F + I + ++ +L + KT+ R G + ++
Sbjct: 618 TDQSIRLLLAIAHYVASLPMAGFMLPMIGAWLCLFMMAGWLWLGLWKTSWRLWGVVPLVL 677
Query: 206 GITIIILFTFPYSFSPDLLISEKGNLVALVDKN 238
G+ +IIL + PD +IS G +A N
Sbjct: 678 GVLMIIL-----NPRPDWVISRDGKTIAFKTDN 705
>gi|83942600|ref|ZP_00955061.1| competence protein [Sulfitobacter sp. EE-36]
gi|83846693|gb|EAP84569.1| competence protein [Sulfitobacter sp. EE-36]
Length = 682
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 2/154 (1%)
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
HF+ I YGL+AN+L++P++ +V+PA + A+++ L L+ IP VM GL I+ +A
Sbjct: 421 AHFNTIAQYGLVANLLSVPLMGILVMPAAVAALVMAPLGLEWIPLQVMGAGLRWILLVAQ 480
Query: 162 RISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
VA + G + + + L ++ + +G I + + P
Sbjct: 481 --GVAEIDGAQGHVAAPGPWVLPLLALGFLWLLLWQGWLRFAGLGAVIAAGVLWHGAERP 538
Query: 222 DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
+LIS+ G+LV ++ + + F+ W
Sbjct: 539 TVLISDTGSLVGVMTPTGRALSKAKGAGFVALNW 572
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 23 LSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
LSPPSGP P FDF +++ G+ A+GY
Sbjct: 165 LSPPSGPVEPEGFDFQRHAWFAGLGAVGY 193
>gi|39935969|ref|NP_948245.1| ComEC/Rec2-like protein [Rhodopseudomonas palustris CGA009]
gi|39649823|emb|CAE28345.1| possible DNA uptake protein, ComEC [Rhodopseudomonas palustris
CGA009]
Length = 755
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HFH I YG+++N+ A+P++S +V+PAGL+ + M LD + +M G+D +I +A
Sbjct: 461 HFHRITPYGVLSNLAAMPVVSAIVMPAGLLGLAAMPFGLDAPFWRIMELGIDWMILVAQ- 519
Query: 163 ISVAHNEFCIGRIPETSFVT-----IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
VA +GR+ T+F T + +++ ++ +R G++ +G+ + P
Sbjct: 520 -WVASLPGAVGRV--TAFGTGPLLVASLGIVMLGLLRSPLRWGGALAVGVAVAWAALTP- 575
Query: 218 SFSPDLLISEKGNLVALVDKNTLIS-NYSNPPSFIFSQWKSA 258
P++LI+ G VA+ + + S +F +W +A
Sbjct: 576 --QPEVLIAGDGRQVAVRGADGRLHLMQSGADAFRLKEWLAA 615
>gi|83311901|ref|YP_422165.1| membrane metal-binding protein [Magnetospirillum magneticum AMB-1]
gi|82946742|dbj|BAE51606.1| Predicted membrane metal-binding protein [Magnetospirillum
magneticum AMB-1]
Length = 714
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 109/245 (44%), Gaps = 28/245 (11%)
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
+ +++ I HF+ V+ + AN++A+P+ F V+P L+ +L+ L+++ + WG++
Sbjct: 416 ATAVYGIHHFNRFAVWSVAANMIAVPLTGFWVMPWALVMFVLLPFGLESLALVPLGWGVE 475
Query: 155 IIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
+ +A + S + + +P + V + + + R G + + + +
Sbjct: 476 GVNWVATWVASWPSSAVTLPILPLWAMVVFTLGGCWLCLWRGRWRWWGLLPMAVAVA--- 532
Query: 214 TFPYSFSPDLLISEKGNLVAL-VDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ ++ PDLL+ +G+ +AL + L+ N I S P EAP
Sbjct: 533 SMAFARPPDLLVDGRGDGLALRTGEGRLLLNGKG--GRILKDTWSRRAGP--EAP----- 583
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGC-HRSDV-IVGVLKRKDMIRLSCQLSDI 330
+ K SS LR + GC R D +V ++K +D +C +DI
Sbjct: 584 ERWPKKSSSRDGRLRCDE------------TGCLWRVDGKVVALVKDEDNPEKACAGADI 631
Query: 331 LITTI 335
+++++
Sbjct: 632 VVSSV 636
>gi|163795625|ref|ZP_02189591.1| anthranilate phosphoribosyltransferase [alpha proteobacterium
BAL199]
gi|159179224|gb|EDP63757.1| anthranilate phosphoribosyltransferase [alpha proteobacterium
BAL199]
Length = 641
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYS-IPKMIYSSESHNTWTWKKISSIKQS 79
ARL PPS P PG FDF ++++GI A+G+ + + S + W+ + I+ +
Sbjct: 107 ARLRPPSAPVAPGAFDFQRDAFFRGIGAVGFAVGPVSVLGRGSARWDGRAWEAVDGIRDA 166
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCI--PVYGL-----IANILAIPILSFVVIPAGLI 132
IRA + + A+ L+ I P +A++LAI L ++ +
Sbjct: 167 VTRRIRAGLSDPAGSIAAAMLVGDRAGIDEPTAAAFRQTGLAHLLAISGLHMGLVAGTVF 226
Query: 133 AILLMILS 140
A++ + L+
Sbjct: 227 AVVRVALA 234
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 7/157 (4%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HF +PV G +AN++A+P+ +FV +PAG+ +++ M L+ P +M WG+D + A+
Sbjct: 376 HFQQVPVMGAVANVVAVPVTAFVTMPAGVASLVAMPFGLEAGPLTLMGWGIDATLWAANA 435
Query: 163 ISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIG-SIMIGITIIILFTFPYSFS 220
S + + + + L + +T IR +G +I+ G I + P
Sbjct: 436 ASDGPLTAIGVAALGTGPLAVLALGGLWLAIWRTAIRWLGVAIVGGAGIWSVLDRP---- 491
Query: 221 PDLLISEKGNLVAL-VDKNTLISNYSNPPSFIFSQWK 256
PD LIS G L A+ V+ + + F+ W+
Sbjct: 492 PDALISADGKLSAVHVEGQGWLVSQERGSGFVRDAWR 528
>gi|56552861|ref|YP_163700.1| ComEC/Rec2-related protein [Zymomonas mobilis subsp. mobilis ZM4]
gi|56544435|gb|AAV90589.1| ComEC/Rec2-related protein [Zymomonas mobilis subsp. mobilis ZM4]
Length = 853
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
G A S + HFH YG +ANILAIP+ +FV IPA +A+L ++ + V
Sbjct: 558 GVMVEAVVSPVTLYHFHQSGFYGALANILAIPLTTFVTIPAEGLALLTDLIGCSAPFWWV 617
Query: 149 MAWGLDIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI--MI 205
+ +++ IAH + S+ F + I + ++ +L + KT+ R G + ++
Sbjct: 618 TDQSIRLLLAIAHYVASLPMAGFMLPLIGAWLCLFMMAGWLWLGLWKTSWRLWGVVPLVL 677
Query: 206 GITIIILFTFPYSFSPDLLISEKGNLVALVDKN 238
G+ +IIL + PD +IS G +A N
Sbjct: 678 GVLMIIL-----NPRPDWVISRDGKTIAFKTDN 705
>gi|126731369|ref|ZP_01747176.1| competence protein [Sagittula stellata E-37]
gi|126708280|gb|EBA07339.1| competence protein [Sagittula stellata E-37]
Length = 686
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 86/165 (52%), Gaps = 5/165 (3%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G+A+A + + HF+ VYGL+AN++++P++ VV+P G++A LLM L LD I VMA
Sbjct: 402 GAATAPVGM-AHFNQASVYGLLANLVSVPVMGVVVVPLGVVAGLLMPLGLDWIALHVMAL 460
Query: 152 GLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITII 210
GLD I+ +A +S + + P TI L++ + R G I + + +
Sbjct: 461 GLDWILWVARAVSDWPGSVRPVVAPPPVVLPTIAAGGLVLCLWRGRARLAGLIPVAVAVA 520
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
+ + + PD+LI++ G+LV ++ + FI W
Sbjct: 521 L---WSQTQRPDVLIADNGSLVGIMTPQGRGLSRDQGAGFIADNW 562
>gi|146279123|ref|YP_001169282.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides ATCC 17025]
gi|145557364|gb|ABP71977.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides ATCC 17025]
Length = 671
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 4/165 (2%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G + + HF+ I YGL+ N++A+P++ +V+PA +A LL M
Sbjct: 400 GGVTTGPYAAAHFNRIATYGLMGNLIAVPMMELLVMPAAGVAALLAPFGASFPALWAMEL 459
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV-VEFLLMVFCKTNIRHIGSIMIGITII 210
G I+ +AH ++ P + I+ + L ++ + RH G ++G+
Sbjct: 460 GARWILWVAHWVAALPGSVGAVASPGPWVLPILTLGGLWLMLWRGRARHAG--LVGMAGA 517
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
L + + P LL+S G LV L+ + + F W
Sbjct: 518 FLL-WAQADRPPLLVSSDGALVGLLGPEGRALSSARGGGFAARSW 561
>gi|58039725|ref|YP_191689.1| putative DNA uptake protein [Gluconobacter oxydans 621H]
gi|58002139|gb|AAW61033.1| Putative DNA uptake protein [Gluconobacter oxydans 621H]
Length = 742
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 103/239 (43%), Gaps = 22/239 (9%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI--SSIKQSFLNEIRANIGTYG 92
F +F++ I+ G P M E W ++ S L + A + T
Sbjct: 411 FQMSFAAVMGLIAGYGALRE-PLMRLRGEGE----WYRVVASHCAALVLTSLMAGLATLP 465
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ A HF + + ++AN++A+P+ + ++P GL+A++ M + +M G
Sbjct: 466 VSMA------HFGALQPWFVLANLVAVPLAAVWIMPVGLLALVAMPFHAEAPFLKLMGMG 519
Query: 153 LDIIIHIAHRIS---VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITI 209
+ I+ +A R++ +AH + +P + +++ + K + G + I + +
Sbjct: 520 IRIVQTLAERVAAFPMAHQP--VPAMPGWGLLLVMLGLCFLCLWKGRVCLAGLLPIAVGL 577
Query: 210 IILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEAP 267
++ P PD+L+S L+A+ + L+ ++S+ W+ AL P P
Sbjct: 578 ASIWLAP---KPDVLVSPDAGLMAVRRQGVLLVGSHSSLQRRTLEDWQQALALPTAPLP 633
>gi|254440053|ref|ZP_05053547.1| Competence protein [Octadecabacter antarcticus 307]
gi|198255499|gb|EDY79813.1| Competence protein [Octadecabacter antarcticus 307]
Length = 697
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 124/268 (46%), Gaps = 28/268 (10%)
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
W K SI F++ + A + T + F HF+ I GLIAN++++P++ +V+PA
Sbjct: 396 WAK--SIGAVFISSLVAGLAT------APFAAFHFNQIAQLGLIANLMSVPLMGTLVMPA 447
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI----PETSFVTIVV 185
++A LL L L+ I VM GL I+ +AH VA + + + PE I +
Sbjct: 448 AVLAALLAPLGLEMIGLWVMDLGLRWILGVAH--FVAGQDGALRHVVTPGPEV-LALIAL 504
Query: 186 EFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYS 245
+ +V + +IR G + I+ + + P +LI++ G+L+ ++ + +
Sbjct: 505 GGIFVVQWRGSIRLAG---VAPVILGFALWQVAERPAVLIADSGSLIGVMTETGRDVSKE 561
Query: 246 NPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV-- 303
+ SF W P + ++ L E+ ++ + ++ + L ++ + +
Sbjct: 562 SGESFAADSWLENDGAPVEQWVAYARDGLLERGRA----VSVTVAGTRVLNLRGATALAA 617
Query: 304 --GCHRSDVIVGVLKRKDMIRLSCQLSD 329
GC +D+++ + DM C++ D
Sbjct: 618 IDGCGGADIVITNQEMGDMA--GCEVYD 643
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYS--IPKMIYSSESHNT 67
P P + + LSPPSGP PG FDF ++++G+ A+GY + + + S S
Sbjct: 152 PEPGQVVLM-TGHLSPPSGPVEPGGFDFQRMAWFEGLGAVGYTRTPVLLGAVASEGSAGL 210
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSA 94
W +++ +I + + + G + +A
Sbjct: 211 WVYRQRVAISRGVQDRLEGESGAFAAA 237
>gi|254420656|ref|ZP_05034380.1| Competence protein [Brevundimonas sp. BAL3]
gi|196186833|gb|EDX81809.1| Competence protein [Brevundimonas sp. BAL3]
Length = 698
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 5/133 (3%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F ++HF+ +YGL+AN+ P+ FV++PA + L L L V WG+D+++
Sbjct: 421 FAMQHFNRTAMYGLLANLGTAPVADFVLMPALALGAALEPLGLGGPFLAVAGWGVDLMLA 480
Query: 159 I-AHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
I A + + P+ + L + + +R +G + ++ +P
Sbjct: 481 IGAWTAGLPGAVQTVASAPDYVLPMAFLGVLFVCLWQGRLRWLGLPLAAAVLV----WPR 536
Query: 218 SFSPDLLISEKGN 230
+ +PDL I + G
Sbjct: 537 APTPDLWIGDGGT 549
>gi|42520961|ref|NP_966876.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42410702|gb|AAS14810.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 720
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 111/251 (44%), Gaps = 24/251 (9%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
+ I +F+ + G+I N++AIPI++ ++IP G+I +LL+ L ++ I + +D I++
Sbjct: 457 YTIYNFNYFSISGIITNLVAIPIVTLIIIPLGIIYVLLIPLGVEWIIAPFIERPIDSILY 516
Query: 159 IAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
I + I S+ + I P +S + I L + + N R G I + I F+
Sbjct: 517 ITNAIASLQYLVIPIRTFPASSIIIITFGLLWLCLWERNWRFFGIFFIVLGI---FSSAM 573
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEK 277
+PD+LI+ N+ A N L S +F+ W ++
Sbjct: 574 YRTPDILINA-DNVAAKESDNLLYSLTRKNRNFVVKTWA------------------KQN 614
Query: 278 NQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRD 337
Q+ + + K L C+ ++ +V + +K+ I +C D+ I + +
Sbjct: 615 GQNQILNHKKYNNSDKRLKCNDYGCIYNKGNNKLVLLAYKKEDISENCDKVDLTI-QLSE 673
Query: 338 INTKLCNVSLL 348
+ CNV ++
Sbjct: 674 FDYSACNVKII 684
>gi|58697018|ref|ZP_00372488.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Drosophila
simulans]
gi|58536723|gb|EAL59993.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Drosophila
simulans]
Length = 724
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 5/158 (3%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
+ I +F+ + G+I N++AIPI++ ++IP G+I +LL+ L ++ I + ++ I++
Sbjct: 464 YTIYNFNYFSISGIITNLVAIPIVTLIIIPLGIIYVLLIPLGIEWIIAPFIERPINSILY 523
Query: 159 IAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
I + I S+ + I P +S + I L + + N R +G I + I F+ Y
Sbjct: 524 ITNAIASLQYLVIPIRTFPASSIIIITFGLLWLCLWERNWRFLGFFFIVLG--ICFSAAY 581
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
+PD+LI+ N+ A N L S +F+ W
Sbjct: 582 K-TPDILINA-DNVAAKESDNLLYSLTRKSRNFVIKTW 617
>gi|85708727|ref|ZP_01039793.1| predicted membrane metal-binding protein [Erythrobacter sp. NAP1]
gi|85690261|gb|EAQ30264.1| predicted membrane metal-binding protein [Erythrobacter sp. NAP1]
Length = 761
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 18/144 (12%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW-----GLDIII 157
HFH VYG AN+LAIP+++F+ +P ++ L+ D + G W L++++
Sbjct: 488 HFHRAGVYGAFANVLAIPLVTFISMP-----LIAFALAFDLVGLGAPFWWLVERSLNLLL 542
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTI---VVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
IAH A + +P+ S TI V L + R +G + + +L
Sbjct: 543 SIAH--ITASQPGAVKLMPQMSGATIALFVGGGLWLALWSGKARLLGFVPAALATTLLMA 600
Query: 215 FPYSFSPDLLISEKGNLVALVDKN 238
P PD+LI +G V + +N
Sbjct: 601 TPI---PDVLIGREGRHVGITIEN 621
>gi|254475818|ref|ZP_05089204.1| competence protein [Ruegeria sp. R11]
gi|214030061|gb|EEB70896.1| competence protein [Ruegeria sp. R11]
Length = 689
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 78/158 (49%), Gaps = 4/158 (2%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F HF+ + +GL+AN+LA+P++ +V+P+ ++A+ L + I M G+ I+
Sbjct: 414 FAAAHFNQLSQFGLLANVLAVPVMGLLVVPSAVLALCLAPIGGGWIGLWGMDLGIRWILW 473
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVV-EFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+A ++ +P S + ++ +++ + +R G+I I ++I +
Sbjct: 474 VAGWVAGMDGAVRPVEMPPPSVLGLIAFGGIMLAVWRGPLRWSGTIAICGGLLI---WAQ 530
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
+ P +LIS +G LV ++ + + S F S+W
Sbjct: 531 AGRPVVLISPEGGLVGVMTEQGRALSRSRGQGFAASRW 568
>gi|225630830|ref|YP_002727621.1| ComEC/Rec2 family protein [Wolbachia sp. wRi]
gi|225592811|gb|ACN95830.1| ComEC/Rec2 family protein [Wolbachia sp. wRi]
Length = 717
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 5/158 (3%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
+ I +F+ + G+I N++AIPI++ ++IP G+I +LL+ L ++ I + ++ I++
Sbjct: 457 YTIYNFNYFSISGIITNLVAIPIVTLIIIPLGIIYVLLIPLGIEWIIAPFIERPINSILY 516
Query: 159 IAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
I + I S+ + I P +S + I L + + N R +G I + I F+ Y
Sbjct: 517 ITNAIASLQYLVIPIRTFPASSIIIITFGLLWLCLWERNWRFLGFFFIVLG--ICFSAAY 574
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
+PD+LI+ N+ A N L S +F+ W
Sbjct: 575 K-TPDILINA-DNVAAKESDNLLYSLTRKSRNFVIKTW 610
>gi|58698439|ref|ZP_00373348.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58535031|gb|EAL59121.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 729
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 5/158 (3%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
+ I +F+ + G+I N++AIPI++ ++IP G+I +LL+ L ++ I + ++ I++
Sbjct: 490 YTIYNFNYFSISGIITNLVAIPIVTLIIIPLGIIYVLLIPLGIEWIIAPFIERPINSILY 549
Query: 159 IAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
I + I S+ + I P +S + I L + + N R +G I + I F+ Y
Sbjct: 550 ITNAIASLQYLVIPIRTFPASSIIIITFGLLWLCLWERNWRFLGFFFIVLG--ICFSAAY 607
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
+PD+LI+ N+ A N L S +F+ W
Sbjct: 608 K-TPDILINA-DNVAAKESDNLLYSLTRKSRNFVIKTW 643
>gi|103486321|ref|YP_615882.1| ComEC/Rec2-related protein [Sphingopyxis alaskensis RB2256]
gi|98976398|gb|ABF52549.1| ComEC/Rec2-related protein [Sphingopyxis alaskensis RB2256]
Length = 719
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW-----GLDIII 157
HFH +YG +AN++AIP+ +FVV+PA +A+L D++ G W L ++I
Sbjct: 435 HFHKAGLYGALANVIAIPLTTFVVMPAEALALL-----FDSVGLGAPFWWVAEQALRLLI 489
Query: 158 HIAHRISVAHNEF-CIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+AH ++ A + P F + L ++ +T R G I + +L P
Sbjct: 490 ALAHSVAGAPGAVTTLPSFPPWGFGLTLFGGLWILLWQTRWRRWGMIPLAAGAAVLLAQP 549
Query: 217 YSFSPDLLISEKGNLVAL 234
PDLL++ G +A+
Sbjct: 550 ---RPDLLVTGDGRHIAV 564
>gi|167646747|ref|YP_001684410.1| ComEC/Rec2-like protein [Caulobacter sp. K31]
gi|167349177|gb|ABZ71912.1| ComEC/Rec2-related protein [Caulobacter sp. K31]
Length = 726
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 5/137 (3%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F ++HF+ + V+GL AN+ P+ SFV++P I L L + WG+ ++
Sbjct: 455 FAMQHFNRVAVWGLPANLAVAPLSSFVIMPFLAIGAALEPFGLGGPFLAIAGWGIGAMMW 514
Query: 159 IAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
IA + A + + P + V +L+ + +R +G+ + + + +P
Sbjct: 515 IADGFASAGGAQRLVASGPPFTLALAFVGLMLLCLWRGRLRWLGAPL----ALAVALWPR 570
Query: 218 SFSPDLLISEKGNLVAL 234
+ PD+ I+ G+ A+
Sbjct: 571 AAPPDVWIAPDGSTAAV 587
>gi|149914773|ref|ZP_01903303.1| N-acetyl-gamma-glutamyl-phosphate reductase [Roseobacter sp.
AzwK-3b]
gi|149811566|gb|EDM71401.1| N-acetyl-gamma-glutamyl-phosphate reductase [Roseobacter sp.
AzwK-3b]
Length = 680
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
HF+ +GLIAN++++P++ +V+PA ++A LM L+ + VM GLD I+ +AH
Sbjct: 417 AHFNQFAHFGLIANLMSVPLMGVMVMPAAVVAACLMPFGLEWLALWVMGLGLDWILWVAH 476
Query: 162 RISVAHNEFCIGRIPETSFVTI---VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
VA G + + + V L ++ + R G + ++ ++ +
Sbjct: 477 --WVAGWPGARGTVVSPGPLVLPLMAVGVLFVMLWRGWGRLAGLAPVLVSGVLWLG---A 531
Query: 219 FSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
P +LI++ G LV ++ + FI W
Sbjct: 532 ERPQVLIADSGALVGVMTPEGRALSREKGAGFIAQNW 568
>gi|304322091|ref|YP_003855734.1| competence protein [Parvularcula bermudensis HTCC2503]
gi|303300993|gb|ADM10592.1| competence protein [Parvularcula bermudensis HTCC2503]
Length = 719
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 107/239 (44%), Gaps = 13/239 (5%)
Query: 101 IKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIA 160
I HF+ + YGL+AN++ +PI S +++P ++ + LM D + + + +GL+ I+ IA
Sbjct: 451 IYHFNQVAAYGLLANLIVMPIFSLLIMPGLVLGLALMPFGADGLVWPITGFGLEAILSIA 510
Query: 161 HRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
I+ + + P +F T++ L + + R G + + L +
Sbjct: 511 TWIAGWEGAVIAVAQWPPWAFATVLAGGLALCLLRAAWRWGGLGL---IALGLAGAASAV 567
Query: 220 SPDLLISEKGNLVALVDKNTLISNYSNPPS-FIFSQWKSALITPFHEAPHVQKEDLQEKN 278
P +I++ +A+ D++ ++ S + F QW++ P A +++ D
Sbjct: 568 PPIAMIADGAGNLAIRDEDGEVAVLSRRRARFSLDQWRAVYGLPKGTA--LRRLDCPPAA 625
Query: 279 QSSLKEILRSMQPRKFLCIK-KSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIR 336
+LR+ PR L ++ C D+++ L R + I C +L+T R
Sbjct: 626 PIC---VLRTAGPRISLVRSLEAAGQACRTDDIVILPLWRTERITDGCD--AVLLTAAR 679
>gi|307942168|ref|ZP_07657519.1| competence protein [Roseibium sp. TrichSKD4]
gi|307774454|gb|EFO33664.1| competence protein [Roseibium sp. TrichSKD4]
Length = 708
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 12/138 (8%)
Query: 15 TTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT--WKK 72
+TI ARL PP+GPA PG +DF+F +Y++ I A G+ + P + + S + +
Sbjct: 144 STISVRARLFPPAGPAVPGGYDFSFIAYFQKIGASGFAFGKPDEVSGAASRGRVSEFMRV 203
Query: 73 ISSIKQSFLNEIRANIGT--YGSASASIFLIKHFH-------CIPVYGLIANILAIPILS 123
++ ++ S + T G+ A++ + H + GL A+ILAI L
Sbjct: 204 LAGVRASLSERLLKFTQTPDAGALVAALLVGNRDHISDETEDVLRQAGL-AHILAISGLH 262
Query: 124 FVVIPAGLIAILLMILSL 141
+ G ++L+M+L+L
Sbjct: 263 MALFAGGAFSLLVMLLAL 280
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 114/288 (39%), Gaps = 29/288 (10%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HF I YGL+ NIL +PI S V +P GL+A+LL+ L + P VM L +I+ +A
Sbjct: 430 HFGRIAPYGLVGNILGMPIFSLVTMPMGLLALLLLPFGLASFPVTVMEASLSLILEMAR- 488
Query: 163 ISVAHNEFCIGRI---PETSFVTIVVEFLLMVFCKTNIRHIGSIM---IGITIIILFTFP 216
A+ + G + P S + + + +R I + + +G + +L
Sbjct: 489 -FTANLDAGRGHVVPPPAASAFLLFCGLFGGLVLRGRLR-IAAFLPAFLGSALWLL---- 542
Query: 217 YSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQE 276
S PD+ IS G +A D + + S F W +Q+E +
Sbjct: 543 -SNGPDIQISATGLHLAARDADGVFRLTSTRQGFRNEMW-------------LQREGMDV 588
Query: 277 KNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIR 336
S L + C+ +F V + +IV + + C +D++IT
Sbjct: 589 STLSELPMADDQKRCDDEGCVVHAFPVNGLANPLIVALPRTVSAAIQDCSRADLVITDF- 647
Query: 337 DINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIEN 384
D++ C L + Q G++ I + D + IEN
Sbjct: 648 DMSGANCTAQLFDRSKRAQT-GAVSIWLSSMRTDEEMQARTGIERIEN 694
>gi|261219493|ref|ZP_05933774.1| DNA uptake protein [Brucella ceti M13/05/1]
gi|261321988|ref|ZP_05961185.1| DNA uptake protein [Brucella ceti M644/93/1]
gi|260924582|gb|EEX91150.1| DNA uptake protein [Brucella ceti M13/05/1]
gi|261294678|gb|EEX98174.1| DNA uptake protein [Brucella ceti M644/93/1]
Length = 535
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 12 PAETTI----EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
PA T I G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 207 PASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTI 258
Score = 43.1 bits (100), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRA-NIGTYGSA-----SASIFLIKHFHCIPVYGLI 113
+S + ++ + ++ FL + A + T G++ ++ IF HF+ GL+
Sbjct: 447 WSERNARKFSRAGRKAAERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLV 506
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLD 142
N+LA+P +S +V+P G+ ++LM L LD
Sbjct: 507 GNVLALPAISILVMPFGVFGLVLMPLQLD 535
>gi|46201588|ref|ZP_00208160.1| COG0658: Predicted membrane metal-binding protein [Magnetospirillum
magnetotacticum MS-1]
Length = 710
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 97/211 (45%), Gaps = 13/211 (6%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
F +F++ I+A Y P+ +H W +++I + + G A
Sbjct: 364 FQMSFAAVVAMIAA--YESLTPRQTQWRAAHPGW----LAAIGLYVFGTVVTTL-IAGFA 416
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
+A ++ I HF+ V+ + AN++A+P+ F V+P L+ LL+ L+ + M WG++
Sbjct: 417 TA-VYGIYHFNRFAVWSVAANMIAVPLTGFWVMPWALVMFLLLPFGLEALALVPMGWGVE 475
Query: 155 IIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
+ +A + S + + +P + V + + + R G + + + L
Sbjct: 476 GVNWVAVWVASWPSSAVTLPILPLWAMVVFTLGGCWLCLWRGRWRWWGLVPM---MAALA 532
Query: 214 TFPYSFSPDLLISEKGNLVALVDKN-TLISN 243
+ ++ PDLL+ +G+ +A+ + TL+ N
Sbjct: 533 SMAFARPPDLLVDGRGDGMAVRSADGTLLLN 563
>gi|225629731|ref|ZP_03787690.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225591415|gb|EEH12496.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 522
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 5/158 (3%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
+ I +F+ + G+I N++AIPI++ ++IP G+I +LL+ ++ I ++ +D I++
Sbjct: 317 YTIYNFNYFSISGIITNLVAIPIVTLIIIPLGIIYVLLIPFGIEWIIAPLIERPIDSILY 376
Query: 159 IAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
I + I S+ + I P +S + I + L + + N R G + I + I F+ Y
Sbjct: 377 ITNAIASLQYLVIPIRTFPASSIIIITLGLLWLCLWERNWRFFG--IFFIVLGICFSTAY 434
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
+PD+LI+ N+ N L S +F+ W
Sbjct: 435 K-TPDILINA-DNVAVKESDNLLYSLTRKNRNFVVKTW 470
>gi|261222312|ref|ZP_05936593.1| DNA uptake protein [Brucella ceti B1/94]
gi|265998275|ref|ZP_06110832.1| DNA uptake protein [Brucella ceti M490/95/1]
gi|260920896|gb|EEX87549.1| DNA uptake protein [Brucella ceti B1/94]
gi|262552743|gb|EEZ08733.1| DNA uptake protein [Brucella ceti M490/95/1]
Length = 616
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 12 PAETTI----EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
PA T I G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 207 PASTAIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTI 258
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRA-NIGTYGSA-----SASIFLIKHFHCIPVYGLI 113
+S + ++ + ++ FL + A + T G++ ++ IF HF+ GL+
Sbjct: 447 WSERNARKFSRAGRKAAERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNNTAPLGLV 506
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
N+LA+P +S +V+P G+ ++LM L LD +P VM G
Sbjct: 507 GNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQVMGVG 545
>gi|329114370|ref|ZP_08243132.1| ComE operon protein 3 [Acetobacter pomorum DM001]
gi|326696446|gb|EGE48125.1| ComE operon protein 3 [Acetobacter pomorum DM001]
Length = 748
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 101 IKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIA 160
+ HF I + ++AN++A+P+++ ++P GLIA+ M L +D + +M G+ II +A
Sbjct: 459 MAHFGVIQPFFVVANMVAVPLMAVWIMPLGLIALAFMPLHMDVLFLWLMGVGIRPIIWLA 518
Query: 161 HRISVAH---NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
H VAH + +P + +++ + + R G +++ P+
Sbjct: 519 H--MVAHWPAARVVVPHMPGWGLLAVMLGLCWICLWRQRWRWAGC----AGLVLGMVSPW 572
Query: 218 SF-SPDLLISEKGNLVALVDKNTL-ISNYSNPPSFIFSQWKSALITP 262
PD++IS G LV + + + + + S + W P
Sbjct: 573 LLVQPDVIISPDGGLVGVRESDKIYVMGQSRAARPVMQAWGQYFAQP 619
>gi|296283864|ref|ZP_06861862.1| ComEC/Rec2-related protein [Citromicrobium bathyomarinum JL354]
Length = 753
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 99/227 (43%), Gaps = 29/227 (12%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HFH +YG +AN++ IP+++FV +P +A+L ++ + + LD+++ IAH
Sbjct: 472 HFHRTGMYGALANMVGIPLVTFVSMPLIALALLADLVGAGAPVWWLAGASLDLLLGIAHL 531
Query: 163 ISVAHNEFCIG-RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ + + +F V L + R G + + I I++ + + P
Sbjct: 532 TASQPGAVKLAPHMGGLAFGLFVAGGLWIALWSGRGRFWGFVPVLIATILMLS---TSRP 588
Query: 222 DLLISEKGNLVALVDKNTLI------SNYS----------NPPSFIFSQWKSALITPFHE 265
D+L+S G VA+++ L+ S+Y+ + P SQW A +
Sbjct: 589 DVLVSRDGRDVAIIEGGRLMSLRDSQSSYASDTLAELGALDEPPLPLSQWPGARCSAEFC 648
Query: 266 APHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIV 312
+++E + + L + R+++ ++ C R D++V
Sbjct: 649 VATIEREGRRYR--------LLLARGREYVT-ERDLAAACARVDIVV 686
>gi|94496456|ref|ZP_01303033.1| ComEC/Rec2-related protein [Sphingomonas sp. SKA58]
gi|94424202|gb|EAT09226.1| ComEC/Rec2-related protein [Sphingomonas sp. SKA58]
Length = 695
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 38 NFSSYYKGISAIGYFYSIPKM-IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+F + ++AI P+ +++ W+WK ++ + + + A
Sbjct: 357 SFQMSFAAVTAIVALAEHPRFRAFAAAREENWSWKLTRALAVTLATGLVVELVLMPIA-- 414
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ HFH + G AN++AIP+ +FVV+P ++A+L ++ L + + LD++
Sbjct: 415 ----LFHFHKAGLLGAFANLIAIPLTTFVVMPLEVLALLFDLVGLGAPFWWLTGHALDLL 470
Query: 157 IHIAHRISVAHNEFCIGRIPETS---FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
+ +AH VA + P F ++V L + +T R +G + ++ +
Sbjct: 471 LAVAH--GVAASPLATLLAPAMRPVLFALVIVGLLWCLLWRTRWRWLG---LPPVLVGVA 525
Query: 214 TFPYSFSPDLLISEKGNLVAL 234
+ PDLL++ G VA+
Sbjct: 526 LVLVAAPPDLLVTGDGRHVAV 546
>gi|258541858|ref|YP_003187291.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-01]
gi|256632936|dbj|BAH98911.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-01]
gi|256635993|dbj|BAI01962.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-03]
gi|256639048|dbj|BAI05010.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-07]
gi|256642102|dbj|BAI08057.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-22]
gi|256645157|dbj|BAI11105.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-26]
gi|256648212|dbj|BAI14153.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-32]
gi|256651265|dbj|BAI17199.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256654256|dbj|BAI20183.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-12]
Length = 732
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 11/172 (6%)
Query: 101 IKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIA 160
+ HF I + ++AN++A+P+++ ++P GL+A+ M L +D +M G+ +I +A
Sbjct: 443 MAHFGVIQPFFVVANMVAVPLMAVWIMPLGLLAVGFMPLHMDAPFLWLMGAGIRPVIWLA 502
Query: 161 HRISVAH---NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
H VAH + +P + +++ + + + R +G +++ P+
Sbjct: 503 H--IVAHWPAARVAVPHMPGWGLLAVMLGLNWICLWRQHWRWVGC----AGLVLGMASPW 556
Query: 218 SF-SPDLLISEKGNLVALVDKNTL-ISNYSNPPSFIFSQWKSALITPFHEAP 267
PD++IS G LV + D + + S I W P P
Sbjct: 557 LLVQPDVVISPDGGLVGVRDSGKVYVIGQSRAQRPIMQAWGQYFAQPVEVFP 608
>gi|240141532|ref|YP_002966012.1| hypothetical protein MexAM1_META1p5131 [Methylobacterium extorquens
AM1]
gi|240011509|gb|ACS42735.1| conserved membrane hypothetical protein; ComEC/Rec2 family domain
[Methylobacterium extorquens AM1]
Length = 752
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 91/226 (40%), Gaps = 19/226 (8%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG----LD 154
F HF + +GL+ N L +P++S V+PA ++ +L +LD + +M LD
Sbjct: 456 FATYHFQTVQPFGLVGNALTLPLVSLAVMPAAVLGMLAYPFALDRPVWWLMGLAVRGMLD 515
Query: 155 IIIHIA--HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
I IA + +V F G + + + LL + +R + + G+ I L
Sbjct: 516 ISAWIAGFGQANVVLPAFGTG-----ALMLLAAALLLATLPVSRLRLLALVPAGLG-IAL 569
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
P + D+ I G A+ K+ + PP F+ QW L P
Sbjct: 570 AASPIRY--DIYIDRDGAGAAVRGKDGRLVVLGRPPGFVLEQW---LKADGDGRPPEAAT 624
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCI--KKSFCVGCHRSDVIVGVLK 316
+ L +M R + K++F C R+D+++ L+
Sbjct: 625 GAAGPRCDRIGCTLTAMDGRAVALVMDKRAFAEDCARADILITRLR 670
>gi|158423824|ref|YP_001525116.1| ComEC/Rec2-related protein [Azorhizobium caulinodans ORS 571]
gi|158330713|dbj|BAF88198.1| ComEC/Rec2-related protein [Azorhizobium caulinodans ORS 571]
Length = 949
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/263 (19%), Positives = 106/263 (40%), Gaps = 27/263 (10%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HF + + GL++N+ A+P + F+V+P GL+ +LL+ D I + VM G+DI++ ++
Sbjct: 472 HFQRLGIMGLLSNLAAMPAVEFLVMPFGLLGVLLLPFGWDFIAWPVMGLGIDIMVKVSDV 531
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
++ R T L ++ + + + L PD
Sbjct: 532 VAALPGADM--RTDWVGAGTAAFATLALLALCLLRGLLRLAAVPCVVAALLLLGAPPRPD 589
Query: 223 LLISEKGNLVALVDKNTLIS-NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSS 281
+LI+ G VA+ + +S + + QW S ++ D +
Sbjct: 590 VLIAANGQTVAVRGGDGRLSIAGARSSRLVAEQWLS------------KEADPRTAEVPD 637
Query: 282 LKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITT--IRDIN 339
L + F C + C+ + ++++ + + +C + +++T N
Sbjct: 638 LAQ--------GFACDARR-CMAPLPDGTKIVLVRKAEALPAACGEASLVVTAEVASTEN 688
Query: 340 TKLCNVSLLITPEILQKQGSLEI 362
C + L TP+ + + G+L +
Sbjct: 689 ISAC-AARLFTPQDMSRTGTLAL 710
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ + P A T + +ARL PP A PG +DF + +++GI A+G+ P++I
Sbjct: 182 LSVARGSAPA-AGTPVSVLARLLPPMEAALPGGYDFGRNIWFRGIDAVGFGLGRPRIIAL 240
Query: 62 SESH--NTWTWKKISSIKQSFLNEIRA 86
+E + + + ++Q+ IRA
Sbjct: 241 AEPAPFSVRVGRLVDEVRQAVGARIRA 267
>gi|218670731|ref|ZP_03520402.1| hypothetical protein RetlG_03303 [Rhizobium etli GR56]
Length = 236
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 4 ITKKYD-PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGI 46
I + D PF I G ARL+PP+GPA PGL DF+F +Y+ GI
Sbjct: 193 IARGADAPFEIGDVITGRARLTPPAGPALPGLNDFSFGAYFDGI 236
>gi|209964502|ref|YP_002297417.1| ComEC [Rhodospirillum centenum SW]
gi|209957968|gb|ACI98604.1| ComEC [Rhodospirillum centenum SW]
Length = 726
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F + HF YGL+AN+LA+P+ SF V+P GL+ LM L+ M G+ I+
Sbjct: 462 FGLYHFQQGANYGLLANLLAVPVTSFWVMPWGLVVYGLMPFGLEGWAVDAMGLGVQAILW 521
Query: 159 IAHRIS 164
AH ++
Sbjct: 522 TAHAVA 527
>gi|68171732|ref|ZP_00545084.1| ComEC/Rec2-related protein [Ehrlichia chaffeensis str. Sapulpa]
gi|88657575|ref|YP_507253.1| ComEC/Rec2-related protein [Ehrlichia chaffeensis str. Arkansas]
gi|67998843|gb|EAM85543.1| ComEC/Rec2-related protein [Ehrlichia chaffeensis str. Sapulpa]
gi|88599032|gb|ABD44501.1| ComEC/Rec2-related protein [Ehrlichia chaffeensis str. Arkansas]
Length = 674
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 82/159 (51%), Gaps = 5/159 (3%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
+++ HF+ + G+ AN+LAIPI +F ++P GL+ I+L I++L+ ++ ++++I+
Sbjct: 416 YVVYHFNYFSIAGVFANLLAIPITTFFIMPLGLLYIVLGIVNLEFCVSWMLESTVNLLIY 475
Query: 159 IAHRISVAHNEFCI-GRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
I I+ + S + I + FL + K N+R G I++ I+ F
Sbjct: 476 IVKYIAKIDGLVVLFHAFSSVSILIITLGFLFLCLWKGNMRFCGLILV---ILGFFVGIS 532
Query: 218 SFSPDLLISEKGNLV-ALVDKNTLISNYSNPPSFIFSQW 255
+PD++ ++ +V L K I+ ++ SFI W
Sbjct: 533 YVTPDIMFNQHNIVVKELNGKLYAINQKAHLTSFINLTW 571
>gi|163854078|ref|YP_001642121.1| ComEC/Rec2-related protein [Methylobacterium extorquens PA1]
gi|163665683|gb|ABY33050.1| ComEC/Rec2-related protein [Methylobacterium extorquens PA1]
Length = 752
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 103/256 (40%), Gaps = 24/256 (9%)
Query: 74 SSIKQSFLNEIRANIGTYGSA-----SASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
S I +S +A +GT + + + F HF + +GL+ N L +P++S V+P
Sbjct: 426 SRIARSAFWVAKAVVGTLATTLVAQLATAPFATYHFQTVQPFGLVGNALTLPLVSLAVMP 485
Query: 129 AGLIAILLMILSLDNIPFGVMAWG----LDIIIHIA--HRISVAHNEFCIGRIPETSFVT 182
A ++ +L +LD + +M LDI IA + +V F G + +
Sbjct: 486 AAVLGMLAYPFALDRPVWWLMGLAVRGMLDISAWIAGFGQANVVLPAFGTG-----ALML 540
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+ LL + +R + + G+ + L P + D+ I G A+ K+ +
Sbjct: 541 LAAALLLATLPVSRLRFLALVPAGLG-VALAASPIRY--DIYIDRDGAGAAVRGKDGRLV 597
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCI--KKS 300
PP F+ QW L P + L ++ R + K++
Sbjct: 598 VLGRPPGFVLEQW---LKADGDGRPPEAATGAAGPRCDRIGCTLTAVDGRAVALVMDKRA 654
Query: 301 FCVGCHRSDVIVGVLK 316
F C R+D+++ L+
Sbjct: 655 FAEDCARADILITRLR 670
>gi|294677884|ref|YP_003578499.1| competence protein [Rhodobacter capsulatus SB 1003]
gi|294476704|gb|ADE86092.1| competence protein [Rhodobacter capsulatus SB 1003]
Length = 717
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G A+A I HF + YG++AN+LA+P++ VV+PAG++A +L L L +M
Sbjct: 428 GLATAPI-AAAHFGRMSQYGMLANLLAVPVMGIVVMPAGVLAAVLAPLGLAGPALWLMGL 486
Query: 152 GLDIIIHIA 160
G D ++ +A
Sbjct: 487 GTDWVLAVA 495
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYS 54
A LSPP+ P PG +DF ++++ G+ A+GY S
Sbjct: 181 AHLSPPAEPIAPGAWDFRRNAWFSGLGALGYTRS 214
>gi|218533023|ref|YP_002423839.1| ComEC/Rec2-related protein [Methylobacterium chloromethanicum CM4]
gi|218525326|gb|ACK85911.1| ComEC/Rec2-related protein [Methylobacterium chloromethanicum CM4]
Length = 752
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 92/226 (40%), Gaps = 19/226 (8%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG----LD 154
F HF + +GL+ N L +P++S V+PA ++ +L +LD + +M LD
Sbjct: 456 FATYHFQTVQPFGLVGNALTLPLVSLAVMPAAVLGMLAYPFALDRPVWWLMGLAVRGMLD 515
Query: 155 IIIHIA--HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
I IA + +V F G + + + LL + +R + + G+ + L
Sbjct: 516 ISAWIAGFGQANVVLPAFGTG-----ALMLLAAALLLATLPVSRLRLLALVPAGLG-VAL 569
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
P + D+ I G A+ K+ + PPSF+ QW L P
Sbjct: 570 AASPIRY--DIYIDRDGAGAAVRGKDGRLVVLGRPPSFMLEQW---LKADGDGRPPEAAT 624
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCI--KKSFCVGCHRSDVIVGVLK 316
+ L ++ R + K++F C R+D+++ L+
Sbjct: 625 GAAGPRCDRIGCTLTAVDGRAVALVMDKRAFAEDCARADILITRLR 670
>gi|296447145|ref|ZP_06889076.1| ComEC/Rec2-related protein [Methylosinus trichosporium OB3b]
gi|296255310|gb|EFH02406.1| ComEC/Rec2-related protein [Methylosinus trichosporium OB3b]
Length = 743
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
SA+AS F+ +FH + Y LI N L + I+ F +PA L+ +L LD + + + +G
Sbjct: 457 SATAS-FMAGNFHELSPYVLIGNPLTLAIIEFFAVPAALLGAMLYPFGLDALVWSYLGFG 515
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRH--IGSIMIGITI 209
+D++ IA I A +P SF + FL L V R + + I
Sbjct: 516 IDLVTRIAGFIGAAPG----ASLPVRSFAPFALVFLSLAVLSAVLWRSWLLRASAIPFAA 571
Query: 210 IILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPP-SFIFSQW 255
I L+ D+ ++ G A+ + ++ SFI QW
Sbjct: 572 IGLYGAANGEGFDMAVAPSGEAAAVRRPSGELALLGRGKLSFIGEQW 618
>gi|294010831|ref|YP_003544291.1| ComEC/Rec2-related protein [Sphingobium japonicum UT26S]
gi|292674161|dbj|BAI95679.1| ComEC/Rec2-related protein [Sphingobium japonicum UT26S]
Length = 387
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HFH + G +AN++AIP+ + VV+P +A+L + + + A LD+++ +AH
Sbjct: 108 HFHKAGMLGSVANLVAIPLTTLVVMPLEAMALLFDLGGWGAPFWWLTARALDLLLLVAH- 166
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFC---KTNIRHIGSIMIGITIIILFTFPYSF 219
VA + + + P S + L M++C ++ R G + + + ++ P
Sbjct: 167 -GVASSPWAVVLAPAQSGAVFGLILLGMLWCLLWRSGWRWAGLMPVSACMTMILASPM-- 223
Query: 220 SPDLLISEKGNLVAL 234
P +LIS G VAL
Sbjct: 224 -PAILISGDGRHVAL 237
>gi|254454198|ref|ZP_05067635.1| ComEC/Rec2 family protein [Octadecabacter antarcticus 238]
gi|198268604|gb|EDY92874.1| ComEC/Rec2 family protein [Octadecabacter antarcticus 238]
Length = 430
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 116/242 (47%), Gaps = 22/242 (9%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F HF+ I GLIAN++++P++ +V+PA ++A +L L ++ + M GL I+
Sbjct: 150 FAAFHFNQIAQLGLIANLMSVPLMGTLVMPAAVLAAVLAPLGMEMVGLWAMDLGLRWILG 209
Query: 159 IAHRISVAHNEFCIGRI----PETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
+AH VA + + + PE I + + +V + +IR G + I+
Sbjct: 210 VAH--FVADQDGALRHVVTPGPEI-LALISLGGIFVVQWRGSIRWAG---VAPVILAFAL 263
Query: 215 FPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDL 274
+ + P LLI+E G+L+ ++ + + + + +F W P + +++
Sbjct: 264 WHLAQRPALLIAESGSLIGVMTETGRVVSKESVEAFAAESWLENDGAPVAQWVAYERDGF 323
Query: 275 QEKNQSSLKEILRSMQPRKFLCIKKSFCV----GCHRSDVIVGVLKRKDMIRLS-CQLSD 329
E+ ++ + ++ + L ++ + + GC +D+ V+ ++M L+ C++ D
Sbjct: 324 LEQGRT----VSVTVAGTRVLNLRGATALAAIEGCGGADI---VITNQEMRALAGCEVYD 376
Query: 330 IL 331
I+
Sbjct: 377 IV 378
>gi|58617330|ref|YP_196529.1| putative competence locus E protein 3 [Ehrlichia ruminantium str.
Gardel]
gi|58416942|emb|CAI28055.1| Similar to competence locus E protein 3 [Ehrlichia ruminantium str.
Gardel]
Length = 673
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
++I HFH + G+ N+LAIPI +F +IP L+ ++L ++L+ + + ++++
Sbjct: 413 YVIYHFHNFSIIGVFVNVLAIPITTFFIIPLSLLYVVLSFVNLEFYISYALESSVKLLLY 472
Query: 159 IAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
I++ +S + + S + I + FL + ++R +G ++I + I F +
Sbjct: 473 ISNYVSKIDSLILSFHAVSSVSILVITLGFLFLCLWNGSLRFLGLVVIVCGLFIGFQYV- 531
Query: 218 SFSPDLLIS-------EKGNLVALVDKNTLISNY 244
+PD+L++ E + V+KN I+ +
Sbjct: 532 --TPDILVNINNIAVKESDGQLYSVNKNAHITGF 563
>gi|332185896|ref|ZP_08387643.1| comEC/Rec2-related domain protein [Sphingomonas sp. S17]
gi|332014254|gb|EGI56312.1| comEC/Rec2-related domain protein [Sphingomonas sp. S17]
Length = 702
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 14/204 (6%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L +F + I+AI + P M +H W W S ++Q + G
Sbjct: 371 LMGASFQLSFAAITAIIALHEHPVMRRWFGAHPDWRW---SIVRQGGALLV---TGLVVE 424
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
A+ I HFH +YG ANI+AIP +F+ +P ++A+L L L + ++ W L
Sbjct: 425 AALMPIAIFHFHKAGLYGAFANIVAIPWTTFIAMPIEMLALLFEPLGLAGPLWHLLGWAL 484
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETS---FVTIVVEFLLMVFCKTNIRHIGSIMIGITII 210
++ +AH ++ +P S F T V L + +T R +G +I + +
Sbjct: 485 GALLALAHYVAALPGAAIA--LPVASCWAFATAVGGGLWLALWRTRARWMGVPLILMGSV 542
Query: 211 ILFTFPYSFSPDLLISEKGNLVAL 234
+ P SPDL+++ G A+
Sbjct: 543 EMLMAP---SPDLIVTGDGRHAAI 563
>gi|222475345|ref|YP_002563762.1| hypothetical protein AMF_669 [Anaplasma marginale str. Florida]
gi|255003327|ref|ZP_05278291.1| hypothetical protein AmarPR_03661 [Anaplasma marginale str. Puerto
Rico]
gi|222419483|gb|ACM49506.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 748
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 37/255 (14%)
Query: 89 GTYGSASASI----FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
T GS ASI +++ HF+ V G+++NI+AIP+ +FVVIP GL+ ++ L +
Sbjct: 416 ATSGSLIASIATAPYVVYHFNYFSVVGVVSNIIAIPLTAFVVIPLGLVYVITDCLLSGAL 475
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEF---CIGRIPETSFVTIVVEFLLMVFCKTNIRHIG 201
+ + +I++IAH A E+ + IP S + + + L + + R I
Sbjct: 476 VASPLEASVGLILYIAHY--AAKVEWLAPTVRSIPPASVLFMTLGLLAFSWWRGTARIIL 533
Query: 202 SIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS-NYSNPPSFIFSQWKSALI 260
++ ++ +L Y +PD+L G V D + + F +S W
Sbjct: 534 GLLFALSGFLL-ALAYK-TPDVLYGVGGVAVKEGDGQLYFAMRRGSTRGFSYSAWA---- 587
Query: 261 TPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGC-HRSDVIVGVLKRKD 319
+E Q + Q +K +C+ GC + S VI+ +
Sbjct: 588 --------------RENGQPKIINGGYFGQGKKLICMAG----GCIYDSRVIISC--DTE 627
Query: 320 MIRLSCQLSDILITT 334
I C +D++I T
Sbjct: 628 FILQRCSEADLVIHT 642
>gi|254508533|ref|ZP_05120651.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
parahaemolyticus 16]
gi|219548558|gb|EED25565.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
parahaemolyticus 16]
Length = 721
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 90/205 (43%), Gaps = 21/205 (10%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHR 162
F I + + N++ +P SFVV+PA IA ++ + +D +G++ W L ++ +A
Sbjct: 353 FGGISISAIGYNLVFVPWFSFVVMPATFIAAVVSLFGYVDATIWGMVDWALSVV--VASS 410
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
+ F + + VTI++ +F + G ++ +T +L T + PD
Sbjct: 411 AWAGDSWFSL----SSQEVTILIVLACFIFMLPWLTRFGIVLFALT-FVLVTVSWRPKPD 465
Query: 223 -----LLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDL--- 274
L + ++A+ + L+ Y ++ S + LITP EA ++ D+
Sbjct: 466 WQLNILDVGHGLAILAVQGERALL--YDTGAAWQQSNYAEQLITPLMEAKGIEVLDIVVL 523
Query: 275 ---QEKNQSSLKEILRSMQPRKFLC 296
+ + EIL+ QP + +
Sbjct: 524 SHFDNDHAGGIGEILQRWQPERVIA 548
>gi|56416977|ref|YP_154051.1| hypothetical protein AM884 [Anaplasma marginale str. St. Maries]
gi|56388209|gb|AAV86796.1| hypothetical protein AM884 [Anaplasma marginale str. St. Maries]
Length = 748
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 37/255 (14%)
Query: 89 GTYGSASASI----FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
T GS ASI +++ HF+ V G+++NI+AIP+ +FVVIP GL+ ++ L +
Sbjct: 416 ATSGSLIASIATAPYVVYHFNYFSVVGVVSNIIAIPLTAFVVIPLGLVYVITDCLLSGAL 475
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEF---CIGRIPETSFVTIVVEFLLMVFCKTNIRHIG 201
+ + +I++IAH A E+ + IP S + + + L + + R I
Sbjct: 476 VASPLEASVGLILYIAHY--AAKVEWLAPTVRSIPPASVLFMTLGLLAFSWWRGTARIIL 533
Query: 202 SIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS-NYSNPPSFIFSQWKSALI 260
++ ++ +L Y +PD+L G V D + + F +S W
Sbjct: 534 GLLFALSGFLL-ALAYK-TPDVLYGVGGVAVKEGDGQLYFAMRRGSTRGFSYSAWA---- 587
Query: 261 TPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGC-HRSDVIVGVLKRKD 319
+E Q + Q +K +C+ GC + S VI+ +
Sbjct: 588 --------------RENGQPKIINGGYFGQGKKLICMAG----GCIYDSRVIISC--DTE 627
Query: 320 MIRLSCQLSDILITT 334
I C +D++I T
Sbjct: 628 FILQRCSEADLVIHT 642
>gi|254995154|ref|ZP_05277344.1| hypothetical protein AmarM_04131 [Anaplasma marginale str.
Mississippi]
Length = 748
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 109/258 (42%), Gaps = 43/258 (16%)
Query: 89 GTYGSASASI----FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
T GS ASI +++ HF+ V G+++NI+AIP+ +FVVIP GL+ ++ L +
Sbjct: 416 ATSGSLIASIATAPYVVYHFNYFSVVGVVSNIIAIPLTAFVVIPLGLVYVITDCLLSGAL 475
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEF---CIGRIPETSFVTIVVEFLLMVFCKTNIRHIG 201
+ + +I++IAH A E+ + IP S + + + L + + R
Sbjct: 476 VASPLEASVGLILYIAHY--AAKVEWLAPTVRSIPPASVLFMTLGLLAFSWWRGTAR--- 530
Query: 202 SIMIGITIII---LFTFPYSFSPDLLISEKGNLVALVDKNTLIS-NYSNPPSFIFSQWKS 257
I++G+ ++ L Y +PD+L G V D + + F +S W
Sbjct: 531 -IILGLLFVLSGFLLALAYK-TPDVLYGVGGVAVKEGDGQLYFAMRRGSTRGFSYSAWA- 587
Query: 258 ALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGC-HRSDVIVGVLK 316
+E Q + Q +K +C+ GC + S VI+
Sbjct: 588 -----------------RENGQPKIINGGYFGQGKKLICMAG----GCIYDSRVIISC-- 624
Query: 317 RKDMIRLSCQLSDILITT 334
+ I C +D++I T
Sbjct: 625 DTEFILQRCSEADLVIHT 642
>gi|89068876|ref|ZP_01156258.1| Putative Competence protein [Oceanicola granulosus HTCC2516]
gi|89045457|gb|EAR51521.1| Putative Competence protein [Oceanicola granulosus HTCC2516]
Length = 792
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G A+A I HF+ + YGLIAN+ ++P++ V+PA ++A L L L+ VM
Sbjct: 386 GLATAPI-AAAHFNMVSHYGLIANLASVPVMGAAVMPAAVLAACLWPLGLEGPALWVMEQ 444
Query: 152 GLDIIIHIAHRISVAHNEFCIGRI 175
GL I+ +A VA E +G +
Sbjct: 445 GLGWILAVAE--HVAGLEGAVGHV 466
>gi|269958610|ref|YP_003328397.1| putative competence protein [Anaplasma centrale str. Israel]
gi|269848439|gb|ACZ49083.1| putative competence protein [Anaplasma centrale str. Israel]
Length = 721
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 92 GSASASI----FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
GS ASI +++ HF+ V G+I+NI+AIP+ +FVVIP GL+ +++ LS+ ++
Sbjct: 409 GSLIASIATAPYVVYHFNYFSVVGVISNIVAIPLTAFVVIPLGLVYVVMDYLSIGSLVSR 468
Query: 148 VMAWGLDIIIHIAH 161
V+ + +I+ +A
Sbjct: 469 VLEMSVGLILCVAR 482
>gi|328951899|ref|YP_004369233.1| ComEC/Rec2-related protein [Desulfobacca acetoxidans DSM 11109]
gi|328452223|gb|AEB08052.1| ComEC/Rec2-related protein [Desulfobacca acetoxidans DSM 11109]
Length = 804
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 17/105 (16%)
Query: 46 ISAIGYFYSIPKMIYSSESHNTWTWKKI--------SSIKQSFLNEIRANIGTYGSASAS 97
+S G Y PK++ W W+K+ + IK+ L RA + + A+
Sbjct: 369 LSVWGLIYLSPKLL--------WPWQKLIVNREEPPTIIKKIILWSGRALSTSVAATLAT 420
Query: 98 I-FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL 141
+ ++ FH P YG++ N+LAIP++ VV+P G IA+L L L
Sbjct: 421 LPIVVASFHQAPTYGIVINLLAIPLIGGVVLPLGFIALLTSFLPL 465
>gi|84515590|ref|ZP_01002952.1| competence protein [Loktanella vestfoldensis SKA53]
gi|84510873|gb|EAQ07328.1| competence protein [Loktanella vestfoldensis SKA53]
Length = 688
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 57 KMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANI 116
+ + ++ H W + + F++ + A + T A+A HF+ + YGLIAN+
Sbjct: 378 RALRGAKLHRLPRWTR--PVMSVFVSSLVAGLATAPYAAA------HFNIMSHYGLIANL 429
Query: 117 LAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
+++P++ +V+PA ++A L L L I VM GL I+ +A + N
Sbjct: 430 ISVPLMGVLVMPAAVLAACLWPLGLAWIGLAVMEPGLRWILFVAQTTAAQPN 481
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 23 LSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
LSPP+GPA PG FDF +++ G+ A+GY
Sbjct: 159 LSPPAGPAEPGGFDFQRHAWFLGLGAVGY 187
>gi|57239310|ref|YP_180446.1| putative competence locus E protein 3 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161389|emb|CAH58313.1| putative competence protein [Ehrlichia ruminantium str.
Welgevonden]
Length = 650
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
++I HFH + G+ N+LAIP+ +F +IP L+ ++L ++L+ + + ++++
Sbjct: 390 YVIYHFHNFSIIGVFVNVLAIPVTTFFIIPLSLLYVVLSFVNLEFYISYALESSVKLLLY 449
Query: 159 IAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
++ +S + + S + I + FL + ++R +G ++I + I F +
Sbjct: 450 VSSYVSKIDSLILSFHAVSSVSILIITLGFLFLCLWNGSLRFLGLVVIVCGLFIGFQYV- 508
Query: 218 SFSPDLLIS-------EKGNLVALVDKNTLISNY 244
+PD+L++ E + V+KN I+ +
Sbjct: 509 --TPDILVNINNIAVKESDGQLYSVNKNAHITGF 540
>gi|58579276|ref|YP_197488.1| putative competence locus E protein 3 [Ehrlichia ruminantium str.
Welgevonden]
gi|58417902|emb|CAI27106.1| Similar to competence locus E protein 3 [Ehrlichia ruminantium str.
Welgevonden]
Length = 673
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
++I HFH + G+ N+LAIP+ +F +IP L+ ++L ++L+ + + ++++
Sbjct: 413 YVIYHFHNFSIIGVFVNVLAIPVTTFFIIPLSLLYVVLSFVNLEFYISYALESSVKLLLY 472
Query: 159 IAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
++ +S + + S + I + FL + ++R +G ++I + I F +
Sbjct: 473 VSSYVSKIDSLILSFHAVSSVSILIITLGFLFLCLWNGSLRFLGLVVIVCGLFIGFQYV- 531
Query: 218 SFSPDLLIS-------EKGNLVALVDKNTLISNY 244
+PD+L++ E + V+KN I+ +
Sbjct: 532 --TPDILVNINNIAVKESDGQLYSVNKNAHITGF 563
>gi|294084071|ref|YP_003550829.1| DNA uptake protein ComEC [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663644|gb|ADE38745.1| possible DNA uptake protein, ComEC [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 691
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 44/73 (60%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
S + + F +HF + +G++ANI+ IP+ ++P+G++ ++ + L+ G+M
Sbjct: 417 ASTATAPFTAQHFGAVTPWGVMANIVGIPLTGLWIMPSGILVVIGYMTGLEAYVNGIMQA 476
Query: 152 GLDIIIHIAHRIS 164
G+D+++ +A IS
Sbjct: 477 GIDLLVSLAGYIS 489
>gi|170748439|ref|YP_001754699.1| ComEC/Rec2-related protein [Methylobacterium radiotolerans JCM
2831]
gi|170654961|gb|ACB24016.1| ComEC/Rec2-related protein [Methylobacterium radiotolerans JCM
2831]
Length = 760
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/320 (19%), Positives = 124/320 (38%), Gaps = 42/320 (13%)
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI 132
+S+I + + A + T + F HF + +GL+ N L +P++S V+PA +I
Sbjct: 435 LSAITGTLATTLVAQVAT------APFATYHFQTVQPFGLVGNALTLPLVSLAVMPAAVI 488
Query: 133 AILLMILSLDNIPFGVMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMV 191
L +LD + +M + ++ I+ I+ + + + LL
Sbjct: 489 GCLAYPFALDRPVWWLMGRAVAGMLVISDWIAGFERASLVLPAFGAAALTLLTAGLLLAT 548
Query: 192 FCKTNIRHIG--SIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ +R + +++G ++L P + DL + +G A+ + ++ +P
Sbjct: 549 LPASRLRWLAVPPVLLG---LVLAARPDRY--DLYVDRQGAGAAVRGPDGRLAALGSPSG 603
Query: 250 FIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSD 309
F+ QW K D + ++L I+RS R C + C
Sbjct: 604 FVLEQW--------------LKADGDGRRPAAL--IVRSGSGR---CDRLG-CTARLPDG 643
Query: 310 VIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSN 369
V +++ + C + +LIT + T C L+I ++L +G++ +
Sbjct: 644 RAVALVRDRRAFPEDCARAAVLITFLAAPPT--CTGPLVIDRQVLAARGAVALRA---DG 698
Query: 370 DNDKVKFIIKSAIENLHFPW 389
D +F + PW
Sbjct: 699 DGFAARFARD---DGRAVPW 715
>gi|254564049|ref|YP_003071144.1| hypothetical protein METDI5735 [Methylobacterium extorquens DM4]
gi|254271327|emb|CAX27339.1| conserved membrane protein of unknown function; ComEC/Rec2 family
domain [Methylobacterium extorquens DM4]
Length = 752
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 90/226 (39%), Gaps = 19/226 (8%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG----LD 154
F HF + +GL+ N L +P++S V+PA ++ +L +LD + +M LD
Sbjct: 456 FATYHFQTVQPFGLVGNALTLPLVSLAVMPAAVLGMLAYPFALDRPVWWLMGLAVRGMLD 515
Query: 155 IIIHIA--HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
I IA + +V F G + + + LL + +R + + G+ + L
Sbjct: 516 ISAWIAGFGQANVVLPAFGTG-----ALMLLAAALLLATLPVSRLRFLALVPAGLG-VAL 569
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
P + D+ I G A+ K+ + P F+ QW L P
Sbjct: 570 AASPIRY--DIYIDRDGAGAAVRGKDGRLVVLGRPTGFVLEQW---LKADGDGRPPEAAT 624
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCI--KKSFCVGCHRSDVIVGVLK 316
+ L ++ R I K++F C R+D+++ L+
Sbjct: 625 GAAGPRCDRIGCTLTAVDGRAVALIMDKRAFAEDCARADILITRLR 670
>gi|302383255|ref|YP_003819078.1| ComEC/Rec2-related protein [Brevundimonas subvibrioides ATCC 15264]
gi|302193883|gb|ADL01455.1| ComEC/Rec2-related protein [Brevundimonas subvibrioides ATCC 15264]
Length = 726
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 5/136 (3%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F I+HF+ V+GLIAN+ PI F+++PA + LL + L V G+D ++
Sbjct: 446 FAIQHFNRTAVFGLIANLATSPIADFIMMPALALGALLEPIGLGGPFLWVAGRGVDAMLA 505
Query: 159 IAHRISVAHNEF-CIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+ H +S I P+ + L + + +R G + +I +P
Sbjct: 506 VGHWVSGLPGAVQTIASAPDYVLPISFLGVLFVCLWQGRLRWAGLPFVCAVLI----WPR 561
Query: 218 SFSPDLLISEKGNLVA 233
+ +P + I + G A
Sbjct: 562 APTPTVWIGDGGTNAA 577
>gi|254454186|ref|ZP_05067623.1| competence protein, putative [Octadecabacter antarcticus 238]
gi|198268592|gb|EDY92862.1| competence protein, putative [Octadecabacter antarcticus 238]
Length = 172
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYS--IPKMIYSSESHNT 67
P P + + LSPPSGP PG FDF ++++G+ A+GY + + S +
Sbjct: 35 PEPGQVVLM-TGHLSPPSGPVEPGGFDFQRMAWFEGLGAVGYTRTPVLLGAEASEAAAGL 93
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSA 94
W +++ +I + + + G + +A
Sbjct: 94 WVYRQRVAISRGVQDRLNGESGAFAAA 120
>gi|23012427|ref|ZP_00052514.1| COG0658: Predicted membrane metal-binding protein [Magnetospirillum
magnetotacticum MS-1]
Length = 742
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 93/221 (42%), Gaps = 9/221 (4%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F HF + +G++ N L +P++S VV+P+ ++ +L +LD + +M + ++
Sbjct: 456 FATYHFQTVQPFGIVGNALTLPLVSLVVMPSAVLGMLAYPFALDRPVWWLMGLAVRGMLE 515
Query: 159 IAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
I+ I+ + + + + L+ + +R + + GI + L P
Sbjct: 516 ISGWIAQFGRATLVLPAFEPGAMIWLAAALLIATLPVSRLRLLALLPAGIG-LALAAVPT 574
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEK 277
F D+ I G A+ ++ ++ PP F+ QW A P + +
Sbjct: 575 RF--DIYIDRDGAGAAVRGRDGRLAVLGRPPGFVLEQWLKA--DGDGRRPESASGEAGPR 630
Query: 278 NQSSLKEILRSMQPRKFLCI--KKSFCVGCHRSDVIVGVLK 316
L L ++ R + K++F C R+D+++ L+
Sbjct: 631 CD-RLGCTLVAVDGRAVALVADKRAFPEDCARADILISRLR 670
>gi|255262298|ref|ZP_05341640.1| competence protein [Thalassiobium sp. R2A62]
gi|255104633|gb|EET47307.1| competence protein [Thalassiobium sp. R2A62]
Length = 224
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F HF+ I YGLIAN+LA+P++ VV+PA ++A+ L L I F +M L I+
Sbjct: 129 FAAVHFNQISHYGLIANLLAVPMMGTVVMPAAVLAVCLAPFDLAWIGFWIMEQRLTWILF 188
Query: 159 IAH 161
+A
Sbjct: 189 VAQ 191
>gi|163736566|ref|ZP_02143985.1| competence protein [Phaeobacter gallaeciensis BS107]
gi|161390436|gb|EDQ14786.1| competence protein [Phaeobacter gallaeciensis BS107]
Length = 689
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 73/158 (46%), Gaps = 2/158 (1%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F HF+ I YGL+AN+LA+P++ +V+PA ++++ L + + +M G+ I+
Sbjct: 414 FGAAHFNMISHYGLLANVLAVPVMGALVVPAAVLSLCLAPVGASWVGLALMDLGIGWILF 473
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+A+ VA + G +P + + + L + + + + + + + S
Sbjct: 474 VAN--WVAALDGAQGAVPMPPALVLPLVALGGLLLGLWRGRLRLLGVPVLLGAALIWHGS 531
Query: 219 FSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWK 256
PD+L++ G +V ++ + + + +W
Sbjct: 532 PRPDVLVAPNGGIVGVLRAEGRALSRAKGHGYAAERWA 569
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
A L PP GP P FDF ++++ + A+GY +P +I + + + ++Q
Sbjct: 162 AHLMPPQGPVEPHGFDFRRHAWFQQLGAVGY-TRVPVLIINRSPRDL----PVEQLRQRL 216
Query: 81 LNEIRAN--IGTYGSASA 96
IR+ + T G ASA
Sbjct: 217 STGIRSQMPVATGGFASA 234
>gi|307295057|ref|ZP_07574899.1| ComEC/Rec2-related protein [Sphingobium chlorophenolicum L-1]
gi|306879531|gb|EFN10749.1| ComEC/Rec2-related protein [Sphingobium chlorophenolicum L-1]
Length = 690
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HFH V G +AN++ IP+ + VV+P A+L + + + A LD+++ +AH
Sbjct: 411 HFHKAGVLGSVANLVVIPLTTLVVMPLEAAALLFDLCGWGAPFWWLTARALDLLLLVAH- 469
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFC---KTNIRHIGSIMIGITIIILFTFPYSF 219
VA + + + P S + + M++C ++ R G + + + ++ P
Sbjct: 470 -GVASSPWAVVLAPVQSGLAFGLILFGMLWCLLWRSRWRWAGLMPVTAGVTMILATP--- 525
Query: 220 SPDLLISEKGNLVAL 234
+P +LIS G VA+
Sbjct: 526 APAILISGDGRHVAI 540
>gi|149204800|ref|ZP_01881763.1| competence protein [Roseovarius sp. TM1035]
gi|149141769|gb|EDM29822.1| competence protein [Roseovarius sp. TM1035]
Length = 672
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HF+ +GL+AN++++P++ +V+PA ++A LL+ L LD I VM GL I+ +A
Sbjct: 418 HFNQYAQFGLLANLVSVPLMGVLVMPAAVLATLLLPLGLDWIALRVMELGLRWILTVADW 477
Query: 163 ISVAHNEFCIGRIPETS-----FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
++ R+P + + + L +V + R +G + + + + + +
Sbjct: 478 VAALDGA----RVPVVAPGPYVLPLLALGALFIVLWQGRGRILGVLPVMVAVAL---WGA 530
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
+ P +++S+ G L+ ++ + N F+ W
Sbjct: 531 ADRPVMIVSDTGGLIGIMTEAGRALNKPTGGGFVADNW 568
>gi|254487263|ref|ZP_05100468.1| competence protein, putative [Roseobacter sp. GAI101]
gi|214044132|gb|EEB84770.1| competence protein, putative [Roseobacter sp. GAI101]
Length = 680
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIA 160
HF+ I YGL+AN+ ++P++ +V+PA + A++L D VM GL I+ +A
Sbjct: 421 AHFNTIAHYGLVANLASVPLMGVMVMPAAVAALVLSPFGFDPAALWVMGLGLRWILGVA 479
>gi|163742787|ref|ZP_02150172.1| competence protein [Phaeobacter gallaeciensis 2.10]
gi|161384042|gb|EDQ08426.1| competence protein [Phaeobacter gallaeciensis 2.10]
Length = 690
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 41/66 (62%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F HF+ I YGL+AN+LA+P++ +V+PA ++++ L + + +M G+ I+
Sbjct: 414 FGAAHFNMISHYGLLANVLAVPVMGALVVPAAVLSLCLAPVGASWVGLALMDLGIGWILF 473
Query: 159 IAHRIS 164
+A+ ++
Sbjct: 474 VANWVA 479
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSF 80
A L PP GP P FDF ++++ + A+GY +P +I + + + ++Q
Sbjct: 162 AHLMPPQGPVEPHGFDFRRHAWFQQLGAVGY-TRVPVLIINRSPRDL----PVEQLRQRL 216
Query: 81 LNEIRAN--IGTYGSASA 96
IR+ + T G ASA
Sbjct: 217 STGIRSQMPVATGGFASA 234
>gi|87200046|ref|YP_497303.1| ComEC/Rec2-related protein [Novosphingobium aromaticivorans DSM
12444]
gi|87135727|gb|ABD26469.1| ComEC/Rec2-related protein [Novosphingobium aromaticivorans DSM
12444]
Length = 760
Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HFH VYG +AN++AIP+ +FV +P IA+LL + L + ++ LD+++ +AH
Sbjct: 459 HFHRAGVYGSLANVIAIPLTTFVTMPLIGIALLLDLAGLGGPAWWLVETSLDLLLALAH- 517
Query: 163 ISVAHNEFCIGRIP---ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
VA + +P S++ V L + +R G + + + P
Sbjct: 518 -FVADRPGAVTMLPPGDRWSYLVFVAGMLWLALWTGRVRLWGLLPAFAAALSMALTP--- 573
Query: 220 SPDLLISEKGNLVALVDKNT 239
+PD+L++ G VA+ +
Sbjct: 574 TPDILVTGDGRHVAIAGEGA 593
>gi|188584408|ref|YP_001927853.1| ComEC/Rec2-related protein [Methylobacterium populi BJ001]
gi|179347906|gb|ACB83318.1| ComEC/Rec2-related protein [Methylobacterium populi BJ001]
Length = 753
Score = 43.1 bits (100), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 101/269 (37%), Gaps = 31/269 (11%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F HF + +GL+ N L +P++S V+PA ++ +L +LD + +M + ++
Sbjct: 456 FATYHFQTMQPFGLVGNALTLPLVSLAVMPAAVLGMLAYPFALDRPVWWLMGLAVRGMLD 515
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
I+ I+ F + +F T + L + + + + + + +
Sbjct: 516 ISAWIA----GFGQANVVLPAFGTGALALLAVALLVATL-PVSRLRLLALLPAGLGLALA 570
Query: 219 FSP---DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQ 275
SP D+ I G A+ K+ + PP FI QW A
Sbjct: 571 ASPTRYDIYIDRDGAGAAVRGKDGRLVVLGRPPGFILEQWLKA----------------- 613
Query: 276 EKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTI 335
+ + + + ++ PR C + C V ++ K C +DILI+ +
Sbjct: 614 DGDGRRPESVAGAVGPR---CDRLG-CTILALDGRAVALVTDKRAFPEDCARADILISRL 669
Query: 336 RDINTKLCNVSLLITPEILQKQGSLEITI 364
R C L+ L QG+ I +
Sbjct: 670 R--APPGCAAPLIADRSFLAAQGATAIRL 696
>gi|91204982|ref|YP_537337.1| ComEC/Rec2 family protein [Rickettsia bellii RML369-C]
gi|91068526|gb|ABE04248.1| ComEC/Rec2 family protein [Rickettsia bellii RML369-C]
Length = 393
Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 2 LSITKKY-DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+SI KKY I +A+L P PG +DF F +Y I A GY S PK+I
Sbjct: 135 ISIPKKYLQKVRVNDYIALLAKLYKPQNSILPGGYDFGFYAYLADIGANGYAMSEPKIIA 194
Query: 61 SSESH-NTWTWKKISSIKQSFLNEIRANIGTYGSA 94
+E+ +++ +K I + +N++ ++ G + +A
Sbjct: 195 RNETTIDSFIYKIRIFIYNNLINKLGSDKGNFAAA 229
>gi|157827689|ref|YP_001496753.1| ComEC/Rec2 family protein [Rickettsia bellii OSU 85-389]
gi|157802993|gb|ABV79716.1| ComEC/Rec2 family protein [Rickettsia bellii OSU 85-389]
Length = 656
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 2 LSITKKY-DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+SI KKY I +A+L P PG +DF F +Y I A GY S PK+I
Sbjct: 135 ISIPKKYLQKVRVNDYIALLAKLYKPQNSILPGGYDFGFYAYLADIGANGYAMSEPKIIA 194
Query: 61 SSESH-NTWTWKKISSIKQSFLNEIRANIGTYGSA 94
+E+ +++ +K I + +N++ ++ G + +A
Sbjct: 195 RNETTIDSFIYKIRIFIYNNLINKLGSDKGNFAAA 229
Score = 36.2 bits (82), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 76/161 (47%), Gaps = 8/161 (4%)
Query: 91 YGSASASIF----LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
Y S ASI +I F Y + N++A+P++SF ++P L+++ ++ D+
Sbjct: 403 YSSFLASIITAPVVINQFFIFSTYSVPTNLIAVPVMSFFLMPLALLSLPFTMIGFDSYIL 462
Query: 147 GVMAWGLDIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
++ + ++III AH ++ + + G I S + + F + KT R G ++
Sbjct: 463 KIIGFFIEIIIRSAHYFNNLPGSVWYFGYITNFSILLFLFGFFWICIWKTTWRLFGLAIM 522
Query: 206 GITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSN 246
++ I + YS P+L+ + + +K + Y++
Sbjct: 523 AVSFIFML---YSPKPELIFDASNMAIGVKNKQGKLEIYAD 560
>gi|144897811|emb|CAM74675.1| ComEC/Rec2-related protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 696
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIG 50
K+ +P P I A L PPS P PG FDF +++ G+ A+G
Sbjct: 135 KQAEPVPVGAEIRLWANLMPPSQPVAPGAFDFARHAWFLGLGAVG 179
Score = 36.2 bits (82), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 74/154 (48%), Gaps = 6/154 (3%)
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+S +++ HF+ V+ ++AN+LA+PI V+P ++++LLM L L+++ M W
Sbjct: 403 GSSTALYGAYHFNRFAVWSVLANLLAVPITGVAVMPFAMLSLLLMPLGLEHLALVPMGWA 462
Query: 153 LDIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
+ ++ +A + ++ + + + L ++ + + R G + ++
Sbjct: 463 VTVVNMVAAWVAALPGAAITLPPLAPWGMACFTLGGLWLLIWRGSWRLWG---LAPMVLG 519
Query: 212 LFTFPYSFSPDLLISEKGNLVALV--DKNTLISN 243
L F + PDLL+ +G L D + L+S
Sbjct: 520 LSGFFLAHPPDLLVDGRGYAFGLRMEDGSLLVSR 553
>gi|326387884|ref|ZP_08209490.1| ComEC/Rec2-related protein [Novosphingobium nitrogenifigens DSM
19370]
gi|326207930|gb|EGD58741.1| ComEC/Rec2-related protein [Novosphingobium nitrogenifigens DSM
19370]
Length = 738
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HFH +YG AN++AIP+ +F +PA +A++L + L + V L+ ++ +AH
Sbjct: 422 HFHRAGIYGAFANLVAIPLTTFTTMPAIALALVLDLAGLGAPAWWVTGKSLEALLWLAHI 481
Query: 163 ISVAHNEFC-IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ + +P F ++ L + +R G + + + + + +P
Sbjct: 482 TATMPGAVTMMPTMPGWIFGIMLAGLLWLGLWSGRVRLWGLLPVALGCAV---YAGERAP 538
Query: 222 DLLISEKGNLVAL 234
D+LIS G V L
Sbjct: 539 DVLISGDGRHVGL 551
>gi|254510419|ref|ZP_05122486.1| competence protein [Rhodobacteraceae bacterium KLH11]
gi|221534130|gb|EEE37118.1| competence protein [Rhodobacteraceae bacterium KLH11]
Length = 671
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HF+ + YGL+AN+L++P++ VV+PA ++A LL ++ I VM GL I+ +A
Sbjct: 419 HFNTMSHYGLVANLLSVPVMGTVVVPAAVVAALLAPFGVEWIALYVMGAGLRWILAVAQW 478
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMV---------FCKTNIRHIGSIMIGITIIILF 213
+S G +VT +F+L V + R +G +G + +
Sbjct: 479 VS--------GLEGARGYVTSPPDFVLPVLAAALLWLILWQGRARWLG---VGPALFAVA 527
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
+ P+ LI+E G LV ++ + + F+ + W
Sbjct: 528 MWGQGHRPEALIAETGGLVGVMTEQGRAVSKPKGSGFVATVW 569
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGY 51
A LSPP GP PG FDF ++++ + A+GY
Sbjct: 160 AHLSPPQGPVEPGGFDFRRHAWFQQLGAVGY 190
>gi|255264815|ref|ZP_05344157.1| competence protein [Thalassiobium sp. R2A62]
gi|255107150|gb|EET49824.1| competence protein [Thalassiobium sp. R2A62]
Length = 254
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 23 LSPPSGPAFPGLFDFNFSSYYKGISAIGYFYS--IPKMIYSSESHNTWTWKKISSIKQSF 80
LSPP+GP PG FDF ++++ + A+GY + + + + W +K + +
Sbjct: 146 LSPPAGPPEPGRFDFRRMAWFERLGAVGYTRAPVLAAGPDAPDGAGLWVYKIRRQLSLTV 205
Query: 81 LNEIRANIGTYGSA 94
++I +G + +A
Sbjct: 206 QDQIGGEVGAFAAA 219
>gi|197105226|ref|YP_002130603.1| ComEC/Rec2 family protein [Phenylobacterium zucineum HLK1]
gi|196478646|gb|ACG78174.1| ComEC/Rec2 family protein [Phenylobacterium zucineum HLK1]
Length = 714
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F I+HF+ + +GL+AN+ PI +F+++PA + L L IP + I
Sbjct: 439 FAIQHFNRVSTWGLLANLAVAPISTFLLMPALALGAALAPFGLGRIPLEAAG----LAIE 494
Query: 159 IAHRISVAHNEFCIGR--IPETSFVTIVVEFLLMVFC---KTNIRHIGSIMIGITIIILF 213
+ +RI+ A + + +P T+ F+ ++F + +R G + + + +L+
Sbjct: 495 LMNRIAAAAASAPMAQTLVPSAPAWTLAASFVGLLFVCLWRGRLRWAG---LPLALSVLW 551
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLI 241
P +PDL IS G VA+ + +
Sbjct: 552 A-PRPATPDLWISADGAAVAVREGREAV 578
>gi|329850632|ref|ZP_08265477.1| comEC/Rec2-related domain protein [Asticcacaulis biprosthecum C19]
gi|328840947|gb|EGF90518.1| comEC/Rec2-related domain protein [Asticcacaulis biprosthecum C19]
Length = 537
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 116/293 (39%), Gaps = 46/293 (15%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F I +F+ VY L++N+L PI +FVV+P + L L I + GL +I
Sbjct: 263 FAIAYFNRFSVYSLLSNLLEAPITAFVVMPCLALGTALAATPLGWIFLRIAGGGLWLIKE 322
Query: 159 IAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFC--KTNIRHIGSIMIGITIIILFTF 215
IA S + + + P FV V L+ C + +R G +++ +I+ +
Sbjct: 323 IAAWTSDLPYAVVTLSSAP--GFVLAVATMGLIWVCLMRGKVRWAG-LVVASSIV---WW 376
Query: 216 PYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQ 275
P PD+ I +G A+ + F F QW Q
Sbjct: 377 PRVAPPDIWIDPQGGNAAVRLADGAYVLRPKVRQFGFEQWT------------------Q 418
Query: 276 EKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVL---KRKDMIRLS--CQLSDI 330
+L E R R +LC K CV + V VG K + RL+ C S +
Sbjct: 419 HYGLRTLDEAARD---RDYLC-KGYGCVPLPSNPVKVGFWFGNKPPNDKRLAELCAASTL 474
Query: 331 LI--TTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSA 381
++ + D C+ I+ ++ G++E+T +++ + IK+A
Sbjct: 475 VVMRNPVGDWPAT-CSTVNRISAGDFRRLGAMELT-------RNEMGWAIKAA 519
>gi|307544569|ref|YP_003897048.1| ComEC-type competence protein [Halomonas elongata DSM 2581]
gi|307216593|emb|CBV41863.1| ComEC-type competence protein [Halomonas elongata DSM 2581]
Length = 779
Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIP 56
ARL PP+G A PG FD+ + +GI A GY P
Sbjct: 138 ARLRPPAGAANPGTFDYRGWLWREGIQATGYLRQTP 173
>gi|119386426|ref|YP_917481.1| ComEC/Rec2-related protein [Paracoccus denitrificans PD1222]
gi|119377021|gb|ABL71785.1| ComEC/Rec2-related protein [Paracoccus denitrificans PD1222]
Length = 717
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+T + P P + + A L PP+GP+ PG FDF ++++ + A+GY + +
Sbjct: 167 LTPQELPVPGQRVML-TAHLGPPAGPSEPGGFDFRRMAWFQRLGAVGYARAPVMTVELPA 225
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFL 100
T + I+ S ++ IG A A+ +
Sbjct: 226 DGGT---LALHRIRMSLSEAMQDRIGGQSGAVAAALM 259
Score = 36.2 bits (82), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HF + YGL+AN+L +P++ +V+P G+ A LL L L +M G D ++ +A
Sbjct: 442 HFGRMSQYGLLANMLVVPVVGTLVMPGGVFAALLAPLGLAQPALWLMGLGTDWMLTVAQW 501
Query: 163 IS 164
IS
Sbjct: 502 IS 503
>gi|332306128|ref|YP_004433979.1| DNA internalization-related competence protein ComEC/Rec2
[Glaciecola agarilytica 4H-3-7+YE-5]
gi|332173457|gb|AEE22711.1| DNA internalization-related competence protein ComEC/Rec2
[Glaciecola agarilytica 4H-3-7+YE-5]
Length = 762
Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMA--WGLDIIIH 158
F I V + N+LA+PI++ V++P L+A+++M+LSL P +M WGL +I
Sbjct: 394 QFSFISVAAPVINLLAVPIVTLVIVPLCLLAVVMMLLSLPYWPQLMMLIDWGLQFLIE 451
>gi|332557428|ref|ZP_08411750.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides WS8N]
gi|332275140|gb|EGJ20455.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides WS8N]
Length = 684
Score = 40.0 bits (92), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 4/165 (2%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G S F HF+ I VYGL+ N++A+P++ +V+PA +A LL L P VM
Sbjct: 413 GGLSTGPFAAAHFNRIAVYGLLGNLMAVPVMELLVMPAAAVAALLAPLGAAGPPLWVMNR 472
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV-VEFLLMVFCKTNIRHIGSIMIGITII 210
G I+ +AH ++ P + ++ + L ++ + R G +G +
Sbjct: 473 GARWILWVAHWVAALPGAVRAVVSPGPWVLPLLALGALWLMLWRGRARLAG---LGGMAM 529
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
+ + P LL++ G LV L+ + + F W
Sbjct: 530 AFLLWSAAERPPLLVAADGALVGLMGPEGRALSDARGGGFAARSW 574
>gi|126461477|ref|YP_001042591.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides ATCC 17029]
gi|126103141|gb|ABN75819.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides ATCC 17029]
Length = 684
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 4/165 (2%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G S F HF+ I VYGL+ N++A+P++ +V+PA +A LL L P VM
Sbjct: 413 GGLSTGPFAAAHFNRIAVYGLLGNLMAVPVMELLVMPAAAVAALLAPLGTAGPPLWVMEQ 472
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV-VEFLLMVFCKTNIRHIGSIMIGITII 210
G I+ +AH ++ P + ++ + L ++ + R G +G
Sbjct: 473 GARWILWVAHWVAALPGAVRAVVSPGPWVLPLLALGALWLMLWRGRARLAG---LGGMAT 529
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
+ + P L ++ G LV L+ + + F W
Sbjct: 530 AFLLWSAAERPPLFVAADGALVGLMGPEGRALSDARGGGFAARSW 574
>gi|327402303|ref|YP_004343141.1| ComEC/Rec2-like protein [Fluviicola taffensis DSM 16823]
gi|327317811|gb|AEA42303.1| ComEC/Rec2-related protein [Fluviicola taffensis DSM 16823]
Length = 646
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 44/186 (23%)
Query: 34 LFDFNFSSYYKGISAIGYFYS-IPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
LFD F Y + I F + I K+IY S W WK + +G
Sbjct: 342 LFDIGFQLSYVALVGIFLFQTPIYKLIYVSNKPLDWIWKG-------------SAVGIAA 388
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVV--IPAGLIA-----------ILLMIL 139
+ + + F++ FH P Y L++NI+ + +L FVV +P L+A I L L
Sbjct: 389 TITTTPFMLYWFHQFPNYFLLSNIVVM-LLGFVVLLLPIILMATAWIPYFKTLIIFLTAL 447
Query: 140 SL----------DNIPFGVMAWGLDI----IIHIAHRISVAHNEFCIGR-IPETSFVTIV 184
SL ++IP GV A G ++ + A I ++F + + IP+ +F+ +
Sbjct: 448 SLQLLILGIQWVNDIPGGVSA-GFELSFVEFLVTASLIGFCAHQFLVRKLIPKGAFLALA 506
Query: 185 VEFLLM 190
+ F L+
Sbjct: 507 LCFFLI 512
>gi|84687234|ref|ZP_01015115.1| Putative Competence protein [Maritimibacter alkaliphilus HTCC2654]
gi|84664822|gb|EAQ11305.1| Putative Competence protein [Rhodobacterales bacterium HTCC2654]
Length = 700
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
DP P I + LS P GP PG FDF ++++ I A+GY + P + +
Sbjct: 153 DPVPG-MRIAVTSHLSGPEGPVEPGGFDFRRMAWFRSIGAVGY-TTKPALALAPAERALP 210
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSA 94
+ ++I + EI G + +A
Sbjct: 211 IHRLRAAISAAVQAEIPGEAGAFAAA 236
Score = 37.4 bits (85), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 57/293 (19%), Positives = 123/293 (41%), Gaps = 41/293 (13%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F+ + YGLIAN++++P++ +V+P ++A LL L L I +M W ++ I+ +A +
Sbjct: 421 FNRVAHYGLIANVVSVPVMGTLVMPLAVLAALLAPLGLSWIALDLMRWPIEWILWVAKK- 479
Query: 164 SVAHNEFCIGRI--PETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
VA + +G + P + + ++ L V ++ + + L+T + P
Sbjct: 480 -VAALDGAVGHVIAPPDAVMPMIALGGLAVILLRGAGRAAGAVVVVAALALWT--QATRP 536
Query: 222 DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSS 281
D+LIS G+L+ + + F W ++ + +S+
Sbjct: 537 DVLISPSGSLIGAMTAEGRALTKARGEGFAARSW-------------LENDGDSTDQESA 583
Query: 282 LKEILRSMQPRKFL-CIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINT 340
+ ++ P+ L + G +D + G +C ++I + ++
Sbjct: 584 AARMAQATDPQFDLPGLTLRLVSGRGAADRLEG----------ACASEALVIFAAKPLDR 633
Query: 341 --KLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
+ CN ++ L + G+L IT+ + D +V + + + PWT+
Sbjct: 634 YPEGCN---MLDRAALARTGALAITL---TADGPRVTSVAQVSGNR---PWTR 677
>gi|260426889|ref|ZP_05780868.1| competence protein [Citreicella sp. SE45]
gi|260421381|gb|EEX14632.1| competence protein [Citreicella sp. SE45]
Length = 680
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 120/282 (42%), Gaps = 37/282 (13%)
Query: 93 SASASI----FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
SA+AS+ + HF+ I YGL+AN++++PI+ VV+P ++A LL+ LD + +
Sbjct: 406 SATASLATAPVAMAHFNLISHYGLVANLVSVPIMGMVVVPMAVVAALLLPFGLDWLALWL 465
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRI----PETSFVTIVVEFLLMVFCKTNIRHIGSIM 204
M LD I+ +A +V+ E +G + P + + LL ++ + R G +
Sbjct: 466 MKPALDWILFVAR--TVSGWEGSLGHVLAPGPMVLPLLALGGLLLCLW-QGRFRFAGLVP 522
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFH 264
+ + + S PD+LI++ G LV + +N + F+ W
Sbjct: 523 V---ALAAALWSASARPDVLIADTGALVGAMTENGRALSRERGAGFLAGIW--------- 570
Query: 265 EAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLS 324
L+ Q+ +E ++ P + R + G R
Sbjct: 571 ---------LENDGQAGGQEEAAALWPPGAEERTARITLAGLRVTHLQG--SRAAQAFGG 619
Query: 325 CQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIP 366
C S+++++++ C++ PE L+ G++ + + P
Sbjct: 620 CDGSELVVSSVDIPEIPGCDI---YDPERLRATGAVAVWLTP 658
>gi|312883538|ref|ZP_07743263.1| hypothetical protein VIBC2010_12004 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368761|gb|EFP96288.1| hypothetical protein VIBC2010_12004 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 695
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHR 162
FH I + L NIL +P SFVVIP +A L + ++ I + + LD++I++ +
Sbjct: 327 FHGISTFSLFLNILFVPWFSFVVIPLNFLAFLTLSFGKVNQILWSSVDASLDLVIYVLNH 386
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITII 210
+ + IP F+ +VV ++F K + ++GITII
Sbjct: 387 LPQGWWDIDSELIPYFFFLPLVV-MCSLIFSKKTLG-----LLGITII 428
>gi|117923910|ref|YP_864527.1| DNA internalization-related competence protein ComEC/Rec2
[Magnetococcus sp. MC-1]
gi|117607666|gb|ABK43121.1| DNA internalization-related competence protein ComEC/Rec2
[Magnetococcus sp. MC-1]
Length = 815
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
FH + +YG+ N+L IP + F+V+P GL+A++L
Sbjct: 429 FHRVALYGVGLNLLVIPWVGFLVVPVGLLAVVL 461
>gi|291166064|gb|EFE28110.1| late competence operon required for DNA binding and uptake
[Filifactor alocis ATCC 35896]
Length = 450
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 14/166 (8%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I +KYD A + + + + P ++D F + + +IG FY PK+ +
Sbjct: 241 IRRKYDLLAAVSFLITVILIHNPWK-----VWDIGFQLSFASVISIGIFY--PKLHRTMG 293
Query: 64 SHNTW-----TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILA 118
TW W+ + ++ I + I +FH IP+YG+IAN++A
Sbjct: 294 QFLTWNPTNKVWEYGKVMVGYMISLIEVTVA--AQLLTLPLCIYYFHQIPIYGIIANLVA 351
Query: 119 IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS 164
IP+++ +I + L +++ + G+D ++H H+++
Sbjct: 352 IPMITIDMILFLVAFFLPNGFFVEHYVIELCNKGMDYLLHWIHQLT 397
>gi|238898331|ref|YP_002924012.1| DNA internalization-related competence protein with
metallo-beta-lactamase domain [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
gi|229466090|gb|ACQ67864.1| DNA internalization-related competence protein with
metallo-beta-lactamase domain [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
Length = 773
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
FH I + LIAN+ A+PI+SF+ IPA L+A L
Sbjct: 394 FHGISLSSLIANLWAVPIISFITIPAILLAFL 425
>gi|91204981|ref|YP_537336.1| ComEC/Rec2 family protein [Rickettsia bellii RML369-C]
gi|91068525|gb|ABE04247.1| ComEC/Rec2 family protein [Rickettsia bellii RML369-C]
Length = 275
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 76/161 (47%), Gaps = 8/161 (4%)
Query: 91 YGSASASIF----LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
Y S ASI +I F Y + N++A+P++SF ++P L+++ ++ D+
Sbjct: 22 YSSFLASIITAPVVINQFFIFSTYSVPTNLIAVPVMSFFLMPLALLSLPFTMIGFDSYIL 81
Query: 147 GVMAWGLDIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
++ + ++III AH ++ + + G I S + + F + KT R G ++
Sbjct: 82 KIIGFFIEIIIRSAHYFNNLPGSVWYFGYITNFSILLFLFGFFWICIWKTTWRLFGLAIM 141
Query: 206 GITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSN 246
++ I + YS P+L+ + + +K + Y++
Sbjct: 142 AVSFIFML---YSPKPELIFDASNMAIGVKNKQGKLEIYAD 179
>gi|78485301|ref|YP_391226.1| DNA internalization-related competence protein ComEC/Rec2
[Thiomicrospira crunogena XCL-2]
gi|78363587|gb|ABB41552.1| DNA internalization-related competence protein ComEC/Rec2
[Thiomicrospira crunogena XCL-2]
Length = 841
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 9/66 (13%)
Query: 100 LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL---------MILSLDNIPFGVMA 150
L+ ++H I + ++N++A+P +S + +P I +LL +I+SL+N + +
Sbjct: 419 LVSYYHQIALASFLSNLIAVPFVSLIALPLLFITVLLSFVSTSLASVIMSLNNFLWQSLW 478
Query: 151 WGLDII 156
WGL+ +
Sbjct: 479 WGLETL 484
>gi|327393336|dbj|BAK10758.1| DNA Internalization-related competence YcaI [Pantoea ananatis
AJ13355]
Length = 751
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
F+ I + LIAN+LAIP++SFV +P L+A+LL + +L
Sbjct: 382 FNGISITALIANLLAIPVVSFVTVPLILVAMLLPVPALST 421
>gi|77462543|ref|YP_352047.1| putative competence protein [Rhodobacter sphaeroides 2.4.1]
gi|77386961|gb|ABA78146.1| Putative Competence protein [Rhodobacter sphaeroides 2.4.1]
Length = 684
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 4/165 (2%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G S F HF+ I VYGL+ N++A+P++ +V+PA +A LL L P VM
Sbjct: 413 GGLSTGPFAAAHFNRIAVYGLLGNLMAVPVMELLVMPAAAVAALLAPLGAAGPPLWVMEQ 472
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTI-VVEFLLMVFCKTNIRHIGSIMIGITII 210
G I+ +AH ++ P + + + L ++ + R G + G+ +
Sbjct: 473 GARWILWVAHWVAALPGAVRAVVSPGPWVLPLFALGSLWLMLWRGRARLAG--LAGMAMA 530
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
L + + P L ++ G LV L+ + + F W
Sbjct: 531 FLL-WSAAERPPLFVAADGALVGLMGPEGRALSDARGGGFAARSW 574
>gi|221638397|ref|YP_002524659.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides KD131]
gi|221159178|gb|ACM00158.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides KD131]
Length = 684
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 4/165 (2%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
G S F HF+ I VYGL+ N++A+P++ +V+PA +A LL L P VM
Sbjct: 413 GGLSTGPFAAAHFNRIAVYGLLGNLMAVPVMELLVMPAAAVAALLAPLGAAGPPLWVMEQ 472
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV-VEFLLMVFCKTNIRHIGSIMIGITII 210
G I+ +AH ++ P + ++ + L ++ + R G +G
Sbjct: 473 GARWILWVAHWVAALPGAVRAVVSPGPWVLPLLALGALWLMLWRGRARLAG---LGGMAT 529
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
+ + P L ++ G LV L+ + + F W
Sbjct: 530 AFLLWSAAERPPLFVAADGALVGLMGPEGRALSDARGGGFAARSW 574
>gi|77918648|ref|YP_356463.1| DNA internalization-related competence protein ComEC/Rec2
[Pelobacter carbinolicus DSM 2380]
gi|77544731|gb|ABA88293.1| DNA internalization-related competence protein ComEC/Rec2
[Pelobacter carbinolicus DSM 2380]
Length = 785
Score = 38.1 bits (87), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 27/38 (71%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
F++ HFH + GL+ N+ A P+ + ++IPAGL+ ++L
Sbjct: 402 FVLWHFHLVAPAGLLVNLWAGPLFAGLIIPAGLLGLIL 439
>gi|291616909|ref|YP_003519651.1| YcaI [Pantoea ananatis LMG 20103]
gi|291151939|gb|ADD76523.1| YcaI [Pantoea ananatis LMG 20103]
Length = 764
Score = 38.1 bits (87), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
F+ I + LIAN+LAIP++SFV +P L+A+LL
Sbjct: 395 FNGISITALIANLLAIPVVSFVTVPLILVAMLL 427
>gi|119897803|ref|YP_933016.1| putative DNA uptake/competence protein [Azoarcus sp. BH72]
gi|119670216|emb|CAL94129.1| putative DNA uptake/competence protein [Azoarcus sp. BH72]
Length = 769
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD 142
L+ FH P+ +AN +AIP++SFVV P +A+L M+L D
Sbjct: 392 LLVALFHSFPLVSPLANAVAIPLVSFVVTP---LALLAMVLPWD 432
>gi|196008945|ref|XP_002114338.1| hypothetical protein TRIADDRAFT_27970 [Trichoplax adhaerens]
gi|190583357|gb|EDV23428.1| hypothetical protein TRIADDRAFT_27970 [Trichoplax adhaerens]
Length = 1724
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 5/120 (4%)
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCI-PVYGLIANILAIPILS 123
+TW + I + + + NEI A TYG +A +IK + VYG+ N + +++
Sbjct: 1588 QDTWQFANIIDVNKLYTNEIHAMASTYGIEAAYRAIIKEIENVFRVYGIDVNYRHLSLIA 1647
Query: 124 -FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
++ + + ++ + PF M++ + +H R + AH E + + P + VT
Sbjct: 1648 DYMTYEGSYRPLNRLGMASCSSPFQKMSF--ETTVHFL-REATAHGEIDVLKSPSSRLVT 1704
>gi|89100803|ref|ZP_01173655.1| late competence protein (DNA uptake) [Bacillus sp. NRRL B-14911]
gi|89084449|gb|EAR63598.1| late competence protein (DNA uptake) [Bacillus sp. NRRL B-14911]
Length = 615
Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
ASA I L F+ I ++ L AN+L IP SF+++P L+ LL ILS N
Sbjct: 373 ASAPIILF-FFYEISLFALFANLLYIPFFSFILLPGILLGFLLHILSGGN 421
>gi|92117258|ref|YP_576987.1| ComEC/Rec2-related protein [Nitrobacter hamburgensis X14]
gi|91800152|gb|ABE62527.1| ComEC/Rec2-related protein [Nitrobacter hamburgensis X14]
Length = 413
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
LS+ K P + +E ARL PP P PG +DF Y++GI A G+ K++
Sbjct: 177 LSVKKGTAP-AVGSFVELKARLQPPLTPLRPGSYDFARDMYFQGIGASGFVMGAIKIV 233
>gi|308274661|emb|CBX31260.1| hypothetical protein N47_E47720 [uncultured Desulfobacterium sp.]
Length = 835
Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 49 IGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP 108
+G Y++ + E W + FL + A IGT ++ +F+ I
Sbjct: 372 LGMNYTLYRKNKKDEVDKGWLPGLRRKVTAFFLVSLFATIGTLP------VVMYYFNRIS 425
Query: 109 VYGLIANILAIPILSFVVIPAGLIAILLMILSL 141
+ GL AN +A+P++ F V+ AGL++ L LS+
Sbjct: 426 LVGLAANCIAVPLIGFAVVSAGLLSFALHPLSI 458
>gi|262195133|ref|YP_003266342.1| DNA internalization-related competence protein ComEC/Rec2
[Haliangium ochraceum DSM 14365]
gi|262078480|gb|ACY14449.1| DNA internalization-related competence protein ComEC/Rec2
[Haliangium ochraceum DSM 14365]
Length = 880
Score = 37.0 bits (84), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F + GL+AN++A+P++ V+P G++ +LL + N P G + LD+ +
Sbjct: 445 FGAVATGGLLANLVAVPLVELAVVPVGMLGLLLAAV---NQPLGQLV--LDLAV 493
>gi|303314453|ref|XP_003067235.1| Phosphatidylinositol 3- and 4-kinase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240106903|gb|EER25090.1| Phosphatidylinositol 3- and 4-kinase family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 2874
Score = 37.0 bits (84), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 251 IFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDV 310
+F +W S + + Q DL++ Q SLK+I++S Q +C+ + G H ++
Sbjct: 1460 VFHRWLSEFLDDY------QAHDLKDDEQRSLKKIIKSSQD---ICLAGNASKGTHEGEL 1510
Query: 311 IVGVLKRKDMIR--LSCQLSDILITTI 335
+V +L+ K R LS SD+ T +
Sbjct: 1511 MVELLQGKVSGRNLLSSAASDLAFTQL 1537
>gi|320037525|gb|EFW19462.1| phosphotidylinositol kinase [Coccidioides posadasii str. Silveira]
Length = 2893
Score = 37.0 bits (84), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 251 IFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDV 310
+F +W S + + Q DL++ Q SLK+I++S Q +C+ + G H ++
Sbjct: 1478 VFHRWLSEFLDDY------QAHDLKDDEQRSLKKIIKSSQD---ICLAGNASKGTHEGEL 1528
Query: 311 IVGVLKRKDMIR--LSCQLSDILITTI 335
+V +L+ K R LS SD+ T +
Sbjct: 1529 MVELLQGKVSGRNLLSSAASDLAFTQL 1555
>gi|301612658|ref|XP_002935831.1| PREDICTED: probable UDP-sugar transporter protein SLC35A5-like
[Xenopus (Silurana) tropicalis]
Length = 413
Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 146 FGVMAWGLDIIIHIAHRISV-------AHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR 198
FGV+ GL +++H H + HN F I I T+FV + V F+L + N+
Sbjct: 262 FGVLFNGLTLVLHEEHFSKIKSCGFFYGHNGFSIALIFSTAFVGLTVAFILKF--RDNMF 319
Query: 199 HIGSIMIGITIIILFT-FPYSFSPDL 223
H+ + + II + + F ++F P L
Sbjct: 320 HVLTAQLTTVIITIVSYFVFNFKPSL 345
>gi|218885336|ref|YP_002434657.1| McrBC 5-methylcytosine restriction system component-like protein
[Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218756290|gb|ACL07189.1| McrBC 5-methylcytosine restriction system component-like protein
[Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 397
Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 217 YSFSPDLLISEKGNLVALVD---KNTLISNYSNPPSF--IFSQWKSALITPFHEAPHVQK 271
YS PD++ISE GNL + D K IS++ ++ + + ALI P ++
Sbjct: 303 YSVCPDIIISEGGNLRLIADAKYKKPTISDHYQLYTYLSVLGAKRGALIAPSFTGFDIET 362
Query: 272 EDLQEKNQSSLKEILRSMQ 290
++ Q +Q ++ EI MQ
Sbjct: 363 KEFQTPSQHTITEIYLPMQ 381
>gi|238749768|ref|ZP_04611273.1| hypothetical protein yrohd0001_30880 [Yersinia rohdei ATCC 43380]
gi|238712423|gb|EEQ04636.1| hypothetical protein yrohd0001_30880 [Yersinia rohdei ATCC 43380]
Length = 720
Score = 36.6 bits (83), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 101 IKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
I FH I +Y + AN+ A+P++S + +P L+A++ M+L
Sbjct: 343 ISLFHGISLYSIPANLWAVPLVSLITVPCVLLALIFMLL 381
>gi|297622796|ref|YP_003704230.1| DNA internalization-related competence protein ComEC/Rec2 [Truepera
radiovictrix DSM 17093]
gi|297163976|gb|ADI13687.1| DNA internalization-related competence protein ComEC/Rec2 [Truepera
radiovictrix DSM 17093]
Length = 796
Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 20/119 (16%)
Query: 29 PAFPGLFDFNFSSYYKGISAIGYFY--SIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA 86
P+F LFD +F Y + I F ++ +++ + + W W + +
Sbjct: 360 PSF--LFDLSFQLSYGSVMGILLFAGPTLRRLLGARAASLAW-WHPGTLLVG-------- 408
Query: 87 NIGTYGSASASI----FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL 141
G SASA F+ HF+ +P++G + N++A+P L+ +++P G +A L ++SL
Sbjct: 409 --GAVVSASAQALTLPFVAHHFNLVPLFGPLVNVVAVP-LATLLVPLGFLAGLAGLVSL 464
>gi|253688155|ref|YP_003017345.1| DNA internalization-related competence protein ComEC/Rec2
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|251754733|gb|ACT12809.1| DNA internalization-related competence protein ComEC/Rec2
[Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 763
Score = 36.2 bits (82), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 20/120 (16%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
FH + L AN+ A+P++SFV P ILL + ++ +P G M W L I+ R+
Sbjct: 392 FHGFSITSLPANLWAVPLVSFVTTP----LILLALSTMAFVPLGEMLWWL---ADISLRV 444
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLL--------MVFCKTNIRHIGSIMIGITIIILFTF 215
A + +T ++ + LL +V + I + IG+ I++L F
Sbjct: 445 VFAPLTYL-----QTGWIYLDASLLLGSVAGWGAVVIWRFRWWRIHPMSIGVLILVLLAF 499
>gi|16800585|ref|NP_470853.1| hypothetical protein lin1517 [Listeria innocua Clip11262]
gi|16413990|emb|CAC96748.1| comEC [Listeria innocua Clip11262]
Length = 746
Score = 36.2 bits (82), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGL 153
+S+ ++ HF+ G+ N+L +P+ + +V+P L LL I+S L IP ++ + +
Sbjct: 360 SSVVMMYHFYSFSWVGIFFNLLYVPLFTIIVLPGCLGVFLLSIISPTLMKIPEYMLTFLI 419
Query: 154 DIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVF 192
++ + + + + H GR P T + +++ +L+ F
Sbjct: 420 QLMESLTNLFAKIPHQTIITGR-PNTIMLVLIIATILLFF 458
>gi|229825120|ref|ZP_04451189.1| hypothetical protein GCWU000182_00471 [Abiotrophia defectiva ATCC
49176]
gi|229790492|gb|EEP26606.1| hypothetical protein GCWU000182_00471 [Abiotrophia defectiva ATCC
49176]
Length = 810
Score = 36.2 bits (82), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 17/133 (12%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY--S 61
I K YD P+ + I +S + F +F ++ IG FY +P+++Y +
Sbjct: 285 IGKSYD-LPSGLALAAIVIMSINHRVIYQSGFQLSF------LAVIGIFYIMPELMYIFN 337
Query: 62 SESHNTWTWKKISS-IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
+S NT K++ I S + + N+ A+ + LI +F+ I + G++ NI+ IP
Sbjct: 338 VQSLNTKGINKLAYVILSSIICSVSINL-----ATLPVILI-NFYEISLLGIVLNIIVIP 391
Query: 121 ILSFVVIPAGLIA 133
++S +V+ GLI
Sbjct: 392 LMSVLVV-TGLIG 403
Searching..................................................done
Results from round 2
>gi|254780357|ref|YP_003064770.1| hypothetical protein CLIBASIA_01210 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040034|gb|ACT56830.1| hypothetical protein CLIBASIA_01210 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 394
Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats.
Identities = 394/394 (100%), Positives = 394/394 (100%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY
Sbjct: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP
Sbjct: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF
Sbjct: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL
Sbjct: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS
Sbjct: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL
Sbjct: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
EITIIPPSNDNDKVKFIIKSAIENLHFPWTKHRI
Sbjct: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
>gi|86357548|ref|YP_469440.1| hypothetical protein RHE_CH01927 [Rhizobium etli CFN 42]
gi|86281650|gb|ABC90713.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 848
Score = 256 bits (653), Expect = 5e-66, Method: Composition-based stats.
Identities = 109/375 (29%), Positives = 185/375 (49%), Gaps = 26/375 (6%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ +S + + ++ ++ ++ F + G
Sbjct: 463 SFQMSFAATLALVSVY-QLWKDRPVRQNALLKMPALRPVVAVVR--FFGGVF-LTSLIGG 518
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
S ++F I+HFH + YGL AN+ +PI+SF+V+PAGL+A+LLM LD +P+ V+ +GL
Sbjct: 519 FSTALFSIEHFHRLTAYGLPANLATMPIISFIVMPAGLLAMLLMPFGLDTLPWKVVGFGL 578
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
D++I +A IS IGR+P F V FLLM +T +RH+G+ +I ++ + +
Sbjct: 579 DLVIAVAKTISGWGGNIDIGRLPGWYFSVAVAGFLLMSLLRTRLRHVGTALIAVSTVTVL 638
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE- 272
P S P L+ISE G LVA+V L SN P FIFSQW+ AL+ P H P +
Sbjct: 639 VLPASRPPHLVISEDGALVAVVATAALASNRERPSDFIFSQWQRALVLPTHHPPKMLDGP 698
Query: 273 --------------DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRK 318
+ Q + + +++ + +F C+KK++C + +V V++
Sbjct: 699 AVPEEKDRRLRLSREQQNEARIAIRTAAAEGEAERFSCVKKAWCTARLANGHVVTVIENA 758
Query: 319 DMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFII 378
+ +C DI++T++R + + L T E L++ GSLE+ +
Sbjct: 759 AYLGPACDAGDIVVTSVRLRFASCRSGAALFTGETLRRTGSLELRFADSG-------LEV 811
Query: 379 KSAIENLHFPWTKHR 393
+A + L PW +HR
Sbjct: 812 TTAFDALSRPWKRHR 826
Score = 84.5 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 14/152 (9%)
Query: 4 ITKKYD-PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
I + D PF I G ARL+PP+GPA P L DF+F +Y+ GI A G+FY P +
Sbjct: 232 IARGADAPFEIGDIITGRARLTPPAGPALPALNDFSFGAYFDGIGANGFFYGAPTKLDPQ 291
Query: 63 ESHNTWTWK------KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV------- 109
W ++ ++ + IR+ + A A+ + I
Sbjct: 292 VEPPGARWTSDALLERLYRLRSGIGDRIRSILPGDTGAFAAALVTDERRAISNETTEALR 351
Query: 110 YGLIANILAIPILSFVVIPAGLIAILLMILSL 141
+A+I+AI L+ + M+LSL
Sbjct: 352 QSGLAHIIAISGLNMALSAGIFFVGFRMLLSL 383
>gi|15965263|ref|NP_385616.1| hypothetical protein SMc02086 [Sinorhizobium meliloti 1021]
gi|307309286|ref|ZP_07588954.1| ComEC/Rec2-related protein [Sinorhizobium meliloti BL225C]
gi|15074443|emb|CAC46089.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
gi|306900287|gb|EFN30904.1| ComEC/Rec2-related protein [Sinorhizobium meliloti BL225C]
Length = 801
Score = 255 bits (651), Expect = 8e-66, Method: Composition-based stats.
Identities = 92/369 (24%), Positives = 167/369 (45%), Gaps = 11/369 (2%)
Query: 26 PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR 85
PS A PG F +F++ ++ + + + + + + +
Sbjct: 427 PSAAAGPG-FQMSFAATLALVAGYSRWRDHRRKDRETPRN-----RGGAGVVSGLAIGTV 480
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
A G + +++ HF+ +P YGL AN+L P++S +++P L A+LLM L+ P
Sbjct: 481 A-TSVIGGLATAVYAAAHFNRLPGYGLAANVLTTPLISVLIMPFALFAMLLMPFGLEYYP 539
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
VM GLD ++ +A ++ E+ GR+ + F I +L+ +T + +G+ +I
Sbjct: 540 LVVMGQGLDWMLTVARYVASLDGEWTTGRMGDVQFFLIAFGGILLCVLRTRLALVGAGLI 599
Query: 206 GITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHE 265
+ + + P P + ISE LV L+ + + +N S PP FIFSQW+ AL H+
Sbjct: 600 ALGVCAIALEPQKERPSIAISEDAQLVGLITADAIATNRSRPPEFIFSQWQRALAIAAHK 659
Query: 266 APHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSC 325
AP + + L S + F C K + C G R V V+++ + + C
Sbjct: 660 APV--DLAAEPDTAAGTAAFLTSARAGVFACRKGTGCAGRSREGWTVAVIEKAESLSFLC 717
Query: 326 QLSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIEN 384
D+++ R + SL+I+ E L++ G++EI + + S+ +
Sbjct: 718 GRVDLVVVASRRPSAGCPPGGSLVISTETLRRTGAVEIH-AEQEQPGAPPRMRVVSSFSS 776
Query: 385 LHFPWTKHR 393
PW +HR
Sbjct: 777 TERPWQRHR 785
Score = 83.3 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 51/84 (60%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ FP TIEG ARLSPPSGPA PGL DF F +Y+KG+ A+GYFY P+ + +
Sbjct: 204 SRHEAFPVGATIEGKARLSPPSGPALPGLNDFAFGAYFKGVGAVGYFYGAPRAPVDAGAV 263
Query: 66 NTWTWKKISSIKQSFLNEIRANIG 89
+ + + ++L +R IG
Sbjct: 264 TDRSQASLPAKAAAYLALVREAIG 287
>gi|190891621|ref|YP_001978163.1| hypothetical protein RHECIAT_CH0002024 [Rhizobium etli CIAT 652]
gi|190696900|gb|ACE90985.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 820
Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats.
Identities = 110/376 (29%), Positives = 190/376 (50%), Gaps = 27/376 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ + GY + I + + ++++ F ++ G
Sbjct: 434 SFQMSFAATSALV--SGYQLWKDRRIRENPLLKLPLLRPVAAVAGFFGGVFLTSL--IGG 489
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
S ++F I+HFH + YGL AN+ +PI+SF+V+PAGL+A+LLM LD + V+ +GL
Sbjct: 490 FSTALFSIEHFHRLTAYGLPANLATMPIISFIVMPAGLLAMLLMPFGLDAPLWTVVGFGL 549
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
D++I +A +S + GR+P FV V FLL+ +T +RH G+ ++ + +IL
Sbjct: 550 DLVIAVAKTVSGWGGDIGFGRLPGWYFVVAVAGFLLLTLLRTRLRHAGTSILAVATLILL 609
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE- 272
P S PDL+ISE G LV LV + SN NPP FIF QW+ AL+ P H P +
Sbjct: 610 ILPGSPPPDLVISEDGGLVGLVAATAMASNRENPPDFIFDQWQRALVLPTHHPPKMLDGP 669
Query: 273 ---------------DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKR 317
D Q + ++++ + +F C+KK++C+ + +V V+
Sbjct: 670 AIPPQGEDRRVKLSRDQQNEARTAMVAAAAGGEANRFSCVKKAWCIARLGNGNVVAVIDN 729
Query: 318 KDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFI 377
+ +C +I++T++R + + + L T E L++ GS+E+ + ++
Sbjct: 730 AAYLGPACDAGEIVVTSVRLRFDRCRSGATLFTGETLRRTGSVELRFVQTGHE------- 782
Query: 378 IKSAIENLHFPWTKHR 393
I +A + L PW +HR
Sbjct: 783 IATAFDALSRPWMRHR 798
Score = 83.3 bits (204), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 4 ITKKYD-PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFY--------- 53
I + D PF I G ARL+PP+GPA PGL DF+F +Y+ GI A G+FY
Sbjct: 203 IARGADMPFEIGDIITGRARLTPPAGPALPGLNDFSFGAYFDGIGANGFFYRAPEKVDLQ 262
Query: 54 -SIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
P + +S++ W ++ S I + + + G + +A +
Sbjct: 263 AGPPAVTSTSDALLEWLYRLRSGIGDRIRSMLPGDTGAFAAALVT 307
>gi|327189235|gb|EGE56414.1| hypothetical protein RHECNPAF_70025 [Rhizobium etli CNPAF512]
Length = 820
Score = 253 bits (646), Expect = 3e-65, Method: Composition-based stats.
Identities = 109/376 (28%), Positives = 188/376 (50%), Gaps = 27/376 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ + GY + I + + ++++ F ++ G
Sbjct: 434 SFQMSFAATLALV--SGYQLWKDRRIRENPLLKLPVLRPVAAVAGFFGGVFLTSL--IGG 489
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
S ++F I+HFH + YGL AN+ +PI+SF+V+PAGL+A+LLM LD + V+ +GL
Sbjct: 490 FSTALFSIEHFHRLTAYGLPANLATMPIISFIVMPAGLLAMLLMPFGLDAPLWTVVGFGL 549
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
D++I +A +S + GR+P FV V FLL+ +T +R G+ ++ + +IL
Sbjct: 550 DLVIAVAKTVSGWGGDIGFGRLPGWYFVVAVAGFLLLTLLRTRLRQAGTSILAVATLILL 609
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE- 272
P S PDL+ISE G LV LV + SN NPP FIF QW+ AL+ P H P +
Sbjct: 610 ILPGSRPPDLVISEDGGLVGLVAATAMASNRENPPDFIFDQWQRALVLPTHHPPKMLDGP 669
Query: 273 ---------------DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKR 317
D Q + ++++ + +F C+KK++C+ + +V V+
Sbjct: 670 AIPPQGEDRRVKLSRDQQNEARTAMVAAAAGGEANRFSCVKKAWCIARLGNGHVVAVIDN 729
Query: 318 KDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFI 377
+ +C++ +I++T++R + + + L T E L++ GS+E+
Sbjct: 730 AAYLGPACEVGEIVVTSVRLRFDRCRSGATLFTGETLRRTGSVELRFAQTG-------LE 782
Query: 378 IKSAIENLHFPWTKHR 393
I +A + L PW +HR
Sbjct: 783 IATAFDALSRPWMRHR 798
Score = 83.3 bits (204), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 11/105 (10%)
Query: 4 ITKKYD-PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPK----- 57
I + D PF I G ARL+PP+GPA PGL DF+F +Y+ GI A G+FY P+
Sbjct: 203 IARGADMPFEIGDIITGRARLTPPAGPALPGLNDFSFGAYFDGIGANGFFYGAPEKVDLQ 262
Query: 58 -----MIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+ +S++ W ++ S I + + + G + +A +
Sbjct: 263 AGPPAVTSTSDALLEWLYRLRSGIGDRIRSILPGDTGAFAAALVT 307
>gi|218463027|ref|ZP_03503118.1| hypothetical protein RetlK5_27913 [Rhizobium etli Kim 5]
Length = 527
Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 107/376 (28%), Positives = 189/376 (50%), Gaps = 27/376 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ + GY + + + + + ++ F ++ G
Sbjct: 141 SFQMSFAATLALV--SGYQLWKERRVRENPLLKLPVLRLVVAVAGFFGGVFLTSL--IGG 196
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
S ++F ++HFH + YGL AN+ +PI+SF+V+PAGL+A+LLM LD + V+ +GL
Sbjct: 197 FSTALFAVEHFHRLTAYGLPANLATMPIISFIVMPAGLLAMLLMPFGLDAPLWTVVGFGL 256
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
D++I +A +S + +GR+P F V FLL+ +T +RH G+ ++ ++ +I+
Sbjct: 257 DLVIAVAKTVSAWGGDIDLGRLPAWYFAVAVAGFLLLTLLRTRLRHAGTSILAVSTLIVL 316
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE- 272
P S PDL+ISE G LVALV + SN NPP FIF QW+ AL+ P H P +
Sbjct: 317 ILPGSRPPDLVISEDGGLVALVATAAMASNRENPPDFIFDQWQRALVLPTHHPPKMLDGP 376
Query: 273 ---------------DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKR 317
D Q + ++++ + +F C+KK++C+ + +V V+
Sbjct: 377 AIPPQGEDRRLRLSRDQQNEARTAMMAAAAGGEANRFSCVKKAWCIARLGNGHVVAVIDN 436
Query: 318 KDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFI 377
+ +C S+I++T +R + + + L T E L++ GS+E+ +
Sbjct: 437 AAYLGPACDASEIVVTAVRLRFDRCHSGATLFTGETLRRTGSVELRFAQTGPE------- 489
Query: 378 IKSAIENLHFPWTKHR 393
+ +A + L PW +HR
Sbjct: 490 VATAFDTLSRPWMRHR 505
>gi|307317027|ref|ZP_07596468.1| ComEC/Rec2-related protein [Sinorhizobium meliloti AK83]
gi|306897115|gb|EFN27860.1| ComEC/Rec2-related protein [Sinorhizobium meliloti AK83]
Length = 801
Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats.
Identities = 93/369 (25%), Positives = 166/369 (44%), Gaps = 11/369 (2%)
Query: 26 PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR 85
PS A PG F +F++ ++ + + + + + + +
Sbjct: 427 PSAAAGPG-FQMSFAATLALVAGYSRWRDHRRKDRETPRN-----RGGAGVVSGLAIGTV 480
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
A G + +++ HF+ +P YGL AN+L P++S +++P L A+LLM L+ P
Sbjct: 481 A-TSVIGGLATAVYAAAHFNRLPGYGLAANVLTTPLISVLIMPFALFAMLLMPFGLEYYP 539
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
VM GLD ++ +A ++ E+ GR+ + F I +L+ +T + +G+ +I
Sbjct: 540 LVVMGQGLDWMLAVARYVASLDGEWTTGRMGDVQFFLIAFGGILLCVLRTRLALVGAGLI 599
Query: 206 GITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHE 265
+ + P P + ISE LV LV + + +N S PP FIFSQW+ AL H+
Sbjct: 600 ALGASAIVLEPRKERPSIAISEDAQLVGLVAADAIATNRSRPPEFIFSQWQRALAIAAHK 659
Query: 266 APHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSC 325
AP + + L S + F C K + C G R V V+++ + + C
Sbjct: 660 APV--DLAAEPDTAAGTSAFLTSARAGVFACRKGTGCAGRSREGWTVAVIEKAESLSFLC 717
Query: 326 QLSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIEN 384
D+++ R + SL+I+ E L++ G++EI + + S+ +
Sbjct: 718 GRVDLVVVASRRPSAGCPPGGSLVISTETLRRTGAVEIH-AEQEQPGAAPRMRVVSSFSS 776
Query: 385 LHFPWTKHR 393
PW +HR
Sbjct: 777 TERPWQRHR 785
Score = 82.5 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 51/84 (60%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++ FP TIEG ARLSPPSGPA PGL DF F +Y+KG+ A+GYFY P+ + +
Sbjct: 204 SRHEAFPVGATIEGKARLSPPSGPALPGLNDFAFGAYFKGVGAVGYFYGAPRAPVDAGAV 263
Query: 66 NTWTWKKISSIKQSFLNEIRANIG 89
+ + + ++L +R IG
Sbjct: 264 TDRSQASLPAKAAAYLALVREAIG 287
>gi|209549196|ref|YP_002281113.1| ComEC/Rec2-related protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209534952|gb|ACI54887.1| ComEC/Rec2-related protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 810
Score = 249 bits (636), Expect = 4e-64, Method: Composition-based stats.
Identities = 105/376 (27%), Positives = 181/376 (48%), Gaps = 27/376 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ + GY + I + ++ + ++ F ++ G
Sbjct: 424 SFQMSFAATLALV--SGYQLWKDRRIRENAWLKLPVFRPVVAVAGFFGGVFLTSL--IGG 479
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
S ++F I+HFH + YGL AN+ +PI+SF+V+PAGL+A+LLM LD + V+ +GL
Sbjct: 480 FSTALFSIEHFHRLTAYGLPANLATMPIISFIVMPAGLLAMLLMPFGLDTPLWKVVGFGL 539
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
D++I +A +S + +GR+P F V FLL+ +T +RH G+ ++ ++ +++
Sbjct: 540 DLVIAVAKTVSGWGGDIGVGRLPAWYFAVAVAGFLLLTLLRTRLRHAGTSILAVSTLLVL 599
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKED 273
P PDL+ISE G LVALV+ + SN NPP FIF QW+ AL+ P H P +
Sbjct: 600 ILPVPRPPDLVISEDGGLVALVETAAMASNRENPPDFIFDQWQRALVLPTHHPPKMLDGP 659
Query: 274 LQEKNQSSLKEIL----------------RSMQPRKFLCIKKSFCVGCHRSDVIVGVLKR 317
+ L + +F C+KK++C + +V ++
Sbjct: 660 AIPPGGEDRRVRLSREQQNEARTAMRAAAAGGETNRFSCVKKAWCTSRLGNGRVVTIIDN 719
Query: 318 KDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFI 377
+ +C +DI++T +R + + L T E L++ GS+E+
Sbjct: 720 AAYLGPACDSADIVVTPVRLRFNSCRSGATLFTGETLRRTGSVELRFADAG-------LE 772
Query: 378 IKSAIENLHFPWTKHR 393
+ +A E L PW + R
Sbjct: 773 VATAFETLSRPWMRQR 788
Score = 81.0 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 82/203 (40%), Gaps = 21/203 (10%)
Query: 3 SITKKYD-PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIP----- 56
+I + D PF + G ARL+PP+GPA P L DF+FS+Y+ GI A G+FY P
Sbjct: 192 AIVRGADTPFEIGDIVTGRARLTPPAGPALPELNDFSFSAYFDGIGANGFFYGAPERVDL 251
Query: 57 -----KMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS----IFLIKHFHCI 107
+SE+ W ++ S I + + + G + +A + +
Sbjct: 252 QAGPQPARSTSETMLEWLYQLRSRIGDRIRSILPGDTGAFAAALVTDERRAISNATTEAL 311
Query: 108 PVYGLIANILAIPILSFVVIPAGLIAILLMILSL-----DNIPFGVMAWGLDIIIHIAHR 162
GL A+I+AI L+ + M+LSL P +A +I A+
Sbjct: 312 RQSGL-AHIVAISGLNMALSAGIFFVGFRMLLSLFPGVAQAYPTKKIAAAGALIAVTAYY 370
Query: 163 ISVAHNEFCIGRIPETSFVTIVV 185
+ + + I V
Sbjct: 371 LISGFGVSAERAFIMMAIMLIAV 393
>gi|150396364|ref|YP_001326831.1| ComEC/Rec2-like protein [Sinorhizobium medicae WSM419]
gi|150027879|gb|ABR59996.1| ComEC/Rec2-related protein [Sinorhizobium medicae WSM419]
Length = 799
Score = 248 bits (634), Expect = 8e-64, Method: Composition-based stats.
Identities = 92/369 (24%), Positives = 169/369 (45%), Gaps = 12/369 (3%)
Query: 26 PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR 85
PS A PG F +F++ ++ + + S S + +
Sbjct: 426 PSAAAGPG-FQMSFAATLALVAGYARWRDQRRKHRESSGSRPGMGAVSSLAVGTVATSLI 484
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
G + +++ HF+ +P YGL+AN+L P+ S +++P L A+LLM L++ P
Sbjct: 485 ------GGMATAVYAAAHFNRLPAYGLVANVLTTPLTSVLIMPFALFAMLLMPFGLEHYP 538
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
+M GLD ++ +A ++ E+ GR+ + F I + L+ +T + G+ ++
Sbjct: 539 LVIMGQGLDWMMAVARYVAALDGEWTTGRMADGPFFLIALGGTLLCVLRTRLALGGAGLV 598
Query: 206 GITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHE 265
+ + ++ P P ++ISE LV LV + + +N S PP FIFSQW+ AL H
Sbjct: 599 ALGVCVIALDPREERPSIVISEDAQLVGLVTADAIATNRSRPPEFIFSQWRRALAVSEHA 658
Query: 266 APHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSC 325
P + + +L S + F C K + CVG R V ++++ +++ L C
Sbjct: 659 VPL--DLPVYAGSDVDTAALLASAKVGVFTCRKGTGCVGRSREGWTVAIVEKAELVPLLC 716
Query: 326 QLSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIEN 384
+D+++ R SL+I+ L++ GS+EI +P + + + +
Sbjct: 717 GHADLVVVASRRPVAACPPGASLIISTRTLRRTGSVEIHAVP--EQAGSPRMQVVGSFSS 774
Query: 385 LHFPWTKHR 393
PW +HR
Sbjct: 775 TERPWQRHR 783
Score = 80.6 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 48/84 (57%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++PF IEG ARLSPPSGPA PGL DF F +Y KG+ A+G+FY P+ + + S
Sbjct: 203 SRHEPFAIGAIIEGKARLSPPSGPALPGLNDFAFGAYVKGLGAVGFFYGAPRALAGAASG 262
Query: 66 NTWTWKKISSIKQSFLNEIRANIG 89
+ ++L +R IG
Sbjct: 263 RDIAETSLGERAAAYLAPVREAIG 286
>gi|325292751|ref|YP_004278615.1| ComEC/Rec2-related protein [Agrobacterium sp. H13-3]
gi|325060604|gb|ADY64295.1| ComEC/Rec2-related protein [Agrobacterium sp. H13-3]
Length = 826
Score = 244 bits (622), Expect = 2e-62, Method: Composition-based stats.
Identities = 89/378 (23%), Positives = 166/378 (43%), Gaps = 21/378 (5%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ +SA ++ W K++ + + + + G
Sbjct: 427 SFQMSFAATIALVSAYAFWSRWRTDRERLFIGRKPAWLKVAGMMGAVIGGVI-TTSLIGG 485
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
S +I+ +HFH + YGL AN+ A+P++S +V+P L+A+LLM LD +M +G+
Sbjct: 486 LSTAIYSAEHFHRVTTYGLFANLAAMPLMSLIVMPFALLAMLLMPFGLDAPFLKIMGYGM 545
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
++I +A+ ++ GR V FLL+ ++ + +G + +
Sbjct: 546 ALVIEVANEVASWGGSAATGRPHGWFIGLASVGFLLLTLLRSRLALLGIPFLLFAFGVSA 605
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKED 273
Y PDLLI E G LVAL++ + + + P SF++ QW+ AL+ P P
Sbjct: 606 VTAYRDLPDLLIHEDGELVALLEDGKVSTTKARPQSFVYGQWQRALLLPEKTVPPGFING 665
Query: 274 LQEKNQSS------------------LKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVL 315
N + + L+ + F C K +CV S + VL
Sbjct: 666 ESTANTAGSDSRSKLSPEDMAVVVREMTAALKDAKAGVFTCRKDIWCVASAASGEWIVVL 725
Query: 316 KRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVK 375
+ +C ++DI++ + R ++ + +LL++ +IL++ GS+EI +
Sbjct: 726 EDGRFAGKACDIADIVVVSRRTSFSQCRSGALLLSRDILRRLGSVEIDFADKREEGVASG 785
Query: 376 FIIKSAIENLHFPWTKHR 393
++AI PW++HR
Sbjct: 786 L--RAAIAGTDRPWSQHR 801
Score = 86.8 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 56/231 (24%), Positives = 87/231 (37%), Gaps = 17/231 (7%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM------- 58
+P T+ G RLSPPSGPA PGL DF F+SY+KGI A G+FY P+
Sbjct: 198 GGGEPIALGATLRGKVRLSPPSGPALPGLNDFAFTSYFKGIGATGFFYKSPQALVSPVGD 257
Query: 59 IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YG 111
+ W ++ ++ + IR IG A A+ + I
Sbjct: 258 ARPDKGWLEWADMRLYGLRSAIAERIRTTIGGDAGAFAASIITDERQAISAETMEALRLS 317
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
+A+I+AI L+ + L + SL P W + I A +
Sbjct: 318 GLAHIVAISGLNMALASGIFFVGLRLAFSL--FPAFAQRWPVKKIAAFAALLMTLAYYLI 375
Query: 172 IG-RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
G + ++ L+ V + ++ I II+ F+ P
Sbjct: 376 SGFAVSAERAWLMMSVMLIAVLFDQPSLSLRNVAISALIILAFSPSEIMGP 426
>gi|227821911|ref|YP_002825881.1| DNA uptake protein [Sinorhizobium fredii NGR234]
gi|227340910|gb|ACP25128.1| DNA uptake protein [Sinorhizobium fredii NGR234]
Length = 815
Score = 240 bits (611), Expect = 4e-61, Method: Composition-based stats.
Identities = 96/390 (24%), Positives = 170/390 (43%), Gaps = 35/390 (8%)
Query: 26 PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR 85
PS A PG F +F++ ++ + ++S ++ + + +
Sbjct: 423 PSAVAGPG-FQMSFAATLALVAGYARWRDHRLRNADAKSS------RLGQVSGPVVATV- 474
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
G + +++ HFH +P YGL+AN+L P++ +++P GL A+LLM L++ P
Sbjct: 475 -ATSLIGGLATAVYAAAHFHRLPAYGLLANVLTTPLIGILIMPFGLFAMLLMPFGLEHYP 533
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
VM GLD ++ +A ++ E+ GRI T F + +L+ +T + +G+ +I
Sbjct: 534 LMVMGQGLDWMLGVARYVATLDGEWVTGRIGVTGFFLLAFGGVLLCVLRTRLAFLGAALI 593
Query: 206 GITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHE 265
+ + + P + ISE G LV L+ + + +N S PP FIFSQW+ AL H
Sbjct: 594 LLGGSSIALERQAVRPSITISEDGQLVGLIVGDAIGTNKSRPPEFIFSQWRRALALDSHV 653
Query: 266 APHVQKEDLQEKNQSSLKEILRSM---------------------QPRKFLCIKKSFCVG 304
AP + N + S +P F C K +CVG
Sbjct: 654 APVETAAGGRSTNDVERRPPRNSAGTQPVDARASAAEAATALTAAKPGNFSCRKGEWCVG 713
Query: 305 CHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVS-LLITPEILQKQGSLEIT 363
R V V+ ++ + C D+LI R + L++T L++ G++EI
Sbjct: 714 RSREGWAVAVVDVPEVFAVLCGRVDLLIAATRRTLPACSSGKSLVVTGATLRQTGAIEIY 773
Query: 364 IIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
++ + I ++ + PW +HR
Sbjct: 774 ----ADAAAPERMRIVTSFPSTQRPWQRHR 799
Score = 88.3 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/98 (36%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+++PFP + IEG RLSPPSGPA PGL DF F +Y+KG+ A+G+FY P+ +
Sbjct: 205 SRHEPFPIGSAIEGKVRLSPPSGPALPGLNDFAFDAYFKGVGAVGFFYGAPRRPGEGDGS 264
Query: 66 NTWT---WKKISSIKQSFLNEIRANIGTYGSASASIFL 100
+ + ++++++++ N IR+ IG A A+ +
Sbjct: 265 LSLSLQMAARLAALRETVGNRIRSAIGGDTGAIAAALV 302
>gi|153009374|ref|YP_001370589.1| ComEC/Rec2-like protein [Ochrobactrum anthropi ATCC 49188]
gi|151561262|gb|ABS14760.1| ComEC/Rec2-related protein [Ochrobactrum anthropi ATCC 49188]
Length = 858
Score = 239 bits (609), Expect = 6e-61, Method: Composition-based stats.
Identities = 78/387 (20%), Positives = 147/387 (37%), Gaps = 44/387 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +FS+ I+ ++ + T + + A
Sbjct: 452 SFQMSFSATAALIAGYAWWSERNAIRQVGTEERGKTAYSFAGKVLKPITA-AAATSLIAG 510
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
++ IF HF+ +GL+ N+LA P+++ +V+P + ++LM L LD +P +M WG+
Sbjct: 511 LASGIFAAYHFNNTAPFGLVGNVLAEPVIALLVMPFAVFGLVLMPLQLDWVPLQIMGWGI 570
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
+ HIA ++ + G +P + V + +L++ T ++ + I + +
Sbjct: 571 FAVRHIAAFVAKWSPDGNPGAMPALTIVLWAIALVLVIVLSTRLKALALPFIVLGFAVFV 630
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
P+ PD++ISE LV + + N S F WK+A + AP K
Sbjct: 631 REPF---PDIVISEDAKLVGVRLADGKFAVNRSRQSQFTIDNWKTAYLVEEFIAPPSGKN 687
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
+ F C + C R + M+ ++C + D++I
Sbjct: 688 KKRTDGD-------------GFEC-EDGLCTISLRDGRTLAYTADVAMLEIACNIGDVVI 733
Query: 333 TTIRDINTKLCNVSLL-ITPEILQKQGSLEITIIPPSNDNDKVKFI-------------- 377
+ + ++L I+ + L +G++EI + + N +K I
Sbjct: 734 LAVSGKDPACGRSTILSISKQELALKGAVEIRLGERPDKNRSLKAISGDTYDVAKPEMSQ 793
Query: 378 ----------IKSAIENLHFPWTKHRI 394
I AI+ PW HRI
Sbjct: 794 QTSELQPEDRITYAIDAPSRPWHLHRI 820
Score = 74.8 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 9/138 (6%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW-- 70
+ G RL PSGP PG +DF+F +Y+ GI A G+F PK+ S+
Sbjct: 235 IGGGLAGFVRLRIPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKVATVSQPDELTAEIS 294
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPILS 123
+ I+ ++ I IG + AS + I +A+IL+I L
Sbjct: 295 QWIAMLRVRVSERIEEVIGGEDGSVASALVAGTRAGISERTNEDLRKAGLAHILSISGLH 354
Query: 124 FVVIPAGLIAILLMILSL 141
+ ++ L + +L
Sbjct: 355 MALAAGVIMLTLRSVFAL 372
>gi|240850323|ref|YP_002971716.1| ComEC/Rec2-related protein [Bartonella grahamii as4aup]
gi|240267446|gb|ACS51034.1| ComEC/Rec2-related protein [Bartonella grahamii as4aup]
Length = 754
Score = 236 bits (602), Expect = 5e-60, Method: Composition-based stats.
Identities = 89/379 (23%), Positives = 155/379 (40%), Gaps = 36/379 (9%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+I G+ L+ F +FS+ I+ + +S ++ ++ + +
Sbjct: 408 SIAGLITLAMTPHEILGPSFQMSFSATAALIAFFDW-WSGRSFFRKRKTTPSYVGGGVIN 466
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ A+ GS ++ I+ HF +I+N A+P++S VIP GLIA+L
Sbjct: 467 FAFLSMLSTCASSLVAGS-ASGIYAAYHFSNTASLSIISNAFALPVISIFVIPFGLIAVL 525
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
M+ + +P +M +G+D++I IAH I + G +P ++ V + + + + FCKT
Sbjct: 526 AMLGGFEWLPLQIMGFGVDLVIKIAHAIKAISPDLNPGFMPLSALVLLSIGLVGLTFCKT 585
Query: 196 NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
IR ++ I I I L+I++ LV ++ L + + F S W
Sbjct: 586 PIRLFFNLFILAGISICVMHS---PVQLIIADNMRLVGVIYDKKLYIDRYHISKFTTSIW 642
Query: 256 KSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVL 315
K + P L +F+C C + + V VL
Sbjct: 643 KKSFRVNETIKPTKYGPSL----------------HGQFIC-DYHVCTSLLENGLKVVVL 685
Query: 316 KRKDMIRLSCQLSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITIIPPSNDNDKV 374
+R+ C +DILI T N ++ TP+ L +GS+ +T K
Sbjct: 686 QRET---DQCVEADILIQTFVMRNPTCYKKAKIIFTPQQLLSRGSVMMT---------KG 733
Query: 375 KFIIKSAIENLHFPWTKHR 393
II S++ H PW HR
Sbjct: 734 GDIIWSSL-GFHRPWNMHR 751
Score = 66.7 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 85/239 (35%), Gaps = 14/239 (5%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
+ G ++ SGP PG +DF+F +Y+K I A G + P+ I S+ +
Sbjct: 206 GLEIGDGLYGKVKIRAFSGPVRPGGYDFSFHNYFKRIGAQGVYLGKPRKISVSQPDGIFA 265
Query: 70 --WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP--------VYGLIANILAI 119
+KI +++ IR + + A+ + I GL A+IL+I
Sbjct: 266 IILQKIENLRTKMTQRIRIALEGEKGSVAAALITGQRAGISNETNEALRTAGL-AHILSI 324
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
L ++ ++ + L+ F +A I+ + I
Sbjct: 325 SGLHMALLSGIVLLSIRSFLAF-FPVFSSYYSSKKFAAIVAFMITAFYLLLSGLAISAQR 383
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP--DLLISEKGNLVALVD 236
++ L+ + C + + + I I + T P + S L+A D
Sbjct: 384 SFVMIAVMLVAILCNRSAITMRNFSIAGLITLAMTPHEILGPSFQMSFSATAALIAFFD 442
>gi|49475428|ref|YP_033469.1| DNA uptake protein [Bartonella henselae str. Houston-1]
gi|49238234|emb|CAF27444.1| DNA uptake protein [Bartonella henselae str. Houston-1]
Length = 772
Score = 235 bits (600), Expect = 7e-60, Method: Composition-based stats.
Identities = 85/384 (22%), Positives = 163/384 (42%), Gaps = 46/384 (11%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+I G+ L+ F +FS+ I+ + ++ ++ +++ +
Sbjct: 408 SIAGLITLAIMPHEILGPSFQMSFSATAALIAFFDW-WNGRSFFRKRKTTSSYVGAGVIY 466
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ I A+ G ++ I+ + HF I + +I+N LA+PI+S ++IP GLIA
Sbjct: 467 FAFLSILSICASSFVAG-IASGIYAVYHFSNIAFFSIISNALALPIVSILIIPFGLIAAF 525
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
M L+ P +M +G+ +I IAH ++ + G +P ++ V + + ++FCKT
Sbjct: 526 AMCWGLEWFPLQIMGFGVGFVIKIAHAVTSISPDLNPGFMPLSALVLFSIGLVGLIFCKT 585
Query: 196 NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
++R S I + I + + L+I+E +V ++ + L ++ F S W
Sbjct: 586 SLRFFFSFFILVGIYVCLVYS---PVQLIIAENMRVVGVISERKLYIDHYRISKFTTSIW 642
Query: 256 KSAL-----ITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDV 310
K + I P P ++ F+C + CV + +
Sbjct: 643 KKSFRVNEIIKPTKYGPSFNEQ---------------------FVCDNHA-CVSLLANGL 680
Query: 311 IVGVLKRKDMIRLSCQLSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITIIPPSN 369
V VL+ + C +DI+I T + + ++ TP+ L +GS+ +T
Sbjct: 681 KVIVLRGE---IDQCVEADIIIKTFSMSDPTCNKKMKIIFTPQQLLSRGSVMMT------ 731
Query: 370 DNDKVKFIIKSAIENLHFPWTKHR 393
K II S++ + PW HR
Sbjct: 732 ---KSGEIIWSSV-GFYRPWNNHR 751
Score = 68.7 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 53/248 (21%), Positives = 92/248 (37%), Gaps = 16/248 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS + + G ++ SGP PG +DF+F +Y+KGI A G + P I
Sbjct: 198 LSARRLPHGLAIGDGLYGKVKIRALSGPVHPGGYDFSFHNYFKGIGAQGIYLGKPIKISV 257
Query: 62 SE--SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP--------VYG 111
S+ S +KI +++ + IR I + A+ + I G
Sbjct: 258 SQPDSILAIVLQKIENLRTNMTQRIRMTIDGEKGSVAAALITGQRGGISNDINEALRTAG 317
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
L A+IL+I L ++ + I+ L+L F IA I+ +
Sbjct: 318 L-AHILSISGLHMTLLSGIVFMIIRSFLAL-FPVFSSYYSAKKFAAIIALMITAFYLLLS 375
Query: 172 IGRIPETSFVTIVVEFLLMVFCKTN---IRHIGSIMIGITIIILFTFPYSFSPDLLISEK 228
+ ++ L+ V + +R+ + IT+ I+ S + S
Sbjct: 376 GIAVSAQRSFVMIAVMLIAVLFNRSAVTMRNFSIAGL-ITLAIMPHEILGPSFQMSFSAT 434
Query: 229 GNLVALVD 236
L+A D
Sbjct: 435 AALIAFFD 442
>gi|319899025|ref|YP_004159118.1| Competence protein [Bartonella clarridgeiae 73]
gi|319402989|emb|CBI76544.1| Competence protein [Bartonella clarridgeiae 73]
Length = 757
Score = 234 bits (596), Expect = 2e-59, Method: Composition-based stats.
Identities = 77/380 (20%), Positives = 150/380 (39%), Gaps = 38/380 (10%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
I G+ ++ F +FS+ I++ + +S + Y + +++ KI
Sbjct: 408 AIAGLITMAVSPHEILGPSFQMSFSATAALIASFCW-WSDGRFSYKGNTVSSYIKGKIFR 466
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ ++ I+ HF + + G+I+N LA+PI+S +IP GLI+
Sbjct: 467 FV-FLSIVLTCMSSLIAGFASGIYAAYHFSNVALLGVISNTLALPIVSIFIIPFGLISAF 525
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
M L+ +P +M +G ++I IA+ + G IP ++ + + + + + F KT
Sbjct: 526 AMFFGLEWLPLKIMGFGTSLMIKIAYAVKAISPVLNPGFIPLSALILLSIGLVGLTFLKT 585
Query: 196 NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
IR S I I++ L+I++ +V +++ + L + +P F S W
Sbjct: 586 AIRFFFSFFILGGILVCM---MQSPVQLIIADNMKIVGVLNNDILYIDRYHPSKFTTSIW 642
Query: 256 KSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVL 315
+ + P L + F+C + C + + +L
Sbjct: 643 EKSFRINKTIKPTKVGPSLNGQ----------------FIC-DDNICTTLLENGFKIAIL 685
Query: 316 KRKDMIRLSCQLSDILITTIRDINTKLCNV--SLLITPEILQKQGSLEITIIPPSNDNDK 373
R+ C +DI+I N + CN ++ TP+ L +GS+ +T
Sbjct: 686 YRET---DHCVKADIIIRKFTTSN-QTCNAINAITFTPQQLLSRGSVILTKNKN------ 735
Query: 374 VKFIIKSAIENLHFPWTKHR 393
+ + PW HR
Sbjct: 736 ----TFWSSAGFYRPWNIHR 751
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/235 (16%), Positives = 79/235 (33%), Gaps = 12/235 (5%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS--SESHNT 67
+ G +L SG PG +DF+F +Y+K I A G++ P I +
Sbjct: 206 GLAPGDGLYGKVKLRALSGAIRPGSYDFSFHNYFKRIGAQGFYLGKPTKILVFQPNTMLG 265
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIP 120
+KI +++ +I + ++ + I +A+IL+I
Sbjct: 266 RILQKIENLRMQMTQKIIKVVNGEEGRVSAALITGQRGGISNNTNEALRIAGLAHILSIS 325
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
L ++ + I+ + + + I A ++ + I
Sbjct: 326 GLHMALLSGMVFIIVRSFFAFFPVFSSYYSAKKFAAIA-ALIVTAFYLVLSGANIAAQRS 384
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP--DLLISEKGNLVA 233
+V L+ + C + + + I I + + P + S L+A
Sbjct: 385 FLMVAVMLIAILCNRSAMTMRNFAIAGLITMAVSPHEILGPSFQMSFSATAALIA 439
>gi|116251991|ref|YP_767829.1| transmembrane DNA uptake competence-related protein [Rhizobium
leguminosarum bv. viciae 3841]
gi|115256639|emb|CAK07727.1| putative transmembrane DNA uptake competence-related protein
[Rhizobium leguminosarum bv. viciae 3841]
Length = 830
Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats.
Identities = 106/376 (28%), Positives = 189/376 (50%), Gaps = 27/376 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ +S + ++ ++ ++ F + G
Sbjct: 444 SFQMSFAATLALVSGY-QLWKDRRVRENAFLKLPVIRPFVT--VAGFFGGVF-LTSLIGG 499
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
S ++F I+HFH + YGL AN+ +PI+SF+++PAGL+A+LLM LD +P+ V+ +GL
Sbjct: 500 LSTALFSIEHFHRLTAYGLPANLATMPIISFIIMPAGLLAMLLMPFGLDVLPWKVVGFGL 559
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
D++I +A +S +GR+P F V FLL+ +T +RH+G+ +I + +IL
Sbjct: 560 DLVIAVAKTVSGWDGNIDVGRLPAWYFAVAVAGFLLLTLLRTRLRHVGTSIIAVATLILL 619
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE- 272
P PDL+ISE G+LVA+V+ + SN PP FIF QW+ AL+ P H+ P +
Sbjct: 620 LLPGPRPPDLVISEDGSLVAVVEAAAMASNRERPPDFIFDQWQRALVLPRHDPPKMLDGP 679
Query: 273 ---------------DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKR 317
D Q + +++++ + +F C+KK++C+ + +V V+
Sbjct: 680 AISPEGEDRRVRLSRDQQNEARTAMRTATAAGDTNRFSCVKKAWCISRLGNGQVVTVIDN 739
Query: 318 KDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFI 377
+ +C +DI++T++R + + L T E L++ GS+E+
Sbjct: 740 AAYLGPACDAADIVVTSVRLRFNSCRSGATLFTGETLRRTGSIELRFTDTG-------LE 792
Query: 378 IKSAIENLHFPWTKHR 393
+ +A + L PW +HR
Sbjct: 793 VATAFDALSRPWMRHR 808
Score = 80.6 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 47/202 (23%), Positives = 79/202 (39%), Gaps = 19/202 (9%)
Query: 3 SITKKYDP-FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM--- 58
+I + D F I G ARL+PP+GPA P L DF+F +Y+ GI A G+FY P
Sbjct: 212 AIARGADAAFEIGDIITGRARLTPPAGPALPELNDFSFGAYFDGIGANGFFYGAPTKVDA 271
Query: 59 ---IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV------ 109
++ S + + ++ + IR+ + A A+ + I
Sbjct: 272 QVGPQAARSTAETLLEGLYRLRSGIGDRIRSILPGDTGAFAAALVTDERRAISNETTEAL 331
Query: 110 -YGLIANILAIPILSFVVIPAGLIAILLMILSL-----DNIPFGVMAWGLDIIIHIAHRI 163
+A+I+AI L+ + M+LSL + P +A +I A+ +
Sbjct: 332 RQSGLAHIIAISGLNMALSAGIFFVGFRMLLSLIPGIAEAYPTKKIAAAGALIAVTAYFL 391
Query: 164 SVAHNEFCIGRIPETSFVTIVV 185
+ + I V
Sbjct: 392 ISGFAVSAERAFIMMAIMLIAV 413
>gi|319407357|emb|CBI81004.1| Competence protein [Bartonella sp. 1-1C]
Length = 754
Score = 233 bits (593), Expect = 5e-59, Method: Composition-based stats.
Identities = 71/379 (18%), Positives = 149/379 (39%), Gaps = 36/379 (9%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
I G+ ++ F +FS+ I+A ++ + + + K +
Sbjct: 408 AIAGLVTVAISPHEILEPSFQMSFSATVALIAAFSWWSEGYCSCKGNTAPSYIGGKVLRF 467
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ S ++ +++ +++ I+ HF + + G+I+N LA+PI+S ++P GL++
Sbjct: 468 VFLSVVSTCMSSLV--AGSASGIYAAYHFSNVALLGVISNALALPIVSIFIMPFGLLSAF 525
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
M L+ P +M +G +++I IA+ I G IP ++ + + + + + F KT
Sbjct: 526 SMFFGLEWWPLQIMGFGTNLMIKIAYAIQAISPVLNPGFIPLSALILLSIGLVGLTFLKT 585
Query: 196 NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
IR I I++ L+I++ +V +++ L + +P F S W
Sbjct: 586 AIRLFFGFFILGGILVCM---MQSPVQLIIADNMKIVGVLNDKILYVDRYHPSKFTISLW 642
Query: 256 KSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVL 315
+ + P L+ + F+C C + + +L
Sbjct: 643 EKSFRINKTIKPTKIGPSLKGQ----------------FIC-DDKICTTLLENGFKIAIL 685
Query: 316 KRKDMIRLSCQLSDILITTIRDINTKLCNV-SLLITPEILQKQGSLEITIIPPSNDNDKV 374
+ C +DI+I N ++ ++ T + L +GS+ +T
Sbjct: 686 YGET---DHCVKADIIIKKHATSNETCDSINAITFTSQQLLSRGSVILTKNKN------- 735
Query: 375 KFIIKSAIENLHFPWTKHR 393
I + + PW HR
Sbjct: 736 ---ILWSSAGFYRPWNTHR 751
Score = 66.7 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 76/220 (34%), Gaps = 16/220 (7%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS--SESHNT 67
+ G +L SG PG +DF+F +Y+K I A G++ PK I +
Sbjct: 206 GLTPGDGLYGKVKLRALSGAIRPGSYDFSFHNYFKRIGAQGFYLGKPKKISVFQPDMMLG 265
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIP 120
+KI +++ ++ +G G ++ + I +A+IL+I
Sbjct: 266 KVLQKIENLRMQMTEKVIKTVGGEGGKVSAALITGQRGGISHNTSEALRIAGLAHILSIS 325
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR-ISVAHNEFCIGRIPETS 179
L ++ + I+ + + + + IA ++ + I
Sbjct: 326 GLHMALLSGMVFIIIRSFFAFFPVFSSY--YSVKKFAAIAALIVTAFYLILSGANIAAQR 383
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
+V L+ + C + M I L T S
Sbjct: 384 SFLMVAVMLVAILCNRS----AVTMRNFAIAGLVTVAISP 419
>gi|159184742|ref|NP_354400.2| hypothetical protein Atu1393 [Agrobacterium tumefaciens str. C58]
gi|159140030|gb|AAK87185.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 809
Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats.
Identities = 92/379 (24%), Positives = 163/379 (43%), Gaps = 23/379 (6%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ ++A + W ++ + + + G
Sbjct: 410 SFQMSFAATIALVAAYAAWSRWRTDRERLFIGRKPAWMTVAGTAGAVIGGVV-TTSLIGG 468
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
S +I+ ++HF + YGL AN+ A+P++S VV+P GLIA+LLM LD VM +G+
Sbjct: 469 LSTAIYSVEHFQRVTTYGLFANLAAMPLMSLVVMPFGLIAMLLMPFGLDAPFLKVMGYGM 528
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
++I +A ++ GR V FLL+ +T + +G + + +
Sbjct: 529 ALVIEVAQEVASWGGSAATGRPHGWFIGVASVGFLLLTLLRTRLALLGVPPLLLAFGLSG 588
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFH--------- 264
PDLLI E+G LVAL+D+ + + + P FI+ QW+ AL+ P
Sbjct: 589 AVAQRSLPDLLIHEEGKLVALLDEGRVYTTKTRPQGFIYEQWQRALLLPEKPLSPVLLKT 648
Query: 265 ----------EAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGV 314
+ ED++ + + LR P F C +C +S + V
Sbjct: 649 GVPATTIALSAKSKLAPEDMKAVAR-EMVTTLRDAAPGVFTCRTGIWCAARAKSGEFIIV 707
Query: 315 LKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKV 374
L+ +C ++DI+I + R T+ + +LL+ +IL++ GS+EI
Sbjct: 708 LEDGRFAGKACDIADIVIVSRRTSFTQCRSGALLLNRDILRRIGSVEINFAGSDQAGVVG 767
Query: 375 KFIIKSAIENLHFPWTKHR 393
+ ++A PW+ HR
Sbjct: 768 RM--RAATAGTDRPWSDHR 784
Score = 86.0 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 53/220 (24%), Positives = 88/220 (40%), Gaps = 17/220 (7%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE-- 63
+P TI G ARLS PSGPA PGL DF F+SY+KGI A G+FY P+ + + +
Sbjct: 183 GGGEPAALGATIRGKARLSLPSGPALPGLNDFAFASYFKGIGATGFFYKPPQTVTAPDID 242
Query: 64 ---SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLI 113
W ++ ++ + IR IG A A+ + I +
Sbjct: 243 AKKDWLEWADMRLYGLRTAIAERIRNTIGGDAGAFAASIVTDERQAISAGTMEALRLSGL 302
Query: 114 ANILAIPILSF-----VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
A+I+AI L+ + +A L P M+ +++ +A+ +
Sbjct: 303 AHIVAISGLNMALASGIFFVGLRLAFSLFPAFAQRWPVKKMSAFAALLMTLAYYLISGFA 362
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGIT 208
TS + I V F N+ +++ ++
Sbjct: 363 VSAERAWLMTSVMLIAVLFDQPSLSLRNVALSALVILALS 402
>gi|319404353|emb|CBI77953.1| Competence protein [Bartonella rochalimae ATCC BAA-1498]
Length = 754
Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats.
Identities = 70/379 (18%), Positives = 148/379 (39%), Gaps = 36/379 (9%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
I G+ ++ F +FS+ I+A ++ + + + K +
Sbjct: 408 AIAGLVTVAISPHEILEPSFQMSFSATVALIAAFSWWSDGYCSCKGNTAPSYIGGKVLRF 467
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ S ++ +++ +++ I+ HF + + G+I+N LA+PI+S ++P GL++
Sbjct: 468 VFLSVVSTCMSSLV--AGSASGIYAAYHFSNVALLGVISNALALPIVSIFIMPFGLLSAF 525
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
M L+ P +M +G +++I IA+ I G IP ++ + + + + + F KT
Sbjct: 526 SMFFGLEWWPLQIMGFGTNLMIKIAYAIQAISPVLNPGFIPLSALILLSIGLVGLTFLKT 585
Query: 196 NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
IR I I++ L+I++ +V +++ L + +P F S W
Sbjct: 586 AIRLFFVFFILAGILVCM---MQSPVQLIIADDMKIVGVLNDKILYVDRYHPSKFTISLW 642
Query: 256 KSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVL 315
+ + P L+ + F+C C + + +L
Sbjct: 643 EKSFRINKTIKPTKIGPSLKGQ----------------FIC-DDKICTTLLENGFKIAIL 685
Query: 316 KRKDMIRLSCQLSDILITTIRDINTKLCNV-SLLITPEILQKQGSLEITIIPPSNDNDKV 374
+ C +DI+I N ++ ++ T + L +GS+ +T
Sbjct: 686 YGET---DHCIKADIIIKKHATSNETCDSINAITFTSQQLLSRGSVILTKNKS------- 735
Query: 375 KFIIKSAIENLHFPWTKHR 393
+ + PW HR
Sbjct: 736 ---TLWSSAGFYRPWNIHR 751
Score = 68.7 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 77/221 (34%), Gaps = 16/221 (7%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS--SESHN 66
D + G +L SG PG +DF+F +Y+K I A G++ PK I +
Sbjct: 205 DGLTPGDGLYGKVKLRALSGAIRPGSYDFSFHNYFKRIGAQGFYLGKPKKISVLQPDMML 264
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAI 119
+KI +++ +I +G G ++ + I +A+IL+I
Sbjct: 265 GKVLQKIENLRMQMTEKIVKAVGGEGGRVSAALITGQRGGISHNTNEALRIAGLAHILSI 324
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR-ISVAHNEFCIGRIPET 178
L ++ + I+ + + + + IA ++ + I
Sbjct: 325 SGLHMALLSGMVFIIIRSFFAFFPVFSSY--YSVKKFAAIAALIVTAFYLILSGANIAAQ 382
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
+V L+ + C + M I L T S
Sbjct: 383 RSFLMVAVMLVAILCNRS----AVTMRNFAIAGLVTVAISP 419
>gi|241204518|ref|YP_002975614.1| ComEC/Rec2-related protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240858408|gb|ACS56075.1| ComEC/Rec2-related protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 754
Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats.
Identities = 111/387 (28%), Positives = 193/387 (49%), Gaps = 28/387 (7%)
Query: 23 LSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLN 82
L PS P F +F++ +S + ++ ++ ++ F
Sbjct: 358 LISPSEVLGP-SFQMSFAATLALVSGY-QLWKDRRVRENAFLKLPIIRPVVT--VAGFFG 413
Query: 83 EIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD 142
+ G S ++F I+HFH + YGL AN+ +PI+SF+V+PAGL+A+LLM LD
Sbjct: 414 GVF-LTSLIGGFSTALFSIEHFHRLTAYGLPANLATMPIISFIVMPAGLLAMLLMPFGLD 472
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
+P+ V+ +GLD++I +A +S +GR+P F V FLL+ +T +RHIG+
Sbjct: 473 VLPWKVVGFGLDLVIAVAKTVSGWDGNIDVGRLPAWYFAVAVAGFLLLTLLRTRLRHIGT 532
Query: 203 IMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITP 262
+I + +IL P PDL+ISE G+LVA+V+ + SN PP FIF QW+ AL+ P
Sbjct: 533 SIIAVATLILLLLPVPRPPDLVISEDGSLVAVVEAAAMASNRERPPDFIFDQWQRALVLP 592
Query: 263 FHEAPHVQKE----------------DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCH 306
H+ P + D Q + +++++ + + +F C+K+++C
Sbjct: 593 RHDPPKMLDGPAIPQVGEDRRVKLSRDQQNEARTAMRAAAAAGEANRFSCVKRAWCASRL 652
Query: 307 RSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIP 366
+ +V V+ + +C +DI++T++R + + L T E L++ GS+E+
Sbjct: 653 GNGRVVAVIDNAAYLGPACDAADIIVTSVRLRFNSCRSGATLFTGETLRRTGSIELRFAD 712
Query: 367 PSNDNDKVKFIIKSAIENLHFPWTKHR 393
+ +A + L PW +HR
Sbjct: 713 AG-------LEVATAFDALSRPWMRHR 732
Score = 81.4 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/225 (23%), Positives = 91/225 (40%), Gaps = 36/225 (16%)
Query: 3 SITKKYDP-FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM--- 58
+I + D F I G ARL+PP+GPA P L DF+FS+Y+ GI A G+FY P
Sbjct: 136 AIARGADAAFEIGDIITGRARLTPPAGPALPELNDFSFSAYFDGIGANGFFYGAPTKVDA 195
Query: 59 ---IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY----- 110
++ S + + ++ + IR+ + A A+ + I
Sbjct: 196 QAGPQAARSAVEALLEGLYRLRSGIGDRIRSILPGDTGAFAAALVTDERRAISDATTEAL 255
Query: 111 --GLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
+A+I+AI L+ + G+ G +++ I I+ A+
Sbjct: 256 RQSGLAHIIAISGLNM------------------ALSAGIFFVGFRMLLSIFAGIAEAYP 297
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
I + + + FL+ F + R IM+ I +I +F
Sbjct: 298 TKKIAA--AGALIAVTAYFLISGFAVSAER--AFIMMAIMLIAVF 338
>gi|163868120|ref|YP_001609324.1| putative DNA uptake protein [Bartonella tribocorum CIP 105476]
gi|161017771|emb|CAK01329.1| putative DNA uptake protein [Bartonella tribocorum CIP 105476]
Length = 769
Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats.
Identities = 88/384 (22%), Positives = 154/384 (40%), Gaps = 40/384 (10%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
F I R GP F +FS+ I+ + +S + + +++
Sbjct: 407 FSIAGLITLAIRPHEILGP----SFQMSFSATAALIAFFDW-WSGRSIFRKRKIVSSYVR 461
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ + + + A+ GS ++ I+ HF +I+N A+PI+S +VIP G
Sbjct: 462 EGVINFAFLSILSTCASSFVAGS-ASGIYAAYHFSNTASLSIISNAFALPIISILVIPFG 520
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
LIA+L M+ + +P +M +G+D++I IAH I + G +P ++ V + + + +
Sbjct: 521 LIAVLAMLGGFEWLPLQIMGFGVDLVIKIAHAIKAISPDLNPGFMPLSALVLLSIGLVGL 580
Query: 191 VFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
FCKT IR S+ I I L+I++ LV ++ L + + F
Sbjct: 581 TFCKTPIRLFFSLFILAGFSICIMHS---PVQLIIADNMRLVGVIHDKKLYIDRYHHSKF 637
Query: 251 IFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDV 310
S W+ + P +F+C C + +
Sbjct: 638 TTSIWEKSFRLNETIKPTRYG----------------PSFHGQFIC-DHDVCTSLLENGL 680
Query: 311 IVGVLKRKDMIRLSCQLSDILITTIRDINTKLC-NVSLLITPEILQKQGSLEITIIPPSN 369
V VL+ + C +DILI T N ++ TP+ L +GS+ +T
Sbjct: 681 KVIVLRGE---VDHCIEADILIQTFLVHNQTCHKKAKIIFTPQQLLSRGSVMMT------ 731
Query: 370 DNDKVKFIIKSAIENLHFPWTKHR 393
K + I S++ H PW HR
Sbjct: 732 ---KSRDITWSSL-GFHRPWNMHR 751
Score = 63.7 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/238 (18%), Positives = 82/238 (34%), Gaps = 12/238 (5%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE--SHNT 67
+ G +L SG PG +DF+F +Y+KGI A G + PK I S+
Sbjct: 206 GLAIGDGLYGKVKLRAFSGSVRPGGYDFSFHNYFKGIGAQGVYLGKPKKISVSQPDGILA 265
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIP 120
+K +++ IR + + A+ + I +A+IL+I
Sbjct: 266 IILQKTENLRMKMTQRIRFALEGEKGSVAAALITGQRAGISSETNEALRKAGLAHILSIS 325
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
L ++ ++ + L+ F + +A I+ + I
Sbjct: 326 GLHMALLSGLVLLSIRSFLAF-FPIFSSYYSSKKLAAIVAFMITAFYLLLSGLAISAQRS 384
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP--DLLISEKGNLVALVD 236
++ L+ + C + + + I I + P + S L+A D
Sbjct: 385 FVMIAVMLVAILCNRSAVTMRNFSIAGLITLAIRPHEILGPSFQMSFSATAALIAFFD 442
>gi|49474278|ref|YP_032320.1| DNA uptake protein [Bartonella quintana str. Toulouse]
gi|49239782|emb|CAF26172.1| DNA uptake protein [Bartonella quintana str. Toulouse]
Length = 752
Score = 230 bits (586), Expect = 3e-58, Method: Composition-based stats.
Identities = 90/385 (23%), Positives = 162/385 (42%), Gaps = 48/385 (12%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
I G+ L+ F +FS+ I++ + +S ++ ++ ++ +I
Sbjct: 407 AIAGLIILAITPHEILGPSFQMSFSATAALIASFDW-WSRRVSSHTRKATPSYVGGRIIH 465
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ A+ G A++ ++ HF I G+I+N LA+P++S ++IP GLIA+
Sbjct: 466 FAFLSVTSTCASSFVAG-AASGVYAAYHFSNIAFLGVISNALALPVISILIIPFGLIAVF 524
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
M LSL+ +P +M G+D++I IAH + G +P ++ V + ++FCKT
Sbjct: 525 AMFLSLEWLPLQIMGLGVDLVIKIAHAVRAVSPALNPGFMPLSALVFFSGGLVGLIFCKT 584
Query: 196 NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
+IR S+ I + I I L+I++ NLV +++ L ++ F S W
Sbjct: 585 SIRFFFSLFILVGICICLMHS---PVQLIIADNINLVGVINGKKLYTDRYRISKFTTSIW 641
Query: 256 KSAL-----ITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDV 310
+ + I P P + F+C C +
Sbjct: 642 EKSFRVNETIKPTKYGPSFNGQ---------------------FVC-DDHICSSLSENGF 679
Query: 311 IVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVS--LLITPEILQKQGSLEITIIPPS 368
V VL K C +D+++ T +N + CN + TP+ L +GS+ +T
Sbjct: 680 RVVVLHGK---IDQCVEADVIVKTF-TMNDQTCNRKTQITFTPQQLLSRGSVMMT----- 730
Query: 369 NDNDKVKFIIKSAIENLHFPWTKHR 393
+ I + + H PW HR
Sbjct: 731 -----KRGDIIWSSKGFHRPWNMHR 750
Score = 71.0 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 95/243 (39%), Gaps = 14/243 (5%)
Query: 4 ITKKYDPF--PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
++ K+ P+ + G ++ SGP PG +DF+F +Y+KGI A G + P I
Sbjct: 197 LSAKHLPYGLAIGDGLYGKVKIRALSGPVRPGGYDFSFHNYFKGIGAQGIYLGKPMKISV 256
Query: 62 SESHNTWT--WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGL 112
+ + +KI +++ + +IR IG + A+ + I
Sbjct: 257 PPPYTMLSILLQKIENLRMNMTQKIRMAIGEEKGSVAAALITGQRGGISDNTNEALRISG 316
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI 172
+A++L+I L ++ + ++ + L+L F +A I+ +
Sbjct: 317 LAHVLSISGLHMALLSSMVLVSIRSFLAL-FPVFSSYHSTKKFAAIVALIITAFYLVLSG 375
Query: 173 GRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP--DLLISEKGN 230
G + ++ L+ V C + + + I II+ T P + S
Sbjct: 376 GAVSAQRSFVMITVMLVAVLCNRSAITMRNFAIAGLIILAITPHEILGPSFQMSFSATAA 435
Query: 231 LVA 233
L+A
Sbjct: 436 LIA 438
>gi|239832033|ref|ZP_04680362.1| ComEC/Rec2-related protein [Ochrobactrum intermedium LMG 3301]
gi|239824300|gb|EEQ95868.1| ComEC/Rec2-related protein [Ochrobactrum intermedium LMG 3301]
Length = 817
Score = 230 bits (585), Expect = 4e-58, Method: Composition-based stats.
Identities = 74/393 (18%), Positives = 151/393 (38%), Gaps = 56/393 (14%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR------AN 87
F +FS+ I+ ++ ++ +K+ + F+ I A
Sbjct: 411 SFQMSFSATAALIAGYAWWSE-------RNANRRVGAEKLRRSRDGFVGRILKLVAAAAG 463
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
++ IF HF+ GL+ N+LA P ++ +V+P + ++LM L LD +P
Sbjct: 464 TSLIAGLASGIFAAYHFNNTAPLGLVGNVLAEPAIALLVMPFAVFGLVLMPLQLDWVPLQ 523
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
+M WG+ + HIA ++ + G +P + V + +L V T ++ + + +
Sbjct: 524 IMGWGIFAVRHIAAFVATWSPDGNPGTMPALTLVFWTIALVLAVVLSTRLKVLALPFVVL 583
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNTL-ISNYSNPPSFIFSQWKSALITPFHEA 266
+++ P+ PD+++SE LV + ++ N + P F WK+A +
Sbjct: 584 GLMVFLREPF---PDIVVSEDAKLVGVRLEDGRLAVNRNRPSQFTIDNWKTAYLVKEMIP 640
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
P K++ + F C++ C R + M ++C
Sbjct: 641 PLSVKKE-------------KLAASDGFECVE-GVCTITLRDGRTLAYTGEPAMREIACN 686
Query: 327 LSDILITTIRDINTKLCNVSLL-ITPEILQKQGSLEITIIPPSNDNDKVKF--------- 376
+ D++I + + ++ I+ L +G++EI + +++ K
Sbjct: 687 IGDVVILAVPGKDATCGRSTITSISKRDLALKGAVEIRLGQQRDESRSPKAATGKSHETA 746
Query: 377 ---------------IIKSAIENLHFPWTKHRI 394
I A++ PW HRI
Sbjct: 747 RLDEKQPRPDLRPDDRITYAVDVPSRPWHLHRI 779
Score = 77.1 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 9/138 (6%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY--SSESHNTWTW 70
+ + G ARL PSGP PG +DF+F +Y+ GI A G+F PK+ +
Sbjct: 194 IGSGLSGFARLRIPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKVAIVPPPDELTAEIS 253
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY-------GLIANILAIPILS 123
+ I+ ++ I IG + AS + I +A+IL+I L
Sbjct: 254 QWIAMLRVRVSERIEEVIGGEDGSVASALVAGTRAGISEQTNDDLRKAGLAHILSISGLH 313
Query: 124 FVVIPAGLIAILLMILSL 141
+ ++ L +L
Sbjct: 314 MALAAGVVMLTLRSAFAL 331
>gi|265995061|ref|ZP_06107618.1| DNA uptake protein [Brucella melitensis bv. 3 str. Ether]
gi|262766174|gb|EEZ11963.1| DNA uptake protein [Brucella melitensis bv. 3 str. Ether]
Length = 426
Score = 228 bits (581), Expect = 1e-57, Method: Composition-based stats.
Identities = 81/378 (21%), Positives = 146/378 (38%), Gaps = 52/378 (13%)
Query: 53 YSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA------NIGTYGSASASIFLIKHFHC 106
S P S + ++ + ++ FL + A ++ IF HF+
Sbjct: 23 SSPPMPGGSERNARKFSRAGRKAAERGFLARMVAPAVATGGTSLVAGLASGIFAAYHFNN 82
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVA 166
GL+ N+LA+P +S +V+P G+ ++LM L LD +P VM GL + HIA ++
Sbjct: 83 TAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQVMGVGLWAVRHIAAFVASW 142
Query: 167 HNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
+ G +P + V + L+ V T ++ + ++ + + P+ PD+++S
Sbjct: 143 SPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVS 199
Query: 227 EKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEI 285
E LV + ++ N P F WKSA + P QK + SS
Sbjct: 200 EDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIKQIIEP--QKGTKKNNAGSS---- 253
Query: 286 LRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL-CN 344
F+C ++ C R + + M ++C + DI I I +
Sbjct: 254 ------SGFIC-EEGVCFVTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESE 306
Query: 345 VSLLITPEILQKQGSLEITII-----PPSNDNDKVKFI---------------------- 377
+L+I+ L +G+LEI + + K +
Sbjct: 307 QTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPALVPPKPGLEAEQLPNRPAFQYYRD 366
Query: 378 -IKSAIENLHFPWTKHRI 394
+ A++ PW HR+
Sbjct: 367 QLTFAVDAPSRPWHLHRL 384
>gi|319783656|ref|YP_004143132.1| ComEC/Rec2-related protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169544|gb|ADV13082.1| ComEC/Rec2-related protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 820
Score = 225 bits (573), Expect = 9e-57, Method: Composition-based stats.
Identities = 75/363 (20%), Positives = 137/363 (37%), Gaps = 16/363 (4%)
Query: 34 LFDFNFSSYYKGISAI-GYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
F +F++ + A G+ + + + + A
Sbjct: 445 SFQMSFAATAALVGAYAGWADHRAGKARTPPPKRSLPGFLTRKFLLAAIG--LAMTSIIA 502
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
++ ++F I HF + L AN+ +PI++ VV+ + + LLM LD +M G
Sbjct: 503 GSATTLFAIWHFQRVSPLSLFANLAVMPIVT-VVMFLAVASALLMPFGLDWPALYLMGKG 561
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
L ++I I+ IS +G I + S + + + ++ T +R + L
Sbjct: 562 LTMMIAISGWISERSPVDGVGLISQQSVLLVAIALVIATMATTWLRLAALPF---ALAGL 618
Query: 213 FTFPYSFSPDLLISEKGNLVAL-VDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
T + +PD+LISE LVAL + L + P F WK AL + P V
Sbjct: 619 LTVSDTRTPDVLISEDARLVALPIGGGELAVSRQRPNEFTVDNWKRALTSETIVVPEVFD 678
Query: 272 EDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL 331
Q + + + F C CV H S I+ ++ + +C ++++
Sbjct: 679 ---NSDGQFDVADAVELPPGSPFYC-SSGVCVARHMSGAIIAYVEDRKDTWKACGFAELI 734
Query: 332 ITTIRDINTKLCNV-SLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
+ N L+IT L ++GS + + I A+++ + PW
Sbjct: 735 VVNDATAYDACHNPLVLVITKRQLARKGSAAVFF---DRQSATTPATISFAVDSPYRPWH 791
Query: 391 KHR 393
R
Sbjct: 792 TQR 794
Score = 80.6 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
A + I G A+L PP+GP P +DF+F SY+ GI G+F PK++ + + + +
Sbjct: 227 AGSLITGYAKLLPPTGPVRPDSYDFSFDSYFAGIGGSGFFLGNPKLVVTDDGDMPLSARI 286
Query: 73 ISSI---KQSFLNEIRANIGTYGSASASIFLIK-------HFHCIPVYGLIANILAIPIL 122
SS+ ++ + IRA++G A+ ++ + I +I++I L
Sbjct: 287 SSSVENAREGIADHIRASVGGAEGEIAAALIVGVRAGIPDDINEAMRRTGIYHIISISGL 346
Query: 123 SFVVIPAGLIAILLMILSL 141
++ ++ +L +L
Sbjct: 347 HMALVAGTIMGLLRGAFAL 365
>gi|17987122|ref|NP_539756.1| COME operon protein 3 [Brucella melitensis bv. 1 str. 16M]
gi|256044801|ref|ZP_05447705.1| COME operon protein 3 [Brucella melitensis bv. 1 str. Rev.1]
gi|17982785|gb|AAL52020.1| come operon protein 3 [Brucella melitensis bv. 1 str. 16M]
gi|326409163|gb|ADZ66228.1| ComEC/Rec2-related protein [Brucella melitensis M28]
gi|326538873|gb|ADZ87088.1| come operon protein 3 [Brucella melitensis M5-90]
Length = 565
Score = 225 bits (573), Expect = 9e-57, Method: Composition-based stats.
Identities = 84/397 (21%), Positives = 154/397 (38%), Gaps = 60/397 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA------N 87
F +FS+ I+A + +S + ++ + ++ FL + A
Sbjct: 151 SFQMSFSATAALIAAYAW--------WSERNARKFSRAGRKAAERGFLARMVAPAVATGG 202
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P
Sbjct: 203 TSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQ 262
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
VM GL + HIA ++ + G +P + V + L+ V T ++ + ++
Sbjct: 263 VMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALPLLAA 322
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEA 266
+ + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 323 GLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIKQIIE 379
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
P QK + SS F+C ++ C R + + M ++C
Sbjct: 380 P--QKGTKKNNAGSS----------SGFIC-EEGVCFVTLRDGRTLSYTADETMRDVACN 426
Query: 327 LSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITII-----PPSNDNDKVKFI--- 377
+ DI I I + +L+I+ L +G+LEI + + K +
Sbjct: 427 IGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPALVPPK 486
Query: 378 --------------------IKSAIENLHFPWTKHRI 394
+ A++ PW HR+
Sbjct: 487 PGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 523
>gi|260565598|ref|ZP_05836082.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
melitensis bv. 1 str. 16M]
gi|265991225|ref|ZP_06103782.1| LOW QUALITY PROTEIN: DNA uptake protein [Brucella melitensis bv. 1
str. Rev.1]
gi|260151666|gb|EEW86760.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella
melitensis bv. 1 str. 16M]
gi|263002009|gb|EEZ14584.1| LOW QUALITY PROTEIN: DNA uptake protein [Brucella melitensis bv. 1
str. Rev.1]
Length = 679
Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats.
Identities = 84/397 (21%), Positives = 154/397 (38%), Gaps = 60/397 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA------N 87
F +FS+ I+A + +S + ++ + ++ FL + A
Sbjct: 265 SFQMSFSATAALIAAYAW--------WSERNARKFSRAGRKAAERGFLARMVAPAVATGG 316
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P
Sbjct: 317 TSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQ 376
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
VM GL + HIA ++ + G +P + V + L+ V T ++ + ++
Sbjct: 377 VMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALPLLAA 436
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEA 266
+ + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 437 GLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIKQIIE 493
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
P QK + SS F+C ++ C R + + M ++C
Sbjct: 494 P--QKGTKKNNAGSS----------SGFIC-EEGVCFVTLRDGRTLSYTADETMRDVACN 540
Query: 327 LSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITII-----PPSNDNDKVKFI--- 377
+ DI I I + +L+I+ L +G+LEI + + K +
Sbjct: 541 IGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPALVPPK 600
Query: 378 --------------------IKSAIENLHFPWTKHRI 394
+ A++ PW HR+
Sbjct: 601 PGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 637
Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 9/122 (7%)
Query: 29 PAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK--ISSIKQSFLNEIRA 86
P PG +DF+F +Y+ GI A G+F PK I I++++ I+
Sbjct: 64 PVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRVPPLQTLSAEFSEWIATLRVRVSERIQE 123
Query: 87 NIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPILSFVVIPAGLIAILLMIL 139
I A+ + I +A+IL+I L + ++ L +
Sbjct: 124 VIAGEDGNVAAALIAGARGGISEETNKDLRKAGLAHILSISGLHMALAAGVVMLALRSLF 183
Query: 140 SL 141
+L
Sbjct: 184 AL 185
>gi|261758335|ref|ZP_06002044.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp.
F5/99]
gi|261738319|gb|EEY26315.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp.
F5/99]
Length = 679
Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats.
Identities = 84/397 (21%), Positives = 154/397 (38%), Gaps = 60/397 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA------N 87
F +FS+ I+A + +S + ++ + ++ FL + A
Sbjct: 265 SFQMSFSATAALIAAYAW--------WSERNARKFSRAGRKAAERGFLARMVAPAVATGG 316
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P
Sbjct: 317 TSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQ 376
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
VM GL + HIA ++ + G +P + V + L+ V T ++ + ++
Sbjct: 377 VMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALPLLAA 436
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEA 266
+ + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 437 GLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIKQIIE 493
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
P QK + SS F+C ++ C R + + M ++C
Sbjct: 494 P--QKGTKKNNAGSS----------SGFIC-EEGVCFVTLRDGRTLSYTADETMRDVACN 540
Query: 327 LSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITII-----PPSNDNDKVKFI--- 377
+ DI I I + +L+I+ L +G+LEI + + K +
Sbjct: 541 IGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPALVPPK 600
Query: 378 --------------------IKSAIENLHFPWTKHRI 394
+ A++ PW HR+
Sbjct: 601 PGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 637
Score = 71.0 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 52/132 (39%), Gaps = 9/132 (6%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK--ISSI 76
G L PSGP PG +DF+F +Y+ GI A G+F PK I I+++
Sbjct: 54 GFCTLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRVPPPQTLSAEFSEWIATL 113
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPILSFVVIPA 129
+ I+ I A+ + I +A+IL+I L +
Sbjct: 114 RVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAGLAHILSISGLHMALAAG 173
Query: 130 GLIAILLMILSL 141
++ L + +L
Sbjct: 174 VVMLALRSLFAL 185
>gi|265999445|ref|ZP_06111693.1| ComEC/Rec2 family protein [Brucella melitensis bv. 2 str. 63/9]
gi|263093994|gb|EEZ17928.1| ComEC/Rec2 family protein [Brucella melitensis bv. 2 str. 63/9]
Length = 584
Score = 225 bits (572), Expect = 1e-56, Method: Composition-based stats.
Identities = 84/397 (21%), Positives = 154/397 (38%), Gaps = 60/397 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA------N 87
F +FS+ I+A + +S + ++ + ++ FL + A
Sbjct: 170 SFQMSFSATAALIAAYAW--------WSERNARKFSRAGRKAAERGFLARMVAPAVATGG 221
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P
Sbjct: 222 TSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQ 281
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
VM GL + HIA ++ + G +P + V + L+ V T ++ + ++
Sbjct: 282 VMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALPLLAA 341
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEA 266
+ + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 342 GLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIKQIIE 398
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
P QK + SS F+C ++ C R + + M ++C
Sbjct: 399 P--QKGTKKNNAGSS----------SGFIC-EEGVCFVTLRDGRTLSYTADETMRDVACN 445
Query: 327 LSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITII-----PPSNDNDKVKFI--- 377
+ DI I I + +L+I+ L +G+LEI + + K +
Sbjct: 446 IGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPALVPPK 505
Query: 378 --------------------IKSAIENLHFPWTKHRI 394
+ A++ PW HR+
Sbjct: 506 PGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 542
>gi|13470827|ref|NP_102396.1| DNA uptake protein [Mesorhizobium loti MAFF303099]
gi|14021570|dbj|BAB48182.1| DNA uptake protein [Mesorhizobium loti MAFF303099]
Length = 753
Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats.
Identities = 73/363 (20%), Positives = 135/363 (37%), Gaps = 16/363 (4%)
Query: 34 LFDFNFSSYYKGISAI-GYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
F +F++ + A G+ + + A
Sbjct: 381 SFQMSFAATAALVGAYAGWADHHAGKARPPPPKRSLPGFLTRKFLLATGG--LAMTSIIA 438
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ ++F I HF + L AN+ +PI+S VV+ + + LLM LD +M G
Sbjct: 439 GCATALFAIWHFQRVSPLSLFANLAVMPIVS-VVMFLAVASALLMPFGLDAPTLYLMGKG 497
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
L +I I+ IS +G I S + + + ++ T +R + L
Sbjct: 498 LTAMIAISAWISERSPVDAVGLISLQSVLLVTIALVIATMATTWLRLAAVPF---ALAGL 554
Query: 213 FTFPYSFSPDLLISEKGNLVAL-VDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
T + +PD+LISE LVAL + L + + P F WK AL++ P +
Sbjct: 555 LTVSDTRTPDVLISEDARLVALPIGGGELAVSRARPNEFTVDNWKRALVSETIVVPEMFD 614
Query: 272 EDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL 331
+ Q + + + F C C+ H S I+ ++ + +C +D++
Sbjct: 615 ---KADGQFDIADAVNLPPGAPFYC-TDGVCLARHPSGAIIAHVEDRKDTWKACGFADLI 670
Query: 332 ITTIRDINTKLCNV-SLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
+ N L++T L ++GS + + + A++ + PW
Sbjct: 671 VVNDATGYDACHNPLVLVVTKRQLARKGSAAVFF---DRQSATGPLTVSFAVDGPYRPWH 727
Query: 391 KHR 393
+ R
Sbjct: 728 EQR 730
Score = 79.8 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
A + + G A+L PP+GP P +DF+F SY+ GI G+F PK++ +++ T
Sbjct: 161 MTAGSLVTGYAKLLPPTGPVRPDSYDFSFDSYFAGIGGSGFFLGNPKLVSATDDEVPLTA 220
Query: 71 KKISSI---KQSFLNEIRANIGTYGSASASIFLIK-------HFHCIPVYGLIANILAIP 120
+ S I +++ + IRA +G A+ ++ + I +I++I
Sbjct: 221 RLFSGIENAREAIADHIRATVGGAEGEIAAALIVGVRAGIPDEINEAMRRTGIYHIISIS 280
Query: 121 ILSFVVIPAGLIAILLMILSL 141
L ++ ++ +L +L
Sbjct: 281 GLHMALVAGTIMGLLRGAFAL 301
>gi|260168847|ref|ZP_05755658.1| ComEC/Rec2 family protein, putative [Brucella sp. F5/99]
Length = 584
Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats.
Identities = 84/397 (21%), Positives = 154/397 (38%), Gaps = 60/397 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA------N 87
F +FS+ I+A + +S + ++ + ++ FL + A
Sbjct: 170 SFQMSFSATAALIAAYAW--------WSERNARKFSRAGRKAAERGFLARMVAPAVATGG 221
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P
Sbjct: 222 TSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQ 281
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
VM GL + HIA ++ + G +P + V + L+ V T ++ + ++
Sbjct: 282 VMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALPLLAA 341
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEA 266
+ + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 342 GLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIKQIIE 398
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
P QK + SS F+C ++ C R + + M ++C
Sbjct: 399 P--QKGTKKNNAGSS----------SGFIC-EEGVCFVTLRDGRTLSYTADETMRDVACN 445
Query: 327 LSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITII-----PPSNDNDKVKFI--- 377
+ DI I I + +L+I+ L +G+LEI + + K +
Sbjct: 446 IGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPALVPPK 505
Query: 378 --------------------IKSAIENLHFPWTKHRI 394
+ A++ PW HR+
Sbjct: 506 PGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 542
>gi|260459229|ref|ZP_05807484.1| ComEC/Rec2-related protein [Mesorhizobium opportunistum WSM2075]
gi|259034783|gb|EEW36039.1| ComEC/Rec2-related protein [Mesorhizobium opportunistum WSM2075]
Length = 817
Score = 223 bits (568), Expect = 4e-56, Method: Composition-based stats.
Identities = 74/362 (20%), Positives = 138/362 (38%), Gaps = 14/362 (3%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ + A ++ + + + + K A
Sbjct: 444 SFQMSFAATAALVGAY-AGWADHRAGKTRPPPPKRSLPGFLTRKFLLATGGLAMTSIIAG 502
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
++ ++F I HF + L AN+ +PI+S VV+ + + LLM LD +M GL
Sbjct: 503 SATALFAIWHFQRVSPLSLFANLAVMPIVS-VVMFLAVASALLMPFGLDAPSLYLMGKGL 561
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
+I I+ IS +G I + S + + + ++ T +R + L
Sbjct: 562 TAMIAISAWISERSPVDAVGLISQQSVLLVTIALVIATMATTWLRLAALPF---ALAGLL 618
Query: 214 TFPYSFSPDLLISEKGNLVAL-VDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ +PD+L+SE LVAL + L + + P F WK AL + P +
Sbjct: 619 AVSDTRTPDVLVSEDARLVALPIGGGELAVSRARPNEFTVDNWKRALTSETIIPPEMFD- 677
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
+ Q + + + F C C+ H S I+ ++ + +C +D++I
Sbjct: 678 --KADGQFDIADAVNLPPGAPFYC-TDGVCLARHPSGAIIAHVEDRKDTWKACGFADLII 734
Query: 333 TTIRDINTKLCNV-SLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
N L++T L ++GS I + I A+++ + PW
Sbjct: 735 VNDATAYDACHNPLVLVVTKRQLARKGSAAIFF---DRQSATGPPTISFAVDSPYRPWHA 791
Query: 392 HR 393
R
Sbjct: 792 QR 793
Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
A + I G A+L PP+GP P +DF+F SY+ GI G+F PK++ + + +
Sbjct: 224 MTAGSLITGYAKLLPPTGPVRPESYDFSFDSYFAGIGGSGFFLGNPKVVAADDGGMPLSA 283
Query: 71 KKISSI---KQSFLNEIRANIGTYGSASASIFLIK-------HFHCIPVYGLIANILAIP 120
+ S I +++ + IR ++G A+ ++ + I +I++I
Sbjct: 284 RLSSGIENAREAIADHIRGSVGGAEGEIAAALIVGVRAGIPDEINEAMRRTGIYHIISIS 343
Query: 121 ILSFVVIPAGLIAILLMILSL 141
L ++ ++ +L +L
Sbjct: 344 GLHMALVAGTIMGLLRGAFAL 364
>gi|161619097|ref|YP_001592984.1| ComEC/Rec2-related protein [Brucella canis ATCC 23365]
gi|260566320|ref|ZP_05836790.1| DNA uptake protein [Brucella suis bv. 4 str. 40]
gi|161335908|gb|ABX62213.1| ComEC/Rec2-related protein [Brucella canis ATCC 23365]
gi|260155838|gb|EEW90918.1| DNA uptake protein [Brucella suis bv. 4 str. 40]
Length = 843
Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats.
Identities = 85/397 (21%), Positives = 155/397 (39%), Gaps = 60/397 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +FS+ I+A + +S + ++ + ++ FL + A+ G
Sbjct: 429 SFQMSFSATAALIAAYAW--------WSERNARKFSRAGRKAAERGFLARMVASAVATGG 480
Query: 94 A------SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P
Sbjct: 481 TSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQ 540
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
VM GL + HIA ++ + G +P + V + L+ V T ++ + ++
Sbjct: 541 VMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALPLLAA 600
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEA 266
+ + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 601 GLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIKQIIE 657
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
P QK + SS F+C ++ C R + + M ++C
Sbjct: 658 P--QKGTKKNNAGSS----------SGFIC-EEGVCFVTLRDGRTLSYTADETMRDVACN 704
Query: 327 LSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITII-------------------- 365
+ DI I I + +L+I+ L +G+LEI +
Sbjct: 705 IGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPALVPPK 764
Query: 366 --------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 765 PGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 801
Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 55/139 (39%), Gaps = 9/139 (6%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
+ + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 211 AIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRVPPPQTLSAEF 270
Query: 72 K--ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPIL 122
I++++ I+ I A+ + I + +IL+I L
Sbjct: 271 SEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAGLTHILSISGL 330
Query: 123 SFVVIPAGLIAILLMILSL 141
+ ++ L + +L
Sbjct: 331 HMALAAGVVMLALRSLFAL 349
>gi|121601648|ref|YP_988909.1| competence protein [Bartonella bacilliformis KC583]
gi|120613825|gb|ABM44426.1| competence protein [Bartonella bacilliformis KC583]
Length = 757
Score = 222 bits (565), Expect = 8e-56, Method: Composition-based stats.
Identities = 86/385 (22%), Positives = 160/385 (41%), Gaps = 48/385 (12%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
I G+A + F +FS+ I+A + +S + + KI
Sbjct: 408 AIAGLAIVVVVPHEILGPSFQMSFSATIALIAAFEW-WSKRHSSDRRKITPSHVGGKIVR 466
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ ++ G ++ I+ HF + + +I+N LA+PI+S +V+P GLIA
Sbjct: 467 FAFLSFSSTCSSSLIAG-LASGIYAAYHFTNVAPFSIISNALALPIVSILVMPFGLIAAF 525
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
M+L + +P +M +G+ ++ IA+ I+ G IP ++ + + + + + F KT
Sbjct: 526 AMLLEFEWLPLQIMGFGISLVTKIAYSITAISPVINPGFIPLSTLILLSLGLVGLTFFKT 585
Query: 196 NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
++R I I ++ + L+I++ NLV ++++ L ++ S F S W
Sbjct: 586 SLR---FFFIIFIFIGIWVYVMRSPVQLIIADNMNLVGIINEKILYADRSRVSKFTKSVW 642
Query: 256 KSAL-----ITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDV 310
+ + I P P + + F+C + C + +
Sbjct: 643 EKSFYINETIKPTKIGPALNGQ---------------------FVC-DDNICTALLENGL 680
Query: 311 IVGVLKRKDMIRLSCQLSDILITTIRDINTKLCN--VSLLITPEILQKQGSLEITIIPPS 368
V VL ++ C SD++I T ++ K CN ++ TP+ L +GS+ +
Sbjct: 681 KVVVLYKET---DQCIKSDVIIQT-SIMHDKTCNDVAGIVFTPQQLLSRGSVMM------ 730
Query: 369 NDNDKVKFIIKSAIENLHFPWTKHR 393
K K II H PW HR
Sbjct: 731 ---MKNKDIIWY-YTAFHRPWNVHR 751
Score = 73.3 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 46/237 (19%), Positives = 88/237 (37%), Gaps = 14/237 (5%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
D + G RL SGP PG +DF+F +Y+ I A G ++ P I S+
Sbjct: 205 DGSVPGDGLYGKVRLRALSGPVRPGSYDFSFHNYFNRIGAQGTYFGKPIKISVSQPDTIL 264
Query: 69 TWK--KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAI 119
KI +++ IR I + A+ + I +A+IL+I
Sbjct: 265 GMASQKIENLRMKMTQRIRTKISGEEGSVAAALITGQRGAISSDTNEALRMSGLAHILSI 324
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
L ++ +I ++ +L + + +I +A I+ + +
Sbjct: 325 SGLHMALLSGMVIIVIRSFFALFPVFSSYYSTKKFSVI-VALIITAFYLILSGAAVAAQR 383
Query: 180 FVTIVVEFLLMVFCKTN---IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVA 233
+V L+ V C + +R+ + I ++++ S + S L+A
Sbjct: 384 SFVMVAVMLIAVLCNRSGVTMRNFAIAGLAI-VVVVPHEILGPSFQMSFSATIALIA 439
>gi|254704433|ref|ZP_05166261.1| ComEC/Rec2-related protein [Brucella suis bv. 3 str. 686]
gi|261755110|ref|ZP_05998819.1| DNA uptake protein [Brucella suis bv. 3 str. 686]
gi|261744863|gb|EEY32789.1| DNA uptake protein [Brucella suis bv. 3 str. 686]
Length = 843
Score = 222 bits (565), Expect = 9e-56, Method: Composition-based stats.
Identities = 84/397 (21%), Positives = 153/397 (38%), Gaps = 60/397 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA------N 87
F +FS+ I+A + +S + ++ + ++ FL + A
Sbjct: 429 SFQMSFSATAALIAAYAW--------WSERNARKFSRAGRKAAERGFLARMVAPAVATGG 480
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P
Sbjct: 481 TSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQ 540
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
VM GL + HIA ++ + G +P + V + L+ V T ++ + ++
Sbjct: 541 VMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALPLLAA 600
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEA 266
+ + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 601 GLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIKQIIE 657
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
P QK + SS F+C ++ C R + + M ++C
Sbjct: 658 P--QKGTKKNNAGSS----------SGFIC-EEGVCFVTLRDGRTLSYTADETMRDVACN 704
Query: 327 LSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITII-------------------- 365
+ DI I I + +L+I+ L +G+LEI +
Sbjct: 705 IGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPALVPPK 764
Query: 366 --------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 765 PGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 801
Score = 76.8 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 55/139 (39%), Gaps = 9/139 (6%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
+ + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 211 AIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRVPPPQTLSAEF 270
Query: 72 K--ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPIL 122
I++++ I+ I A+ + I + +IL+I L
Sbjct: 271 SEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAGLTHILSISGL 330
Query: 123 SFVVIPAGLIAILLMILSL 141
+ ++ L + +L
Sbjct: 331 HMALAAGVVMLALRSLFAL 349
>gi|254689370|ref|ZP_05152624.1| ComEC/Rec2-related protein [Brucella abortus bv. 6 str. 870]
Length = 849
Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats.
Identities = 84/397 (21%), Positives = 153/397 (38%), Gaps = 60/397 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA------N 87
F +FS+ I+A + +S + ++ + ++ FL + A
Sbjct: 435 SFQMSFSATAALIAAYAW--------WSERNARKFSRAGRKAAERGFLARMVAPAVATGG 486
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P
Sbjct: 487 TSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQ 546
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
VM GL + HIA ++ + G +P + V + L+ V T ++ + ++
Sbjct: 547 VMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALPLLAA 606
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEA 266
+ + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 607 GLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIKQIIE 663
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
P QK + SS F+C ++ C R + + M ++C
Sbjct: 664 P--QKGTKKNNAGSS----------SGFIC-EEGVCFVTLRDGRTLSYTADETMRDVACN 710
Query: 327 LSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITII-------------------- 365
+ DI I I + +L+I+ L +G+LEI +
Sbjct: 711 IGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPALVPPK 770
Query: 366 --------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 771 PGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 807
Score = 78.7 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 9/139 (6%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
+ + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 217 AIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRVPPPQTLSAEF 276
Query: 72 K--ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPIL 122
I++++ I+ I A+ + I +A+IL+I L
Sbjct: 277 SEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAGLAHILSISGL 336
Query: 123 SFVVIPAGLIAILLMILSL 141
+ ++ L + +L
Sbjct: 337 HMALAAGVVMLALRSLFAL 355
>gi|23502023|ref|NP_698150.1| ComEC/Rec2 family protein [Brucella suis 1330]
gi|23347976|gb|AAN30065.1| ComEC/Rec2 family protein, putative [Brucella suis 1330]
Length = 843
Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats.
Identities = 84/397 (21%), Positives = 153/397 (38%), Gaps = 60/397 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA------N 87
F +FS+ I+A + +S + ++ + ++ FL + A
Sbjct: 429 SFQMSFSATAALIAAYAW--------WSERNARKFSGAGRKAAERGFLARMVAPAVATGG 480
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P
Sbjct: 481 TSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQ 540
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
VM GL + HIA ++ + G +P + V + L+ V T ++ + ++
Sbjct: 541 VMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALPLLAA 600
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEA 266
+ + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 601 GLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIKQIIE 657
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
P QK + SS F+C ++ C R + + M ++C
Sbjct: 658 P--QKGTKKNNAGSS----------SGFIC-EEGVCFVTLRDGRTLSYTADETMRDVACN 704
Query: 327 LSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITII-------------------- 365
+ DI I I + +L+I+ L +G+LEI +
Sbjct: 705 IGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPALVPPK 764
Query: 366 --------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 765 PGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 801
Score = 78.7 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 9/139 (6%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
+ + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 211 AIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRVPPPQTLSAEF 270
Query: 72 K--ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPIL 122
I++++ I+ I A+ + I +A+IL+I L
Sbjct: 271 SEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAGLAHILSISGL 330
Query: 123 SFVVIPAGLIAILLMILSL 141
+ ++ L + +L
Sbjct: 331 HMALAAGVVMLALRSLFAL 349
>gi|256061228|ref|ZP_05451379.1| ComEC/Rec2-related protein [Brucella neotomae 5K33]
gi|261325235|ref|ZP_05964432.1| DNA uptake protein [Brucella neotomae 5K33]
gi|261301215|gb|EEY04712.1| DNA uptake protein [Brucella neotomae 5K33]
Length = 843
Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats.
Identities = 84/397 (21%), Positives = 153/397 (38%), Gaps = 60/397 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA------N 87
F +FS+ I+A + +S + ++ + ++ FL + A
Sbjct: 429 SFQMSFSATAALIAAYAW--------WSERNARKFSRAGRKAAERGFLARMVAPAVATGG 480
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P
Sbjct: 481 TSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQ 540
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
VM GL + HIA ++ + G +P + V + L+ V T ++ + ++
Sbjct: 541 VMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALPLLAA 600
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEA 266
+ + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 601 GLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIKQIIE 657
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
P QK + SS F+C ++ C R + + M ++C
Sbjct: 658 P--QKGTKKNNAGSS----------SGFIC-EEGVCFVTLRDGRTLSYTADETMRDVACN 704
Query: 327 LSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITII-------------------- 365
+ DI I I + +L+I+ L +G+LEI +
Sbjct: 705 IGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPALVPPK 764
Query: 366 --------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 765 PGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 801
Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 9/139 (6%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
+ + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 211 AIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRVPPPQTLSAEF 270
Query: 72 K--ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPIL 122
I++++ I+ I A+ + I +A+IL+I L
Sbjct: 271 SEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAGLAHILSISGL 330
Query: 123 SFVVIPAGLIAILLMILSL 141
+ ++ L + +L
Sbjct: 331 HMALAAGVVMLALRSLFAL 349
>gi|254706671|ref|ZP_05168499.1| ComEC/Rec2-related protein [Brucella pinnipedialis M163/99/10]
gi|254710221|ref|ZP_05172032.1| ComEC/Rec2-related protein [Brucella pinnipedialis B2/94]
gi|256031715|ref|ZP_05445329.1| ComEC/Rec2-related protein [Brucella pinnipedialis M292/94/1]
gi|256369571|ref|YP_003107081.1| ComEC/Rec2 family protein, putative [Brucella microti CCM 4915]
gi|261314132|ref|ZP_05953329.1| DNA uptake protein [Brucella pinnipedialis M163/99/10]
gi|261317779|ref|ZP_05956976.1| DNA uptake protein [Brucella pinnipedialis B2/94]
gi|265988810|ref|ZP_06101367.1| DNA uptake protein [Brucella pinnipedialis M292/94/1]
gi|255999733|gb|ACU48132.1| ComEC/Rec2 family protein, putative [Brucella microti CCM 4915]
gi|261297002|gb|EEY00499.1| DNA uptake protein [Brucella pinnipedialis B2/94]
gi|261303158|gb|EEY06655.1| DNA uptake protein [Brucella pinnipedialis M163/99/10]
gi|264661007|gb|EEZ31268.1| DNA uptake protein [Brucella pinnipedialis M292/94/1]
Length = 843
Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats.
Identities = 84/397 (21%), Positives = 153/397 (38%), Gaps = 60/397 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA------N 87
F +FS+ I+A + +S + ++ + ++ FL + A
Sbjct: 429 SFQMSFSATAALIAAYAW--------WSERNARKFSRAGRKAAERGFLARMVAPAVATGG 480
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P
Sbjct: 481 TSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQ 540
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
VM GL + HIA ++ + G +P + V + L+ V T ++ + ++
Sbjct: 541 VMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALPLLAA 600
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEA 266
+ + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 601 GLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIKQIIE 657
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
P QK + SS F+C ++ C R + + M ++C
Sbjct: 658 P--QKGTKKNNAGSS----------SGFIC-EEGVCFVTLRDGRTLSYTADETMRDVACN 704
Query: 327 LSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITII-------------------- 365
+ DI I I + +L+I+ L +G+LEI +
Sbjct: 705 IGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPALVPPK 764
Query: 366 --------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 765 PGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 801
Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 9/139 (6%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
+ + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 211 AIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRVPPPQTLSAEF 270
Query: 72 K--ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPIL 122
I++++ I+ I A+ + I +A+IL+I L
Sbjct: 271 SEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAGLAHILSISGL 330
Query: 123 SFVVIPAGLIAILLMILSL 141
+ ++ L + +L
Sbjct: 331 HMALAAGVVMLALRSLFAL 349
>gi|306841870|ref|ZP_07474550.1| ComEC/Rec2-related protein [Brucella sp. BO2]
gi|306288000|gb|EFM59402.1| ComEC/Rec2-related protein [Brucella sp. BO2]
Length = 825
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 81/397 (20%), Positives = 153/397 (38%), Gaps = 60/397 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA------N 87
F +FS+ I+A + +S + ++ + ++ FL + A
Sbjct: 411 SFQMSFSATAALIAAYAW--------WSERNARKFSRASRKAGERGFLARMVAPAVATGG 462
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P
Sbjct: 463 TSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQ 522
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
VM GL + HIA ++ + G +P + V + L+ V T ++ + ++
Sbjct: 523 VMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALPLLAA 582
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEA 266
+ + P+ PD+++SE LV + ++ +N P F WKSA +
Sbjct: 583 GLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAANRDRPSKFTIDNWKSAYLIKKIIE 639
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
P + + F+C ++ C R + + M ++C
Sbjct: 640 PQ------------KGTKKNNAGNNGGFIC-EEGVCFVTLRDGRTLSYTADETMRDVACN 686
Query: 327 LSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITII-----PPSNDNDKVKFI--- 377
+ DI+I I + +L+I+ L +G+LEI + N K +
Sbjct: 687 IGDIVILAIPGKGAECESEQTLVISKRDLALKGTLEIRLGGQLSIASDEANSKPALVPPK 746
Query: 378 --------------------IKSAIENLHFPWTKHRI 394
+ A++ PW HR+
Sbjct: 747 SGLEAEQLPNRSAFQYYRDQLTFAVDAPSRPWHLHRL 783
Score = 78.7 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 9/139 (6%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
+ + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 193 AIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRVPPPQTLSAEF 252
Query: 72 K--ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPIL 122
I++++ I+ I A+ + I +A+IL+I L
Sbjct: 253 SEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAGLAHILSISGL 312
Query: 123 SFVVIPAGLIAILLMILSL 141
+ ++ L + +L
Sbjct: 313 HMALAAGVVMLALRSLFAL 331
>gi|256257616|ref|ZP_05463152.1| ComEC/Rec2-related protein [Brucella abortus bv. 9 str. C68]
gi|260754887|ref|ZP_05867235.1| DNA uptake protein [Brucella abortus bv. 6 str. 870]
gi|260883899|ref|ZP_05895513.1| DNA uptake protein [Brucella abortus bv. 9 str. C68]
gi|297248458|ref|ZP_06932176.1| competence protein ComEC [Brucella abortus bv. 5 str. B3196]
gi|260674995|gb|EEX61816.1| DNA uptake protein [Brucella abortus bv. 6 str. 870]
gi|260873427|gb|EEX80496.1| DNA uptake protein [Brucella abortus bv. 9 str. C68]
gi|297175627|gb|EFH34974.1| competence protein ComEC [Brucella abortus bv. 5 str. B3196]
Length = 843
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 84/397 (21%), Positives = 153/397 (38%), Gaps = 60/397 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA------N 87
F +FS+ I+A + +S + ++ + ++ FL + A
Sbjct: 429 SFQMSFSATAALIAAYAW--------WSERNARKFSRAGRKAAERGFLARMVAPAVATGG 480
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P
Sbjct: 481 TSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQ 540
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
VM GL + HIA ++ + G +P + V + L+ V T ++ + ++
Sbjct: 541 VMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALPLLAA 600
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEA 266
+ + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 601 GLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIKQIIE 657
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
P QK + SS F+C ++ C R + + M ++C
Sbjct: 658 P--QKGTKKNNAGSS----------SGFIC-EEGVCFVTLRDGRTLSYTADETMRDVACN 704
Query: 327 LSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITII-------------------- 365
+ DI I I + +L+I+ L +G+LEI +
Sbjct: 705 IGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPALVPPK 764
Query: 366 --------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 765 PGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 801
Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 9/139 (6%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
+ + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 211 AIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRVPPPQTLSAEF 270
Query: 72 K--ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPIL 122
I++++ I+ I A+ + I +A+IL+I L
Sbjct: 271 SEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAGLAHILSISGL 330
Query: 123 SFVVIPAGLIAILLMILSL 141
+ ++ L + +L
Sbjct: 331 HMALAAGVVMLALRSLFAL 349
>gi|294852485|ref|ZP_06793158.1| competence protein ComEC [Brucella sp. NVSL 07-0026]
gi|294821074|gb|EFG38073.1| competence protein ComEC [Brucella sp. NVSL 07-0026]
Length = 843
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 84/397 (21%), Positives = 153/397 (38%), Gaps = 60/397 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA------N 87
F +FS+ I+A + +S + ++ + ++ FL + A
Sbjct: 429 SFQMSFSATAALIAAYAW--------WSERNARKFSRAGRKAAERGFLARMVAPAVAIGG 480
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P
Sbjct: 481 TSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQ 540
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
VM GL + HIA ++ + G +P + V + L+ V T ++ + ++
Sbjct: 541 VMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALPLLAA 600
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEA 266
+ + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 601 GLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIKQIIE 657
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
P QK + SS F+C ++ C R + + M ++C
Sbjct: 658 P--QKGTKKNNAGSS----------SGFIC-EEGVCFVTLRDGRTLSYTADETMRDVACN 704
Query: 327 LSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITII-------------------- 365
+ DI I I + +L+I+ L +G+LEI +
Sbjct: 705 IGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPALVPPK 764
Query: 366 --------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 765 PGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 801
Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 9/139 (6%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
+ + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 211 AIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRVPPPQTLSAEF 270
Query: 72 K--ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPIL 122
I++++ I+ I A+ + I +A+IL+I L
Sbjct: 271 SEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAGLAHILSISGL 330
Query: 123 SFVVIPAGLIAILLMILSL 141
+ ++ L + +L
Sbjct: 331 HMALAAGVVMLALRSLFAL 349
>gi|254693854|ref|ZP_05155682.1| ComEC/Rec2-related protein [Brucella abortus bv. 3 str. Tulya]
gi|261214139|ref|ZP_05928420.1| DNA uptake protein [Brucella abortus bv. 3 str. Tulya]
gi|260915746|gb|EEX82607.1| DNA uptake protein [Brucella abortus bv. 3 str. Tulya]
Length = 840
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 84/397 (21%), Positives = 153/397 (38%), Gaps = 60/397 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA------N 87
F +FS+ I+A + +S + ++ + ++ FL + A
Sbjct: 426 SFQMSFSATAALIAAYAW--------WSERNARKFSRAGRKAAERGFLARMVAPAVATGG 477
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P
Sbjct: 478 TSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQ 537
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
VM GL + HIA ++ + G +P + V + L+ V T ++ + ++
Sbjct: 538 VMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALPLLAA 597
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEA 266
+ + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 598 GLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIKQIIE 654
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
P QK + SS F+C ++ C R + + M ++C
Sbjct: 655 P--QKGTKKNNAGSS----------SGFIC-EEGVCFVTLRDGRTLSYTADETMRDVACN 701
Query: 327 LSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITII-------------------- 365
+ DI I I + +L+I+ L +G+LEI +
Sbjct: 702 IGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPALVPPK 761
Query: 366 --------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 762 PGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 798
Score = 78.3 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 9/139 (6%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
+ + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 211 AIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRVPPPQTLSAEF 270
Query: 72 K--ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPIL 122
I++++ I+ I A+ + I +A+IL+I L
Sbjct: 271 SEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAGLAHILSISGL 330
Query: 123 SFVVIPAGLIAILLMILSL 141
+ ++ L + +L
Sbjct: 331 HMALAAGVVMLALRSLFAL 349
>gi|254719208|ref|ZP_05181019.1| ComEC/Rec2-related protein [Brucella sp. 83/13]
gi|265984204|ref|ZP_06096939.1| DNA uptake protein [Brucella sp. 83/13]
gi|306837956|ref|ZP_07470814.1| ComEC/Rec2-related protein [Brucella sp. NF 2653]
gi|264662796|gb|EEZ33057.1| DNA uptake protein [Brucella sp. 83/13]
gi|306406880|gb|EFM63101.1| ComEC/Rec2-related protein [Brucella sp. NF 2653]
Length = 843
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 82/397 (20%), Positives = 152/397 (38%), Gaps = 60/397 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA------N 87
F +FS+ I+A + +S + ++ + ++ FL + A
Sbjct: 429 SFQMSFSATAALIAAYAW--------WSERNARKFSRAGRKAGERGFLARMVAPAVATGG 480
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P
Sbjct: 481 TSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQ 540
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
VM GL + HIA ++ + G IP + V + L+ V T ++ + ++
Sbjct: 541 VMGVGLWAVRHIAAFVASWSPDGNPGAIPGPALVLWTMALLVAVAFTTRLKLLALPLLAA 600
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEA 266
+ + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 601 GLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIKKIIE 657
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
P + + F+C ++ C R + + M ++C
Sbjct: 658 PQ------------KGTKKNTAGSNGGFIC-EEGVCFVTLRDGRTLSYTADETMGDVACN 704
Query: 327 LSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITI-----IPPSNDNDKVKFI--- 377
+ DI I I + +L+I+ L +G+LEI + I + K +
Sbjct: 705 IGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLEGQLSIASDEADSKPALVPPK 764
Query: 378 --------------------IKSAIENLHFPWTKHRI 394
+ A++ PW HR+
Sbjct: 765 LGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 801
Score = 79.1 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 9/139 (6%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
+ + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 211 AIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRVPPPQTLSAEF 270
Query: 72 K--ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPIL 122
I++++ I+ I A+ + I +A+IL+I L
Sbjct: 271 SEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAELAHILSISGL 330
Query: 123 SFVVIPAGLIAILLMILSL 141
+ ++ L + +L
Sbjct: 331 HMALAAGVVMLALRSLFAL 349
>gi|254701887|ref|ZP_05163715.1| ComEC/Rec2-related protein [Brucella suis bv. 5 str. 513]
gi|261752450|ref|ZP_05996159.1| DNA uptake protein [Brucella suis bv. 5 str. 513]
gi|261742203|gb|EEY30129.1| DNA uptake protein [Brucella suis bv. 5 str. 513]
Length = 843
Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats.
Identities = 85/397 (21%), Positives = 154/397 (38%), Gaps = 60/397 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA------N 87
F +FS+ I+A + +S + ++ + ++ FL + A
Sbjct: 429 SFQMSFSATAALIAAYAW--------WSERNARKFSRAGRKAAERGFLARMVAPAVATGG 480
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P
Sbjct: 481 TSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQ 540
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
VM GL + HIA ++ + G +P + V + L+ V T ++ + ++
Sbjct: 541 VMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALPLLAA 600
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEA 266
+ + P+ PD+++SE LV + ++ N P FI WKSA +
Sbjct: 601 GLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFIIDNWKSAYLIKQIIE 657
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
P QK + SS F+C ++ C R + + M ++C
Sbjct: 658 P--QKGTKKNNAGSS----------SGFIC-EEGVCFVTLRDGRTLSYTADETMRDVACN 704
Query: 327 LSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITII-------------------- 365
+ DI I I + +L+I+ L +G+LEI +
Sbjct: 705 IGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPALVPPK 764
Query: 366 --------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 765 PGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 801
Score = 77.9 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 9/139 (6%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
+ + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 211 AIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRVPPPQTLSAEF 270
Query: 72 K--ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPIL 122
I++++ I+ I A+ + I +A+IL+I L
Sbjct: 271 SEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAGLAHILSISGL 330
Query: 123 SFVVIPAGLIAILLMILSL 141
+ ++ L + +L
Sbjct: 331 HMALAAGVVMLALRSLFAL 349
>gi|163843410|ref|YP_001627814.1| ComEC/Rec2-related protein [Brucella suis ATCC 23445]
gi|163674133|gb|ABY38244.1| ComEC/Rec2-related protein [Brucella suis ATCC 23445]
Length = 843
Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats.
Identities = 84/397 (21%), Positives = 153/397 (38%), Gaps = 60/397 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA------N 87
F +FS+ I+A + +S + ++ + ++ FL + A
Sbjct: 429 SFQMSFSATAALIAAYAW--------WSERNARKFSRAGRKAAERGFLARMVAPAVATGG 480
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P
Sbjct: 481 TSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQ 540
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
VM GL + HIA ++ + G +P + V + L+ V T ++ + ++
Sbjct: 541 VMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALPLLAA 600
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI-SNYSNPPSFIFSQWKSALITPFHEA 266
+ + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 601 GLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFPVNRDRPSKFTIDNWKSAYLIKQIIE 657
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
P QK + SS F+C ++ C R + + M ++C
Sbjct: 658 P--QKGTKKNNAGSS----------SGFIC-EEGVCFVTLRDGRTLSYTADETMRDVACN 704
Query: 327 LSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITII-------------------- 365
+ DI I I + +L+I+ L +G+LEI +
Sbjct: 705 IGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPALVPPK 764
Query: 366 --------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 765 PGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 801
Score = 78.7 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 9/139 (6%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
+ + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 211 AIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRVPPPQTLSAEF 270
Query: 72 K--ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPIL 122
I++++ I+ I A+ + I +A+IL+I L
Sbjct: 271 SEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAGLAHILSISGL 330
Query: 123 SFVVIPAGLIAILLMILSL 141
+ ++ L + +L
Sbjct: 331 HMALAAGVVMLALRSLFAL 349
>gi|306844009|ref|ZP_07476604.1| ComEC/Rec2-related protein [Brucella sp. BO1]
gi|306275764|gb|EFM57488.1| ComEC/Rec2-related protein [Brucella sp. BO1]
Length = 843
Score = 220 bits (559), Expect = 4e-55, Method: Composition-based stats.
Identities = 80/397 (20%), Positives = 150/397 (37%), Gaps = 60/397 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA------N 87
F +FS+ I+A + +S + ++ + ++ FL + A
Sbjct: 429 SFQMSFSATAALIAAYAW--------WSERNARKFSRAGRKAAERGFLARMVAPAVATGG 480
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P
Sbjct: 481 TSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQ 540
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
VM GL + HIA ++ + G IP + V + L+ V T ++ + ++
Sbjct: 541 VMGVGLWAVRHIAAFVASWSPDGNPGAIPGLALVLWTMALLVAVAFTTRLKLLALPLLAA 600
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEA 266
+ + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 601 GLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIKKIIE 657
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
P + + F+C ++ C R + + M ++C
Sbjct: 658 PQ------------KGTKKNTAGNSGGFIC-EEGVCFVTLRDGRTLSYTADETMRDVACN 704
Query: 327 LSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITIIPPSNDNDKV----------- 374
+ DI I I + +L+I+ L +G+LEI + +
Sbjct: 705 IGDIAILAISGKGAECESEQTLVISKRDLALKGTLEIRLGGQLSIASDEADSKPALVPPK 764
Query: 375 -----------------KFIIKSAIENLHFPWTKHRI 394
+ + A++ PW HR+
Sbjct: 765 PGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 801
Score = 75.6 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 55/139 (39%), Gaps = 9/139 (6%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
+ + G ARL PSG PG +DF+F +Y+ GI A G+F PK I
Sbjct: 211 AIGSGLTGFARLRVPSGQVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRVPPPQTLSAEF 270
Query: 72 K--ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPIL 122
I++++ I+ I A+ + I +A+IL+I L
Sbjct: 271 SEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAGLAHILSISGL 330
Query: 123 SFVVIPAGLIAILLMILSL 141
+ ++ L + +L
Sbjct: 331 HMALAAGVVMLALRSLFAL 349
>gi|189024298|ref|YP_001935066.1| ComEC/Rec2-related protein [Brucella abortus S19]
gi|237815567|ref|ZP_04594564.1| ComEC/Rec2-related protein [Brucella abortus str. 2308 A]
gi|189019870|gb|ACD72592.1| ComEC/Rec2-related protein [Brucella abortus S19]
gi|237788865|gb|EEP63076.1| ComEC/Rec2-related protein [Brucella abortus str. 2308 A]
Length = 849
Score = 219 bits (557), Expect = 8e-55, Method: Composition-based stats.
Identities = 84/397 (21%), Positives = 153/397 (38%), Gaps = 60/397 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA------N 87
F +FS+ I+A + +S + ++ + ++ FL + A
Sbjct: 435 SFQMSFSATAALIAAYAW--------WSERNARKFSRAGRKAAERGFLARMVAPAVATGG 486
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P
Sbjct: 487 TSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMSLQLDWLPLQ 546
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
VM GL + HIA ++ + G +P + V + L+ V T ++ + ++
Sbjct: 547 VMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALPLLAA 606
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEA 266
+ + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 607 GLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIKQIIE 663
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
P QK + SS F+C ++ C R + + M ++C
Sbjct: 664 P--QKGTKKNNAGSS----------SGFIC-EEGVCFVTLRDGRTLSYTADETMRDVACN 710
Query: 327 LSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITII-------------------- 365
+ DI I I + +L+I+ L +G+LEI +
Sbjct: 711 IGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPALVPPK 770
Query: 366 --------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 771 PGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 807
Score = 78.7 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 9/139 (6%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
+ + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 217 AIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRVPPPQTLSAEF 276
Query: 72 K--ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPIL 122
I++++ I+ I A+ + I +A+IL+I L
Sbjct: 277 SEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAGLAHILSISGL 336
Query: 123 SFVVIPAGLIAILLMILSL 141
+ ++ L + +L
Sbjct: 337 HMALAAGVVMLALRSLFAL 355
>gi|62290058|ref|YP_221851.1| ComEC/Rec2 family protein [Brucella abortus bv. 1 str. 9-941]
gi|82699985|ref|YP_414559.1| ComEC/Rec2-like protein [Brucella melitensis biovar Abortus 2308]
gi|254697503|ref|ZP_05159331.1| ComEC/Rec2-related protein [Brucella abortus bv. 2 str. 86/8/59]
gi|254730400|ref|ZP_05188978.1| ComEC/Rec2-related protein [Brucella abortus bv. 4 str. 292]
gi|260546610|ref|ZP_05822349.1| DNA uptake protein [Brucella abortus NCTC 8038]
gi|260758104|ref|ZP_05870452.1| DNA uptake protein [Brucella abortus bv. 4 str. 292]
gi|260761928|ref|ZP_05874271.1| DNA uptake protein [Brucella abortus bv. 2 str. 86/8/59]
gi|62196190|gb|AAX74490.1| ComEC/Rec2 family protein, hypothetical [Brucella abortus bv. 1
str. 9-941]
gi|82616086|emb|CAJ11124.1| ComEC/Rec2-related protein [Brucella melitensis biovar Abortus
2308]
gi|260095660|gb|EEW79537.1| DNA uptake protein [Brucella abortus NCTC 8038]
gi|260668422|gb|EEX55362.1| DNA uptake protein [Brucella abortus bv. 4 str. 292]
gi|260672360|gb|EEX59181.1| DNA uptake protein [Brucella abortus bv. 2 str. 86/8/59]
Length = 843
Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats.
Identities = 84/397 (21%), Positives = 153/397 (38%), Gaps = 60/397 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA------N 87
F +FS+ I+A + +S + ++ + ++ FL + A
Sbjct: 429 SFQMSFSATAALIAAYAW--------WSERNARKFSRAGRKAAERGFLARMVAPAVATGG 480
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P
Sbjct: 481 TSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMSLQLDWLPLQ 540
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
VM GL + HIA ++ + G +P + V + L+ V T ++ + ++
Sbjct: 541 VMGVGLWAVRHIAAFVASWSPDGNPGAMPGPALVLWTMALLVAVAFTTRLKLLALPLLAA 600
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEA 266
+ + P+ PD+++SE LV + ++ N P F WKSA +
Sbjct: 601 GLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVNRDRPSKFTIDNWKSAYLIKQIIE 657
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
P QK + SS F+C ++ C R + + M ++C
Sbjct: 658 P--QKGTKKNNAGSS----------SGFIC-EEGVCFVTLRDGRTLSYTADETMRDVACN 704
Query: 327 LSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITII-------------------- 365
+ DI I I + +L+I+ L +G+LEI +
Sbjct: 705 IGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEIRLGGQLSIASDKADSKPALVPPK 764
Query: 366 --------PPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
P + + A++ PW HR+
Sbjct: 765 PGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 801
Score = 78.7 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 9/139 (6%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
+ + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 211 AIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRVPPPQTLSAEF 270
Query: 72 K--ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPIL 122
I++++ I+ I A+ + I +A+IL+I L
Sbjct: 271 SEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAGLAHILSISGL 330
Query: 123 SFVVIPAGLIAILLMILSL 141
+ ++ L + +L
Sbjct: 331 HMALAAGVVMLALRSLFAL 349
>gi|163760897|ref|ZP_02167976.1| hypothetical protein HPDFL43_07122 [Hoeflea phototrophica DFL-43]
gi|162281941|gb|EDQ32233.1| hypothetical protein HPDFL43_07122 [Hoeflea phototrophica DFL-43]
Length = 809
Score = 215 bits (548), Expect = 9e-54, Method: Composition-based stats.
Identities = 97/391 (24%), Positives = 173/391 (44%), Gaps = 29/391 (7%)
Query: 23 LSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLN 82
L PS PG F +F++ + + ++ WT S +
Sbjct: 415 LLSPSAVVGPG-FQMSFAATAAL-------IAAYAALSRRKAQRDWTPAPASHMLIVPGW 466
Query: 83 EI--------RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
I A + +F HFH GL+AN+LA+P+++ VV+PAGL+A+
Sbjct: 467 LIWLFKAAVGLAITSLVAGLATGLFSAHHFHRFAGNGLLANMLAMPLVTLVVMPAGLLAM 526
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
LLM LD +P M GL +I +AH I + +G+IP + F+++VF +
Sbjct: 527 LLMPFCLDQLPLQAMGAGLGGVIAVAHYIDGMGGDVLVGQIPFHATAVAGAGFIVLVFLR 586
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ 254
+ +R G ++G+ ++ P +LISE G LV L L SN P +F+F Q
Sbjct: 587 SRLRLAGFALLGLGALLALPPLAPNRPQILISEDGRLVGLYGATGLASNAKRPSAFVFGQ 646
Query: 255 WKSALITPFHEAPHVQKEDLQEKNQSSLKEI----LRSMQPRKFLCIKKSFCVGCHRSDV 310
W++AL P H P +++ + + + +P +F C ++ C H +
Sbjct: 647 WQTALGGPNHRTPAMRRPLVSDNQLPGETLTPLLQAAAQEPSRFHCAERGMCAAGH-AGA 705
Query: 311 IVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPP--- 367
+ + ++I +C +D+++ +I ++ + + L+T L+ G+L I +
Sbjct: 706 TIIAIDHPELIGPACDRADLVVVSIPVYMSRCRSGATLVTARSLRTTGALAIRMAQNRLP 765
Query: 368 -----SNDNDKVKFIIKSAIENLHFPWTKHR 393
+ +F I SA++ + PWT R
Sbjct: 766 TAAQDRGSGTRPRFAIDSALQGVVRPWTIQR 796
Score = 82.9 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 46/225 (20%), Positives = 88/225 (39%), Gaps = 13/225 (5%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY---SSES 64
++P P I G ARLS PSGP PG +DF F ++ GI A G+F+ P+ +
Sbjct: 202 HEPVPVGAMIAGRARLSSPSGPVLPGGYDFAFRAFVDGIGAHGFFFQAPEKLALRPPDGG 261
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANIL 117
+ +++ + +R+ + A+ + I + +A+IL
Sbjct: 262 MAENFKLGLRGVRERIASRVRSVLPGDAGGIAAALTVSDRRGISRPTVEALRATGLAHIL 321
Query: 118 AIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI-SVAHNEFCIGRIP 176
AI L + AGL+ + L ++ V W + + + + A+ G +
Sbjct: 322 AISGLHMAL-AAGLLYVGLRLIMAGFPSL-VEGWPVKKLAAAGALVTASAYLLISGGSVA 379
Query: 177 ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
++ L+ V + ++ + +IIL + P
Sbjct: 380 TQRAWVMLSIMLIAVILDRPALTMRNVALAAIVIILLSPSAVVGP 424
>gi|319405824|emb|CBI79456.1| Competence protein [Bartonella sp. AR 15-3]
Length = 754
Score = 213 bits (541), Expect = 5e-53, Method: Composition-based stats.
Identities = 71/379 (18%), Positives = 151/379 (39%), Gaps = 36/379 (9%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
I G+ ++ F +FS+ I+A ++ + + + + +
Sbjct: 408 AIAGLVTVAISPHEILGPSFQMSFSATAALIAAFAWWSEGHFSYKGNTAPSYVGGRVLRF 467
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ S ++ +++ +++ I+ HF + + G+I+N+LA PI+S +IP GL+++
Sbjct: 468 VFLSVVSTCMSSLV--AGSASGIYAAYHFSNVALLGIISNVLAFPIVSIFIIPFGLLSVF 525
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
M L L+ P VM +G ++I IA+ + G IP ++ + + + + + F KT
Sbjct: 526 SMFLGLEWWPLQVMGFGTSLMIKIAYVVKAISPVLNPGFIPLSALILLSIGLVGLTFLKT 585
Query: 196 NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQW 255
IR I I++ L+I++ +V +++ + L ++ +P F S W
Sbjct: 586 AIRFFFGFFILGGILVCI---MQSPIQLIIADNMKIVGVLNDDILYIDHYHPSKFTISLW 642
Query: 256 KSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVL 315
+ + P L+ + F+C + C + + +L
Sbjct: 643 EKSFRINKTIKPTKIGPSLKGQ----------------FIC-DDNICTTLLENGFKIAIL 685
Query: 316 KRKDMIRLSCQLSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITIIPPSNDNDKV 374
+ C +DI+I N +++ TP+ L +GS+ +
Sbjct: 686 YGET---DHCVKADIIIRKHATSNRTCDTTNAIIFTPQQLLSRGSIILNKDKN------- 735
Query: 375 KFIIKSAIENLHFPWTKHR 393
+ + PW HR
Sbjct: 736 ---TLWSSSGFNRPWNIHR 751
Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/217 (18%), Positives = 75/217 (34%), Gaps = 16/217 (7%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS--SESHNTWTW 70
+ G +L SG PG +DF+F +Y+K I A G++ PK I +
Sbjct: 209 PGDGLYGKVKLRALSGAIRPGSYDFSFHNYFKRIGAQGFYLGTPKKILVFQPNTMLGTVL 268
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPILS 123
+KI +++ ++ +G ++ + I +A+IL+I L
Sbjct: 269 QKIENLRMQMTEKVSKAVGGEEGKVSAALITGQRGGISNNTNEALRIAGLAHILSISGLH 328
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR-ISVAHNEFCIGRIPETSFVT 182
++ + I+ + + + + I IA ++ + I
Sbjct: 329 MALLSGVVFIIVRSFFAFFPVFSSY--YSVKKIAAIAALIVTAFYLILSGSNIAAQRSFL 386
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
+V L + C H M I L T S
Sbjct: 387 MVAVMLTAILCN----HSAITMRNFAIAGLVTVAISP 419
>gi|319408414|emb|CBI82069.1| Competence protein [Bartonella schoenbuchensis R1]
Length = 653
Score = 203 bits (515), Expect = 5e-50, Method: Composition-based stats.
Identities = 88/362 (24%), Positives = 158/362 (43%), Gaps = 38/362 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +FS+ I+ G+ +S + Y+ + ++ + + S L I + GS
Sbjct: 314 SFQMSFSATAALIAVFGW-WSERRSSYTGRTTPSYVGGGVLRLVLSPLILICVSSLVAGS 372
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
++ I+ HF + G+I+NILA+PI+ V+P GLIA M++ L+++P +M +G+
Sbjct: 373 -ASGIYAAYHFANVAPLGMISNILALPIVFIFVMPFGLIAAFAMLVGLESLPLQIMGFGI 431
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
++ IA+ ++ F G +P ++ V + + + + F KT IR SI I I I +
Sbjct: 432 SLVTKIAYAVTAISPAFHPGFMPLSALVLLSLGLVGLTFLKTPIRFFFSIFIFIGIFVCM 491
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKED 273
S L+I+ +LV ++++ L + F S W+++ P
Sbjct: 492 V---SSPVQLIIANNMSLVGIINERKLYIDRYYASKFTLSIWENSFHAQNAIKPTETGPS 548
Query: 274 LQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILIT 333
L + F+C + C + + V VL K C +DI+I
Sbjct: 549 LNGQ----------------FIC-NDNICTAFLENKLKVAVLHGKT---DQCITADIVI- 587
Query: 334 TIRDINTKLCN--VSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
I ++C+ + T + L +GS+ +T K II S+ H PW
Sbjct: 588 EASTIRNQICDKIAPITFTLQQLLSRGSVIMT---------KSGNIIWSS-NGFHRPWNI 637
Query: 392 HR 393
HR
Sbjct: 638 HR 639
Score = 66.0 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 51/241 (21%), Positives = 91/241 (37%), Gaps = 16/241 (6%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY--SSESHN 66
D + + G RL SGP PG +DF+F +Y+K I A G + P I ++
Sbjct: 93 DGLASGDGLYGKVRLRALSGPVRPGSYDFSFYNYFKRIGAHGIYLGKPIKISVTPPDTIL 152
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP--------VYGLIANILA 118
+KI +++ +I IG A+ + I V GL A+IL+
Sbjct: 153 DRVLQKIENLRIVMTQKINTAIGGEEGQIAAALITGQRGGISKDTNKALRVAGL-AHILS 211
Query: 119 IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
I L ++ ++ ++ L+L F +A I+ + I
Sbjct: 212 ISGLHMALLSGMVLIVIRSFLAL-FPNFSSYYSAKKFAAVVALIITAFYLVLSGMNIAAQ 270
Query: 179 SFVTIVVEFLLMVFCKTN---IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
+V L+ V C + +R+ + +T+ + S S + S L+A+
Sbjct: 271 RSFVMVSVLLIAVLCNHSAVTMRNFAIAGL-VTVATIPHAILSPSFQMSFSATAALIAVF 329
Query: 236 D 236
Sbjct: 330 G 330
>gi|114705893|ref|ZP_01438796.1| ComEC/Rec2 family protein, putative [Fulvimarina pelagi HTCC2506]
gi|114538739|gb|EAU41860.1| ComEC/Rec2 family protein, putative [Fulvimarina pelagi HTCC2506]
Length = 801
Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats.
Identities = 73/380 (19%), Positives = 145/380 (38%), Gaps = 38/380 (10%)
Query: 15 TTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKIS 74
+I IA L+ F +F++ + G F S
Sbjct: 404 VSIAAIAILALSPHAVMTASFQMSFAATIGLVGVYGAFSRYRGGRSRDISE--------G 455
Query: 75 SIKQSFLNEI-RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
+++ F + A + + + I HF +GL+AN+L +P+ S +++P L+
Sbjct: 456 ALRTVFFFLVGTAATALIAGLATTPYSIFHFQRFAPFGLVANLLVMPLFSLLIMPMALLG 515
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
++LM + LD IP + GLD +I IA ++ + G + ++ +T+ L+
Sbjct: 516 VVLMPVGLDAIPLTAVGMGLDALIAIAFDLASQLPDQSTGLVRPSALITLSAALLIFCIP 575
Query: 194 KTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFS 253
+R + + +++ + +P+ LI E G AL++ T+ + P SF+
Sbjct: 576 VGRLRWLAVPFLATGLVMAI--DRAATPEFLIFEDGKTFALIENGTIAYSKGRPNSFVSD 633
Query: 254 QWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVG 313
QW A + E + LK+ + C S + V
Sbjct: 634 QWDRAY----------RAEGTERGLIPGLKD------------CESKICRFTTPSGITVA 671
Query: 314 VLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDK 373
++ +C ++I + + + L+T L++ GSL I P S +
Sbjct: 672 YTTDYRLLGEACDSAEIAFVARAARTRRCRSGAHLVTLRTLRRSGSLAIARDPSSGE--- 728
Query: 374 VKFIIKSAIENLHFPWTKHR 393
++ ++ W +HR
Sbjct: 729 --IVVSRSVLAAPADWNRHR 746
Score = 79.8 bits (195), Expect = 7e-13, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPK---- 57
+ + ++D EG+ RL PP+GPAFPG +DF F Y++G+ A G+ IPK
Sbjct: 191 IVVAGEHDVMRPGDRFEGLVRLRPPAGPAFPGSYDFAFVPYFEGLGAYGFSLGIPKPRSE 250
Query: 58 --MIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV------ 109
+ + ++ ++ + IRA I A A+ + + I
Sbjct: 251 LSTEGPPPTLSEQVAIAVADLRGMVTDRIRAIIPGQPGAVAAALVTGQRNGIDEETSEAL 310
Query: 110 -YGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI 159
+A+ILAI L ++ A++ + SL + + W + I +
Sbjct: 311 RATGLAHILAISGLHVALV--AGFAMVSIRRSLVLVGHLALVWPIKKIAAV 359
>gi|85716979|ref|ZP_01047942.1| ComEC/Rec2-related protein [Nitrobacter sp. Nb-311A]
gi|85696181|gb|EAQ34076.1| ComEC/Rec2-related protein [Nitrobacter sp. Nb-311A]
Length = 735
Score = 201 bits (510), Expect = 2e-49, Method: Composition-based stats.
Identities = 66/367 (17%), Positives = 148/367 (40%), Gaps = 43/367 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ G+ A+ +PKM+ + + T + + L A
Sbjct: 370 SFQMSFAATL-GLVALVQ-VGMPKMLATPDHSPTAKAALWGGREIAML----ALASFVAG 423
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + ++ HFH + YG++AN+LA+P++S +V+P GL+ + M D + + +M +G+
Sbjct: 424 LATTPYVAFHFHRVTPYGMVANLLAMPVVSALVMPVGLLGLAAMPFGFDGVFWRLMDFGI 483
Query: 154 DIIIHIAHRISVAHNEFC-IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+ ++ +A ++ + + +L+ +T +R G ++ G+ +
Sbjct: 484 EWMVAVAQGVTELPGAIGRVSAFGAGPLLAATAGIILLGLLRTPLRWSGVVISGLAVAWS 543
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLI-SNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
+ PD+LIS +G VA+ ++ + + SF +W +A
Sbjct: 544 LA---ATPPDILISAEGRNVAVRGEDGRLRLVSAGKDSFAVREWLAA------------D 588
Query: 272 EDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL 331
D + +L E + CV +V + +R + +R C ++++
Sbjct: 589 GDERGPADPALAE---------GVSCDDEGCVVKLSGGGLVALTRRPEAMRDDCVRAELM 639
Query: 332 ITTIRDINTKLCNVSLLITPEILQKQGSLEITIIP--------PSNDNDKVKFIIKSAIE 383
+T + C +I L+++G+L + P + + ++
Sbjct: 640 VTQWE--APEGCRAQ-VIDRNRLRREGALALWRAPGASGSGVSTDSTSRPRFAVVAVRPA 696
Query: 384 NLHFPWT 390
L PW+
Sbjct: 697 GLERPWS 703
Score = 55.6 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 40/110 (36%), Gaps = 3/110 (2%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ K P + +E ARL PP P PG FDF Y+ GI A G+ K +
Sbjct: 143 LSVRKGAAP-AVGSFVELKARLQPPLMPVRPGSFDFARDMYFHGIGASGFVMGAIKTVSP 201
Query: 62 SESHNTWTW--KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV 109
+ ++ + IR + A A+ L I
Sbjct: 202 PSGGGLMLRYATLMQELRDAIDARIRLVLSGDSRAIATALLTGRRDAITT 251
>gi|75676033|ref|YP_318454.1| ComEC/Rec2-related protein [Nitrobacter winogradskyi Nb-255]
gi|74420903|gb|ABA05102.1| ComEC/Rec2-related protein [Nitrobacter winogradskyi Nb-255]
Length = 778
Score = 199 bits (505), Expect = 7e-49, Method: Composition-based stats.
Identities = 70/377 (18%), Positives = 151/377 (40%), Gaps = 53/377 (14%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ G+ A+ +P+M+ + + T + + L A
Sbjct: 403 SFQMSFAATL-GLVALVQ-VGMPRMLATPDHSPTAKAALWGGREIAML----ALASFVAG 456
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + + HFH + YG+ AN+LA+P++S +V+PAGL+ + M D + + +M +G+
Sbjct: 457 LATTPYAAFHFHRVTPYGMAANLLAMPVISALVMPAGLLGLAAMPFGFDGVFWRLMDFGI 516
Query: 154 DIIIHIAHRISVAHNEFC-IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+ ++ +A + I + +L+ +T +R G+I++G+ I+
Sbjct: 517 EWMVAVAQGVVELPGSIGRIAAFGTGPLLAATAGIVLLGLLRTPLRWGGAIVVGLAIVWS 576
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISN-YSNPPSFIFSQWKSALITPFHEAPHVQK 271
PD+LIS +G VA+ + + + SF +W +A
Sbjct: 577 LAV---KPPDILISAEGRNVAVRGGDGRLRLISTGKDSFTVREWLAA------------D 621
Query: 272 EDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL 331
D++ +L E + + CV IV + + + ++ C ++++
Sbjct: 622 GDVRGPTDPTLAE---------GVSCDDAGCVVKASGGGIVALTRHPEALQDDCARAELI 672
Query: 332 ITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIE-------- 383
+T + L + +I L+++G+L + P S+ D + + +
Sbjct: 673 VTRWQAPEGCL---AHVIDQNRLRREGALALWRTPNSSRQDASRLDVSRSGASKPGASRP 729
Query: 384 ----------NLHFPWT 390
L PW+
Sbjct: 730 GFAVDAVRPAGLKRPWS 746
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 3/110 (2%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ K P + +E ARL PP P PG +DF Y++GI A G+ K + S
Sbjct: 176 LSVRKGAAP-AVGSFVELKARLQPPLTPVRPGSYDFARDMYFQGIGASGFVMGAIKTVAS 234
Query: 62 SESHNTWTW--KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV 109
+ + ++ + IR + A A+ L I
Sbjct: 235 PPAGGIALRYAALMQELRDAIDARIRLVLSGDSRAIATALLTGRRDAITP 284
>gi|222148889|ref|YP_002549846.1| hypothetical protein Avi_2562 [Agrobacterium vitis S4]
gi|221735875|gb|ACM36838.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 1007
Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 89/368 (24%), Positives = 149/368 (40%), Gaps = 53/368 (14%)
Query: 23 LSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLN 82
L PS P L +F++ + I+ + P+M + T + + ++
Sbjct: 434 LLSPSQVMGPSL-QMSFAATFALIAGFDLWRQRPRMPPILPAIPALT---VLKPLMTLVS 489
Query: 83 EIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD 142
I G S ++F HFH + ++GL AN+LA P++S +V+PA +I +LLM LD
Sbjct: 490 GIL-MTSALGGFSTAMFSAAHFHRVGLHGLEANLLAAPLMSMLVMPAAMIGVLLMPFGLD 548
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
P +M GL+ ++ IA +++ N F GR L++ KT +R IG
Sbjct: 549 QWPIQLMGLGLEGVLMIASKVASWGNGFTFGRFEWWFLPVSATGLLILTLMKTRLRLIGV 608
Query: 203 IMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL-----ISNYSNPPSFIFSQWKS 257
M+ PDL ISE G L AL + +N PPSFIF+QW+S
Sbjct: 609 AMMLTAFGYEAIKTDPPLPDLAISEDGQLFALFRTDDRHLLTIATNKKRPPSFIFNQWRS 668
Query: 258 ALITPFHEAPHV----------QKEDLQEKNQSSLKEILRSM------------------ 289
L AP + + K + +E R+
Sbjct: 669 VLDIADPIAPEILPKLAAVEIETGQQGAGKGEDKARETTRAGKTKTGGQKVKGREPVEPQ 728
Query: 290 ---------------QPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITT 334
+P F C +FC+ + V +++ +D + +C LSD++++T
Sbjct: 729 QAMAEMTTAKEKADKKPDLFHCRTDAFCLARLSNGWTVSLVQNRDYNQAACALSDLIVST 788
Query: 335 IRDINTKL 342
+ +
Sbjct: 789 EAGRDAEC 796
Score = 83.7 bits (205), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/104 (38%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
K+ PF IEG ARLSPPSGPA PGL DF F+SY+ G AIGYFY PK
Sbjct: 213 GKHVPFNPGDWIEGRARLSPPSGPALPGLNDFAFASYFAGTGAIGYFYQPPKPFLPGPEI 272
Query: 66 NT---WTWKKIS------SIKQSFLNEIRANIGTYGSASASIFL 100
W I ++ + IRA + A A +
Sbjct: 273 APPDFWERAGIKLDETTQELRNGISDRIRAIVPGDAGAFAVAIV 316
Score = 41.3 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 335 IRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
+ L ++T L++ G++EIT+ P+ I +A +N + PWT+HR
Sbjct: 910 AANAGPMLSRPPKVLTRNDLRRFGAMEITLGDPATRT----LHIVTAFQNQYRPWTRHR 964
>gi|213018700|ref|ZP_03334508.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|212995651|gb|EEB56291.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 600
Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats.
Identities = 72/367 (19%), Positives = 143/367 (38%), Gaps = 52/367 (14%)
Query: 26 PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR 85
P PG F +FS+ +++ ++ + K I ++ +
Sbjct: 280 PEAILKPG-FQMSFSAVLALVASY-----------QINANKLFKIKIIKYFVSIMISSVI 327
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
A++ + + I +F+ + G+I N++AIPI++ ++IP G+I +LL+ L ++ I
Sbjct: 328 ASL------ATVPYTIYNFNYFSISGIITNLIAIPIVTLIIIPLGIIYVLLIPLGIEWII 381
Query: 146 FGVMAWGLDIIIHIAHRISVA-HNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIM 204
+ +D I+ I + I+ + P +S + I + L + + N R G
Sbjct: 382 APFIERPIDSILCITNAIASLQYLVIPTRTFPGSSIIIITLGLLWLCLWERNWRFFGIFF 441
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFH 264
I + I F+ +PD+L+S NL D N L S +F+ W
Sbjct: 442 IVLGI---FSSAMYTTPDILVSAD-NLAVKEDDNLLYSLTRKNRNFVVKTW--------- 488
Query: 265 EAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLS 324
++ Q+ + + K L C+ ++ V + +++ I +
Sbjct: 489 ---------AKQNGQNQIVNHTKFSNSNKRLKCNDYGCIYNKGNNKSVLLAHKREDILEN 539
Query: 325 CQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIEN 384
C D++I + N CN +I L+ G+ + + IK +
Sbjct: 540 CNNVDLVI-QLSKFNYPACNTK-IIKYADLEAYGTHSVWLTDSG---------IKVSKVR 588
Query: 385 LHFPWTK 391
+ PW K
Sbjct: 589 SNRPWHK 595
Score = 40.2 bits (92), Expect = 0.58, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYF 52
TK + ++ A+L PP +DF +YY+ ISA G+
Sbjct: 66 TKAEEGIKIGDQVKLSAKLFPPKIAPSEYAYDFARIAYYQKISATGFA 113
>gi|190571303|ref|YP_001975661.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190357575|emb|CAQ55014.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 674
Score = 196 bits (499), Expect = 4e-48, Method: Composition-based stats.
Identities = 72/367 (19%), Positives = 143/367 (38%), Gaps = 52/367 (14%)
Query: 26 PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR 85
P PG F +FS+ +++ ++ + K I ++ +
Sbjct: 354 PEAILKPG-FQMSFSAVLALVASY-----------QINANKLFKIKIIKYFVSIMISSVI 401
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
A++ + + I +F+ + G+I N++AIPI++ ++IP G+I +LL+ L ++ I
Sbjct: 402 ASL------ATVPYTIYNFNYFSISGIITNLIAIPIVTLIIIPLGIIYVLLIPLGIEWII 455
Query: 146 FGVMAWGLDIIIHIAHRISVA-HNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIM 204
+ +D I+ I + I+ + P +S + I + L + + N R G
Sbjct: 456 APFIERPIDSILCITNAIASLQYLVIPTRTFPGSSIIIITLGLLWLCLWERNWRFFGIFF 515
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFH 264
I + I F+ +PD+L+S NL D N L S +F+ W
Sbjct: 516 IVLGI---FSSAMYTTPDILVSAD-NLAVKEDDNLLYSLTRKNRNFVVKTW--------- 562
Query: 265 EAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLS 324
++ Q+ + + K L C+ ++ V + +++ I +
Sbjct: 563 ---------AKQNGQNQIVNHTKFSNSNKRLKCNDYGCIYNKGNNKSVLLAHKREDILEN 613
Query: 325 CQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIEN 384
C D++I + N CN +I L+ G+ + + IK +
Sbjct: 614 CNNVDLVI-QLSKFNYPACNTK-IIKYADLEAYGTHSVWLTDSG---------IKVSKVR 662
Query: 385 LHFPWTK 391
+ PW K
Sbjct: 663 SNRPWHK 669
Score = 40.2 bits (92), Expect = 0.58, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYF 52
TK + ++ A+L PP +DF +YY+ ISA G+
Sbjct: 140 TKAEEGIKIGDQVKLSAKLFPPKIAPSEYAYDFARIAYYQKISATGFA 187
>gi|115524577|ref|YP_781488.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris BisA53]
gi|115518524|gb|ABJ06508.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris BisA53]
Length = 765
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 70/388 (18%), Positives = 155/388 (39%), Gaps = 42/388 (10%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ F I L P P F +F++ G+ A+ +P + + +
Sbjct: 370 VDRQAITFRTLAIAALIVLLVAPEALVHP-SFQMSFAATL-GLVALVQI-GMPALFAAPD 426
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ +++ + I A + + + HFH + YG+IAN+LA+P++S
Sbjct: 427 H----SATARAALWGAREIAILALASLVAGLATTPYAAYHFHRVTPYGVIANLLAMPVVS 482
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSFVT 182
+V+PAGL+ +L M D + + +M G+D ++ +A ++ I +
Sbjct: 483 ALVMPAGLLGLLAMPFGFDGVFWHIMEVGIDWMVIVAQGVAALPGAVGRIAAFGAGPLLL 542
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+ +++ +T +R+ G +++ +++ P PD+LI+ G VA+ + +
Sbjct: 543 ASLGLIMIGLLRTPLRYAGGLLLVASVLWAIATPQ---PDILIAADGRHVAVRGADAKLR 599
Query: 243 NYSNP-PSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
+ +F+ +W +A D + +SL + ++
Sbjct: 600 LLQDGKDAFLVKEWLAA------------DADGRAVGDASLSN---------GVSCDEAA 638
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLE 361
CV +V + + + + C+ + +LIT R + C +L I E L+++G+
Sbjct: 639 CVAALADGRLVSLARWPEAVVEDCEKAAVLIT--RRPVPEGC-AALAIDAETLRREGAKT 695
Query: 362 ITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ + + PW
Sbjct: 696 LR------QTEGKWVLRAVRPAGRDRPW 717
Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 48/246 (19%), Positives = 88/246 (35%), Gaps = 15/246 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSI--PKMI 59
LS+ K P + +E ARL+PP P PG +DF Y++GI A G+ PK
Sbjct: 172 LSVKKGTAP-SVGSFVELKARLTPPLQPLRPGAYDFGRDLYFQGIGATGFVTGAIKPKPA 230
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGL 112
+ + ++ + IR + A A+ L I
Sbjct: 231 PNEPGFALRYAATLQGLRDAIDARIRQTLSGDSRAIATALLTGKRDAITTPVNDAMFVSG 290
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI 172
+ ++L+I V+ + + +L+L +P + + + + A + A
Sbjct: 291 LGHVLSISGYHMAVVAGVVFFTVRALLAL--VPVLTVTFPIKKVAAAAALAAAAFYLVLS 348
Query: 173 GRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS---FSPDLLISEKG 229
G T ++ +L+ + +I+L P + S + +
Sbjct: 349 GAEVATQRSFLMTAVVLIAVMVDRQAITFRTLAIAALIVLLVAPEALVHPSFQMSFAATL 408
Query: 230 NLVALV 235
LVALV
Sbjct: 409 GLVALV 414
>gi|83311901|ref|YP_422165.1| membrane metal-binding protein [Magnetospirillum magneticum AMB-1]
gi|82946742|dbj|BAE51606.1| Predicted membrane metal-binding protein [Magnetospirillum
magneticum AMB-1]
Length = 714
Score = 193 bits (490), Expect = 5e-47, Method: Composition-based stats.
Identities = 54/360 (15%), Positives = 136/360 (37%), Gaps = 37/360 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ I+ Y P+ +H W + +I + +
Sbjct: 363 SFQMSFAAVAAMIA--VYESLTPRQTAWRAAHPGW----LPAIGLYVFGTVVTTL--IAG 414
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +++ I HF+ V+ + AN++A+P+ F V+P L+ +L+ L+++ + WG+
Sbjct: 415 FATAVYGIHHFNRFAVWSVAANMIAVPLTGFWVMPWALVMFVLLPFGLESLALVPLGWGV 474
Query: 154 DIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+ + +A ++ + + +P + V + + + R G + + + + +
Sbjct: 475 EGVNWVATWVASWPSSAVTLPILPLWAMVVFTLGGCWLCLWRGRWRWWGLLPMAVAVASM 534
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
++ PDLL+ +G+ +AL + + W
Sbjct: 535 ---AFARPPDLLVDGRGDGLALRTGEGRLLLNGKGGRILKDTWSR--------------- 576
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
+ ++ + +S L ++ C+ +V ++K +D +C +DI++
Sbjct: 577 --RAGPEAPERWPKKSSSRDGRLRCDETGCL-WRVDGKVVALVKDEDNPEKACAGADIVV 633
Query: 333 TTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTKH 392
+++ T +++ L ++G + + P + A PW H
Sbjct: 634 SSVPLRGT-CREARVIVDRFDLWRRGPHSLWLGPNGAS------VETVAGWQGDRPWAWH 686
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/225 (18%), Positives = 75/225 (33%), Gaps = 16/225 (7%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE--SHNTWTW 70
I A L PP PA PG FDF ++++ + AIG ++I +
Sbjct: 146 VGDRIRVRAMLMPPPQPAMPGAFDFARFAWFRQLGAIGTALGPVEVIAAGAATGWRADLA 205
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILS 123
++ I+ + I A + A + I + +A+IL+I L
Sbjct: 206 TNVNEIRHAITARILAVLPGDRGAVTAALTTGDQMPISAPMMQAYRDSGLAHILSISGLH 265
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
+ + AGL+ + L L P + +A + + +P +
Sbjct: 266 -ITMAAGLVFVGLRTLLALFPPVALRYPIKKWAAALAIVFAGFYTLLAGSPVPAQRSFFM 324
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEK 228
LL V + ++ + + + PD LI
Sbjct: 325 TGLVLLAVLLDRRA--LSMRLVAWAAVAILLW----QPDELIGPS 363
>gi|42520961|ref|NP_966876.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42410702|gb|AAS14810.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 720
Score = 192 bits (488), Expect = 7e-47, Method: Composition-based stats.
Identities = 70/367 (19%), Positives = 144/367 (39%), Gaps = 52/367 (14%)
Query: 26 PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR 85
P PG F +FS+ +++ ++ + K + ++ +
Sbjct: 402 PEAILKPG-FQMSFSAVLALVASY-----------QINANKLFKIKIMKYFVSIMISSVI 449
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
A++ + + I +F+ + G+I N++AIPI++ ++IP G+I +LL+ L ++ I
Sbjct: 450 ASL------ATVPYTIYNFNYFSISGIITNLVAIPIVTLIIIPLGIIYVLLIPLGVEWII 503
Query: 146 FGVMAWGLDIIIHIAHRISVA-HNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIM 204
+ +D I++I + I+ + I P +S + I L + + N R G
Sbjct: 504 APFIERPIDSILYITNAIASLQYLVIPIRTFPASSIIIITFGLLWLCLWERNWRFFGIFF 563
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFH 264
I + I F+ +PD+LI+ N+ A N L S +F+ W
Sbjct: 564 IVLGI---FSSAMYRTPDILINAD-NVAAKESDNLLYSLTRKNRNFVVKTW--------- 610
Query: 265 EAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLS 324
++ Q+ + + K L C+ ++ +V + +K+ I +
Sbjct: 611 ---------AKQNGQNQILNHKKYNNSDKRLKCNDYGCIYNKGNNKLVLLAYKKEDISEN 661
Query: 325 CQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIEN 384
C D+ I + + + CNV +I L+ G+ + + +K
Sbjct: 662 CDKVDLTI-QLSEFDYSACNVK-IIKHADLETYGTHSVWLTSR---------YVKINTVR 710
Query: 385 LHFPWTK 391
+ PW
Sbjct: 711 SNRPWHM 717
>gi|148255851|ref|YP_001240436.1| putative ComEC/Rec2 family protein [Bradyrhizobium sp. BTAi1]
gi|146408024|gb|ABQ36530.1| putative ComEC/Rec2 family protein [Bradyrhizobium sp. BTAi1]
Length = 762
Score = 192 bits (487), Expect = 9e-47, Method: Composition-based stats.
Identities = 73/393 (18%), Positives = 152/393 (38%), Gaps = 52/393 (13%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ F I ++ P P F +F++ G+ A+ F +P++ + +
Sbjct: 379 VDRRAVTFRTLAVAAMIVLIAAPEALVHP-SFQMSFAATL-GLVALVQF-GLPRLFATPD 435
Query: 64 SHNT-----WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILA 118
S T W ++++ + + + + + HFH I YG++AN+ A
Sbjct: 436 SSVTERIALWGGRELAMLLLA---------SLIAGLATTPYAAFHFHRITPYGVLANLAA 486
Query: 119 IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPE 177
+P++S +V+PAGL+ +L LD + + +M WG+D +I + ++ +
Sbjct: 487 MPVVSALVMPAGLLGLLAAPFGLDGLCWTLMGWGIDWMIAVTRWVAALPGAVGRVTAFGI 546
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
+ LL+ +T +R G+++I I I + P PD+LIS G VA+ +
Sbjct: 547 GPLILASFGLLLIGLLRTPLRWSGAVLIAIATIWSVSTPQ---PDILISGDGRAVAVRGR 603
Query: 238 NTLIS-NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLC 296
+ + + F+ +W +A P + +
Sbjct: 604 DGRLHVMRTGKDVFVVKEWLAADADP---------------------RVPSDPTLGDGVS 642
Query: 297 IKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQK 356
+S CV V + R + + C + +++T+ + + I + LQ+
Sbjct: 643 CDESGCVMAMADGRFVALTLRPEALADDCTRAALIVTSRAAPASC---AAAAIDRQRLQQ 699
Query: 357 QGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
QG+L + + + PW
Sbjct: 700 QGALML------ATQGVGFAVKPARAVGTSRPW 726
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 42/110 (38%), Gaps = 3/110 (2%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ K P + ++ ARL PP P PG +DF +++GI A G+ +
Sbjct: 181 LAVRKGTAP-DVGSFVQLKARLLPPLAPVRPGSYDFARDMFFQGIGASGFVMGGITTLTP 239
Query: 62 SE--SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV 109
+ + ++ + IRA + A A+ L I
Sbjct: 240 PQEGGFGLRYGAAMQGLRDAIDARIRARLDGDERAIATALLTGRRDAITP 289
>gi|312115926|ref|YP_004013522.1| ComEC/Rec2-related protein [Rhodomicrobium vannielii ATCC 17100]
gi|311221055|gb|ADP72423.1| ComEC/Rec2-related protein [Rhodomicrobium vannielii ATCC 17100]
Length = 729
Score = 191 bits (486), Expect = 1e-46, Method: Composition-based stats.
Identities = 69/362 (19%), Positives = 135/362 (37%), Gaps = 41/362 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ I+ F S W+ + L + T G
Sbjct: 389 SFQMSFAATAALIAGYERFGRYLHFEARSIRER-LAWQPV-----YLLGGVLVTTATAG- 441
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ F HFH + Y + N++ P + F+ +PA ++A++ M L++ P VM G+
Sbjct: 442 LAVEPFSAYHFHTLTTYAALGNLVGGPPVDFIAMPAMIVALIAMPFGLEDAPLAVMGVGV 501
Query: 154 DIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
D ++ +AH + + P + + IV L +V + + R +G +IG+ + +
Sbjct: 502 DAMMAVAHWVGGLPGSTVPVAAFPFAALLLIVSGGLWLVIWRRSWRVLGLGLIGVGVAMT 561
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLI-SNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
PD+L+ LVAL D+ + + + S+ QW A
Sbjct: 562 SIHA---RPDILVDRDAKLVALRDREGRLQAPKTRRASYALQQWLRADGDTRKPKEAATG 618
Query: 272 EDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL 331
Q ++ CV + +V ++ R D I C+ + IL
Sbjct: 619 AGWQ---------------------CDRTSCVSMVK-GRLVSLIARPDAIEEDCRRAAIL 656
Query: 332 ITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
+ + D+ L++ L ++G+ I++ D + ++ PW+
Sbjct: 657 VMPM-DLARPCPAPKLVLDRGALWERGATAISL------GDGALAVTTASEGRGDRPWSP 709
Query: 392 HR 393
R
Sbjct: 710 TR 711
Score = 67.1 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/266 (15%), Positives = 98/266 (36%), Gaps = 11/266 (4%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE-S 64
+ I A L PP P PG +DF +SYY+ + GY + P+ I
Sbjct: 166 RGDVDLRPGEAIRFRAILGPPPEPVMPGGYDFARASYYQAVGGSGYSLTKPERIEGRALP 225
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANIL 117
+ ++ ++ I+A + A+ + + + +A+I+
Sbjct: 226 WDMVPRTWLADLRGRIGERIKAALPGQTGEIAAALTVGQTAGLDEKSMDDLRASGLAHII 285
Query: 118 AIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHI-AHRISVAHNEFCIGRI 175
+I + ++ G+ + +L+L +I GL + + + +A + +G +
Sbjct: 286 SISGMHMSLVAGGMFWFVRWVLALFPSIALRYSTRGLAAMAALFVVTVYLALSGAAVGAV 345
Query: 176 PETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
+ +V +L+ ++R++ + I +++L S + + L+A
Sbjct: 346 RAYLMIAVVFLAILLNRPALSLRNVALAGLVI-LVVLPDSLIDISFQMSFAATAALIAGY 404
Query: 236 DKNTLISNYSNPPSFIFSQWKSALIT 261
++ ++ W+ +
Sbjct: 405 ERFGRYLHFEARSIRERLAWQPVYLL 430
>gi|110633996|ref|YP_674204.1| ComEC/Rec2-related protein [Mesorhizobium sp. BNC1]
gi|110284980|gb|ABG63039.1| ComEC/Rec2-related protein [Chelativorans sp. BNC1]
Length = 788
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 78/362 (21%), Positives = 135/362 (37%), Gaps = 25/362 (6%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ ++ + + + + + I F + A
Sbjct: 427 SFQMSFAATAALVAGYAVWSEWRRHRRTGHKGDYPLAYRAGRIAIGFTIGM-AATSLIAG 485
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
++++F + HF + L AN+ A P +S + +PA ++AIL M LD I F M +
Sbjct: 486 TASALFGVWHFQRVTPLALPANLAAAPFVSIIAMPAAVVAILAMPFGLDGIFFKAMGEAI 545
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
+I IA S +G IP ++F + +++V T +R I + + +L
Sbjct: 546 TAVIVIAKWFSDRSPVDAVGMIPLSAFFALTAALVILVVSTTRLRLIAVPLCVLGFALLV 605
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
T PD+LISE LV + ++ L N P +F W AL T P
Sbjct: 606 T---RQLPDVLISEDARLVGVRGEHGILAVNRPRPNAFTTDDWMRALDTGTTLKP----- 657
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSD-IL 331
+ F C C+ H S +V + + C + I+
Sbjct: 658 ----------VSAADWVSGLAFSC-ADGLCMARHVSGALVAHAETESAAETVCLSASLIV 706
Query: 332 ITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
I N + ++++T L + GS I + ++ I AI PW
Sbjct: 707 IDDAAAQNPCGPSEAVVLTKRDLARSGSASIHF---DREGMALRPEITFAIGEPWRPWHA 763
Query: 392 HR 393
HR
Sbjct: 764 HR 765
Score = 75.2 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 5 TKKYDP-FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
++ P +EG+ARL PPSGP PG +DF+F SY+ G A+G+F + P+ I +
Sbjct: 201 AREAPPELQPGDIVEGLARLMPPSGPVRPGSYDFSFVSYFTGTGALGFFMTGPERIEADR 260
Query: 64 SHNTWT--WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIA 114
+T I ++ + IR ++G + + IP +A
Sbjct: 261 QVSTLAKIAHSIEGVRLALAERIRTHVGGAEGEVIVALITGYRPGIPEEVNEWLRRSGLA 320
Query: 115 NILAIPILSFVVIPAGLIAIL 135
+IL+I L ++ A ++ IL
Sbjct: 321 HILSISGLHMALVAATVMFIL 341
>gi|304391661|ref|ZP_07373603.1| DNA uptake protein [Ahrensia sp. R2A130]
gi|303295890|gb|EFL90248.1| DNA uptake protein [Ahrensia sp. R2A130]
Length = 761
Score = 191 bits (484), Expect = 2e-46, Method: Composition-based stats.
Identities = 72/362 (19%), Positives = 141/362 (38%), Gaps = 35/362 (9%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEI--RANIGTYGSASA 96
F + ++A+ Y ++ I+ + ++ A +
Sbjct: 423 FQMSFAAVAALVAVYEGLNRRNAARPKTFRKGGLIAGTGRVLRRDVGGLALTSLVAGLAT 482
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
IF HF + GL+AN+ A+P++SF V+P L+++L + L + P MAW + +
Sbjct: 483 GIFAAYHFQRVAPLGLLANLAAMPVVSFAVMPLALLSMLALPFGLQDWPLAAMAWSTEWV 542
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+ +A+ +S + GRIP +SF+ L+M ++ ++ G + +++
Sbjct: 543 VAVANSVSDMGPQGITGRIPVSSFICATAGLLIMTLARSKLKLFGLAFLLPAVLLA---Q 599
Query: 217 YSFSPDLLISEKGNLVALVDKNTL-ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQ 275
+ P +LISE G +A++ ++T FI W++A P Q +
Sbjct: 600 TTKMPAILISEDGRQIAILSESTEPSLLRERGSRFITEIWQTAY-------PPNQADGTP 652
Query: 276 EKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTI 335
+F C + + + + LK + CQ++DIL+
Sbjct: 653 -------------HSSLRFQCDADACSATV--NGLQIVSLKTSASLWTDCQIADILVAPF 697
Query: 336 RDINTKLC----NVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
R + L+ L+ GS+ I + D ++ A+ PW +
Sbjct: 698 RLPDACNHVPVAERPLVFDETSLRSGGSVAIHL---GADGSLSDATVERAVIGSPRPWNR 754
Query: 392 HR 393
HR
Sbjct: 755 HR 756
Score = 78.7 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 12/137 (8%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
P + +EG+ARLS PSGPA+PG +DF FS+++ G+S G+F P E+ ++
Sbjct: 211 PVGSRLEGLARLSAPSGPAYPGGYDFAFSAWFDGLSGSGFFLGAPTATRPVEAVSS---- 266
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPILSF 124
I +++ + IR ++ G A+ ++ I +A+ILAI L
Sbjct: 267 -IQAVRDGLASLIRQSVPGEGGGIAAALIVGDRSGISAPTTEALRRSGLAHILAISGLHM 325
Query: 125 VVIPAGLIAILLMILSL 141
++ + L + +L
Sbjct: 326 ALVSLTAMGGLRAVFAL 342
>gi|288958448|ref|YP_003448789.1| ComEC/Rec2-related protein [Azospirillum sp. B510]
gi|288910756|dbj|BAI72245.1| ComEC/Rec2-related protein [Azospirillum sp. B510]
Length = 717
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 66/361 (18%), Positives = 129/361 (35%), Gaps = 37/361 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ I+A + P++ W + + + L + A + T
Sbjct: 393 SFQMSFAAVVALIAA--FERGSPRLAEWRRDA-GWVVRGLFYVGGILLTSVVATLATL-- 447
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
F + HF I YG+++N++AIPI SF V+P LIA L+ + M WG
Sbjct: 448 ----PFSLFHFQQIAFYGVLSNLIAIPITSFWVMPWSLIAYALLPFGWEEPALIAMNWGD 503
Query: 154 DIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+I A + + +P F +V+ + + R +G + I +
Sbjct: 504 RAVIWTAEFFGRLPWASLTVPAMPAGGFTALVLGGIWLCVWTRRWRWLGMLPILAGLAAP 563
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ PD+L++ G ++A+ + +S + W+ P
Sbjct: 564 ML---AERPDVLVAGDGTVMAVRMPDGRLSASVKGGGRVTETWRERDGERTAADPWPAAG 620
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
+ + L C+ R + + + D + C +D ++
Sbjct: 621 EW--------------SDGERSLGCDGLGCLYRVR-GRSMALSRLPDALDEDCGAADAVV 665
Query: 333 TTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTKH 392
TT + C L+I L+ +G+ +T+ + V+ + PWT
Sbjct: 666 TT---AVARGCRADLVIDRWALRHEGAHALTVTADGIKVETVRGV------RGDRPWTGG 716
Query: 393 R 393
R
Sbjct: 717 R 717
Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 72/200 (36%), Gaps = 19/200 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ ++ +Y P + + A L PP PA PG FDF +++ G+ A G+ P+ I +
Sbjct: 165 IRLSDRYPAPPPGSVVRVRATLLPPQAPAEPGAFDFQRRAWFMGLGATGFATGGPEQIEA 224
Query: 62 SE-------------SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP 108
+ + ++I + + + F
Sbjct: 225 PPVTGWSTIAIAFERARGAIAERVATAIGDPVEASVTTALLNGEEFGIPDGTMDDFRNSG 284
Query: 109 VYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
+A++L+I L + L ++ +L+L +P+ + W + I + +S
Sbjct: 285 ----LAHLLSISGLHVGIAAGILFYVVRALLAL--VPYIALRWPIKKIAALFGILSALAY 338
Query: 169 EFCIGRIPETSFVTIVVEFL 188
+G T ++ +
Sbjct: 339 TLLVGAPLPTVRSVLMTGMV 358
>gi|300023413|ref|YP_003756024.1| ComEC/Rec2-related protein [Hyphomicrobium denitrificans ATCC
51888]
gi|299525234|gb|ADJ23703.1| ComEC/Rec2-related protein [Hyphomicrobium denitrificans ATCC
51888]
Length = 779
Score = 190 bits (483), Expect = 3e-46, Method: Composition-based stats.
Identities = 67/357 (18%), Positives = 137/357 (38%), Gaps = 34/357 (9%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F + ++A+ + + + S + + + + + A++ +
Sbjct: 383 DAGFQMSFAAVTALVAAHELLTRFLGTNSRPHPVARVVKFFGEIIASTLIASV------A 436
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
+ F +FH Y ++AN++AIPI + +V+PA L A++LM L+ I MAWG++
Sbjct: 437 VAPFAAYNFHQSQQYAVLANMIAIPICNIIVMPAALGAMILMPFGLEWIALKPMAWGIEG 496
Query: 156 IIHIAHRISVAHNEFC-IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
+ A+ + + IP +F +++ L + +T IR +G+ G+ ++ L
Sbjct: 497 MAWCANMVGALPGAVGHLPEIPTIAFALMLIGGLWLTLWRTRIRLVGA---GLALLGLVA 553
Query: 215 FPYSFSPDLLISEKGNLVALVDKNTLISNYS-NPPSFIFSQWKSALITPFHEAPHVQKED 273
P+ PD+L+++KG LVA+ D + +S+ + + +W
Sbjct: 554 TPWMPRPDVLVAQKGMLVAVRDASGKLSSLPAHGAKYDLERWLEY--------------- 598
Query: 274 LQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILIT 333
+ + F C C+ H V V + + C +DILI
Sbjct: 599 -----DGDGRSARDAQAGGAFSC-DAVGCIA-HVKGATVAVARHPAAVADDCLNADILIL 651
Query: 334 TIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
+I + G+ + + + + A PW+
Sbjct: 652 D-DPKPADCAVPGTVIDVFDRWRNGAYALYLARDEASPEPRVRLETVAAHRGERPWS 707
Score = 69.4 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 73/191 (38%), Gaps = 17/191 (8%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT--W 70
+ A LSPP+ PA PG FD+ ++++ + A+GY ++ P + ++
Sbjct: 168 PGDRVRLKANLSPPAKPALPGGFDYARTAWFDQVGAVGYAFAPPAIEAHADGGTLTAQYR 227
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV--------YGLIANILAIPIL 122
+ I +++Q IRA + A + I GL +IL+I L
Sbjct: 228 RGIETLRQLIATRIRAVLPGETGEIALALITGERGGISAETNNAFKNSGLF-HILSISGL 286
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
V++ L + ++L+ + + L + I I +F T
Sbjct: 287 HMVIMAGALFYSVRLLLA------AIPFFALRLPIKKIAAAIGILGALGYLAISGGAFAT 340
Query: 183 IVVEFLLMVFC 193
+ ++++
Sbjct: 341 VRSALMILIIF 351
>gi|254469565|ref|ZP_05082970.1| competence protein [Pseudovibrio sp. JE062]
gi|211961400|gb|EEA96595.1| competence protein [Pseudovibrio sp. JE062]
Length = 859
Score = 190 bits (482), Expect = 4e-46, Method: Composition-based stats.
Identities = 65/369 (17%), Positives = 154/369 (41%), Gaps = 26/369 (7%)
Query: 30 AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEI----- 84
F +F + +SA + + + + K + + ++
Sbjct: 468 VLSPGFQMSFIAVLALLSAYSF-----GKDWLRDDREAYVLKGKTGVLRTLKKPAKWLFA 522
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
A A+ + HF I YG++ N+LA+P+++FVV+P GL+A+L + L D
Sbjct: 523 CAMTSLIAGAATAPIAAMHFEQIAPYGVVGNVLAMPLVTFVVMPLGLLALLTIPLGADAF 582
Query: 145 PFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
M GL +++ A+ +S +G + ++ +++ +++ ++ +
Sbjct: 583 FLQGMEVGLSLVLKAAYWVSALSDGLTNLGVASVSGYLLVILASIILCIMPLRLKWLSVP 642
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPF 263
+ +I PD++I++ G + ++ S+ SF S L
Sbjct: 643 VFAAGLIGFVV---ERPPDVMIADAGKHIGFYGEDGSFRLTSSRISFAAD---SLLRAGG 696
Query: 264 HEAPHVQKEDLQEKNQSSLKE-ILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
+ A ++ + ++S +E + ++ P + + G + V++ K + +++
Sbjct: 697 YSANSFKEHKTRAADRSCDEEGCVLALYPHRAI-----GGGGEQKPSVVLAQSKVEGVLK 751
Query: 323 LSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAI 382
CQL+ I++T + ++ CN L++ + ++GS+ I + + K+K ++ A
Sbjct: 752 ADCQLASIIVTQAQAPSS--CNAELVLDQKTFGERGSVYIWLSDQAESGHKIK-KVRWAY 808
Query: 383 ENLHFPWTK 391
+ PW
Sbjct: 809 DAQRRPWNP 817
Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/202 (17%), Positives = 74/202 (36%), Gaps = 18/202 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ + ++ ARL PP G PG +DF ++++ GI A+GY S P M+
Sbjct: 247 LSLKGMKEAPVMGDKMQLKARLLPPGGAVRPGGYDFARTAFFDGIGAVGYALSRPVMLAR 306
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI---------FLIKHFHCIPVYGL 112
+ + +I+ IR + ++ ++ + GL
Sbjct: 307 DGGTGFL--QHVDTIRSGIAGRIRRVLDYSPESAFAVALLVGKRDYLASADKDALRNAGL 364
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMA-----WGLDIIIHIAHRISVAH 167
A++LAI + ++ + + ++LSL + + +I + ++
Sbjct: 365 -AHVLAISGMHMGLVTSLVFLAARLVLSLSQ-SLALKGHIHVYASIAALIAATVYLGLSG 422
Query: 168 NEFCIGRIPETSFVTIVVEFLL 189
R + + + L
Sbjct: 423 ASVATQRAYLMAVLILCAGLLG 444
>gi|299134984|ref|ZP_07028175.1| ComEC/Rec2-related protein [Afipia sp. 1NLS2]
gi|298589961|gb|EFI50165.1| ComEC/Rec2-related protein [Afipia sp. 1NLS2]
Length = 757
Score = 187 bits (474), Expect = 3e-45, Method: Composition-based stats.
Identities = 64/386 (16%), Positives = 150/386 (38%), Gaps = 42/386 (10%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ F + L P P F +F++ + + +P+ +S+
Sbjct: 375 RRAITFRTLALAAMLVLLIAPEALVHP-SFQMSFAATLGLV--VLAQIGMPQWFAASDDS 431
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
N + + L A + + + HFH I YG+IAN++A+P++S +
Sbjct: 432 NLGRFAAWGGRELVVL----ALASFVAGLATTPYAAFHFHRIAPYGVIANLVAMPVVSVL 487
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSFVTIV 184
V+PAGL+ I+ + D++ + +M G+D +I ++ ++ F + + +
Sbjct: 488 VMPAGLLGIVAIPFGFDSLFWHLMGVGIDWMIFVSQWVAALPGAFGRVHAFSIGPLIVMS 547
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI-SN 243
+++ ++ +R G +IG ++ PD+LI+ + VA+ K++ +
Sbjct: 548 GGIVVLGLLRSPLRWAGVGLIGCGVVWAAVV---TEPDILIARDASSVAVRGKDSRLRIM 604
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
++ F++ +W +A P + + + ++ CV
Sbjct: 605 HTAKNVFVWREWLAADADP---------------------RAVTDPSIAQGVSCDEAGCV 643
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEIT 363
+ ++ + ++ + + C + ILIT + + + + L+ G + +
Sbjct: 644 VEGKEGDLIALTRQPEALVDDCAQAKILITPYQTPADC---AARVFYRDDLRGLGGVAL- 699
Query: 364 IIPPSNDNDKVKFIIKSAIENLHFPW 389
+ I S E + PW
Sbjct: 700 -----KRTAQGYSITMSEPEGVDRPW 720
Score = 42.9 bits (99), Expect = 0.084, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 10/150 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ K P + + ARL PP P PG +DF Y++ I A G+ + +
Sbjct: 175 LSVRKGTAP-AVGSYVTLKARLLPPLRPLRPGGYDFARDMYFQCIGASGFVLGTIRTQDT 233
Query: 62 SE--SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGL 112
+ + ++ + IR + A A+ L I
Sbjct: 234 PKQGDWRLRYAALMQGLRDAVDARIRTVLSGDQRAIATALLTGRRDAISTTNNDALFVSG 293
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLD 142
+ ++L+I V+ + + +L+L
Sbjct: 294 LGHVLSISGYHMAVVAGVVFFAIRALLALS 323
>gi|154253618|ref|YP_001414442.1| ComEC/Rec2-like protein [Parvibaculum lavamentivorans DS-1]
gi|154157568|gb|ABS64785.1| ComEC/Rec2-related protein [Parvibaculum lavamentivorans DS-1]
Length = 718
Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 67/359 (18%), Positives = 136/359 (37%), Gaps = 33/359 (9%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + + A+ FY M + + ++ S++ I A A+
Sbjct: 387 SFQMSFAAVIALIAFYESSWMRSWTSRPRATGLGALPALAGSYVLGI-ALTSIVAGAATG 445
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
HF+ I +YGL N+ A+P++ VV+P L+++LLM LD M G++ ++
Sbjct: 446 AIAAYHFNRIALYGLAGNMAAMPLVGIVVMPMALLSLLLMPFGLDGPALWAMGKGVEGML 505
Query: 158 HIAHRISVA-HNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+AH ++ + + P + + +V+ L + + R G + + + + +
Sbjct: 506 LVAHEVASWNGADRLVPEAPLGALLLVVLGSLWLALWREKWRFAGIVPMVAGLAL---WG 562
Query: 217 YSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQE 276
+ PD+LI L A+ N ++ S+ P++ QW D +
Sbjct: 563 AASRPDVLIDRDAALFAVRTANGSLALTSSRPAYAAEQWLR------------HDGDGRR 610
Query: 277 KNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIR 336
++S E L + C+ ++ D + C +DI+I I
Sbjct: 611 PREASKSEAL---------ACDRHGCIYKEEGRPVIAFAGTLDAVVEDCAKADIVIAKIS 661
Query: 337 DIN--TKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
+ C+ LL+ + G+ +T + + S + PW + R
Sbjct: 662 VPYRIRRECDARLLLDYFSFWRNGATALTFTESGGID-----VTTSLAARGNRPWVQRR 715
Score = 66.4 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/234 (17%), Positives = 84/234 (35%), Gaps = 17/234 (7%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S+ + + ARL PP P PG FD+ +++ G+ A+G+ Y++P+ +
Sbjct: 164 ISVRLRGAVLRPGAVVTLRARLMPPPEPVQPGGFDYARQAWFDGMGAVGFAYTLPEELSP 223
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIA 114
+ ++ ++ IR+ +G A A+ + IP I
Sbjct: 224 PSGRD---RAVLADLRMRIGERIRSVVGGTSGAVAAALINGERASIPDDVSEDLRAAGIF 280
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR 174
++L+I L V+ + ++ L+L P + + + A G
Sbjct: 281 HVLSISGLHMVLFAGSVFWVVRAALAL--WPSMALRYPIKKWAAAAALFGATFYLLISGA 338
Query: 175 IPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEK 228
T I++ + + ++ ++IL PD LI
Sbjct: 339 AIATQRAWIMISLMFLAILLDRPALTMRNVMLAALVILLW-----RPDSLIGAS 387
>gi|90423953|ref|YP_532323.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris BisB18]
gi|90105967|gb|ABD88004.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris BisB18]
Length = 774
Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats.
Identities = 64/360 (17%), Positives = 145/360 (40%), Gaps = 41/360 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ G+ A+ +PK++ S ++ + +++ + +
Sbjct: 407 SFQMSFAATL-GLVALVQI-GMPKLLASPDN----SATARAALWGAREIMVLGLASLVAG 460
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + + HFH + YG++AN+LA+P++S +V+PAGL+ + M D + + +M G+
Sbjct: 461 LATTPYAAFHFHRVTPYGVLANLLAMPVVSALVMPAGLLGLAAMPFGFDGVFWRLMDIGI 520
Query: 154 DIIIHIAHRISVAHNEFC-IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
D +I +A ++ + + + +L+ +T +R G+ ++G+ I
Sbjct: 521 DWMIVVAEGVAALPGAVGRVAAFGSGPLLASTLGLILLGLLRTPLRLSGAAVLGLAIGWA 580
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLI-SNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
P PD+L++ G VA+ + + +F+ +W +A
Sbjct: 581 LLTPQ---PDILVAADGRHVAVRGADGRLRVMQDGKDAFLLKEWLAA------------D 625
Query: 272 EDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL 331
D + SSL E + + CV +V + +R + + C+ ++
Sbjct: 626 ADGRAVTDSSLAE---------GVSCDAAGCVAPLPDGGLVALARRPEAVAEDCERVRLI 676
Query: 332 ITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
+T + + +I + L++QG+ + I + PW+
Sbjct: 677 VTLRQPPADC---AAPVIDQDSLRRQGAQILW------QTGGRFAAIAVRPRGVDRPWSP 727
Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 3/110 (2%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSI--PKMI 59
LS+ K P + +E ARL+PP P PG +DF Y++ I+A G+ P+
Sbjct: 180 LSVKKGTAP-QVGSFVELKARLTPPLQPLRPGAYDFGRDLYFQNIAATGFVMGAIKPRPP 238
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV 109
+ ++ + IR + A A+ L I V
Sbjct: 239 PGEIGFALRYAATMQGLRDAIDARIRLTLSGDNRAIATALLTGRRDAISV 288
>gi|146341051|ref|YP_001206099.1| putative ComEC/Rec2 family protein [Bradyrhizobium sp. ORS278]
gi|146193857|emb|CAL77874.1| putative ComEC/Rec2 family protein [Bradyrhizobium sp. ORS278]
Length = 767
Score = 186 bits (471), Expect = 6e-45, Method: Composition-based stats.
Identities = 80/393 (20%), Positives = 155/393 (39%), Gaps = 52/393 (13%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ F I ++ P P F +F++ G+ A+ F +PK+ + +
Sbjct: 383 VDRRAVTFRTLAVAAMIVLIAAPEALVHP-SFQMSFAATL-GLVALVQF-GLPKLFATPD 439
Query: 64 SHN-----TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILA 118
S W +++S + + + + + HFH I YGL+AN+ A
Sbjct: 440 SSTAQRVALWGGRELSMLLLA---------SLIAGLATTPYAAFHFHRITPYGLLANLAA 490
Query: 119 IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPE 177
+P++S VV+PAGL+ +L LD + + VM WG+D +I + ++ I
Sbjct: 491 MPVVSAVVMPAGLLGLLFAPFGLDGLWWTVMGWGIDWMIAVTRWVAALPGAVGRITAFGI 550
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
+ +L+ +T +R G+ ++ I P PD+L+S G VA+ +
Sbjct: 551 GPLIVSSFGLVLIGLLRTPLRWSGAAVLAIAAAWAAATPQ---PDILVSGDGRAVAVRGR 607
Query: 238 NTLIS-NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLC 296
+ L+ + F+ +W +A D + SSL +
Sbjct: 608 DGLLHVMRNGKDVFVTREWLAA------------DADARLPADSSLGH---------GVS 646
Query: 297 IKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQK 356
S CV +V + R D + C + +++T ++ + ++ LQ+
Sbjct: 647 CDDSGCVLALADGRLVALTLRADALADDCARAALVVTARAAPSSC---AAAVVDRPRLQQ 703
Query: 357 QGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
QG+L + DK ++ + PW
Sbjct: 704 QGALML------VARDKGFAVVPVRADGTDRPW 730
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 3/110 (2%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ K P + ++ ARL PP P PG +DF +++GI A G+ ++
Sbjct: 185 LAVRKGAAP-DVGSFVQLKARLLPPLAPVRPGSYDFARDMFFQGIGASGFVMGAITVVTP 243
Query: 62 SESHNTWTWKKISS--IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV 109
++ + ++ IRA + A A+ L +
Sbjct: 244 PQAAGVGLRYAAAMQDLRDVIDARIRARLAGDERAIATALLTGRRDAVTP 293
>gi|27379941|ref|NP_771470.1| hypothetical protein bll4830 [Bradyrhizobium japonicum USDA 110]
gi|27353094|dbj|BAC50095.1| bll4830 [Bradyrhizobium japonicum USDA 110]
Length = 776
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 64/365 (17%), Positives = 145/365 (39%), Gaps = 51/365 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT-----WTWKKISSIKQSFLNEIRANI 88
F +F++ ++ + +P + S + T W ++I+ + FL + A +
Sbjct: 421 SFQMSFAATLGLVALV--QIGMPNLFASPDHSATARIAMWGGREIAML---FLASLIAGL 475
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
+ + + HFH + +G++AN+ A+P++S +V+PAGL+ +L LD + + +
Sbjct: 476 ------ATTPYAAFHFHRVTPFGVLANLGAMPVVSALVMPAGLLGLLAAPFGLDGVFWWL 529
Query: 149 MAWGLDIIIHIAHRISVAHNEFC-IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
M G+D ++ ++ ++ I + + ++M +T +R G++++ +
Sbjct: 530 MGIGIDWMVAVSRWVAALPGAVGRIPAFGIAPLIAASLGIIVMGLLRTPLRWSGALVLLV 589
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN-YSNPPSFIFSQWKSALITPFHEA 266
I+ PD+LI+ G VA+ ++ + +N F+ +W +A P
Sbjct: 590 AILWGLA---DRQPDILIAGDGQSVAVRGRDGHLQMIRANKDGFLLKEWLAADADPRDAG 646
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
S + ++ CV +V + R D + C
Sbjct: 647 ---------------------SPSLAAGVSCDEAGCVTPLADGRLVALALRIDALADDCS 685
Query: 327 LSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLH 386
+ +++T V++++ + L QG+L +T +
Sbjct: 686 RAALVVTARPAPADC---VAMVVDRQRLAAQGALALT------RRGDGFAVQAVKARGTD 736
Query: 387 FPWTK 391
PW+
Sbjct: 737 RPWSP 741
Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 3/110 (2%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ K P + ++ ARL PP P PG +DF+ +++GI A G+
Sbjct: 194 LSVRKGTAP-EVGSFVQLKARLMPPISPVRPGSYDFSRDMFFQGIGASGFVMGAIAAAVP 252
Query: 62 SESHNTWTWKK--ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV 109
++ + ++ + +RA + A A+ L I
Sbjct: 253 PDAGGLRLRYAAFMQGLRDAIDARVRATLEGDNRAIATALLTGRRDAITT 302
>gi|90419607|ref|ZP_01227517.1| putative ComEC/Rec2-related protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336544|gb|EAS50285.1| putative ComEC/Rec2-related protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 791
Score = 183 bits (464), Expect = 4e-44, Method: Composition-based stats.
Identities = 70/366 (19%), Positives = 138/366 (37%), Gaps = 30/366 (8%)
Query: 30 AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIG 89
F +F++ I Y++ + T + ++ L+ I
Sbjct: 412 VMTASFQMSFAATVALIGG----YAVLSQWRARRKRGRETDRGVAGKIIVALSAIMV-TS 466
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM 149
++ + + HFH + +G +AN+L +P+ + ++P L+ LL+ LD P+ M
Sbjct: 467 ILAGSATAPYAAYHFHRLATFGFVANLLTMPLFTLWIMPLALVGTLLIPFGLDAWPYQAM 526
Query: 150 AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITI 209
GL +++ IA + + IGR+ + + + L + +R +
Sbjct: 527 GAGLWLVLEIARNVYAWLPDQAIGRMTASGLLLLTAAILTASCLASRLRW--LGLPLALA 584
Query: 210 IILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEAPH 268
++ + P+LL+ E G VA + + L P SFI QW+ A EA
Sbjct: 585 GLVAAPDRTAPPELLVFEDGKEVATLAADGQLAFLRPRPSSFIAEQWERAF-----EARA 639
Query: 269 VQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLS 328
+ D + + E +C R + V + +C +
Sbjct: 640 PRGADTERIRATISAE------------CAAKYCRFTTRGGLRVIWTEDYARTGDACDEA 687
Query: 329 DILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFP 388
D+ I + + + ++L+T L++ GSL I S + + I A+ +
Sbjct: 688 DVAIVSRAIRLAECRSGAVLVTLRTLRRTGSLAI-----SREAATGRPRIVKAVRDPPER 742
Query: 389 WTKHRI 394
W HR+
Sbjct: 743 WNVHRL 748
Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ + +++P G+ RL PPSGPAFPG +DF + ++ GI A GY P+
Sbjct: 183 IVVGSRHEPIAPGGLYRGLVRLGPPSGPAFPGSYDFAMAPFFAGIGAYGYSLGAPEAEPM 242
Query: 62 SESHNTWTWKKISSIK 77
++ ++
Sbjct: 243 PAPTTGEGGGLLADLR 258
>gi|225630830|ref|YP_002727621.1| ComEC/Rec2 family protein [Wolbachia sp. wRi]
gi|225592811|gb|ACN95830.1| ComEC/Rec2 family protein [Wolbachia sp. wRi]
Length = 717
Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats.
Identities = 73/391 (18%), Positives = 152/391 (38%), Gaps = 55/391 (14%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I +KY A + + P PG F +FS+ +++
Sbjct: 378 IMIERKYRGLIAIAFAAAVILIIEPEAILKPG-FQMSFSAVLALVASY-----------Q 425
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ + K + ++ + A++ + + I +F+ + G+I N++AIPI
Sbjct: 426 INANKLFKIKIMKYFVSIMISSVIASL------ATVPYTIYNFNYFSISGIITNLVAIPI 479
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVA-HNEFCIGRIPETSF 180
++ ++IP G+I +LL+ L ++ I + ++ I++I + I+ + I P +S
Sbjct: 480 VTLIIIPLGIIYVLLIPLGIEWIIAPFIERPINSILYITNAIASLQYLVIPIRTFPASSI 539
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ I L + + N R +G I + I + +PD+LI+ N+ A N L
Sbjct: 540 IIITFGLLWLCLWERNWRFLGFFFIVLGICFSAAY---KTPDILINAD-NVAAKESDNLL 595
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
S +F+ W ++ Q+ + + P K L K
Sbjct: 596 YSLTRKSRNFVIKTW------------------AKQNGQNQILNHTKYSNPDKRL---KY 634
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
C+ ++ V + +K+ I +C D+ I + + + CN +I L+ G+
Sbjct: 635 GCIYNKGNNKSVLLAYKKEDISENCDKVDLTI-QLSEFDYSACNTK-IIKHADLETYGTH 692
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
+ + +K + PW
Sbjct: 693 SVWLTNR---------YVKINTVRSNRPWHM 714
>gi|58697018|ref|ZP_00372488.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Drosophila
simulans]
gi|58536723|gb|EAL59993.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Drosophila
simulans]
Length = 724
Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats.
Identities = 73/391 (18%), Positives = 152/391 (38%), Gaps = 55/391 (14%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I +KY A + + P PG F +FS+ +++
Sbjct: 385 IMIERKYRGLIAIAFAAAVILIIEPEAILKPG-FQMSFSAVLALVASY-----------Q 432
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ + K + ++ + A++ + + I +F+ + G+I N++AIPI
Sbjct: 433 INANKLFKIKIMKYFVSIMISSVIASL------ATVPYTIYNFNYFSISGIITNLVAIPI 486
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVA-HNEFCIGRIPETSF 180
++ ++IP G+I +LL+ L ++ I + ++ I++I + I+ + I P +S
Sbjct: 487 VTLIIIPLGIIYVLLIPLGIEWIIAPFIERPINSILYITNAIASLQYLVIPIRTFPASSI 546
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ I L + + N R +G I + I + +PD+LI+ N+ A N L
Sbjct: 547 IIITFGLLWLCLWERNWRFLGFFFIVLGICFSAAY---KTPDILINAD-NVAAKESDNLL 602
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
S +F+ W ++ Q+ + + P K L K
Sbjct: 603 YSLTRKSRNFVIKTW------------------AKQNGQNQILNHTKYSNPDKRL---KY 641
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
C+ ++ V + +K+ I +C D+ I + + + CN +I L+ G+
Sbjct: 642 GCIYNKGNNKSVLLAYKKEDISENCDKVDLTI-QLSEFDYSACNTK-IIKHADLETYGTH 699
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
+ + +K + PW
Sbjct: 700 SVWLTNR---------YVKINTVRSNRPWHM 721
>gi|86138838|ref|ZP_01057410.1| competence protein [Roseobacter sp. MED193]
gi|85824485|gb|EAQ44688.1| competence protein [Roseobacter sp. MED193]
Length = 689
Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats.
Identities = 77/388 (19%), Positives = 150/388 (38%), Gaps = 54/388 (13%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++ A + L P PG F +F++ + G+F + ++ +
Sbjct: 355 RRALSLRAVAVAATLVLLRRPETLLSPG-FQMSFAATAALVGVFGWFRTRRSLLGPAW-- 411
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ S+ L+ A A+ + F HF+ + YGLIAN+LA+PI+ V
Sbjct: 412 -------LRSVLTVVLSSAVA------GAATAPFGAAHFNVVSHYGLIANVLAVPIMGLV 458
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE-TSFVTIV 184
V+PA ++A+ L L + I + GL+ I+ +A +S +P
Sbjct: 459 VVPAAVLAMCLAPLGGEQIGIFFLQSGLEWILAVAAWVSALPKPQSGVVMPGIWGLPLFT 518
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNY 244
+ L ++ + +R G ++IG++ + T+ P LLIS G LV ++ +
Sbjct: 519 LGALFVLLWQGRLRWAGFLLIGLSSL---TWAQVERPLLLISANGGLVGVLTPQGRALSR 575
Query: 245 SNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVG 304
+I ++W +A TP + + + V
Sbjct: 576 EKSQGYIAARWLAADGTPLPQITAAA----------------------LWHSQIDAGGVW 613
Query: 305 CHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITI 364
V+ KR + CQ +D++++ R C ++ PE L++ GS+ I
Sbjct: 614 VGGRRVVHITGKRHADVVTDCQPTDLIVSNRRLELGGDCE---VLGPERLRRSGSIRI-- 668
Query: 365 IPPSNDNDKVKFIIKSAIENLHFPWTKH 392
+ + + + I + PW++
Sbjct: 669 ------DHDGRMVTAADIAG-NRPWSRQ 689
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 44/245 (17%), Positives = 88/245 (35%), Gaps = 17/245 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ + + A L PP GP+ PG FDF +++ I A GY + P ++ +
Sbjct: 161 LSLAQDSAIPQVGVRLATTAHLMPPQGPSEPGGFDFRRYAWFLKIGANGYTRT-PLVVLA 219
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IA 114
H + + + Q + A+ + + L +A
Sbjct: 220 PPRHGLYLQRFRYRLSQIVQQRLEPAT----GGVAAAIIAGDRSGVRPQELQNLRASNLA 275
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH-IAHRISVAHNEFCIG 173
++LAI L ++ + +L SL IP + W + I A + + + G
Sbjct: 276 HLLAISGLHMGLLTGFVFTVLR--FSLCVIPAIALRWNIKKISAGAALVVGLFYLGISGG 333
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP--DLLISEKGNL 231
+ +V+ + V + ++ + T+++L SP + + L
Sbjct: 334 NVSTERAFIMVLVLFVAVLLDRRALSLRAVAVAATLVLLRRPETLLSPGFQMSFAATAAL 393
Query: 232 VALVD 236
V +
Sbjct: 394 VGVFG 398
>gi|192291622|ref|YP_001992227.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris TIE-1]
gi|192285371|gb|ACF01752.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris TIE-1]
Length = 755
Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats.
Identities = 66/388 (17%), Positives = 143/388 (36%), Gaps = 39/388 (10%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ F + L P P F +F++ ++ + +P + + +
Sbjct: 369 VDRRAITFRTLALAALVVLLIAPEALVHP-SFQMSFAATLGLVALV--QIGMPALFGADD 425
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S + + L A + + HFH I YG+++N+ A+P++S
Sbjct: 426 SSVAARVATWGGREIALL----ALASLVAGFATMPYAAYHFHRITPYGVLSNLAAMPVVS 481
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSFVT 182
+V+PAGL+ + M LD + +M G+D +I +A ++ + +
Sbjct: 482 AIVMPAGLLGLAAMPFGLDAPFWRIMELGIDWMILVAQWVAALPGAVGRVTAFGTGPLLV 541
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI- 241
+ +++ ++ +R G++ +G+ + P P++LI+ G VA+ + +
Sbjct: 542 ASLGIVMLGLLRSPLRWGGALGVGVAVAWAALTPQ---PEVLIAGDGRQVAVRGADGRLH 598
Query: 242 SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
S +F +W +A D + + +SL R +
Sbjct: 599 LMQSGADAFRLKEWLAA------------DADSRAPDAASL---------RAGVSCDPDG 637
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLE 361
CV +V + R D + C + ++IT + + +I + LQ G+L
Sbjct: 638 CVTPLADGRLVALSLRPDGLADDCARAVLIITAGQPPPDC---AARVIGRDELQANGALA 694
Query: 362 ITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ + + PW
Sbjct: 695 LRRSGSD---PGLFVADATRPRGPSRPW 719
Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 57/149 (38%), Gaps = 10/149 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ K P + + ARL PP P PG +DF Y++GI+A G+
Sbjct: 171 LSVKKGTAP-TVGSFVTLKARLQPPLQPLRPGSYDFARDLYFQGIAASGFVLGAMTTAEP 229
Query: 62 SE--SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGL 112
+ + ++ + IRA++G A A+ L I
Sbjct: 230 PQDGGWRLRYAAVMQGLRDAIDARIRASLGGDPRAIATALLTGKRDAISTPVNDAMFISG 289
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSL 141
+ ++L+I V+ + L +L+L
Sbjct: 290 LGHVLSISGYHMAVVAGVVFFALRALLAL 318
>gi|209885103|ref|YP_002288959.1| competence protein [Oligotropha carboxidovorans OM5]
gi|209873299|gb|ACI93095.1| competence protein [Oligotropha carboxidovorans OM5]
Length = 709
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 63/393 (16%), Positives = 143/393 (36%), Gaps = 53/393 (13%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ F + L P P F +F++ + + +
Sbjct: 328 VDRRAITFRTLALAAMLVLLIAPEALVHP-SFQMSFAATLALV------------MLAQN 374
Query: 64 SHNTWTWKKISSIKQSFLNE-----IRANIGTYGSASASIFLIKHFHCIPVYGLIANILA 118
W ++ + + A + + + HFH I YG+IAN++A
Sbjct: 375 GLPGWFTDNDGALGRFAAWGGRELFVLAAASFVAGLATTPYAAFHFHRIAPYGVIANLVA 434
Query: 119 IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPE 177
+P++S +V+PAGL+ I+ + LD++ + +M G+D +I ++ + F +
Sbjct: 435 MPVVSVLVMPAGLLGIVAIPFGLDSLFWQLMDVGIDWMIAVSQWVVALPGAFGRVHAFGV 494
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
S + I +++ +T +R G+ +IG I++ + PD+LI+ VA+ +
Sbjct: 495 GSLLVISAGIIVLGLLRTPLRWAGAALIGGGILLA---AQATPPDVLIARDAASVAVRGR 551
Query: 238 NTLISNYSNP-PSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLC 296
+ + +F+ +W +A + +
Sbjct: 552 DGQLRIMPTAKNAFVAREWLAADAD---------------------ARVTTDPSLTLGVS 590
Query: 297 IKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQK 356
+ CV + +V + + + C + I++T+ + + + L++
Sbjct: 591 CDATGCVVEGKGGDLVALAHWPEALTDDCARAKIIVTSHAVPADC---AARIFDRDSLRQ 647
Query: 357 QGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
G + + D +I + L PW
Sbjct: 648 LGGMAL------VRTDDGYRMIAGEPQGLDRPW 674
Score = 43.6 bits (101), Expect = 0.056, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 55/150 (36%), Gaps = 10/150 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ K P + ARL PP P PG +DF Y++G+ A G+ K+ +
Sbjct: 130 LSVRKGTAP-AVGQYVALKARLLPPLRPLRPGGYDFARDMYFQGLGASGFVLGAIKLTDA 188
Query: 62 SESH--NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGL 112
+ W + ++ IR + A A+ L I
Sbjct: 189 PQEGDLMLRYWTAVQGMRDGVDARIRTVLSGDERAIATALLTGRRDAISAPVNDALFVSG 248
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLD 142
+ ++L+I V+ + + +L+L
Sbjct: 249 LGHVLSISGYHMAVVAGVVFFAIRALLALS 278
>gi|86749927|ref|YP_486423.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris HaA2]
gi|86572955|gb|ABD07512.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris HaA2]
Length = 764
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 75/387 (19%), Positives = 145/387 (37%), Gaps = 36/387 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ F + L P P F +F++ ++ + +P + +++
Sbjct: 374 VDRRAITFRTLAIAALVVLLIAPEALVHP-SFQMSFAATLGLVALV--QIGMPALFATAD 430
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S T + + L A + + + HFH + YG+IAN+LA+P++S
Sbjct: 431 SSTTARAALWGGREIAML----ALASLVAGLATTPYAAYHFHRVTPYGVIANLLAMPVVS 486
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSFVT 182
VV+PAGL+ + M LD + + +M G+D +I +A ++ I +
Sbjct: 487 VVVMPAGLLGLAAMPFGLDGVFWRIMEIGIDWMIVVALWVAALPGAIGRIAAFGTGPLLL 546
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI- 241
+ +L+ +T +R+ G ++ P PD+LI+ G VAL + +
Sbjct: 547 ASLGIVLLGLLRTPLRYGGLALLAFATGWALLTPQ---PDILIAGDGRQVALRGPDGRLR 603
Query: 242 SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
S SF QW +A P + + R+ +
Sbjct: 604 LMQSGGDSFRVKQWLAADADP---------------------RAVDAASLREGVSCDADG 642
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLE 361
CV +V + R D I C + ++I + + LI+ E+L +L
Sbjct: 643 CVAALADGGLVALSFRADGIGDDCARAKLVIALAQPPPDC---AARLISTEMLAGSAALA 699
Query: 362 ITIIPPSNDNDKVKFIIKSAIENLHFP 388
+ P + + + A + P
Sbjct: 700 LRRHPAGDGEFVTEAVRPIARDRPWLP 726
>gi|163731992|ref|ZP_02139438.1| competence protein, putative [Roseobacter litoralis Och 149]
gi|161394290|gb|EDQ18613.1| competence protein, putative [Roseobacter litoralis Och 149]
Length = 690
Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 67/356 (18%), Positives = 122/356 (34%), Gaps = 47/356 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ ++ G+ MI S I
Sbjct: 373 GFQMSFAATTALVAVFGFMRDYKIMIGPKWVQPVVAVLLASGI---------------SG 417
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + HF+ I YGLIAN+L++P++ VV+PA ++A+ L L LD + +M GL
Sbjct: 418 LATAPVGAAHFNTISHYGLIANLLSVPVMGSVVVPAAVLALCLAPLGLDWLGLWIMGVGL 477
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVT-IVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
I+ + ++ P + I + FL +V + R IG + + I+
Sbjct: 478 RWILEVGAFVAALDGARSYVAGPGAVVLPMIALGFLWLVLWQGRARLIGVVPV---ILAF 534
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ + P LI+E G LV ++ +N + FI W +
Sbjct: 535 LLWQGTVRPMGLIAENGTLVGVMTENGRALSKPKGAGFIARNWLENDGDATGQV------ 588
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
D + S +L L KR C DIL+
Sbjct: 589 DAAGRWNSGAAGLLPDGGKLMHLSG------------------KRAAAAFEGCGKQDILV 630
Query: 333 TTIRDINTK-LCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHF 387
+++ + C+ + P L+ G++ I V+ + + +
Sbjct: 631 SSVELGPSSFDCD---VFDPIRLRSVGAVAIHHDKAGLRLVSVRDVTGTRLWTRWR 683
Score = 45.6 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 42/239 (17%), Positives = 84/239 (35%), Gaps = 22/239 (9%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
I LSPP GP PG FDF +++ + A+GY +P + + S
Sbjct: 159 APGMRIMTTGHLSPPGGPVEPGGFDFQRHAWFAQLGAVGYTR-VPILAIAPASEGN-AGL 216
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSF 124
+ ++ + I + A I L +A++LAI L
Sbjct: 217 AVFRVRMAAAEHILNVLPGDTGGFAVAVTTGARSAISQQALDDLRASNLAHLLAISGLHM 276
Query: 125 VVIPAGLIAI------LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
++ A + + L+ ++L + A G +I + ++++ R
Sbjct: 277 GLLTAFVFGLIRSILALIPPIALRWPTRKLAAGG--ALIVASGYLALSGGNVATER---- 330
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP-YSFSPDLLISEKGNLVALVD 236
+FV + V ++ + I + I +++L + + LVA+
Sbjct: 331 AFVMVAVALCAIMVNRRAISLRSVAIAAIIVLVLRPEALLGPGFQMSFAATTALVAVFG 389
>gi|110680398|ref|YP_683405.1| competence protein, putative [Roseobacter denitrificans OCh 114]
gi|109456514|gb|ABG32719.1| competence protein, putative [Roseobacter denitrificans OCh 114]
Length = 703
Score = 177 bits (448), Expect = 3e-42, Method: Composition-based stats.
Identities = 66/357 (18%), Positives = 127/357 (35%), Gaps = 49/357 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ ++ G+ MI S I
Sbjct: 386 GFQMSFAATTALVAVFGFMRDYKIMIGPKWVQPVVAVLLASGI---------------SG 430
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + HF+ I YGLIAN+L++P++ VV+PA ++A+ L L LD + +M GL
Sbjct: 431 LATAPVGAAHFNTISHYGLIANLLSVPVMGSVVVPAAVLALCLAPLGLDWLGLWIMGVGL 490
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVT-IVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
I+ + ++ P + + I + FL +V + R IG + + ++
Sbjct: 491 RWILEVGSFVAGLDGARSYVAGPGAAVLPMIALGFLWLVLWQGRARLIGVVPV---LLAF 547
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ + + P LI+E G LV L+ ++ + + FI W +A +
Sbjct: 548 WLWQGTVRPIGLIAENGTLVGLMTEDGRALSKAKGAGFIARNWLENDGEAVAQAEAAARW 607
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLS-CQLSDIL 331
D KS +V + ++ C DI+
Sbjct: 608 D-------------------------KSLAGVLPEGGHLVHLSGKRAAAGFDGCDARDIV 642
Query: 332 ITTIRDINTK-LCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHF 387
++++ T C+ + P L+ G++ I VK + + +
Sbjct: 643 VSSVELNPTGFDCD---VFDPIRLRGVGAVAIHHDKAGLRLVSVKDLTGTRLWTRWR 696
Score = 44.8 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 42/239 (17%), Positives = 84/239 (35%), Gaps = 22/239 (9%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
I LSPP GP PG FDF +++ + A+GY +P + + S
Sbjct: 172 APGMRIMTTGHLSPPGGPVEPGGFDFQRHAWFMQLGAVGYTR-VPILAIAPASEGN-AGL 229
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSF 124
+ ++ + I + A I L +A++LAI L
Sbjct: 230 AVFRVRMAAAEHILNVLPGDTGGFAVAVTTGARSAISQQALDDLRASNLAHLLAISGLHM 289
Query: 125 VVIPAGLIAI------LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
++ A + + L+ ++L + A G +I + ++++ R
Sbjct: 290 GLLTAFVFGLIRSILALIPPIALRWPTRKLAAGG--ALIVASGYLALSGGNVATER---- 343
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP-YSFSPDLLISEKGNLVALVD 236
+FV + V ++ + I + I +++L + + LVA+
Sbjct: 344 AFVMVAVALCAIMVNRRAISLRSVAIAAIIVLVLRPEALLGPGFQMSFAATTALVAVFG 402
>gi|316933938|ref|YP_004108920.1| ComEC/Rec2-like protein [Rhodopseudomonas palustris DX-1]
gi|315601652|gb|ADU44187.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris DX-1]
Length = 754
Score = 176 bits (447), Expect = 4e-42, Method: Composition-based stats.
Identities = 62/359 (17%), Positives = 139/359 (38%), Gaps = 40/359 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ ++ + +P + ++S + +++ +
Sbjct: 398 SFQMSFAATLGLVALV--QVGMPALFAKADS----SATARAALWGGREIALLLLASLVAG 451
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + HFH I YG+++N++A+P++S +V+PAG++ + M LD + +M G+
Sbjct: 452 LATMPYGAYHFHRITPYGVLSNLVAMPVVSAIVMPAGMLGLAAMPFGLDAPFWRIMEIGI 511
Query: 154 DIIIHIAHRISVAHNEFC-IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
D +I +A ++ + + + +L+ +T +R G + + I
Sbjct: 512 DWMIVVAQWVAALPGAVGRVTAFGAGPLLVASLGLVLIGLLRTPLRWGGLLGLIAAIGWA 571
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLI-SNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
P P++LI+ G VA+ + + S +F +W +A
Sbjct: 572 ALTPQ---PEVLIAGDGKQVAVRGADGRLHLMQSGADAFRLKEWLAA------------D 616
Query: 272 EDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL 331
D + + +SL R + CV +V + R D + C + ++
Sbjct: 617 ADARPPDAASL---------RAGVSCDSDGCVTALADGRLVALSLRPDGLADDCARAVLI 667
Query: 332 ITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSA-IENLHFPW 389
+T + + I + LQ G++ + + D ++F+ + A PW
Sbjct: 668 VTAGQPPPGC---AARTIGRDELQSNGAMALRR----SAADPMQFVTEPARPSGSSRPW 719
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 57/149 (38%), Gaps = 10/149 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ K P + + ARL PP P PG +DF Y++GI+A G+
Sbjct: 171 LSVRKGTAP-AVGSFVTLKARLQPPLQPLRPGSYDFARDLYFQGIAASGFVLGAIATAEP 229
Query: 62 SE--SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGL 112
+ + ++ + IRA++G A A+ L I
Sbjct: 230 PQDAGWRLRYAAVMQGLRDAIDARIRASLGGDVRAIATALLTGKRDAISTPVNDAMFVSG 289
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSL 141
+ ++L+I V+ + L +L++
Sbjct: 290 LGHVLSISGYHMAVVAGVVFFALRALLAM 318
>gi|91977310|ref|YP_569969.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris BisB5]
gi|91683766|gb|ABE40068.1| ComEC/Rec2-related protein [Rhodopseudomonas palustris BisB5]
Length = 764
Score = 176 bits (446), Expect = 6e-42, Method: Composition-based stats.
Identities = 72/390 (18%), Positives = 148/390 (37%), Gaps = 39/390 (10%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ F + L P P F +F++ ++ + +P + + +
Sbjct: 378 VDRRAITFRTLAIAALVVLLIAPEALVHP-SFQMSFAATLGLVALV--QIGMPALFATPD 434
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S T +++ + A + + + HFH + YG+I+N+LA+P++S
Sbjct: 435 SSTT----ARAALWGGREIMMLALASLVAGLATTPYAAFHFHRVTPYGVISNLLAMPVVS 490
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSFVT 182
+V+PAGL+ + M LD + + +M G+D ++ +A ++ I +
Sbjct: 491 VMVMPAGLLGLAAMPFGLDGVFWRIMEVGIDWMMIVALWVATLPGAIGKIAAFGSGPLLL 550
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI- 241
+ +L+ +T +R+ G I++ + P PD+LI+ G VAL + +
Sbjct: 551 ASLGIILLGLLRTPLRYGGLIIMMVATGWALLTPQ---PDILIAGDGRQVALRGADGRLR 607
Query: 242 SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
S F +W +A P +E +
Sbjct: 608 VMQSGADHFKLKEWLAADADPRAADAASLREG---------------------VSCDADG 646
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLE 361
CV +V + R D + C + ++I + + LI+ E+L+ G+L
Sbjct: 647 CVAALADGALVALSFRADGVADDCARATLVIALAQPPPDC---AARLISAELLKDSGALA 703
Query: 362 ITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
+ + D I + + L PW+
Sbjct: 704 LWR---NRGGDGGFVIEAARPKRLDRPWSP 730
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 3/110 (2%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ K P + + ARL PP P PG +DF Y++GI+A G+ +
Sbjct: 180 LSVRKGTAP-AVGSFVSLKARLQPPLSPLRPGSYDFGRDLYFQGIAASGFALGAITALDP 238
Query: 62 S--ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV 109
+ ++ + IR ++G A A+ L I
Sbjct: 239 PGDGGWRLRYTAIMQGLRDAIDARIRMSLGGDQRAIATALLTGRRDAIST 288
>gi|126726369|ref|ZP_01742210.1| competence protein [Rhodobacterales bacterium HTCC2150]
gi|126704232|gb|EBA03324.1| competence protein [Rhodobacterales bacterium HTCC2150]
Length = 699
Score = 175 bits (444), Expect = 9e-42, Method: Composition-based stats.
Identities = 68/390 (17%), Positives = 140/390 (35%), Gaps = 46/390 (11%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ A I + P PG F +F++ ++ G + ++
Sbjct: 354 VNRRAISLRAVALAATIVLILRPESLVSPG-FQMSFAATTALVAVFGAWRNVR------- 405
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
TW ++ Q + A + + F HF+ I +GLIAN+ ++P++
Sbjct: 406 --LPETWPRLPKFLQPIIG--VAASSAIAGLATAPFGAAHFNQIAQFGLIANLASVPVMG 461
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT- 182
+V+P ++A L I VM G+ I+ +A ++ P+T+ +
Sbjct: 462 LIVMPGAVLAGCLAPFGGAWIGLWVMKIGISWILSVAEFVAAMDGAVTYIPRPDTAVLPI 521
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+ + L ++ + +R +G +G + + + P +L+SE GNL L+ K I
Sbjct: 522 LSLGMLFLIVWRGRVRWLG---VGGVMAAILLWFQVERPQMLVSESGNLFGLMSKQGRIL 578
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFC 302
+++ F+ S W +N + + + K
Sbjct: 579 SHAKGDGFVASAW--------------------PENDGDGLDQSGANNRAGLVTADKVVL 618
Query: 303 VGCHRSDVIVGVLK-RKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLE 361
+++ K + I +C + I I + C ++ L+K GSL
Sbjct: 619 AKFGSQKILITRGKYAPEQIAQNCHKATISILAQKAPEVDGCR---ILGRAELKKLGSLS 675
Query: 362 ITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
I + I+ + WT+
Sbjct: 676 I------KEEKGELVILGAKQATGRRLWTR 699
Score = 68.3 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/237 (16%), Positives = 88/237 (37%), Gaps = 15/237 (6%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
T+ LS PSGP PG FDF S++ G+ +GY + + E ++
Sbjct: 169 LAPGMTLMTTGHLSQPSGPVEPGGFDFQRHSWFIGLGGLGYTRVPALELRAPEKGSSLA- 227
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILS 123
I +++ I A + + A+ + + + +A++LAI L
Sbjct: 228 --IFRARKAISRGILAGMQGREAGFAAAIAVGDRANLDQETVHALRDTNLAHLLAISGLH 285
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR-IPETSFVT 182
++ + ++ +I + ++P+ + + I I+ G +
Sbjct: 286 MGLLTGFVFTLIRLIFA--SVPYVALRLPIKKIAASCAMIAAFAYLLMSGASVATERAFI 343
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP--DLLISEKGNLVALVDK 237
+V+ L + + ++ + TI+++ SP + + LVA+
Sbjct: 344 MVMVMLGAILVNRRAISLRAVALAATIVLILRPESLVSPGFQMSFAATTALVAVFGA 400
>gi|99080975|ref|YP_613129.1| ComEC/Rec2-related protein [Ruegeria sp. TM1040]
gi|99037255|gb|ABF63867.1| ComEC/Rec2-related protein [Ruegeria sp. TM1040]
Length = 672
Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 64/352 (18%), Positives = 133/352 (37%), Gaps = 35/352 (9%)
Query: 31 FPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGT 90
F +FS+ + A + + + L + +++
Sbjct: 354 LSAGFQMSFSATLALVVAFQLL---------QPWFRPGRGGVLGAAARWGLALLVSSLV- 403
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMA 150
+ + F HF+ I YGL+AN+ A+P++ VV+P ++AI L + + F +M+
Sbjct: 404 -AGLATAPFGAAHFNMISHYGLLANLAAVPVMGAVVVPGAVLAICLAPIGASAVGFWIMS 462
Query: 151 WGLDIIIHIAHRISVAHNEFCIGRIPETSFVT-IVVEFLLMVFCKTNIRHIGSIMIGITI 209
G+ I+ +A ++ PE + +V L ++ + R G I I + +
Sbjct: 463 QGIAWILKVAETVATWPGARGHVVAPEAWILPVLVAGALWLLLWQGRFRWAGLIPIALAL 522
Query: 210 IILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHV 269
++ +P+S P++LIS G LV ++ + + + SF+ W +A
Sbjct: 523 VV---WPFSPRPEVLISADGGLVGVMTETGRALSRPSGKSFVAGIWLENDGDGMDQARAY 579
Query: 270 QKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSD 329
++ R + + F I + F ++ + + SC +
Sbjct: 580 RRI-----------PEGRDGKVQIFQSIGRRFVHVLGKTGL--------RAWQPSCARGE 620
Query: 330 ILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSA 381
++I +I L +TP L++ GS+ + + SA
Sbjct: 621 VIILSIEVEPPAA-GDCLWLTPRQLRETGSIAFAGNGAMITANGQARRLWSA 671
Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 83/219 (37%), Gaps = 17/219 (7%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S+ + P P + + A LSPP GPA PG FDF +++ G+ A+GY +P +
Sbjct: 138 ISLFEGSAPMP-GSWVMTTANLSPPQGPAEPGGFDFRRHAWFLGLGAVGYSR-VPVLRTG 195
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGLIA 114
+++++ +RA + A+ + +P +A
Sbjct: 196 PPEVLP-----VATLRAQLSERVRAAMPADTGGVATALMTGDRAHVPRQVTENLRASNLA 250
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL-DIIIHIAHRISVAHNEFCIG 173
++LAI L + + A L +L + W + + +A S +
Sbjct: 251 HLLAISGLHMGLFAGVVFASLRRCFALCPPI--ALRWPVKKLSAAVALVASFGYLLLSGA 308
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+ +V L+ V + ++ + +++L
Sbjct: 309 NVATERAFLMVAVMLVAVMLDRRAISVRAVALAAMLVLL 347
>gi|58698439|ref|ZP_00373348.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58535031|gb|EAL59121.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 729
Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 67/347 (19%), Positives = 140/347 (40%), Gaps = 45/347 (12%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+ I +KY A + + P PG F +FS+ +++
Sbjct: 411 IMIERKYRGLIAIAFAAAVILIIEPEAILKPG-FQMSFSAVLALVASY-----------Q 458
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
++ + K + ++ + A++ + + I +F+ + G+I N++AIPI
Sbjct: 459 INANKLFKIKIMKYFVSIMISSVIASL------ATVPYTIYNFNYFSISGIITNLVAIPI 512
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVA-HNEFCIGRIPETSF 180
++ ++IP G+I +LL+ L ++ I + ++ I++I + I+ + I P +S
Sbjct: 513 VTLIIIPLGIIYVLLIPLGIEWIIAPFIERPINSILYITNAIASLQYLVIPIRTFPASSI 572
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ I L + + N R +G I + I + +PD+LI+ N+ A N L
Sbjct: 573 IIITFGLLWLCLWERNWRFLGFFFIVLGICFSAAY---KTPDILINAD-NVAAKESDNLL 628
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
S +F+ W ++ Q+ + + P K L K
Sbjct: 629 YSLTRKSRNFVIKTW------------------AKQNGQNQILNHTKYSNPDKRL---KY 667
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSL 347
C+ ++ V + +K+ I +C D+ I + + + CN +
Sbjct: 668 GCIYNKGNNKSVLLAYKKEDISENCDKVDLTI-QLSEFDYSACNTKI 713
>gi|154248290|ref|YP_001419248.1| ComEC/Rec2-related protein [Xanthobacter autotrophicus Py2]
gi|154162375|gb|ABS69591.1| ComEC/Rec2-related protein [Xanthobacter autotrophicus Py2]
Length = 757
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 64/358 (17%), Positives = 138/358 (38%), Gaps = 36/358 (10%)
Query: 24 SPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
P PG +F++ ++A + + W ++I + L
Sbjct: 396 FTPEAALDPGT-QMSFAATLALVAAYERLRPMRALPRPD------GWVGQAAIWLAVLVG 448
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
A + + + I HF + YGL+AN+ A+P +SF+V+P GL+ +LLM D+
Sbjct: 449 GTALTSLVAGLATAPYGIFHFQRVAPYGLLANLAAMPAVSFMVMPFGLLGVLLMPFGFDH 508
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
+ + VM G++I++ ++ I+V + + + + + + + + +
Sbjct: 509 LAWPVMGKGIEIMVAVSDAIAVLPGADGRVDPVGAPTLALFSLGLTALCLLRGWLTAVAI 568
Query: 203 IMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNY-SNPPSFIFSQWKSALIT 261
+ + +++ P PD+LI+ VA+ + +S + + QW +
Sbjct: 569 VPFALALLMSGAPP---RPDILIAPDAQTVAVRGPDGRLSVLGARSQRLVVEQWMT---- 621
Query: 262 PFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMI 321
++ D+++ L + C + V +R + +
Sbjct: 622 --------REGDMRKAGAEGLAALFT---------CDPLGCTAPLPGGGTIAVSRRAESL 664
Query: 322 RLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIK 379
C S I++T RD+ + C ++TPE LQ+ G+L + +
Sbjct: 665 EADCLESRIVVT--RDVPPRRCPAQ-VVTPETLQRTGTLAYHFRKGMSSEGASGGDWQ 719
Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/280 (17%), Positives = 94/280 (33%), Gaps = 15/280 (5%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
P T + +A+L PP GPA PG DF + ++ GI +GY PK+ +E +
Sbjct: 188 PVGTHVTQLAQLLPPLGPAMPGAHDFGRNPWFAGIGGVGYGLGRPKLAEPAEPPLSVRLA 247
Query: 72 -KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPILS 123
+ +++ S IRA++ + A + I + +IL+I L
Sbjct: 248 MAVEAVRDSLSRRIRASLSGTPAEIAVALVAGDRSAIAPEVEESMRVSGLTHILSISGLH 307
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
++ L A M L +P + + + + +A A G +
Sbjct: 308 MALVAGTLFA--FMRGGLALVPALALGFPIKSLAAVAALTGSAAYLVLSGNDVPAQRSFV 365
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS---FSPDLLISEKGNLVALVDKNTL 240
+ +L + + +L P + + + LVA ++
Sbjct: 366 MTALVLSGVLVGRPALTLRTVGVAGVCVLAFTPEAALDPGTQMSFAATLALVAAYERLRP 425
Query: 241 ISNYSNPPSFI--FSQWKSALITPFHEAPHVQKEDLQEKN 278
+ P ++ + W + L+ V
Sbjct: 426 MRALPRPDGWVGQAAIWLAVLVGGTALTSLVAGLATAPYG 465
>gi|39935969|ref|NP_948245.1| ComEC/Rec2-like protein [Rhodopseudomonas palustris CGA009]
gi|39649823|emb|CAE28345.1| possible DNA uptake protein, ComEC [Rhodopseudomonas palustris
CGA009]
Length = 755
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 67/388 (17%), Positives = 143/388 (36%), Gaps = 39/388 (10%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ F + L P P F +F++ ++ I +P + ++
Sbjct: 369 VDRRAITFRTLALAALVVLLIAPEALVHP-SFQMSFAATLGLVALI--QIGMPALFAQAD 425
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S + + L A + + HFH I YG+++N+ A+P++S
Sbjct: 426 SSTAARVALWGGREIALL----ALASLVAGFATMPYAAYHFHRITPYGVLSNLAAMPVVS 481
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSFVT 182
+V+PAGL+ + M LD + +M G+D +I +A ++ + +
Sbjct: 482 AIVMPAGLLGLAAMPFGLDAPFWRIMELGIDWMILVAQWVASLPGAVGRVTAFGTGPLLV 541
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI- 241
+ +++ ++ +R G++ +G+ + P P++LI+ G VA+ + +
Sbjct: 542 ASLGIVMLGLLRSPLRWGGALAVGVAVAWAALTPQ---PEVLIAGDGRQVAVRGADGRLH 598
Query: 242 SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
S +F +W +A D + + +SL R +
Sbjct: 599 LMQSGADAFRLKEWLAA------------DADSRAPDAASL---------RAGVSCDPDG 637
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLE 361
CV +V + R D + C + ++IT + + +I + LQ G+L
Sbjct: 638 CVTPLADGRLVALSLRPDGLADDCARAVLIITAGQPPPDC---AARVIGRDELQANGALA 694
Query: 362 ITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ + + PW
Sbjct: 695 LRRSGSD---PGLFVAEATRPRGPSRPW 719
Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 57/149 (38%), Gaps = 10/149 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ K P + + ARL PP P PG +DF Y++GI+A G+
Sbjct: 171 LSVKKGTAP-TVGSFVTLKARLQPPLQPLRPGSYDFARDLYFQGIAASGFVLGAITTTEP 229
Query: 62 SE--SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGL 112
+ + ++ + IRA++G A A+ L I
Sbjct: 230 PQDGGWRLRYAAVMQGLRDAIDARIRASLGGDPRAIATALLTGKRDAISTPVNDAMFISG 289
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSL 141
+ ++L+I V+ + L +L+L
Sbjct: 290 LGHVLSISGYHMAVVAGVVFFALRALLAL 318
>gi|254462665|ref|ZP_05076081.1| competence protein [Rhodobacterales bacterium HTCC2083]
gi|206679254|gb|EDZ43741.1| competence protein [Rhodobacteraceae bacterium HTCC2083]
Length = 684
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 64/353 (18%), Positives = 130/353 (36%), Gaps = 45/353 (12%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + +A+ ++ + + + W+ IK + ++ A + T
Sbjct: 365 FQMSFAATTALVVVFNTISRLNAGKPPRHVIWR---MIKGTVISSAVAGLATL------P 415
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
HF+ I +GLIAN+ ++P++ +VIP ++A+ L+ + L+ +P VM WGLD I+
Sbjct: 416 IAAAHFNNIAQFGLIANLASVPLMGILVIPLAVVAVCLLPVHLEWLPLTVMGWGLDWILS 475
Query: 159 IAHRISVAHNEFC-IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+A +S + P +++TI L + + R + I + + F +
Sbjct: 476 VAREVSSWDGAIHKVPAPPSWAYLTICFGLLGLALMISKFRFVALAPIVVGV---FGWVT 532
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEK 277
PD+LIS+ G LV ++ + F+ W P + ++ D +
Sbjct: 533 DQRPDILISDTGVLVGVLGAEGRALSKEKGAGFVAGVWLENDGDPSFQRAAARRWDGPKG 592
Query: 278 NQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRD 337
++ + ++ L C+ SDI + +
Sbjct: 593 ATRIGVHVIFAAAGKRGL------------------------DAFDGCKASDIAVFSEMF 628
Query: 338 INTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
C + + L + GS+ I+I N + + W
Sbjct: 629 ERDVPCR---VFDQKSLGRSGSIAISIKENGALN-----VTTARGVAGRRYWN 673
Score = 64.8 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/246 (17%), Positives = 88/246 (35%), Gaps = 17/246 (6%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
A + A LSPP+GPA P FDF +++ I +GY ++ ++
Sbjct: 154 AGARVMTTAHLSPPAGPAEPHGFDFQRHAWFTQIGGVGYARVPLLLVAYPAEGLSFF--- 210
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFV 125
++ + N I ++ A A+ + + + L +A++LAI L
Sbjct: 211 --KLRIALSNRINLHLDGQTGAFAAAVMTGDRSGLSMETLKNLRHSNLAHLLAISGLHMG 268
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISV-AHNEFCIGRIPETSFVTIV 184
++ A + A L L IP + I + I+ + G + +
Sbjct: 269 LLVAFVFAALR--FGLSLIPSLASGSAVKKIAALGGLIAAGGYLGLSGGSVATERAFIMA 326
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP--DLLISEKGNLVALVDKNTLIS 242
L V + + ++ + II++ P + + LV + + + ++
Sbjct: 327 AVALGAVMLERRAISLRAVALAAMIILIRRPDAITGPGFQMSFAATTALVVVFNTISRLN 386
Query: 243 NYSNPP 248
P
Sbjct: 387 AGKPPR 392
>gi|126735651|ref|ZP_01751396.1| competence protein, putative [Roseobacter sp. CCS2]
gi|126714838|gb|EBA11704.1| competence protein, putative [Roseobacter sp. CCS2]
Length = 720
Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 70/390 (17%), Positives = 140/390 (35%), Gaps = 52/390 (13%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ A + L P PG F +F++ ++ G +
Sbjct: 347 LGRRALTLRAVAMAAILVLLWQPEALIGPG-FQMSFAATTALVAVFGALR-----RFDFS 400
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
W+ +S + SF+ + + F HF+ I YGLIAN+L++P++
Sbjct: 401 RWPRWSRAILSVVLSSFIA----------GLATAPFAAAHFNQIAHYGLIANVLSVPLMG 450
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT- 182
+V+PA ++A+ L L +I +M GL I+ +A +S P+ +
Sbjct: 451 VLVMPAAVLAVCLAPFGLWSIGLWLMEIGLRWILFVAATVSAREGALGHVWAPDWYVLPI 510
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+ + L +V + G++ + I + + P LLI++ G+L+ L I
Sbjct: 511 LSLGLLWIVLVAGRGKIAGALAV---ICAGVLWHQTERPALLIADSGSLIGLSGAEGRIL 567
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFC 302
+ F+ W P + ++ L+ + + ++
Sbjct: 568 SKPTGNGFVAGIWLENDGAPVPQVQAASRDGLRVQGRVIAADL----------------- 610
Query: 303 VGCHRSDVIVGVLKRKDMIRL--SCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
D V + K + C +D+LI+ D + C L+ + G+L
Sbjct: 611 -----GDWRVLQVSGKTALADLVGCDGADVLISNQVDAGARPC---LVYDVARFRNTGAL 662
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
+ I + I + + PW
Sbjct: 663 ALNIAANGD-----LLIETAHHVSGQRPWN 687
Score = 72.9 bits (177), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/241 (17%), Positives = 87/241 (36%), Gaps = 14/241 (5%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
F + LSPP+GPA PG FDF +++ + A+GY + P + S +
Sbjct: 161 FTPGDVLILTGHLSPPAGPAEPGGFDFQRHAWFLQLGAVGYTRT-PVLRLSVPNDPDIGT 219
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILS 123
+ + ++ + ++ + A A+ + I L +A++LAI L
Sbjct: 220 RLFA-MRMAISQAVQKAMPGEPGAFAAAIMTGDRSAIGQATLTDLRTSNLAHLLAISGLH 278
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI-AHRISVAHNEFCIGRIPETSFVT 182
++ + A + L IP + W I I A + + G +
Sbjct: 279 MGLLTGFIFAFVRY--GLALIPGVALRWPTKKIAAICALCVGAFYLALSGGSVSTERAYI 336
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP--DLLISEKGNLVALVDKNTL 240
+V + V + ++ + +++L+ P + + LVA+
Sbjct: 337 MVAVMFVAVLLGRRALTLRAVAMAAILVLLWQPEALIGPGFQMSFAATTALVAVFGALRR 396
Query: 241 I 241
Sbjct: 397 F 397
>gi|83592937|ref|YP_426689.1| ComEC/Rec2-like protein [Rhodospirillum rubrum ATCC 11170]
gi|83575851|gb|ABC22402.1| ComEC/Rec2-related protein [Rhodospirillum rubrum ATCC 11170]
Length = 739
Score = 173 bits (438), Expect = 4e-41, Method: Composition-based stats.
Identities = 67/383 (17%), Positives = 129/383 (33%), Gaps = 40/383 (10%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+ G+A L F +F++ I+ G + +
Sbjct: 379 ALAGVAVLLIAPESLMGASFQMSFAAVIALIATYGAL-GPQAGRWRAGGGGGMGRAAALY 437
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ L+ + A + T + HFH + +YG++AN++A+P+ F V+P L+ +
Sbjct: 438 LGGVALSTVVATVATL------PYGAYHFHRVALYGVVANMIAVPLTGFWVMPWCLVLLA 491
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCK 194
LM L+ + + WGLD I+ +A + I P + + + L +
Sbjct: 492 LMPFGLEGLAMAPLGWGLDGIVAVARWVGGWPGALLAIPDGPGWALGLVSLGGLWLCLWT 551
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFS 253
R G + I + + + + P PD+LI+++G L+A+ L+ + F
Sbjct: 552 RPWRLAGVVPILVGMTVPWLTP---PPDVLINDEGTLIAVRAAGGQLVFSDFRKARFTRE 608
Query: 254 QWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVG 313
W A E + + L C+ R +++
Sbjct: 609 VWGEAFGGAAGEG----------------RFPVAGASADGRLVCDGEGCLYR-RPGLVIA 651
Query: 314 VLKRKDMIRLSCQLSDILITTIRDIN------TKLCNVSLLITPEILQKQGSLEITIIPP 367
+ + L+D++I +I L G+ + I
Sbjct: 652 LPRTLGAAFEDRALADLVIVPFARFASPPPPLAPGRGPGWIIDRGDLIGGGAHALWIADD 711
Query: 368 SNDNDKVKFIIKSAIENLHFPWT 390
+ A E H PWT
Sbjct: 712 GQVTLR-----TVAGERGHRPWT 729
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/214 (17%), Positives = 70/214 (32%), Gaps = 10/214 (4%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS-SESHNTWTWK 71
+ I + +L+PP P PG+FDF +++ I +G+ + S +E
Sbjct: 181 PGSRIAVLGQLAPPPTPVAPGVFDFARGLWFERIGGVGFALGPLRGRGSLAEGPVPRIRA 240
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPILSF 124
I +Q I A T + + I ++++LAI L+
Sbjct: 241 AIQGWRQGVTARIIAAEPTLHGPLTAALITGEQRAIDPEIQEAMRASGLSHLLAISGLNM 300
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
+ A + +L+ L P + W + + A A G I+
Sbjct: 301 SL--AAGLMFVLVRGGLALWPRAALLWPIKKLAAAAALAGCAAYLVLSGAGVPAERAFIM 358
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+L+ + + +L P S
Sbjct: 359 TGLVLLAVLVDRTALSMRTLALAGVAVLLIAPES 392
>gi|83953841|ref|ZP_00962562.1| competence protein [Sulfitobacter sp. NAS-14.1]
gi|83841786|gb|EAP80955.1| competence protein [Sulfitobacter sp. NAS-14.1]
Length = 682
Score = 173 bits (437), Expect = 6e-41, Method: Composition-based stats.
Identities = 67/393 (17%), Positives = 144/393 (36%), Gaps = 51/393 (12%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L I ++ A I + P PG F +F++ ++ G+ + +
Sbjct: 337 LIIGRRALTLRAVAIAATIVLVLRPEALTGPG-FQMSFAATTGLVAIFGWLRNAEVSLGP 395
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S++ F + HF+ I YGLIAN+L++P+
Sbjct: 396 KWLAPAVATVISSAVAGGF---------------TAPIGAAHFNTIAQYGLIANLLSVPL 440
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ +V+PA + A+++ L L+ IP VM GL I+ +A ++ P +
Sbjct: 441 MGVLVMPAAVAALVMAPLGLEWIPLQVMGAGLRWILLVAQGVAEIDGAQGHVAAPGPWVL 500
Query: 182 -TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ + FL ++ + +R G +G I + + P +LIS+ G+LV ++
Sbjct: 501 PLLALGFLWVLLWQGWLRFAG---LGAVIAAGVLWHGAERPTVLISDTGSLVGVMTPTGR 557
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ + F+ W D ++++++ + +R +
Sbjct: 558 ALSKAKGAGFVALNWLE------------NDGDGADQDRAAARWPIRPKIGGR------- 598
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
++ + ++ +D +I + L + P+ L+ G++
Sbjct: 599 ---------EVIHLSGKRARAAFGACRADQIIALSVVPDPPLTGGCDVFDPDRLRSTGAV 649
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
+++ N ++ + A L W K R
Sbjct: 650 ALSL---DNGRVTMQTARQKAGARLWTAWPKDR 679
Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 85/234 (36%), Gaps = 14/234 (5%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
+ LSPPSGP P FDF +++ G+ A+GY + + + +
Sbjct: 155 PGLGVMTTGHLSPPSGPVEPEGFDFQRHAWFAGLGAVGYSRTPLLAATPAGAGHGGLAVF 214
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFV 125
+ + S I+ + A+ I L +A++LAI L
Sbjct: 215 RARMAAS--ARIQRILPGDIGGFATAITTGDRSAISQDALQDLRASNLAHLLAISGLHMG 272
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR--IPETSFVTI 183
++ A + L ++L+L +P+ + W I ++ + G E +F+ +
Sbjct: 273 LLSAVVFGALRIVLTL--VPWIALRWPTRSIAAAGALVAASGYLLLSGGNVATERAFIMV 330
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS-PDLLISEKGNLVALVD 236
V ++ + + + +++L + + + LVA+
Sbjct: 331 AVALGALIIGRRALTLRAVAIAATIVLVLRPEALTGPGFQMSFAATTGLVAIFG 384
>gi|328543727|ref|YP_004303836.1| ComEC/Rec2-related protein [polymorphum gilvum SL003B-26A1]
gi|326413471|gb|ADZ70534.1| ComEC/Rec2-related protein [Polymorphum gilvum SL003B-26A1]
Length = 763
Score = 173 bits (437), Expect = 7e-41, Method: Composition-based stats.
Identities = 61/344 (17%), Positives = 135/344 (39%), Gaps = 9/344 (2%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ I+ G + P+ +++ +L + G
Sbjct: 409 GFQMSFAAVLCLIAVYGAWARRPRAAGFERRRAAGAAERMLRRAGLWLTGLVVTSLVAG- 467
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ I + HF YGLI N+LA+P++SFVV+PAG++A+ L+ + P +M G+
Sbjct: 468 VATGIVGVYHFERASPYGLIGNLLAMPVVSFVVMPAGVLALALLPFGVAAGPLWIMGRGI 527
Query: 154 DIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+ ++ A ++ NE +G +P ++ ++ MV +R + + L
Sbjct: 528 EAMLAAARWTQALTPNEGVVGSLPASAACLLIGGLFAMVLAAGRMR---LAALAPLGLGL 584
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
D+ I ++G +A D + + + P F W A P +
Sbjct: 585 ALALAHRPADVHIPDRGVGLAARDGSGTLRVSARRPGFASEGWLRAEAVAPSAFPSRRMT 644
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
+ Q++ ++ +L G + + + +++ + + C +D++I
Sbjct: 645 EEQQRCDAAGCVVLAHAPSAPGS--DAESARGPRTAPLTIALVRDRRALPTDCVRADVVI 702
Query: 333 TTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKF 376
T ++ + C L++ G+L + ++ V+
Sbjct: 703 TQLQ--APEGCGGQLVVDAVTRATTGALALWLVAEEGRTRIVRL 744
Score = 74.4 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGY-FYSIPKMI 59
+L D A + ARL PPSGP PG +DF F ++Y+GI A G+ F ++ +
Sbjct: 180 VLVRGDGADGLAAGDAVALRARLFPPSGPVRPGGYDFAFRAFYQGIGATGFAFGAVQPVD 239
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI---------FLIKHFHCIPVY 110
++++ ++ IR +G + + ++ + +
Sbjct: 240 LGPRPAALEIRRQVALVRDGLGERIRRQLGDGDAGAIAVALLVGLRGGISAEAQDSLRQA 299
Query: 111 GLIANILAIPILSFVVIPAGLIAILLMILS 140
GL A++LAI L + G+ A +L +L+
Sbjct: 300 GL-AHVLAISGLHMALFSGGVYAAVLAVLA 328
>gi|83951833|ref|ZP_00960565.1| competence protein [Roseovarius nubinhibens ISM]
gi|83836839|gb|EAP76136.1| competence protein [Roseovarius nubinhibens ISM]
Length = 685
Score = 172 bits (436), Expect = 7e-41, Method: Composition-based stats.
Identities = 60/352 (17%), Positives = 131/352 (37%), Gaps = 51/352 (14%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ ++ G S W + + ++ + A +
Sbjct: 373 GFQMSFAATTALVAVFG---------RVSSYERGWVPGWLRPVTTVVISSLVAGL----- 418
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + F HF+ I YGL+AN++++P++ V+PA ++++ LM L + + +M GL
Sbjct: 419 -ATAPFAAAHFNQIAHYGLLANLVSVPLMGVWVMPAAVLSVSLMPLGGEALGLWIMGLGL 477
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVT-IVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
I+ +AH ++ + P + + L ++ + +R G + + +
Sbjct: 478 RWILGVAHWVAELDGARGVVTAPGPWVIPCLAWGALFVILWQGKLRFFGLLPV---VAGF 534
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ + + P +LISE G LV ++ + + F+ W +A +
Sbjct: 535 WIWSGAERPKVLISEDGRLVGVMTEAGRALSRERGAGFVAMNWLENDGDAGDQAAAAARW 594
Query: 273 DLQEK--NQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDI 330
+ + LK + + + R F GC S +V K D L CQ
Sbjct: 595 EAGAAEIARWDLKVLRGAQEVRGFD--------GCTASQRLVT-PKDPDQNALPCQ---- 641
Query: 331 LITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAI 382
+ +P L++ G++ + + + I + +
Sbjct: 642 -----------------VFSPRSLRQSGAVALYLRKGEVITITARQISGTRL 676
Score = 43.2 bits (100), Expect = 0.079, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 18/146 (12%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
+ A LSPP GP PG FDF +++ + A+GY + +W
Sbjct: 163 PGQIVMTTAHLSPPGGPVEPGGFDFQRHAWFLRLGAVGYTRVPVLRATDEAAGFSW---- 218
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFV 125
+ ++ + ++A + A+ + + L +A++LAI L
Sbjct: 219 -AGLRLAMSERVQAALPGEPGGFAAAIITGDRSAMTQETLQALRVSNLAHLLAISGLHMG 277
Query: 126 VIPAGLIAILLM------ILSLDNIP 145
++ + A L + L+L
Sbjct: 278 LLAGFVFAALRLIMACVPPLALRWPI 303
>gi|114764300|ref|ZP_01443528.1| competence protein [Pelagibaca bermudensis HTCC2601]
gi|114543248|gb|EAU46265.1| competence protein [Roseovarius sp. HTCC2601]
Length = 678
Score = 172 bits (435), Expect = 1e-40, Method: Composition-based stats.
Identities = 59/338 (17%), Positives = 126/338 (37%), Gaps = 41/338 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ ++ G + + + + + L + +++ S
Sbjct: 365 GFQMSFAATLALVAVFGAMR------------DLAIERGLPRLARPLLTLVVSSVT--AS 410
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + + HF+ + YGL+AN++A+P++ +V+P ++ LLM L L+ VMA GL
Sbjct: 411 LATAPVSMAHFNIVSHYGLVANLVAVPVMGLIVVPMAVVTALLMPLGLEATALWVMALGL 470
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVV-EFLLMVFCKTNIRHIGSIMIGITIIIL 212
D I+ +A ++ R P + ++ L++ + R G + + + +
Sbjct: 471 DWILTVAGTVTGWDGALGQVRAPGAWVLPLLASGGLILCLWQGRGRWAGLLPLSLAV--- 527
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ P LLIS+ G LV + + F+ + W
Sbjct: 528 TLWASGGRPALLISDSGTLVGAMTPEGRALSRERGAGFVAAVWLE--------------N 573
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
D Q Q+ + + + I + + H KR C ++++
Sbjct: 574 DGQAGGQAVAAALWPEHEQPRVARISVAGAMVTHFQG------KRAAAGFRGCGARELVV 627
Query: 333 TTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSND 370
++ + C + PE L + G++ I P
Sbjct: 628 SSTDLPDWPGCE---IFDPERLARTGAVAIWQTPTGPR 662
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 85/243 (34%), Gaps = 17/243 (6%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ P LS P+G A PG FDF +++ + A+GY + + ++
Sbjct: 147 SQGNPPPRPGDVAILTGHLSGPAGAAEPGGFDFRRHAWFLRLGAVGYTRTPVLRLVPAQR 206
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANIL 117
+ ++ +RA + A A+ + I + L +A++L
Sbjct: 207 DTP-----VLRLRLKIAERVRAVLPGETGAFAAAIMTGDRSAIGLQTLQALRHSNLAHLL 261
Query: 118 AIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW-GLDIIIHIAHRISVAHNEFCIGRIP 176
AI L ++ + ++L L W G I +A + + G +
Sbjct: 262 AISGLHMGLLAGVVFTATRLVLLL--PRHTRHNWPGKKIAAGVALVAAAGYLALSGGNVA 319
Query: 177 ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP--DLLISEKGNLVAL 234
+V L+ + C + S+ + I+++ P + + LVA+
Sbjct: 320 TQRAFVMVAVMLVALLCNRRALSLRSVALAALIVLVLRPEALLGPGFQMSFAATLALVAV 379
Query: 235 VDK 237
Sbjct: 380 FGA 382
>gi|260433607|ref|ZP_05787578.1| competence protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260417435|gb|EEX10694.1| competence protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 678
Score = 171 bits (434), Expect = 1e-40, Method: Composition-based stats.
Identities = 71/385 (18%), Positives = 136/385 (35%), Gaps = 44/385 (11%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I ++ A I L P PG F +F++ ++ G +P
Sbjct: 334 IDRRAISLRAVAVAALIVLLLRPESVLSPG-FQMSFAATTALVAVFGALRDMPAFPGPRW 392
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ A+ G + + HF+ + YGL+AN+L +PI+
Sbjct: 393 --------------LRAFGGVLASSAIAG-LATAPIGAAHFNMVSHYGLVANVLTVPIMG 437
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSFVT 182
+V+PA + A LL + L+ + VM +GL I+ ++ +S P + T
Sbjct: 438 MLVVPAAVFAALLAPIGLEALAIHVMGFGLRWILFVSDWVSGLDGARGFVADPSDFVLPT 497
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+ + V + IR G++ + ++ L + P++LI++ G LV ++ ++
Sbjct: 498 FALGAVFAVLWQGRIRWFGAV---VALVALILWGQGDRPEVLIADTGALVGVMTEHGRAL 554
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFC 302
+ FI S W D + Q++ + + R F
Sbjct: 555 SKKKGAGFIASVWLE------------NDGDSASQEQAASRWPGATGLVRVFP------- 595
Query: 303 VGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEI 362
+V+ KR C I+ + + C L+ P+ L GS+ +
Sbjct: 596 --MDGYEVVHVTGKRAAKTVKGCSAKQIVASPVPLKLHGDC---LVFDPDDLPLTGSVAL 650
Query: 363 TIIPPSNDNDKVKFIIKSAIENLHF 387
+ + N + S E
Sbjct: 651 SGGKIVSSNAIGGQRLWSPAEGNRR 675
Score = 69.4 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 100/270 (37%), Gaps = 22/270 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ + I A LSPP GP PG FDF ++++ + A+GY +P ++ S
Sbjct: 141 LSLHGEDTTPEPGQRIMTTAHLSPPQGPVEPGGFDFRRHAWFQRLGAVGYTR-VPVLMAS 199
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IA 114
S+ + +I++++ + + +R + A+ I L +A
Sbjct: 200 PPSN---SGVRIAALRMAISDRVREILPGDVGGFAAAVTTGDRSGIGRATLDNLRASNLA 256
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII-IHIAHRISVAHNEFCIG 173
++LAI L ++ + +L +P + W I A + A+ G
Sbjct: 257 HLLAISGLHMGLLAGFVFLAFRTGFAL--VPAVALRWPTRKIAAVCALVAAAAYLMLSGG 314
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP--DLLISEKGNL 231
+ +V L V + ++ + I++L SP + + L
Sbjct: 315 NVATERAFVMVSVMLGAVLIDRRAISLRAVAVAALIVLLLRPESVLSPGFQMSFAATTAL 374
Query: 232 VALVDKNTLISNYSNPPSFIFSQWKSALIT 261
VA+ + P+F +W A
Sbjct: 375 VAVFGA------LRDMPAFPGPRWLRAFGG 398
>gi|56697020|ref|YP_167382.1| competence protein [Ruegeria pomeroyi DSS-3]
gi|56678757|gb|AAV95423.1| competence protein [Ruegeria pomeroyi DSS-3]
Length = 676
Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 58/356 (16%), Positives = 126/356 (35%), Gaps = 50/356 (14%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ ++ G+ E+ + ++ + ++ A +
Sbjct: 365 GFQMSFAATVALVAVFGWLR---------EAEIGLGPRWLNPVAGVVISSAVAGL----- 410
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + HF+ + YGL+AN++++P++ VVIPA ++A++L L LD I VM GL
Sbjct: 411 -ATAPIGAAHFNTLAHYGLVANLMSVPLMGLVVIPAAVLALVLAPLGLDWIGLEVMGLGL 469
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVT-IVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
I+ +A ++ P+ + + + L +V + R G ++
Sbjct: 470 RWILGVADWVAGMDGARGYVMRPDWVVLPILTLGALWLVLWRGRARLAGVPVMAAA---F 526
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHE---APHV 269
+ + + P +LI++ G LV ++ + + FI W + A
Sbjct: 527 WLWSGAERPGVLIADTGGLVGVMTETGRALSKPRGAGFIAGVWLENDGDGADQMAAAARW 586
Query: 270 QKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSD 329
ED+ K + EI+ R + C +
Sbjct: 587 PGEDMLRKIRVGEVEIVHVTGKRAAQGLS-------------------------DCDRAQ 621
Query: 330 ILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENL 385
++++ + C + P+ L G+L I + + +
Sbjct: 622 LIVSAVPLAVNGPCE---VYDPKRLALTGALSIGPKGVESAAHLSGRRLWNGAARP 674
Score = 59.4 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 44/234 (18%), Positives = 86/234 (36%), Gaps = 12/234 (5%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
+ I A LSPP GP PG FDF ++++G+ AIGY +P ++ +
Sbjct: 151 EPGSRIMTTAYLSPPQGPVEPGGFDFRRHAWFQGLGAIGYTR-VPVLLARPPDRSERDM- 208
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSF 124
+ +++ + IRA + A+ + L +A++LAI L
Sbjct: 209 SVFTLRMAASAHIRARLPGDVGGFAAAVTTGDRSGVSQGALDALRASNLAHLLAISGLHM 268
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
++ + L + LSL P + + A ++ + G + +V
Sbjct: 269 GLLAGFVFTALRVALSL-IPPLALRLPVRKLAALGALAVAAGYLALSGGNVATQRAFVMV 327
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP--DLLISEKGNLVALVD 236
L V + ++ + I+++ P + + LVA+
Sbjct: 328 AVMLCAVLVDRRALSMRAVAMAALIVLVLRPEALLGPGFQMSFAATVALVAVFG 381
>gi|259418796|ref|ZP_05742713.1| competence protein [Silicibacter sp. TrichCH4B]
gi|259345018|gb|EEW56872.1| competence protein [Silicibacter sp. TrichCH4B]
Length = 673
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 63/352 (17%), Positives = 136/352 (38%), Gaps = 36/352 (10%)
Query: 31 FPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGT 90
F +F++ + F ++ M + + + +++
Sbjct: 356 LSAGFQMSFAATLALVVV---FRAVQPMFRPGRG------GHLGGALRWIGALVVSSLV- 405
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMA 150
+ + F HF+ + YGLIAN+ A+P++ VV+P ++AI L + F +M+
Sbjct: 406 -AGVATAPFGAAHFNMVSHYGLIANLAAVPVMGAVVVPGAVLAICLAPFGGSAVGFWIMS 464
Query: 151 WGLDIIIHIAHRISVAHNEFCIGRIPETSFVT-IVVEFLLMVFCKTNIRHIGSIMIGITI 209
G+ I+ +A ++ PE + +V+ LL++ + +R +G IG+
Sbjct: 465 QGISWILTVADTVAGWPGARGQVVAPEPWMLPVLVMGALLLLLWQGQLRWVGLAPIGVA- 523
Query: 210 IILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHV 269
LF +P S P++LIS G LV ++ + SF+ W +
Sbjct: 524 --LFFWPSSPRPEVLISADGGLVGVMTSEGRALSRPRGKSFVAGIWLENDGDGADQVEAF 581
Query: 270 QKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSD 329
+ +++ + + F +++ F ++ + ++SC +
Sbjct: 582 DRVPARQQG-----------KVQTFQAVERHFVHVLGKTGL--------SEWQMSCAPHE 622
Query: 330 ILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSA 381
+++ +I L +TP+ L+ GS+ T + + SA
Sbjct: 623 VIVLSIEAEAPDG--ECLWLTPKALRDTGSIAYTQRGEMITANAGARRLWSA 672
Score = 63.7 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/211 (19%), Positives = 80/211 (37%), Gaps = 16/211 (7%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + + A LSPP GPA PG FDF +++ G+ A+GY +P +
Sbjct: 147 PPEPGSWVMTTAHLSPPQGPAEPGGFDFRRHAWFLGLGAVGYSR-VPVLRSGPPEVLP-- 203
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGLIANILAIPIL 122
+++I+ F + +RA++ A+ + +P +A++LAI L
Sbjct: 204 ---VATIRARFSDWVRASMPERTGGVATALITGDRAHVPRHVTEDLRASNLAHLLAISGL 260
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR-IPETSFV 181
+ + A L +L P + W + I ++ G +
Sbjct: 261 HMGLFAGVIFASLRRGFAL--WPRIALRWPVKKISAAVALVASFGYLLLSGANVATERAF 318
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+V L+ V + ++ +++L
Sbjct: 319 LMVAVMLVAVLMDRRAISVRAVAFAAVLVLL 349
>gi|118589994|ref|ZP_01547398.1| ComEC/Rec2-related protein [Stappia aggregata IAM 12614]
gi|118437491|gb|EAV44128.1| ComEC/Rec2-related protein [Stappia aggregata IAM 12614]
Length = 751
Score = 169 bits (429), Expect = 6e-40, Method: Composition-based stats.
Identities = 59/376 (15%), Positives = 138/376 (36%), Gaps = 32/376 (8%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ ++ + + + + W + + + +
Sbjct: 364 GFQMSFAAVICLVAVYDLWRQRDRFGSPGDRVSGWGMATCVFLGKWVAGLLVTALV--AG 421
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ I HF I YG++ N+L +P+ S +V+P G++A +LM L +P VM++G+
Sbjct: 422 LATGIIGAHHFSRIAPYGVVGNLLGMPVFSLLVMPMGVLAFVLMPFGLAALPLAVMSFGV 481
Query: 154 DIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+++ +A + GR+ + ++ + R + + ++I+
Sbjct: 482 SLLLKVASFTAALDAGGGASGRLDGAAASLLLSALFAGLLLPGRKRLLAGFPLLAGLLIV 541
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
FT PD+ I+ G+ +A D+ + + SF W + P + +
Sbjct: 542 FT---DRPPDIQIAASGSRIAARDETGSLRWAARGRSFATDLWLQSEGVPDDAILSRKMK 598
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
Q K + ++S + + K + ++ C+ +D+++
Sbjct: 599 SPQRKCDDDGCVVRAYRIGEGSDSQQQSLPY------LAIAQPKTFEAFQMDCRYADLIV 652
Query: 333 TTIRDINTKLCNVSLLITPEILQKQGSLEITIIPP------------------SNDNDKV 374
T + I +++C+ L++ E +G++ I + D
Sbjct: 653 TDL--IASEICSSRLVLDQETRSARGAVSIWLSASASSQKAADANGLAGAQGHPPDGKLK 710
Query: 375 KFIIKSAIENLHFPWT 390
+ AI + PW
Sbjct: 711 IDKLVFAIPDPPRPWH 726
Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/220 (19%), Positives = 86/220 (39%), Gaps = 19/220 (8%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
T++ ARL PP+GP FPG +D++F ++Y+ I A G+ + P +I +S +
Sbjct: 144 GVEVGETVQASARLFPPAGPVFPGGYDYSFRAFYQQIGATGFSFGSPTVIKVPDSELGFR 203
Query: 70 WK-KISSIKQSFLNEIRANIGTYGSASASIFL--------IKHFHCIPVYGLIANILAIP 120
++ ++ + I+A++ + + L + + +A+ILAI
Sbjct: 204 PAVAVAKLRSNIAERIKASLADGPETALIVALLVGDRSGIAEQQEEVLRSAGLAHILAIS 263
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
L + G +L+ILSL V L +H +S + +
Sbjct: 264 GLHMALFAGGAYGAVLLILSL------VPVLTLRWPVHKWAALSALGAAVVYLLLSGGAV 317
Query: 181 VT----IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
T +++ + + + +++L P
Sbjct: 318 ATQRSFLMIAIVFIGILVGRRGLTLRSVALAGLVLLVIAP 357
>gi|225629731|ref|ZP_03787690.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225591415|gb|EEH12496.1| ComEC/Rec2 family protein [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 522
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 52/293 (17%), Positives = 117/293 (39%), Gaps = 40/293 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +FS+ +++ ++ + K + ++ + A++
Sbjct: 269 GFQMSFSAVLALVASY-----------QINANKLFKIKIMKYFVSIMISSVIASL----- 312
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + I +F+ + G+I N++AIPI++ ++IP G+I +LL+ ++ I ++ +
Sbjct: 313 -ATVPYTIYNFNYFSISGIITNLVAIPIVTLIIIPLGIIYVLLIPFGIEWIIAPLIERPI 371
Query: 154 DIIIHIAHRISVA-HNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
D I++I + I+ + I P +S + I + L + + N R G I + I
Sbjct: 372 DSILYITNAIASLQYLVIPIRTFPASSIIIITLGLLWLCLWERNWRFFGIFFIVLGICFS 431
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ +PD+LI+ V N L S +F+ W
Sbjct: 432 TAY---KTPDILINADNVAVK-ESDNLLYSLTRKNRNFVVKTW----------------- 470
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSC 325
++ Q+ + + K L C+ ++ V + +++ I ++C
Sbjct: 471 -AKQNGQNQILNHKKYNNSDKRLKCNDYGCIYNKGNNKSVLLAYKEEDILVNC 522
Score = 37.9 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYF 52
++ A+L PP +DF +YY+ ISA G+
Sbjct: 53 GIKIGDQVKLSAKLFPPKIAPSEYAYDFARIAYYQKISATGFA 95
>gi|68171732|ref|ZP_00545084.1| ComEC/Rec2-related protein [Ehrlichia chaffeensis str. Sapulpa]
gi|88657575|ref|YP_507253.1| ComEC/Rec2-related protein [Ehrlichia chaffeensis str. Arkansas]
gi|67998843|gb|EAM85543.1| ComEC/Rec2-related protein [Ehrlichia chaffeensis str. Sapulpa]
gi|88599032|gb|ABD44501.1| ComEC/Rec2-related protein [Ehrlichia chaffeensis str. Arkansas]
Length = 674
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 62/342 (18%), Positives = 140/342 (40%), Gaps = 44/342 (12%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I + ++ F + I L P P F +F++ +++ F + M
Sbjct: 339 IDRNHNNFCSIAVASFIILLFNPESLLSP-SFQMSFAAVLALVASHNIFLRLVVM----- 392
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
++I Q F + + +++ S + +++ HF+ + G+ AN+LAIPI +
Sbjct: 393 ----------NNIVQYFSSIVLSSL--IASLATLPYVVYHFNYFSIAGVFANLLAIPITT 440
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSFVT 182
F ++P GL+ I+L I++L+ ++ ++++I+I I+ S +
Sbjct: 441 FFIMPLGLLYIVLGIVNLEFCVSWMLESTVNLLIYIVKYIAKIDGLVVLFHAFSSVSILI 500
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
I + FL + K N+R G I++ + + ++ +PD++ ++ +V ++
Sbjct: 501 ITLGFLFLCLWKGNMRFCGLILVILGFFVGISY---VTPDIMFNQHNIVVKELNGKLYAI 557
Query: 243 N-YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
N ++ SFI W + K + ++L +++
Sbjct: 558 NQKAHLTSFINLTW--------------------ARQNGQKKMLKHYSGNNQYLSCERAG 597
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLC 343
C+ + V + D + +CQ D++I + + C
Sbjct: 598 CIYN-KLGRNVLIAYNADYVMQNCQDVDLIIQAKKFMYPSEC 638
Score = 45.9 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 51/134 (38%), Gaps = 11/134 (8%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
D ++ A + PPS P +DF+ +Y+K ISA+G+ S + S S
Sbjct: 151 DNITIGDMVQFSAIIYPPSVAVSPFSYDFSRIAYFKNISAVGFAVSNICLFKKSRSRRVT 210
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKH--------FHCIPVYGLIANILAIP 120
+ I I+ + + ++ + S LI I G IA++ AI
Sbjct: 211 EY--IELIRLNIYKVLLRSLTEDSANILSALLIGKKEGIKSDIMDTIRNTG-IAHLFAIS 267
Query: 121 ILSFVVIPAGLIAI 134
L I ++
Sbjct: 268 GLHLSFIAGLFFSL 281
>gi|329114370|ref|ZP_08243132.1| ComE operon protein 3 [Acetobacter pomorum DM001]
gi|326696446|gb|EGE48125.1| ComE operon protein 3 [Acetobacter pomorum DM001]
Length = 748
Score = 168 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 52/358 (14%), Positives = 122/358 (34%), Gaps = 29/358 (8%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F + ++ ++ GY PK+ S ++ + + A
Sbjct: 400 AFQMSMAAVMALVA--GYEVLQPKLTCWRASTTGL------GHWLAWHSVVLALTSVLVG 451
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + HF I + ++AN++A+P+++ ++P GLIA+ M L +D + +M G+
Sbjct: 452 CATLPVAMAHFGVIQPFFVVANMVAVPLMAVWIMPLGLIALAFMPLHMDVLFLWLMGVGI 511
Query: 154 DIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
II +AH ++ + +P + +++ + + R G + + ++
Sbjct: 512 RPIIWLAHMVAHWPAARVVVPHMPGWGLLAVMLGLCWICLWRQRWRWAGCAGLVLGMVSP 571
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISN-YSNPPSFIFSQWKSALITPFHEAPHVQK 271
+ PD++IS G LV + + + + S + W P P +
Sbjct: 572 WLL---VQPDVIISPDGGLVGVRESDKIYVMGQSRAARPVMQAWGQYFAQPVGIFPP--E 626
Query: 272 EDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL 331
+ + + E ++ + C +D++
Sbjct: 627 GETPDGALTCGAENTPDTCVALLHGQDVVVRRQDASDGRLLLPI-------DICTGADVV 679
Query: 332 ITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
I ++ + N + + + G+ I + N + PW
Sbjct: 680 I-SVAPLRASCLNAPIRLDRFSAWENGAEAIFLHKSGN------VVRTDRAWRGQRPW 730
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 28/233 (12%), Positives = 79/233 (33%), Gaps = 16/233 (6%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ L PP P PG D F +++ + G +++ ++ H W
Sbjct: 185 LRVGDHLRVKVLLQPPPFPVLPGARDRQFEAWFANQAGSGRALGFVQLVVLAQGHKLQLW 244
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGLIANILAIPILS 123
++++ I + + A+ L+ + +A++LA+ L
Sbjct: 245 --FENLRERINARIHTILPGPEGSVAATVLVGASETVEKQLREDFAASGLAHLLAVAGLH 302
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH-IAHRISVAHNEFCIGRIPETSFVT 182
++ ++A ++L+ + W + A + + + +P +
Sbjct: 303 LGIVMGLVMAASRLLLATTEY--TALRWPCKALAAFCAWGVGLVYVLLTGAHLPAQRSLL 360
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
+ +L V + M G+ + + + ++ + ++ A++
Sbjct: 361 MAAVAVLGVAAGRRV----VSMRGLAVAACVLVLWMPQVVMGVAFQMSMAAVM 409
>gi|73667202|ref|YP_303218.1| ComEC/Rec2-related protein [Ehrlichia canis str. Jake]
gi|72394343|gb|AAZ68620.1| ComEC/Rec2-related protein [Ehrlichia canis str. Jake]
Length = 672
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 69/342 (20%), Positives = 139/342 (40%), Gaps = 43/342 (12%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I + ++ F + I L P P F +F++ I++ F+ +
Sbjct: 336 IDRSHNSFCSIAIASFIILLFTPESLLSP-SFQMSFAAVLALIASRNIFFKL-------- 386
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
I++I Q FL+ I +++ + +++ HF+ + G+ AN+LAIPI +
Sbjct: 387 -------VVINNILQYFLSIIVSSL--IAGLATLPYVVYHFNYFSIAGVFANLLAIPITT 437
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVT 182
F+++P GL I+L +++L+ ++ + ++I++ IS + TS +
Sbjct: 438 FLIMPLGLFYIILGVVNLEYYVSWMIESAVGLLIYVVQYISGMNKLVLLFHAFSSTSILI 497
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
I FL + N+R G I++ + + +PD++I++ +V +D
Sbjct: 498 ITFGFLFLCLWNGNLRFCGLILVACGFFVGVNY---VTPDIMINQHNVVVKELDNKLYAI 554
Query: 243 N-YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
N ++ SFI W Q + LK LR+ Q C K
Sbjct: 555 NQKAHLTSFINLTWAK-----------------QNGQREMLKHPLRNNQC--LSCKKGEG 595
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLC 343
C+ + V + + + +C D++I + + C
Sbjct: 596 CIY-SKFGKKVLIAYNANYVLRNCINVDLVIQGKKFVYPHEC 636
Score = 41.7 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYS 54
I+ A + PPS +DF+F SY+K ISA+G+ S
Sbjct: 150 ITIGDKIKFSAVVYPPSMSVSQFSYDFSFVSYFKNISAVGFAVS 193
>gi|258541858|ref|YP_003187291.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-01]
gi|256632936|dbj|BAH98911.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-01]
gi|256635993|dbj|BAI01962.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-03]
gi|256639048|dbj|BAI05010.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-07]
gi|256642102|dbj|BAI08057.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-22]
gi|256645157|dbj|BAI11105.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-26]
gi|256648212|dbj|BAI14153.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-32]
gi|256651265|dbj|BAI17199.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256654256|dbj|BAI20183.1| DNA translocation competence protein ComA/ComEC/Rec2 [Acetobacter
pasteurianus IFO 3283-12]
Length = 732
Score = 167 bits (422), Expect = 3e-39, Method: Composition-based stats.
Identities = 57/358 (15%), Positives = 126/358 (35%), Gaps = 29/358 (8%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F + ++ ++ GY PK+ S + ++ + A
Sbjct: 384 AFQMSMAAVMALVA--GYEVLQPKLTRWRASTTGF------GHWLAWHGAVLALTSVLAG 435
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + HF I + ++AN++A+P+++ ++P GL+A+ M L +D +M G+
Sbjct: 436 CATLPVAMAHFGVIQPFFVVANMVAVPLMAVWIMPLGLLAVGFMPLHMDAPFLWLMGAGI 495
Query: 154 DIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+I +AH ++ + +P + +++ + + + R +G + + +
Sbjct: 496 RPVIWLAHIVAHWPAARVAVPHMPGWGLLAVMLGLNWICLWRQHWRWVGCAGLVLGMASP 555
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISN-YSNPPSFIFSQWKSALITPFHEAPHVQK 271
+ PD++IS G LV + D + S I W P P
Sbjct: 556 WLL---VQPDVVISPDGGLVGVRDSGKVYVIGQSRAQRPIMQAWGQYFAQPVEVFP---- 608
Query: 272 EDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL 331
+ + P + + + V R D R+ + C +D++
Sbjct: 609 --PEGETPGGALTCGAEDTPDTCVALLRGQDVVVRRQD---TSDGRELLPADICAGADVV 663
Query: 332 ITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
I+T + NV + + + G+ + + N + PW
Sbjct: 664 ISTAPLRAS-CPNVPIRLDRFSAWENGAEAVFVHQSKN------VVRTDRAWRGQRPW 714
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 35/259 (13%), Positives = 82/259 (31%), Gaps = 13/259 (5%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYS-IPKMIYSSESHNTW 68
P + A L PP PA PG D F +++ + G + + H
Sbjct: 165 PLQVGDQLRVKALLQPPPFPALPGARDRQFEAWFANQAGSGRALGHVQLVTMGQTGHGHK 224
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGLIANILAIPI 121
++++ I + A+ L+ + +A++LA+
Sbjct: 225 LQLWFENLRERINTRIHTILPGSKGGVAATVLVGASETVEKQVREDFAASGLAHLLAVAG 284
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI-AHRISVAHNEFCIGRIPET-S 179
L ++ ++A ++L+ + + W + + A + + + +P S
Sbjct: 285 LHLGIVMGLVMAASRLLLA--ATEYTALRWSCKALAALCAWSVGLVYVLLTGAHLPAQRS 342
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF-TFPYSFSPDLLISEKGNLVALVDKN 238
V L + + + G M +++ + + ++ LVA +
Sbjct: 343 LFMAAVAVLGIAAGRRVVSMRGLAMAACVLVLCMPQVVMGVAFQMSMAAVMALVAGYEVL 402
Query: 239 TLISNYSNPPSFIFSQWKS 257
+ F W +
Sbjct: 403 QPKLTRWRASTTGFGHWLA 421
>gi|146279123|ref|YP_001169282.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides ATCC 17025]
gi|145557364|gb|ABP71977.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides ATCC 17025]
Length = 671
Score = 165 bits (418), Expect = 8e-39, Method: Composition-based stats.
Identities = 54/347 (15%), Positives = 112/347 (32%), Gaps = 38/347 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ I + +S +++ G
Sbjct: 356 GFQMSFAATAGLIWGFNALRE------------RVHPRTMSRFVAPVFLLFVSSV--IGG 401
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + HF+ I YGL+ N++A+P++ +V+PA +A LL M G
Sbjct: 402 VTTGPYAAAHFNRIATYGLMGNLIAVPMMELLVMPAAGVAALLAPFGASFPALWAMELGA 461
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVT-IVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
I+ +AH ++ P + + + L ++ + RH G + + ++
Sbjct: 462 RWILWVAHWVAALPGSVGAVASPGPWVLPILTLGGLWLMLWRGRARHAGLVGMAGAFLL- 520
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ + P LL+S G LV L+ + + F W
Sbjct: 521 --WAQADRPPLLVSSDGALVGLLGPEGRALSSARGGGFAARSWLE------------NDG 566
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
DL ++ ++ + + + + V D I +C + ++I
Sbjct: 567 DLADQPAAAARPGFDGPRGARRFSMAGIEGVALKGKGA-------ADRIPEACATAQLVI 619
Query: 333 TTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIK 379
R + LI +L + G+L I + +
Sbjct: 620 LAARHEGP-VPPGCQLIDQSVLARTGALAIWPGAEGLRMVPARADRR 665
Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/205 (17%), Positives = 78/205 (38%), Gaps = 6/205 (2%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
+ L P PA PG FDF +++ + A+GY + M+ + S ++ +
Sbjct: 145 PGMVVMMTGHLDAPLPPAEPGGFDFRRMAFFDRLGAVGYTRTPVVMLEPAASGDSLVNRL 204
Query: 73 ISSIKQSFLNEIRANIGTYGSASA----SIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
+++ + G + +A + + + GL A+ILAI L+ ++
Sbjct: 205 RVAVRIGVQDRFPGEAGAFSAAVLTGDYAGISAATMEDLRLSGL-AHILAISGLNMSLLA 263
Query: 129 AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL 188
+ ++ L+L P + I +A + + G +P ++ L
Sbjct: 264 GFVFGLVRHGLAL-VPPLALRLPTKKIAACVAFLATGFYLLMSGGNVPTLRAFVMIAVML 322
Query: 189 LMVFCKTNIRHIGSIMIGITIIILF 213
+ + S + ++I+L+
Sbjct: 323 AAILADRRALSMRSFALAASVILLW 347
>gi|149914773|ref|ZP_01903303.1| N-acetyl-gamma-glutamyl-phosphate reductase [Roseobacter sp.
AzwK-3b]
gi|149811566|gb|EDM71401.1| N-acetyl-gamma-glutamyl-phosphate reductase [Roseobacter sp.
AzwK-3b]
Length = 680
Score = 165 bits (418), Expect = 9e-39, Method: Composition-based stats.
Identities = 56/350 (16%), Positives = 120/350 (34%), Gaps = 50/350 (14%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ ++ G+ + W +S + SF+ I
Sbjct: 364 GFQMSFAATTALVAGYGWL-----KDHDVPLGPRWMRGAVSVLVSSFVAGI--------- 409
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + HF+ +GLIAN++++P++ +V+PA ++A LM L+ + VM GL
Sbjct: 410 -ATAPIAAAHFNQFAHFGLIANLMSVPLMGVMVMPAAVVAACLMPFGLEWLALWVMGLGL 468
Query: 154 DIIIHIAHRISVAHNEFCIGRIPET-SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
D I+ +AH ++ P + V L ++ + R G + ++
Sbjct: 469 DWILWVAHWVAGWPGARGTVVSPGPLVLPLMAVGVLFVMLWRGWGRLAGLAPV---LVSG 525
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ + P +LI++ G LV ++ + FI W +A +
Sbjct: 526 VLWLGAERPQVLIADSGALVGVMTPEGRALSREKGAGFIAQNWLENDGDAADQAAAHARW 585
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
+ L + +R C+ D L+
Sbjct: 586 SQVMPGEIRL----------------------------LAVHGRRAVDSLRDCEGHDWLV 617
Query: 333 TTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAI 382
++ C ++ P L++ G++ + + I + +
Sbjct: 618 LSVEPDRALPCQ---VVHPGTLRETGAMALRTGRDGVRVVTAREITGARL 664
Score = 40.2 bits (92), Expect = 0.59, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 53/136 (38%), Gaps = 12/136 (8%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
+ A LSPP GP PG FDF +++ + A+GY + P + + W +K
Sbjct: 153 APGAWVMMTAHLSPPGGPVEPGGFDFQRHAWFLRLGAVGYTRT-PVVGLAPPEGGLWMFK 211
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSF 124
++ I+A + A AS + I L +A++LAI L
Sbjct: 212 ARMAMS----ARIQAALPGETGAFASAIMTGDRSGIGQEALTALRVTNLAHLLAISGLHM 267
Query: 125 VVIPAGLIAILLMILS 140
++ + + +
Sbjct: 268 GLLAGFVFGAFRLGFA 283
>gi|163746570|ref|ZP_02153928.1| competence protein, putative [Oceanibulbus indolifex HEL-45]
gi|161380455|gb|EDQ04866.1| competence protein, putative [Oceanibulbus indolifex HEL-45]
Length = 522
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 66/390 (16%), Positives = 144/390 (36%), Gaps = 58/390 (14%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L I ++ A I P PG F +F++ ++ G+
Sbjct: 181 LMIGRRAISLRAVGVAGIIVLALRPEALMGPG-FQMSFAATTALVAVFGW---------- 229
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + I + + ++ + + HF+ + YGL+AN+L++P+
Sbjct: 230 ---MRDFEGEVIPRRLRPVAAVVISSAV--AGFATAPISAAHFNTVSHYGLVANLLSVPL 284
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ +VIPA ++A+L+ L+ IP M GL I+ +A +S P +
Sbjct: 285 MGVLVIPAAVLAVLIAPFGLEGIPLWAMGLGLRWILFVAEGVSNLPGARSFVPGPGGWVL 344
Query: 182 T-IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ + FL ++ + ++R +G ++ +++I+ + + PD+L+++ G LV ++
Sbjct: 345 PLLALGFLWLLIWQGSLRWLGCPVMVLSLIV---WQATTRPDVLVADTGTLVGIMTAEGR 401
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ FI W D ++ ++ + + +
Sbjct: 402 ALSREKGAGFIARNWLE------------NDGDGVNQSVAAARWVKNTT----------- 438
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
+I KR C+ +I+I +++ N + P L++ G+L
Sbjct: 439 --------GIIHLSGKRAVAAFRDCRRGEIVIASVQMEPDPAWN-CRVFDPIQLRETGAL 489
Query: 361 EITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
+ +P K I + W
Sbjct: 490 ALWKMP------KGWHITTAKEHAGARLWN 513
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/231 (20%), Positives = 88/231 (38%), Gaps = 14/231 (6%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+ A LSPP+GP PG FDF +++ G+ A+GY +P + + + + +
Sbjct: 2 RVMTTAHLSPPAGPVEPGGFDFQRHAWFAGLGAVGYAR-VPLLGIAKPTEGELS-LLLFR 59
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFVVIP 128
++ + +R ++ A+ I L +A++LAI L ++
Sbjct: 60 LRMAASARVRHHLPGDIGGFAAAITTGDRSAISQQALQDLRSSNLAHLLAISGLHMGLLS 119
Query: 129 AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR--IPETSFVTIVVE 186
A + + L +IL+L P W I A I+ G E ++V V
Sbjct: 120 AVVFSGLRLILALH--PVTATRWPSRSIAAGAALIAATGYLALSGGNVATERAYVMCAVA 177
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIILFTFP-YSFSPDLLISEKGNLVALVD 236
++ + I + GI ++ L + + LVA+
Sbjct: 178 LCALMIGRRAISLRAVGVAGIIVLALRPEALMGPGFQMSFAATTALVAVFG 228
>gi|94496456|ref|ZP_01303033.1| ComEC/Rec2-related protein [Sphingomonas sp. SKA58]
gi|94424202|gb|EAT09226.1| ComEC/Rec2-related protein [Sphingomonas sp. SKA58]
Length = 695
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 60/333 (18%), Positives = 132/333 (39%), Gaps = 24/333 (7%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIY-SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+F + ++AI P+ ++ W+WK ++ + + +
Sbjct: 357 SFQMSFAAVTAIVALAEHPRFRAFAAAREENWSWKLTRALAVTLATGLVVELVLM----- 411
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ HFH + G AN++AIP+ +FVV+P ++A+L ++ L + + LD++
Sbjct: 412 -PIALFHFHKAGLLGAFANLIAIPLTTFVVMPLEVLALLFDLVGLGAPFWWLTGHALDLL 470
Query: 157 IHIAHRISVAHNEFCI-GRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+ +AH ++ + + + F ++V L + +T R +G + + +
Sbjct: 471 LAVAHGVAASPLATLLAPAMRPVLFALVIVGLLWCLLWRTRWRWLGLPPVLV---GVALV 527
Query: 216 PYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQ 275
+ PDLL++ G VA+ + + ++ + +E DL
Sbjct: 528 LVAAPPDLLVTGDGRHVAVRSGSGMAILRDRAGDYVRDTLSES---AGYEGDLSAIADLP 584
Query: 276 EKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTI 335
S+ L P +++ + RSD+++ + +C +DI+I+
Sbjct: 585 MARCSTDLCALDMHDPAG-----RTWRLLLTRSDMLI----DRPAFAPACARADIVISDR 635
Query: 336 RDINTKLCNVSLLITPEILQKQGSLEITIIPPS 368
R L I ++L + G L I++
Sbjct: 636 RL-PLWCRPRWLRIDRQLLARTGGLSISLEEGE 667
Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 6/154 (3%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
I RL PP+ P PG +DF +Y++GI A G +++ + +
Sbjct: 151 GAVIRFRTRLMPPAPPGVPGAYDFAARAYFQGIGATGKALRPIRVLAPTRETPPLRARLF 210
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
+ I + + GL A++L+I L + I
Sbjct: 211 AHIVDQVEGPAEGIAAALATGDQGAISDADAEAMRRSGL-AHLLSISGLHVTALIGAAIF 269
Query: 134 ILLMILSLD-----NIPFGVMAWGLDIIIHIAHR 162
+L+ +++L + P ++A G ++ I +
Sbjct: 270 LLMRVMALSRRAALDWPLMLIAAGGGALVGIGYT 303
>gi|254500339|ref|ZP_05112490.1| Competence protein [Labrenzia alexandrii DFL-11]
gi|222436410|gb|EEE43089.1| Competence protein [Labrenzia alexandrii DFL-11]
Length = 801
Score = 158 bits (400), Expect = 1e-36, Method: Composition-based stats.
Identities = 72/357 (20%), Positives = 131/357 (36%), Gaps = 24/357 (6%)
Query: 23 LSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY---SSESHNTWTWKKISSIKQS 79
L P +PG F +F++ ++ + S K S + W
Sbjct: 389 LLAPERLFYPG-FQMSFAAVIALVAVYDLWRSHQKRRRIFIPSANGPFWFLSGALKWATG 447
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
+ I HF I +GL+ N+L +P+ S +V+P G++A++LM
Sbjct: 448 LF-----VTALVAGIATGIVGAYHFSRIAPFGLVGNMLGMPVFSIIVMPMGVVALVLMPF 502
Query: 140 SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSFVTIVVEFLLMVFCKTNIR 198
L IP +M+ GL ++I IA +F +G + S ++ FL ++ R
Sbjct: 503 GLAAIPLKIMSAGLAVLIRIAEFTEQIAPDFGRMGSLTGLSAAVLLAGFLGLLLAPGRFR 562
Query: 199 HIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSA 258
I +G+ I + S PD+ I G +A D + S SF W
Sbjct: 563 ---MICLGLASIGIALAIISRPPDIYIPATGPQLAARDFEGSLQMSSARSSFSVETWFER 619
Query: 259 LITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRK 318
+ +D Q S + VG + + + K +
Sbjct: 620 EGVSAEAIKSRKMKDDQRSCDPSGCVVRAFAARGV---------VGVEHVPIHIALPKTR 670
Query: 319 DMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVK 375
D CQ +D+++T + + ++C + + EI + +G++ I + K
Sbjct: 671 DAFFYDCQKADMIVTDM--VAPEVCRAAEVFDREIRKARGAVSIWLEQVCRTGSPTK 725
Score = 94.5 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 88/243 (36%), Gaps = 22/243 (9%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY-SSESHNTW 68
I+ ARL PP GP PG +DF+F +Y+ GI A G+ Y P+++ + S
Sbjct: 179 GIAPGDWIKVRARLFPPMGPVVPGGYDFSFRAYFDGIGASGFSYGAPEIVQGPAPSQVLL 238
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASI-FLIKHFHCIPV-------YGLIANILAIP 120
+ ++ ++Q I A + + ++ L+ I +A+ILAI
Sbjct: 239 LVRHVNGLRQHLAARISALLPEGPETALAVALLVGDRGGIDEKTEESLRAAGLAHILAIS 298
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
L + G A+ L L+L + L IH + + S
Sbjct: 299 GLHMALFAGGAYAVCLGTLAL------IPGLALRWPIHKVSAVLALVAAAFYLLLSGASV 352
Query: 181 VT----IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP---YSFSPDLLISEKGNLVA 233
T I++ + + + + +L P + + + LVA
Sbjct: 353 ATQRSFIMIALVFLGIMTGRRGLTLRSVAIAGLFLLLLAPERLFYPGFQMSFAAVIALVA 412
Query: 234 LVD 236
+ D
Sbjct: 413 VYD 415
>gi|46201588|ref|ZP_00208160.1| COG0658: Predicted membrane metal-binding protein [Magnetospirillum
magnetotacticum MS-1]
Length = 710
Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats.
Identities = 38/215 (17%), Positives = 91/215 (42%), Gaps = 12/215 (5%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ I+A Y P+ +H W +++I + +
Sbjct: 363 SFQMSFAAVVAMIAA--YESLTPRQTQWRAAHPGW----LAAIGLYVFGTVVTTL--IAG 414
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +++ I HF+ V+ + AN++A+P+ F V+P L+ LL+ L+ + M WG+
Sbjct: 415 FATAVYGIYHFNRFAVWSVAANMIAVPLTGFWVMPWALVMFLLLPFGLEALALVPMGWGV 474
Query: 154 DIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+ + +A ++ + + +P + V + + + R G + + + +
Sbjct: 475 EGVNWVAVWVASWPSSAVTLPILPLWAMVVFTLGGCWLCLWRGRWRWWGLVPMMAALASM 534
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNP 247
++ PDLL+ +G+ +A+ + +
Sbjct: 535 ---AFARPPDLLVDGRGDGMAVRSADGTLLLNGKG 566
Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 42/230 (18%), Positives = 79/230 (34%), Gaps = 26/230 (11%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW-- 70
+ A L PP PA PG FDF ++++ AIG P + + W
Sbjct: 146 VGDRVRVRAMLMPPPQPAMPGAFDFARFAWFRQFGAIGTALG-PVEVTEPGAATGWRADL 204
Query: 71 -KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPIL 122
I+ I+ + I A + A + I + +A+IL+I L
Sbjct: 205 TTTINEIRHAITTRIMAVLPGDRGAVTAALTTGDQMPISAPMMQAYRDSGLAHILSISGL 264
Query: 123 SFVVIPAGLIAI----LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
+ + AGL+ + LL + L + + + W + I A ++ +
Sbjct: 265 H-ITMAAGLVFVGLRTLLALFPLVALRYPIKKWAAALAIVFAGFYTLLAGSPVPAQRS-- 321
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEK 228
+ +L+ R + ++ + + + PD LI
Sbjct: 322 ---FFMTGLVLLAVLLDR-RALSMRLVAWAAVAILLW----QPDELIGPS 363
>gi|163854078|ref|YP_001642121.1| ComEC/Rec2-related protein [Methylobacterium extorquens PA1]
gi|163665683|gb|ABY33050.1| ComEC/Rec2-related protein [Methylobacterium extorquens PA1]
Length = 752
Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 57/359 (15%), Positives = 115/359 (32%), Gaps = 39/359 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + I+ SS + ++ + + A +
Sbjct: 397 SFQMSFGAVAGLIACAPLIDGRVFRTDSSSRIARSAFWVAKAVVGTLATTLVAQL----- 451
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + F HF + +GL+ N L +P++S V+PA ++ +L +LD + +M +
Sbjct: 452 -ATAPFATYHFQTVQPFGLVGNALTLPLVSLAVMPAAVLGMLAYPFALDRPVWWLMGLAV 510
Query: 154 DIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
++ I+ I+ + + + + LL + +R + + G+ + +
Sbjct: 511 RGMLDISAWIAGFGQANVVLPAFGTGALMLLAAALLLATLPVSRLRFLALVPAGLGVALA 570
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ D+ I G A+ K+ + PP F+ QW A
Sbjct: 571 ASPIRY---DIYIDRDGAGAAVRGKDGRLVVLGRPPGFVLEQWLKADGDGRPPEAATGAA 627
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
+ + C V ++ K C +DILI
Sbjct: 628 GPR---------------------CDRIGCTLTAVDGRAVALVMDKRAFAEDCARADILI 666
Query: 333 TTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
T R C L+ L +G+ I + + I+ + PW
Sbjct: 667 T--RLRAPPGCAAPLIADRTFLAVRGATAIRLGTEGPE------IVTARGAGQPKPWQP 717
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 70/198 (35%), Gaps = 17/198 (8%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE-- 63
+ I ARL PP PG +DF +Y++GI A+G ++ +E
Sbjct: 173 RAAQAVRPGDAIRATARLLPPPEAVRPGGYDFARDAYFRGIGAVGSLVGKVEVASPAEPL 232
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANI 116
+ + I + + +F I IG A A+ + I I ++
Sbjct: 233 ALSLRLTAAIDAARNAFTRRITDAIGGQAGAVAAALVTGKRGLISNETNDVLRAAGIYHV 292
Query: 117 LAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD------IIIHIAHRISVAHNEF 170
++I L V+ + ++ L +P +AW + ++ + + + +
Sbjct: 293 VSISGLHMVLAAGVVFWLVRA--GLALVPVLALAWPIKKIAAGTAMLAVTAYCAFSGWDV 350
Query: 171 CIGRIPETSFVTIVVEFL 188
R + V + +
Sbjct: 351 AAERALIMTLVMLGAILV 368
>gi|89054334|ref|YP_509785.1| ComEC/Rec2-related protein [Jannaschia sp. CCS1]
gi|88863883|gb|ABD54760.1| ComEC/Rec2-related protein [Jannaschia sp. CCS1]
Length = 706
Score = 157 bits (396), Expect = 3e-36, Method: Composition-based stats.
Identities = 64/347 (18%), Positives = 123/347 (35%), Gaps = 22/347 (6%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + +A+ ++ + + W + + S + A+ +
Sbjct: 363 FQMSFAATTALVAAFTGLQGAEWMRNWPKWVKGAWALLTSSVIA----------GAATAP 412
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F HF+ + VYGLIAN+L +P + VVIP ++A++L L + F +M L+ I+
Sbjct: 413 FAAAHFNRLAVYGLIANLLTVPAMGSVVIPFAVLALMLAPFGLSWVAFWIMELALEWILA 472
Query: 159 IAHRISVAHNEF-CIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+A R++ + P I V + + R I + +I+ + +
Sbjct: 473 VAARVADIPGAVRMVASPPHLVLPLIGVGGIALCIWSGRGRWIALTPMAAGLIL---WQW 529
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEK 277
+ P LLISE G LV L + F+ W + + +
Sbjct: 530 AERPMLLISEPGGLVGLTTDQGRALSRPRGDGFVAGIWLENDGDLITQEDAAARPAWADA 589
Query: 278 NQSSLKEILR-SMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKD-------MIRLSCQLSD 329
+ ++ ++ + C R D++V L +D R +
Sbjct: 590 DPGRTTQLGEVTLWHGTGRAASRVVDAACARHDIVVTNLAPEDPSATLTQAERDTRARLT 649
Query: 330 ILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKF 376
N LL+TP +L GS+ ++ + D +
Sbjct: 650 APPPATGAANAATATPCLLLTPRVLSATGSIALSAQDGALQIDTARA 696
Score = 60.2 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 50/253 (19%), Positives = 87/253 (34%), Gaps = 16/253 (6%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
I LSPP G A PG FDF ++++ I +GY + ++
Sbjct: 151 PGAIIFTTGHLSPPGGAAEPGGFDFQRHAWFQSIGGVGYTRTPVLLLEPPAD----GVAP 206
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFV 125
+ +++ ++A I A A+ L + IA++LAI L
Sbjct: 207 LFTLRMRMSAAVQAQIPGQPGAFAAAVLTGDRSGLSQGSTQDMRDSNIAHLLAISGLHMG 266
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVA-HNEFCIGRIPETSFVTIV 184
++ + A L L+L IP + + + +A +S A + G + V
Sbjct: 267 LLTGFVYAALRTALAL--IPAIALRYPIRKWAAVAALVSGAFYLALSGGNVATERAFIQV 324
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP--DLLISEKGNLVALVDKNTLIS 242
V + S+ I I++L SP + + LVA
Sbjct: 325 AVMFTAVLLDRRAITLRSVAIAAIIVLLHRPETLMSPGFQMSFAATTALVAAFTGLQGAE 384
Query: 243 NYSNPPSFIFSQW 255
N P ++ W
Sbjct: 385 WMRNWPKWVKGAW 397
>gi|126731369|ref|ZP_01747176.1| competence protein [Sagittula stellata E-37]
gi|126708280|gb|EBA07339.1| competence protein [Sagittula stellata E-37]
Length = 686
Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats.
Identities = 67/331 (20%), Positives = 119/331 (35%), Gaps = 37/331 (11%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + +A+ + + W +S S + A+ +
Sbjct: 358 FQMSFAATTALVAVFERLSAARAGRKWPGWLGPVLSVFVSSAVA----------GAATAP 407
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
+ HF+ VYGL+AN++++P++ VV+P G++A LLM L LD I VMA GLD I+
Sbjct: 408 VGMAHFNQASVYGLLANLVSVPVMGVVVVPLGVVAGLLMPLGLDWIALHVMALGLDWILW 467
Query: 159 IAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+A +S + P TI L++ + R G I + + + + +
Sbjct: 468 VARAVSDWPGSVRPVVAPPPVVLPTIAAGGLVLCLWRGRARLAGLIPVAVAVAL---WSQ 524
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEK 277
+ PD+LI++ G+LV ++ + FI W D +
Sbjct: 525 TQRPDVLIADNGSLVGIMTPQGRGLSRDQGAGFIADNWLE--------------NDGRGG 570
Query: 278 NQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRD 337
Q +F + H KR + C I++ ++
Sbjct: 571 TQDDAARRWPGTHRNRFAQADSTVGQVIHVQG------KRAARLLTRCVSDQIVVASVDI 624
Query: 338 INTKLCNVSLLITPEILQKQGSLEITIIPPS 368
C + P L GS+ + P
Sbjct: 625 AIDGTCR---VFDPVTLGATGSVALWSTPGG 652
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 8/136 (5%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
T+ L PP G PG FDF ++++ I A+GY + P ++ +
Sbjct: 143 PGMTVILTGHLGPPGGAVEPGGFDFRRHAWFQQIGAVGYTRT-PVLMLEPPPRGFASGLT 201
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFV 125
++ + + +++ + A A+ + + L +A++LAI L
Sbjct: 202 VTRARMALSAHVQSVLEGETGAFAAAIMTGDRAGMGADTLQDLRDTNLAHLLAISGLHMG 261
Query: 126 VIPAGLIAILLMILSL 141
++ + L + L L
Sbjct: 262 LLAGFVFGTLRLALLL 277
>gi|170738988|ref|YP_001767643.1| ComEC/Rec2-related protein [Methylobacterium sp. 4-46]
gi|168193262|gb|ACA15209.1| ComEC/Rec2-related protein [Methylobacterium sp. 4-46]
Length = 738
Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats.
Identities = 56/332 (16%), Positives = 120/332 (36%), Gaps = 29/332 (8%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + + + + ++ + + + + + + +
Sbjct: 397 SFQMSFAAVAGLVACARLLDGRLFAAPGAGPLGRALAWVAGTLVGTLATTLV--AQVATA 454
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F HF I +G++ N L +P++S VV+PA ++ +L +LD + M + ++
Sbjct: 455 PFATYHFQNIQPFGVVGNALTLPLVSVVVMPAAVLGMLAYPFTLDRPVWWTMGLAVRGML 514
Query: 158 HIAHRISVA-HNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
I+ I+ H + + + LL+ +R +G + ++ +
Sbjct: 515 DISAWIAGFDHAVVIVPAFGAGALGLLTAALLLLTLPSPRLRVLGVLP---ALVGVALAA 571
Query: 217 YSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQE 276
+ PDL + +G AL + +++ PP+F QW A D +
Sbjct: 572 RAERPDLYVDREGAGAALRGADGRLASLGRPPAFGLEQWLRA------------DGDARP 619
Query: 277 KNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIR 336
+ SL R CV R+ V +++ K C +DI+I R
Sbjct: 620 RGDPSLARAER---------CDAVGCVATARNGWRVALVRDKRAFEADCARADIVIA--R 668
Query: 337 DINTKLCNVSLLITPEILQKQGSLEITIIPPS 368
C L++ L G+ + P
Sbjct: 669 ATAPPGCAARLVLDRAFLAAHGATTVRFAPEG 700
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+K P IE ARL PP PA PG +DF +Y++GI A+G + +
Sbjct: 173 RKAAPLRPGDFIEAKARLLPPPEPARPGGYDFARDAYFRGIGAVGSLLGA-IAVREPPAP 231
Query: 66 NTWTWKKISSIKQS 79
+ + ++I +
Sbjct: 232 PPLSLRVAAAIDDA 245
>gi|254564049|ref|YP_003071144.1| hypothetical protein METDI5735 [Methylobacterium extorquens DM4]
gi|254271327|emb|CAX27339.1| conserved membrane protein of unknown function; ComEC/Rec2 family
domain [Methylobacterium extorquens DM4]
Length = 752
Score = 156 bits (394), Expect = 5e-36, Method: Composition-based stats.
Identities = 56/360 (15%), Positives = 111/360 (30%), Gaps = 39/360 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + I+ SS ++ + + A +
Sbjct: 397 SFQMSFGAVAGLIACAPLIDGRVFRTDSSSRIARSASWVAKAVVGTLATTLVAQL----- 451
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + F HF + +GL+ N L +P++S V+PA ++ +L +LD + +M +
Sbjct: 452 -ATAPFATYHFQTVQPFGLVGNALTLPLVSLAVMPAAVLGMLAYPFALDRPVWWLMGLAV 510
Query: 154 DIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
++ I+ I+ + + + + LL + +R + + G+ + +
Sbjct: 511 RGMLDISAWIAGFGQANVVLPAFGTGALMLLAAALLLATLPVSRLRFLALVPAGLGVALA 570
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ D+ I G A+ K+ + P F+ QW A
Sbjct: 571 ASPIRY---DIYIDRDGAGAAVRGKDGRLVVLGRPTGFVLEQWLKADGDGRPPEAATGAA 627
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
+ + C V ++ K C +DILI
Sbjct: 628 GPR---------------------CDRIGCTLTAVDGRAVALIMDKRAFAEDCARADILI 666
Query: 333 TTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTKH 392
T R C L+ L +G+ I + I + PW
Sbjct: 667 T--RLRAPPGCAAPLIADRTFLAVRGATAIRL------GTAGPEITTARGAGQPKPWQPQ 718
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 73/198 (36%), Gaps = 17/198 (8%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE-- 63
+ I ARL PP PG +DF +Y++GI A+G ++ +E
Sbjct: 173 RAAQAVRPGDAIRATARLLPPPEAVRPGGYDFARDAYFRGIGAVGSLVGKVEVGPPAEPL 232
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANI 116
+ + I + + +F I IG A A+ + I I ++
Sbjct: 233 ALSLRLTAAIDAARNAFTRRITDAIGGQAGAVAAALVTGKRGLISNETNDVLRAAGIYHV 292
Query: 117 LAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD------IIIHIAHRISVAHNEF 170
++I L V+ + ++ +L+L +P +AW + ++ + + + +
Sbjct: 293 VSISGLHMVLAAGVVFWLVRAVLAL--VPVLALAWPIKKIAAGTAMLGVTAYCAFSGWDV 350
Query: 171 CIGRIPETSFVTIVVEFL 188
R + V + +
Sbjct: 351 AAERALIMTLVMLGAILV 368
>gi|126737890|ref|ZP_01753620.1| competence protein [Roseobacter sp. SK209-2-6]
gi|126721283|gb|EBA17987.1| competence protein [Roseobacter sp. SK209-2-6]
Length = 671
Score = 156 bits (393), Expect = 6e-36, Method: Composition-based stats.
Identities = 62/333 (18%), Positives = 121/333 (36%), Gaps = 41/333 (12%)
Query: 31 FPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGT 90
F +F++ + + P ++ I + +
Sbjct: 357 LSAGFQMSFAATTALVVTFSWLREAPAFEMPPV------------LRPPVALLISSFVA- 403
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMA 150
A+ + F HF+ + YGL+AN+LA+P++ VVIPA ++A+ L+ L L+ I +
Sbjct: 404 --GAATAPFGAAHFNLLSHYGLLANLLAVPVMGIVVIPATVLALCLLPLGLEWIALRFVE 461
Query: 151 WGLDIIIHIAHRISVAHNEFCIGRIPETSFVT-IVVEFLLMVFCKTNIRHIGSIMIGITI 209
GL I+ + ++ N + + + L + + R +G I +G+ +
Sbjct: 462 MGLSWILAVGEFVATLPNSQSSVQAANPYVLPVMSFGALFVFLWRGKARWLGGIPVGVAL 521
Query: 210 IILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHV 269
++ + P LLIS G LV ++ + + S SF S W +
Sbjct: 522 VV---WAIDQRPLLLISPTGGLVGVLQEEGRSLSRSETQSFAASNWLRRDGDDATQFQAA 578
Query: 270 QKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSD 329
Q+ ++ L+ + F KR +C D
Sbjct: 579 QRAKGPAALPGIVRFNLQKGEIVHFQG-------------------KRATKEVQTCNAGD 619
Query: 330 ILITTIRDINTKLCNVSLLITPEILQKQGSLEI 362
I ++ + C + TP+ L GS+++
Sbjct: 620 IFVSNTALKASGGCR---VFTPDELSLHGSVQM 649
Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/209 (16%), Positives = 72/209 (34%), Gaps = 14/209 (6%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ A L PP GP P FDF +++ + A+GY S ++ + W
Sbjct: 149 LAPGVRLAATAHLMPPQGPVEPFGFDFRRHAWFLRLGAVGY--SAAPIMVMKPTPANWM- 205
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILS 123
S++ +R + A ++ + L +A++LAI L
Sbjct: 206 ---QSLRWRLSEGLRNRLPGEPGAVSAAITTGDRSAVSQRTLRLLRESNLAHLLAISGLH 262
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
++ + ++ + +L F + I +V + G + +
Sbjct: 263 MGLLSGFVFSLFRFVFAL-WPAFALRYEAKKIAAACGLCAAVFYLFLSGGSVASQRAFVM 321
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
V F L + + S+ I +I++
Sbjct: 322 VAVFFLAILLNRRALSLRSVAIAAILILV 350
>gi|254475818|ref|ZP_05089204.1| competence protein [Ruegeria sp. R11]
gi|214030061|gb|EEB70896.1| competence protein [Ruegeria sp. R11]
Length = 689
Score = 156 bits (393), Expect = 8e-36, Method: Composition-based stats.
Identities = 54/332 (16%), Positives = 124/332 (37%), Gaps = 34/332 (10%)
Query: 34 LFDFNFSSYYKGISAIGYF--YSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTY 91
F +F++ I+ + +P ++ +
Sbjct: 364 GFQMSFAATTALIAVFSALQAWQLPPSLWWARGAVG-----------------VVLSSVV 406
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
+ + F HF+ + +GL+AN+LA+P++ +V+P+ ++A+ L + I M
Sbjct: 407 AGIATAPFAAAHFNQLSQFGLLANVLAVPVMGLLVVPSAVLALCLAPIGGGWIGLWGMDL 466
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFV-TIVVEFLLMVFCKTNIRHIGSIMIGITII 210
G+ I+ +A ++ +P S + I +++ + +R G+I I ++
Sbjct: 467 GIRWILWVAGWVAGMDGAVRPVEMPPPSVLGLIAFGGIMLAVWRGPLRWSGTIAICGGLL 526
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQ 270
I + + P +LIS +G LV ++ + + S F S+W T +
Sbjct: 527 I---WAQAGRPVVLISPEGGLVGVMTEQGRALSRSRGQGFAASRWAENDGTLLTQ----- 578
Query: 271 KEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDI 330
++ ++L + + + ++ V+ + + DI
Sbjct: 579 ------EDAAALWPDPAVVPDWGHTLKGRHAVLALPDGAWLIHVMGKAAHAAPIPCVPDI 632
Query: 331 LITTIRDINTKLCNVSLLITPEILQKQGSLEI 362
++ + R L ++ L+K GSL +
Sbjct: 633 ILVSDRADKLPLTGGCRVMDAITLRKTGSLAL 664
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 56/147 (38%), Gaps = 12/147 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S+ + A L PP GP P FDF ++++ + A+GY +P ++
Sbjct: 143 ISLADGVFAPAIGARVMTTAHLMPPQGPVEPRGFDFRRHAWFQKLGAVGYTR-VPVLLVE 201
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IA 114
+ + +++ + + + + A+ IP L +A
Sbjct: 202 EPGADLAIARMRAALSGAIRSRMAPETAGF----AAAITTGERADIPQAELDALRASNLA 257
Query: 115 NILAIPILSFVVIPAGLIAILLMILSL 141
++LAI L ++ + + + +L
Sbjct: 258 HLLAISGLHMGLLAGVVFGGIRLGFAL 284
>gi|260576321|ref|ZP_05844312.1| ComEC/Rec2-related protein [Rhodobacter sp. SW2]
gi|259021392|gb|EEW24697.1| ComEC/Rec2-related protein [Rhodobacter sp. SW2]
Length = 704
Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats.
Identities = 57/357 (15%), Positives = 121/357 (33%), Gaps = 46/357 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ ++ G ++ + +++
Sbjct: 377 GFQMSFAATTALVAGFGALEG------------GVLHGRVPRWFLPVFTLVLSSL--LAG 422
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + + F+ I YG AN+L +P++ VV+PAG IA LL + L ++P VM G
Sbjct: 423 LATAPYGAATFNRIADYGFFANLLTVPVMGAVVMPAGAIAALLAPIGLQDLPLWVMGRGS 482
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFV-TIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
I+ ++ I+ +P + I + L ++ + +R G + + + +++
Sbjct: 483 AWILWVSFWIAGMEGSVTAVPVPGPWVIPLITLGGLWLILWRGWLRGAGLVPMALALVL- 541
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ PD LIS G LV L+ + F W
Sbjct: 542 --WAGVQRPDALISADGGLVGLMGPEGRAVSSPRGAGFAAKSWLE--------------- 584
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVG-VLKRKDMIRLSCQLSDIL 331
+ L E + + + F K + +V + +C +D++
Sbjct: 585 -----DDGDLAEQVDAAERAGFSGDKGARSFVLGPWRAVVLKGKAAAGAVPAACAGADLV 639
Query: 332 ITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFP 388
+ + C +I +L G L + + + + + + L P
Sbjct: 640 VVAAEVAAPEGCE---VIDQTLLSASGGLALWLTDEGS----ITLQPAFSAKRLWSP 689
Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats.
Identities = 42/246 (17%), Positives = 85/246 (34%), Gaps = 14/246 (5%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
+ L PP GP PG FDF +++ + AIGY S ++ ++
Sbjct: 166 PGQVVMLTGMLGPPEGPVEPGGFDFQRMAWFDRLGAIGYTASPVLLLERPAD----GEQR 221
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFV 125
I+ + N I A + A +S + + + + +A++LAI ++
Sbjct: 222 INRWRTRLSNAIMAEVPGDAGAFSSGVMTGDRSGLSLEAVVDLRKSSLAHLLAISGMNMA 281
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
+ A + A++ L+L + + +A ++ + + + VV
Sbjct: 282 FLTAFVFALVRYGLAL-LPVLALRLNSKKLAAVVALGVAWVYLQLSGANVATERAFVTVV 340
Query: 186 EFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP--DLLISEKGNLVALVDKNTLISN 243
L V + S+ I +++L P + + LVA
Sbjct: 341 VMLGAVLFDRRALSLRSVAISAVVLLLLQPESLLEPGFQMSFAATTALVAGFGALEGGVL 400
Query: 244 YSNPPS 249
+ P
Sbjct: 401 HGRVPR 406
>gi|218533023|ref|YP_002423839.1| ComEC/Rec2-related protein [Methylobacterium chloromethanicum CM4]
gi|218525326|gb|ACK85911.1| ComEC/Rec2-related protein [Methylobacterium chloromethanicum CM4]
Length = 752
Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats.
Identities = 58/360 (16%), Positives = 113/360 (31%), Gaps = 39/360 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + I+ SS ++ + + A +
Sbjct: 397 SFQMSFGAVAGLIACAPLIDGRVFRTDSSSRIARSASWVAKAVVGTLATTLVAQL----- 451
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + F HF + +GL+ N L +P++S V+PA ++ +L +LD + +M +
Sbjct: 452 -ATAPFATYHFQTVQPFGLVGNALTLPLVSLAVMPAAVLGMLAYPFALDRPVWWLMGLAV 510
Query: 154 DIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
++ I+ I+ + + + + LL + +R + + G+ + +
Sbjct: 511 RGMLDISAWIAGFGQANVVLPAFGTGALMLLAAALLLATLPVSRLRLLALVPAGLGVALA 570
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ D+ I G A+ K+ + PPSF+ QW A
Sbjct: 571 ASPIRY---DIYIDRDGAGAAVRGKDGRLVVLGRPPSFMLEQWLKADGDGRPPEAATGAA 627
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
+ + C V ++ K C +DILI
Sbjct: 628 GPR---------------------CDRIGCTLTAVDGRAVALVMDKRAFAEDCARADILI 666
Query: 333 TTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTKH 392
T R C L+ L +G+ I + I + PW
Sbjct: 667 T--RLRAPPGCAAPLIADRTFLAVRGATAIRL------GTAGPEITTARGAGQPKPWQPQ 718
Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 34/197 (17%), Positives = 69/197 (35%), Gaps = 15/197 (7%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE-- 63
+ I ARL PP PG +DF +Y++GI A+G ++ +E
Sbjct: 173 RATQAVRPGDAIRATARLLPPPEAVRPGGYDFARDAYFRGIGAVGSLVGKVEVGPPAEPL 232
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANI 116
+ + I + + +F I IG A A+ + I I ++
Sbjct: 233 ALSLRLTAAIDAARNAFTRRITDAIGGQAGAVAAALVTGKRGLISNETNDVLRAAGIYHV 292
Query: 117 LAIPILSFVVIPAGLI-----AILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
++I L V+ + + L+ + P +A G ++ + + + +
Sbjct: 293 VSISGLHMVLAAGVVFWLVRAGLALVPMLALACPIKKIAAG-TAMLGVTAYCAFSGWDVA 351
Query: 172 IGRIPETSFVTIVVEFL 188
R + V + +
Sbjct: 352 AERALIMTLVMLGAILV 368
>gi|84503086|ref|ZP_01001182.1| competence protein [Oceanicola batsensis HTCC2597]
gi|84388630|gb|EAQ01502.1| competence protein [Oceanicola batsensis HTCC2597]
Length = 683
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 61/377 (16%), Positives = 126/377 (33%), Gaps = 57/377 (15%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L ++ F A + + P PG F +F++ ++ G
Sbjct: 343 LVFDRRAITFRALAMAALVVLVLRPEALLSPG-FQMSFAATTALVAVFG----------- 390
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + + + HF+ + YGL AN+LA+P+
Sbjct: 391 -----GLRGRARLRSRLLRGVMAVVVSSSVAGLATAPVGAAHFNTMAHYGLAANLLAVPL 445
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE-TSF 180
+ +V+PAG++A++LM L L+ + VM WGLD+I+ IA ++ P
Sbjct: 446 MGMLVMPAGVVAVVLMPLGLEALALTVMGWGLDVILFIARTVASWPGAVGHVPAPGEWVL 505
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
L + + +R +G + + ++ + P +LI ++G LV ++ +N
Sbjct: 506 PLFAAGGLSLALWQGPLRWLGLVPL---LVAGGLWTQVDRPGILIDDRGALVGVLGENGR 562
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
+ + F+ W + +A Q
Sbjct: 563 ALSRAKGAGFVAQVWLENDGSGREQAAAAALWPAQ------------------------- 597
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
+ + ++ +C +IL+ C + +P L G++
Sbjct: 598 --------GRVRHLTGKRRAEAATCAQGEILVLNHDPPGDPGCE---VFSPRRLHGLGAV 646
Query: 361 EITIIPPSNDNDKVKFI 377
IT + +
Sbjct: 647 AITRDATGLHIRSARAV 663
Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/235 (19%), Positives = 90/235 (38%), Gaps = 16/235 (6%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
A T+ A LSPP+GP PG FDF +++ + A+GY ++ + +
Sbjct: 163 AGLTVMTTAHLSPPAGPVEPGGFDFQRHAWFARLGAVGYT----RVPVVALRPPDPGATR 218
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFV 125
+ + + + +R + A A+ + + +A++LAI L
Sbjct: 219 VFRARMALSDRVRGVLAGDTGAFAAAVMAGDRSGLSREVTETLRRTNLAHLLAISGLHMG 278
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR--IPETSFVTI 183
++ + A L L+ +P+ + W + + + + A G E +FV
Sbjct: 279 LVAGFVYAALR--LAGAAVPYTALRWPVRSVAALVAVAAGAGYLMLSGGSIATERAFVMA 336
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP-YSFSPDLLISEKGNLVALVDK 237
V + +VF + I M + +++L S + + LVA+
Sbjct: 337 AVALVALVFDRRAITFRALAMAALVVLVLRPEALLSPGFQMSFAATTALVAVFGG 391
>gi|240141532|ref|YP_002966012.1| hypothetical protein MexAM1_META1p5131 [Methylobacterium extorquens
AM1]
gi|240011509|gb|ACS42735.1| conserved membrane hypothetical protein; ComEC/Rec2 family domain
[Methylobacterium extorquens AM1]
Length = 752
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 58/359 (16%), Positives = 116/359 (32%), Gaps = 39/359 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + I+ +SS ++ + + A +
Sbjct: 397 SFQMSFGAVAGLIACAPLIDGRVFRTHSSSRIARSASWVAKAVVGTLATTLVAQL----- 451
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + F HF + +GL+ N L +P++S V+PA ++ +L +LD + +M +
Sbjct: 452 -ATAPFATYHFQTVQPFGLVGNALTLPLVSLAVMPAAVLGMLAYPFALDRPVWWLMGLAV 510
Query: 154 DIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
++ I+ I+ + + + + LL + +R + + G+ I +
Sbjct: 511 RGMLDISAWIAGFGQANVVLPAFGTGALMLLAAALLLATLPVSRLRLLALVPAGLGIALA 570
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ D+ I G A+ K+ + PP F+ QW A
Sbjct: 571 ASPIRY---DIYIDRDGAGAAVRGKDGRLVVLGRPPGFVLEQWLKADGDGRPPEAATGAA 627
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
+ + C V ++ K C +DILI
Sbjct: 628 GPR---------------------CDRIGCTLTAMDGRAVALVMDKRAFAEDCARADILI 666
Query: 333 TTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
T R C L+ L +G+ I + + I+ + + PW
Sbjct: 667 T--RLRAPPGCAAPLIADRTFLAVRGATAIRLGTEGPE------IVTARGADQPKPWQP 717
Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 70/198 (35%), Gaps = 17/198 (8%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE-- 63
+ I ARL PP PG +DF +Y++GI A+G ++ +E
Sbjct: 173 RAAQAVRPGDAIRATARLLPPPEAVRPGGYDFARDAYFRGIGAVGSLVGKVEVGPPAEPL 232
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANI 116
+ + I + + +F I IG A A+ + I I ++
Sbjct: 233 ALSLRLTAAIDAARNAFTRRITDAIGGQAGAVAAALVTGKRGLISNETNDVLRAAGIYHV 292
Query: 117 LAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD------IIIHIAHRISVAHNEF 170
++I L V+ + ++ L +P +AW + ++ + + + +
Sbjct: 293 VSISGLHMVLAAGVVFWLVRA--GLALVPMLALAWPIKKIAAGTAMLGVTAYCAFSGWDV 350
Query: 171 CIGRIPETSFVTIVVEFL 188
R + V + +
Sbjct: 351 AAERALIMTLVMLGAILV 368
>gi|209964502|ref|YP_002297417.1| ComEC [Rhodospirillum centenum SW]
gi|209957968|gb|ACI98604.1| ComEC [Rhodospirillum centenum SW]
Length = 726
Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats.
Identities = 64/359 (17%), Positives = 129/359 (35%), Gaps = 40/359 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + +SA + + W + + A
Sbjct: 406 SFQMSFGAVIALVSAY---------EAAGPTLRDWHAQAGPVRRGLLYVGGLALTSLVAG 456
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + F + HF YGL+AN+LA+P+ SF V+P GL+ LM L+ M G+
Sbjct: 457 TATTPFGLYHFQQGANYGLLANLLAVPVTSFWVMPWGLVVYGLMPFGLEGWAVDAMGLGV 516
Query: 154 DIIIHIAHRISVAHNEF-CIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
I+ AH ++ + P + + + L + + + R +G + +G+ + +
Sbjct: 517 QAILWTAHAVAGLPGAVLHVPAAPPAALLLFGIGGLWLALWRRSWRLLGLLPMGLGVALA 576
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
T PDL ++ G LV + + L+ + F W
Sbjct: 577 ATAA---PPDLRVTSSGKLVGVRAADGSLLVSTGRAARFEAEVWWR-------------- 619
Query: 272 EDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL 331
++ + ++ L C + V ++ + + + +C +D++
Sbjct: 620 ---RDGGTDAPPRWPKAGTADGRLTCDPLVCRYRL-NGVTAAIVMKPEGLDPACTGADLV 675
Query: 332 ITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
IT +R + C+ +I L+++G+ + I D I L PW+
Sbjct: 676 ITRLRAL---GCDGPRVIDSGALRERGAHAVFIGA-----DGRIVIRTGRPHPLARPWS 726
Score = 43.2 bits (100), Expect = 0.071, Method: Composition-based stats.
Identities = 41/219 (18%), Positives = 77/219 (35%), Gaps = 11/219 (5%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
PA T I +A L PP PG +DF +Y+ + A+G+ S + W
Sbjct: 189 PAGTRIGLLAVLRPPPDMPEPGAYDFRRHAYFLRLGAVGFALSA-AEPMPAPPPEGWAAA 247
Query: 72 K--ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA-------NILAIPIL 122
+ + ++Q + A + A A+ L IP L A ++L+I L
Sbjct: 248 QAWLERLRQGIAERVEARLDGATGAVATALLNGEPTAIPESDLEAMRVSGLQHLLSISGL 307
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
++ + L +L+L P + A ++ + +P
Sbjct: 308 HIGLVAGLVFFTLRALLALVE-PLALRRPIKKWAAVAALAGALGYTVLVGAPVPTVRSAL 366
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ LL V + + + T+++L+ P
Sbjct: 367 MTGLMLLAVLADRSPFSLRVVAFAATVVLLWQPEALLGP 405
>gi|85703339|ref|ZP_01034443.1| competence protein [Roseovarius sp. 217]
gi|85672267|gb|EAQ27124.1| competence protein [Roseovarius sp. 217]
Length = 680
Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats.
Identities = 58/347 (16%), Positives = 122/347 (35%), Gaps = 48/347 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ ++ G+ W ++
Sbjct: 372 GFQMSFAATVALVAVFGWLR-----DAGLARGPRWLRPVLA----------VVISSAVAG 416
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
A+ + HF+ +GL+AN++++P++ +V+PA +IA LL+ L +D I VM GL
Sbjct: 417 AATAPVAAAHFNQYAQFGLLANLVSVPLMGALVMPAAVIATLLVPLGMDWIALRVMELGL 476
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFV-TIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
I+ +A ++ P + + L +V + R +G + I + +
Sbjct: 477 RWILGVAEWVTALDGARVPVVAPGPYVLPLLAFGALFIVLWQGRTRFLGVLPIILGTLF- 535
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ ++ P +++S+ G L+ ++ + N F+ W
Sbjct: 536 --WSFTERPVMVVSDTGTLIGIMTEAGRALNKPTGGGFVADNWLE------------NDG 581
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
D ++ + + Q R V V K LSC + +++
Sbjct: 582 DDASRDAAFARWSEGLAQSR----------------GVRVVAGKAAAAKPLSCDGAKLVV 625
Query: 333 TTI-RDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFII 378
++ D ++TP+ L+ GSL + +I
Sbjct: 626 LSVTPDTAPAETLDCQIVTPDTLRATGSLAYYATANGLRLVTARDLI 672
Score = 52.9 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/227 (15%), Positives = 79/227 (34%), Gaps = 17/227 (7%)
Query: 20 IARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQS 79
A L P GP PG FDF +++ GI A+GY + + + + + + + +
Sbjct: 169 TAHLGPTGGPVEPGGFDFQRHAWFLGIGAVGYTRTPVLRLEAGQG-----GQALFRARMA 223
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFVVIPAGLI 132
+++ + A A+ + + + L +A++LAI L ++ +
Sbjct: 224 LSQHVQSRLPGQTGAFAAAIMTGDRAGLSLATLDVMRISNLAHLLAISGLHMGLLAGFVF 283
Query: 133 AIL-LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
A + L + + + A + + I G + +V V
Sbjct: 284 AAVRLGHAAAPRLGLRLPAKKISAALAILAAAGYLGLSG--GNVATERAFVMVAVIFGAV 341
Query: 192 FCKTNIRHIGSIMIGITIIILFTFPYSFSP--DLLISEKGNLVALVD 236
+ + ++ + I++ P + + LVA+
Sbjct: 342 MLERRAFSLRAVAVAAMIVLTLHPEALLGPGFQMSFAATVALVAVFG 388
>gi|254440053|ref|ZP_05053547.1| Competence protein [Octadecabacter antarcticus 307]
gi|198255499|gb|EDY79813.1| Competence protein [Octadecabacter antarcticus 307]
Length = 697
Score = 153 bits (386), Expect = 5e-35, Method: Composition-based stats.
Identities = 61/334 (18%), Positives = 128/334 (38%), Gaps = 46/334 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ ++ G + + SI F++ + A +
Sbjct: 367 GFQMSFAATTALVAVFGVMRQLDLPRVPRWA---------KSIGAVFISSLVAGL----- 412
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + F HF+ I GLIAN++++P++ +V+PA ++A LL L L+ I VM GL
Sbjct: 413 -ATAPFAAFHFNQIAQLGLIANLMSVPLMGTLVMPAAVLAALLAPLGLEMIGLWVMDLGL 471
Query: 154 DIIIHIAHRISVAHNEFCIGRIPET-SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
I+ +AH ++ P I + + +V + +IR G + + +
Sbjct: 472 RWILGVAHFVAGQDGALRHVVTPGPEVLALIALGGIFVVQWRGSIRLAGVAPVILGFAL- 530
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ + P +LI++ G+L+ ++ + + + SF W P + ++
Sbjct: 531 --WQVAERPAVLIADSGSLIGVMTETGRDVSKESGESFAADSWLENDGAPVEQWVAYARD 588
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR--LSCQLSDI 330
L E+ ++ V + V L+ + C +DI
Sbjct: 589 GLLERGRA----------------------VSVTVAGTRVLNLRGATALAAIDGCGGADI 626
Query: 331 LITTIRDINTKLCNVSLLITPEILQKQGSLEITI 364
+IT + C + L++ G++ +
Sbjct: 627 VITNQEMGDMAGCE---VYDAVRLRETGAMAGWV 657
Score = 67.5 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 13/139 (9%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSI--PKMIYSSESHNTWT 69
+ LSPPSGP PG FDF ++++G+ A+GY + + S S W
Sbjct: 153 EPGQVVLMTGHLSPPSGPVEPGGFDFQRMAWFEGLGAVGYTRTPVLLGAVASEGSAGLWV 212
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPIL 122
+++ +I + + + A A+ + I L +A++LAI +
Sbjct: 213 YRQRVAISRGVQDRL----EGESGAFAAAIMTGDRSGIGQNSLTALRAFNLAHLLAISGM 268
Query: 123 SFVVIPAGLIAILLMILSL 141
++ A + A L +L
Sbjct: 269 HMGILAAFIFATLRYGFAL 287
>gi|58039725|ref|YP_191689.1| putative DNA uptake protein [Gluconobacter oxydans 621H]
gi|58002139|gb|AAW61033.1| Putative DNA uptake protein [Gluconobacter oxydans 621H]
Length = 742
Score = 152 bits (384), Expect = 8e-35, Method: Composition-based stats.
Identities = 43/236 (18%), Positives = 95/236 (40%), Gaps = 14/236 (5%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
F +F++ I+ G + W S L + A + T
Sbjct: 411 FQMSFAAVMGLIAGYGALREPLMRL---RGEGEWYRVVASHCAALVLTSLMAGLATL--- 464
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
+ HF + + ++AN++A+P+ + ++P GL+A++ M + +M G+
Sbjct: 465 ---PVSMAHFGALQPWFVLANLVAVPLAAVWIMPVGLLALVAMPFHAEAPFLKLMGMGIR 521
Query: 155 IIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
I+ +A R++ + +P + +++ + K + G + I + + ++
Sbjct: 522 IVQTLAERVAAFPMAHQPVPAMPGWGLLLVMLGLCFLCLWKGRVCLAGLLPIAVGLASIW 581
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLIS-NYSNPPSFIFSQWKSALITPFHEAPH 268
P PD+L+S L+A+ + L+ ++S+ W+ AL P P
Sbjct: 582 LAP---KPDVLVSPDAGLMAVRRQGVLLVGSHSSLQRRTLEDWQQALALPTAPLPS 634
Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/244 (14%), Positives = 75/244 (30%), Gaps = 9/244 (3%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
+TI L P P++PG D +++ G++ GY P + + SH +W
Sbjct: 199 EPGSTIRLRTMLRAPPPPSWPGGRDLQREAWFSGLAGSGYALG-PASLSGAPSHQSWLES 257
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLI---KHFHCIPVYGLIANILAIPILSFVVIP 128
++ + + + +H +A++LA+ L ++
Sbjct: 258 LRETVALRANAALSDQTAAIAATLLAGEAGSIDQHTRETFSASGLAHLLAVAGLHLGLVM 317
Query: 129 AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL 188
A +I L L I + + W I +A ++ A G + + +
Sbjct: 318 AAVIVTLRC--GLAAIEYVALRWPCRQIAAVAGLLAGAGYVMLTGAHLPSLRALGMASIV 375
Query: 189 LMVFCKTNIRHIGSIMIGITIIILF---TFPYSFSPDLLISEKGNLVALVDKNTLISNYS 245
+ + + ++IL S + + L+A
Sbjct: 376 TLAIVSGRRVLSMRSLSIVALLILLVSPVSVVDVSFQMSFAAVMGLIAGYGALREPLMRL 435
Query: 246 NPPS 249
Sbjct: 436 RGEG 439
>gi|58617330|ref|YP_196529.1| putative competence locus E protein 3 [Ehrlichia ruminantium str.
Gardel]
gi|58416942|emb|CAI28055.1| Similar to competence locus E protein 3 [Ehrlichia ruminantium str.
Gardel]
Length = 673
Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 65/378 (17%), Positives = 141/378 (37%), Gaps = 44/378 (11%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I ++++ F A I L P P F +F++ I++ F +
Sbjct: 336 IDRRHNNFCAIAIAAFIILLCYPEAVLNP-SFQMSFAAVLALIASCDIFTKL-------- 386
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
I I Q F + + +++ + ++I HFH + G+ N+LAIPI +
Sbjct: 387 -------IIIGDILQYFSSIVLSSL--IAGLATLPYVIYHFHNFSIIGVFVNVLAIPITT 437
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETSFVT 182
F +IP L+ ++L ++L+ + + ++++I++ +S + + S +
Sbjct: 438 FFIIPLSLLYVVLSFVNLEFYISYALESSVKLLLYISNYVSKIDSLILSFHAVSSVSILV 497
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
I + FL + ++R +G ++I + I F +PD+L++ V D
Sbjct: 498 ITLGFLFLCLWNGSLRFLGLVVIVCGLFIGF---QYVTPDILVNINNIAVKESDGQLYSV 554
Query: 243 NY-SNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
N ++ FI W ++ Q L + F C
Sbjct: 555 NKNAHITGFIGLVW------------------AKQNGQQKLLKYNLENDKCLF-CEAGKG 595
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLE 361
C+ + + + + + +C D++I + + + C+ ++ + G
Sbjct: 596 CIYT-KQKRKILIAYTSEYVIQNCLDIDLVIQFGKFVYPQECHKQY-LSYVDIISHGPYF 653
Query: 362 ITIIPPSNDNDKVKFIIK 379
I ++ K I
Sbjct: 654 IWVLDNKVKISKHNNRIW 671
Score = 44.4 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 56/151 (37%), Gaps = 14/151 (9%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
++S T+ + I A + PP P +DF+ SY+K I+ IG+ S ++
Sbjct: 140 LVSRTQWDENIEIGDKILLSAIVYPPQTAVSPFSYDFSRVSYFKKINGIGFTISNVRLFE 199
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKH--------FHCIPVYGL 112
+S + + I I+ N+ + S +I I G
Sbjct: 200 KRKSKKIFEY--IELIRLHIYKLFLRNLTWDTANVVSALVIGKKDGISNDIMGNIRNAG- 256
Query: 113 IANILAIPILSFVVIPAGLIAI---LLMILS 140
IA++ AI L I ++ LL+
Sbjct: 257 IAHLFAISGLHLSFITGLFFSLSRNLLVFFG 287
>gi|57239310|ref|YP_180446.1| putative competence locus E protein 3 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161389|emb|CAH58313.1| putative competence protein [Ehrlichia ruminantium str.
Welgevonden]
Length = 650
Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 63/378 (16%), Positives = 140/378 (37%), Gaps = 44/378 (11%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I ++++ F A I L P P F +F++ I++ F +
Sbjct: 313 IDRRHNNFRAIAIAAFIILLCYPEAVLNP-SFQMSFAAVLALIASCDIFTKL-------- 363
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
I I Q F + + +++ + ++I HFH + G+ N+LAIP+ +
Sbjct: 364 -------IIIGDILQYFSSIVLSSL--IAGLATLPYVIYHFHNFSIIGVFVNVLAIPVTT 414
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETSFVT 182
F +IP L+ ++L ++L+ + + ++++++ +S + + S +
Sbjct: 415 FFIIPLSLLYVVLSFVNLEFYISYALESSVKLLLYVSSYVSKIDSLILSFHAVSSVSILI 474
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
I + FL + ++R +G ++I + I F +PD+L++ V D
Sbjct: 475 ITLGFLFLCLWNGSLRFLGLVVIVCGLFIGF---QYVTPDILVNINNIAVKESDGQLYSV 531
Query: 243 NY-SNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
N ++ FI W ++ Q L + F C
Sbjct: 532 NKNAHITGFIGLVW------------------AKQNGQQKLLKYNLENAKCLF-CEAGKG 572
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLE 361
C+ + + + + + +C D++I + + + C+ ++ + G
Sbjct: 573 CIYT-KQKRKILIAYTSEYVIQNCLDIDLVIQFGKFVYPQECHKQY-LSYVDIISHGPYF 630
Query: 362 ITIIPPSNDNDKVKFIIK 379
I ++ K I
Sbjct: 631 IWVLDNKVKISKHNNRIW 648
Score = 45.2 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 56/151 (37%), Gaps = 14/151 (9%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
++S T+ + I A + PP P +DF+ SY+K I+ IG+ S ++
Sbjct: 117 LVSRTQWDENIEIGDRILLSAIVYPPQTAVSPFSYDFSRVSYFKKINGIGFTISNVRLFE 176
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKH--------FHCIPVYGL 112
+S + + I I+ N+ + S +I I G
Sbjct: 177 KRKSKKIFEY--IELIRLHIYKLFLRNLTWDTANVVSALVIGKKDGISNDIMGNIRNAG- 233
Query: 113 IANILAIPILSFVVIPAGLIAI---LLMILS 140
IA++ AI L I ++ LL+
Sbjct: 234 IAHLFAISGLHLSFITGLFFSLSRNLLVFFG 264
>gi|58579276|ref|YP_197488.1| putative competence locus E protein 3 [Ehrlichia ruminantium str.
Welgevonden]
gi|58417902|emb|CAI27106.1| Similar to competence locus E protein 3 [Ehrlichia ruminantium str.
Welgevonden]
Length = 673
Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 63/378 (16%), Positives = 140/378 (37%), Gaps = 44/378 (11%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I ++++ F A I L P P F +F++ I++ F +
Sbjct: 336 IDRRHNNFRAIAIAAFIILLCYPEAVLNP-SFQMSFAAVLALIASCDIFTKL-------- 386
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
I I Q F + + +++ + ++I HFH + G+ N+LAIP+ +
Sbjct: 387 -------IIIGDILQYFSSIVLSSL--IAGLATLPYVIYHFHNFSIIGVFVNVLAIPVTT 437
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETSFVT 182
F +IP L+ ++L ++L+ + + ++++++ +S + + S +
Sbjct: 438 FFIIPLSLLYVVLSFVNLEFYISYALESSVKLLLYVSSYVSKIDSLILSFHAVSSVSILI 497
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
I + FL + ++R +G ++I + I F +PD+L++ V D
Sbjct: 498 ITLGFLFLCLWNGSLRFLGLVVIVCGLFIGF---QYVTPDILVNINNIAVKESDGQLYSV 554
Query: 243 NY-SNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
N ++ FI W ++ Q L + F C
Sbjct: 555 NKNAHITGFIGLVW------------------AKQNGQQKLLKYNLENAKCLF-CEAGKG 595
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLE 361
C+ + + + + + +C D++I + + + C+ ++ + G
Sbjct: 596 CIYT-KQKRKILIAYTSEYVIQNCLDIDLVIQFGKFVYPQECHKQY-LSYVDIISHGPYF 653
Query: 362 ITIIPPSNDNDKVKFIIK 379
I ++ K I
Sbjct: 654 IWVLDNKVKISKHNNRIW 671
Score = 45.2 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 32/151 (21%), Positives = 56/151 (37%), Gaps = 14/151 (9%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
++S T+ + I A + PP P +DF+ SY+K I+ IG+ S ++
Sbjct: 140 LVSRTQWDENIEIGDRILLSAIVYPPQTAVSPFSYDFSRVSYFKKINGIGFTISNVRLFE 199
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKH--------FHCIPVYGL 112
+S + + I I+ N+ + S +I I G
Sbjct: 200 KRKSKKIFEY--IELIRLHIYKLFLRNLTWDTANVVSALVIGKKDGISNDIMGNIRNAG- 256
Query: 113 IANILAIPILSFVVIPAGLIAI---LLMILS 140
IA++ AI L I ++ LL+
Sbjct: 257 IAHLFAISGLHLSFITGLFFSLSRNLLVFFG 287
>gi|148556117|ref|YP_001263699.1| ComEC/Rec2-like protein [Sphingomonas wittichii RW1]
gi|148501307|gb|ABQ69561.1| ComEC/Rec2-related protein [Sphingomonas wittichii RW1]
Length = 714
Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats.
Identities = 64/360 (17%), Positives = 132/360 (36%), Gaps = 34/360 (9%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIY-SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+F + ++A+ P++ ++ + + L+ + + +
Sbjct: 386 SFQLSFAAVTALVATLDHPRVAAFAARRDEGMAARFGRGLAVLLLSGLVIEV------AL 439
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ + HFH YG +AN++AIP+ +FV++P +A+LL I + + +++ L ++
Sbjct: 440 APIALFHFHKSGFYGALANMVAIPLTTFVIMPLEALALLLDIAGIGAPAWWLVSQALALL 499
Query: 157 IHIAHRISVAHNEFC-IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+ IA ++ A + + +F + L + +T R G + + +
Sbjct: 500 LWIARTVAAAPGAVAMLPTMAWGAFALMAAGGLWLALWRTRARRWGLLPVAAGALWALLS 559
Query: 216 PYSFSPDLLISEKGNLVALVDKNTL-ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDL 274
P +PDLL++ G VA V + +I A P
Sbjct: 560 P---TPDLLVTGDGRHVAFVLGDGRVALLRDRAGDYIRGVLGEAAGVDAEALPVDALMQA 616
Query: 275 QEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITT 334
+ + +I R + + L + + + R + +C +DI I+
Sbjct: 617 RCSADLCITDIQRGGRRWRILATRSPYRLDWTR-------------LSRACAAADIAISE 663
Query: 335 IRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTKHRI 394
R L I +L + G L I D D+ +A H PW+ R+
Sbjct: 664 RRL-PRGCTPRWLKIDRPLLARTGGLAI-------DLDRGAVDSVAAAVGRH-PWSTFRM 714
Score = 42.1 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 42/89 (47%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P A I ARL PP+ PA PG +DF +++++GI A G P+++ + +
Sbjct: 169 PVAAGGRIRVRARLMPPAPPAVPGAYDFARAAWFQGIGATGKALDPPRIVPAGDGRGPLD 228
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASI 98
W + S E R + G +AS+
Sbjct: 229 WLADRRARLSEHIEARVTGMSAGGIAASL 257
>gi|85374134|ref|YP_458196.1| membrane metal-binding protein [Erythrobacter litoralis HTCC2594]
gi|84787217|gb|ABC63399.1| predicted membrane metal-binding protein [Erythrobacter litoralis
HTCC2594]
Length = 741
Score = 150 bits (378), Expect = 4e-34, Method: Composition-based stats.
Identities = 64/368 (17%), Positives = 121/368 (32%), Gaps = 28/368 (7%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ ++ L P P F +F++ I+ + + P +
Sbjct: 378 LALGREPLSLRMVAVAAVFVLLLWPESLVGP-SFQMSFAAV---IAIVALHNAEPVKRFL 433
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ W + + I ++ HFH VYG +AN++AIP+
Sbjct: 434 APREEGWFAHVGRRALMLLVTGLVIEIALM------PIVLFHFHRAGVYGALANVIAIPL 487
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI-GRIPETSF 180
++F+ +P IA+ L + L + ++ LD+++ IAH S + ++ +
Sbjct: 488 VTFISMPLIAIALALDAVGLGEPVWWLVGQSLDLLLGIAHFTSSQPGAVKLMPQMGLGTL 547
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
V L + K R +G + ++L P PD+LIS G V + + N L
Sbjct: 548 SLFVAGGLWLALWKGRRRLLGFAPVAAGTLLLLLTPV---PDILISGDGRHVGIAEDNRL 604
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
I + + Q I R +
Sbjct: 605 IMLRESRSDYARDNLMELAGMSGEPVTITDWPGAQCSRDFCTVTIQRGGRDW-------H 657
Query: 301 FCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSL 360
+ R V + + +C+ S I+I R + L L + G L
Sbjct: 658 VLMARSRDRV------EERALAAACERSHIVI-ADRWLPRSCRPQWLKADRRFLGQSGGL 710
Query: 361 EITIIPPS 368
+ +
Sbjct: 711 ALFLEEER 718
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 63/194 (32%), Gaps = 17/194 (8%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ D + ARL PP+ P PG ++F +++ G +A G +++
Sbjct: 192 RARDDLRENAVVRFRARLMPPAPPMVPGAYNFARRAWFDGYAATGSVLGEIELVEPPPPP 251
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY-------GLIANILA 118
++++++ +R + A+ F I + ++L+
Sbjct: 252 TG-----LAAVQRFLSGHVRDRVDGSAGTIAAAFASGDRGAITEADEEAMRDAGLTHLLS 306
Query: 119 IPILSFVVIPAGLIAILL-----MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
I L I A + L + ++A G+ + I + + +
Sbjct: 307 ISGLHVSAIIAAAYILSLKLLALWPWLALRVRLPLVAAGIGALAGIGYTLLTGAEVPTVR 366
Query: 174 RIPETSFVTIVVEF 187
V I +
Sbjct: 367 SCAAAVLVLIALAL 380
>gi|144897811|emb|CAM74675.1| ComEC/Rec2-related protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 696
Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats.
Identities = 54/357 (15%), Positives = 132/357 (36%), Gaps = 37/357 (10%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++A+ Y + + S + + + + + +S +
Sbjct: 352 SFQMSFAAVAALIATYEVVAKPMAGWSVTH--SRPHHRLLLYLAGVVLSTLV--AGSSTA 407
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
++ HF+ V+ ++AN+LA+PI V+P ++++LLM L L+++ M W + ++
Sbjct: 408 LYGAYHFNRFAVWSVLANLLAVPITGVAVMPFAMLSLLLMPLGLEHLALVPMGWAVTVVN 467
Query: 158 HIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+A ++ + + + L ++ + + R G + + + F
Sbjct: 468 MVAAWVAALPGAAITLPPLAPWGMACFTLGGLWLLIWRGSWRLWGLAPMVLGLSGFFL-- 525
Query: 217 YSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQE 276
+ PDLL+ +G L ++ + S I W D +
Sbjct: 526 -AHPPDLLVDGRGYAFGLRMEDGSLLV-SRGGRIIKESW-----------------DRRA 566
Query: 277 KNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIR 336
S + + L C+ R ++V +++ + I +C + ++++ +
Sbjct: 567 GPLSIERWPKQGRSHDGTLSCDPLGCI-WRRDGMVVALIQNEAGIAAACASAQVVVSAVP 625
Query: 337 DINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTKHR 393
+ L+I L ++G+ + + + A PW+ HR
Sbjct: 626 VRDA-CRGPRLVIDRIDLWRRGAHALWLEDLK--------TLSVAKWQGKRPWS-HR 672
Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats.
Identities = 38/219 (17%), Positives = 74/219 (33%), Gaps = 8/219 (3%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
K+ +P P I A L PPS P PG FDF +++ G+ A+G S I +
Sbjct: 135 KQAEPVPVGAEIRLWANLMPPSQPVAPGAFDFARHAWFLGLGAVGSGLSE-VEILTPPGQ 193
Query: 66 NTWTWKKISSIKQSFLNEIR-ANIGTYGSASASIFLIKHFHCIPVY--GLIANILAIPIL 122
W + + I A G + + Y +A++L+I L
Sbjct: 194 GYWLNRLRHQVTLRVTEAIPGAAGGVAAALITGETAGIPRQVMDQYRDSGLAHLLSISGL 253
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGL-DIIIHIAHRISVAHNEFCIGRIPETSFV 181
++ IL L +P + + +A ++ + +P
Sbjct: 254 HMSLLAGMAFFILRG--GLALVPRVALNHPIKKWAALVAMILTFLYMLLAGAPVPAQRAF 311
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ +L+ ++ +++L P + +
Sbjct: 312 LMT-GIVLLAVLLDRSALSMRLVAWAAVLVLVVSPEALT 349
>gi|163795625|ref|ZP_02189591.1| anthranilate phosphoribosyltransferase [alpha proteobacterium
BAL199]
gi|159179224|gb|EDP63757.1| anthranilate phosphoribosyltransferase [alpha proteobacterium
BAL199]
Length = 641
Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats.
Identities = 61/355 (17%), Positives = 131/355 (36%), Gaps = 35/355 (9%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEI-RANIGTYGSASA 96
+F + ++A+ + + S ++ +++ L + S
Sbjct: 315 SFQLSFAAVTALVAVWEV-----KSGRPGFRRSRRFGAVRWVLLYLLGVVATSVVASLVT 369
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
S + HF +PV G +AN++A+P+ +FV +PAG+ +++ M L+ P +M WG+D
Sbjct: 370 SPIVTHHFQQVPVMGAVANVVAVPVTAFVTMPAGVASLVAMPFGLEAGPLTLMGWGIDAT 429
Query: 157 IHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+ A+ S + + + + L + +T IR +G ++G I
Sbjct: 430 LWAANAASDGPLTAIGVAALGTGPLAVLALGGLWLAIWRTAIRWLGVAIVGGAGIWSVL- 488
Query: 216 PYSFSPDLLISEKGNLVAL-VDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDL 274
PD LIS G L A+ V+ + + F+ W+
Sbjct: 489 --DRPPDALISADGKLSAVHVEGQGWLVSQERGSGFVRDAWRRWWGGSP----------- 535
Query: 275 QEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITT 334
++S ++ ++ +F C + +I+ V + C +D+++T
Sbjct: 536 ----EASFRQADQAEPSERFAC--DGLGCVVQVNGMILAVPASPEAAIEDCGYADLIVTG 589
Query: 335 IRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ ++I L++ G+ + + I + PW
Sbjct: 590 VH-FRRSCPGSVIVIDRSDLRRNGAHAVWLSANGAR------IRSVGADRGDRPW 637
Score = 76.4 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 73/202 (36%), Gaps = 11/202 (5%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYS-IPKMI 59
M + I ARL PPS P PG FDF ++++GI A+G+ + +
Sbjct: 87 MRLVLSSASTIGIGDRIRMRARLRPPSAPVAPGAFDFQRDAFFRGIGAVGFAVGPVSVLG 146
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL------- 112
S + W+ + I+ + IRA + + A+ L+ I
Sbjct: 147 RGSARWDGRAWEAVDGIRDAVTRRIRAGLSDPAGSIAAAMLVGDRAGIDEPTAAAFRQTG 206
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL-DIIIHIAHRISVAHNEFC 171
+A++LAI L ++ + A++ ++L P + + A + +
Sbjct: 207 LAHLLAISGLHMGLVAGTVFAVVR--VALAACPAIALGRPIKKWAAVAAFAAAGLYLLLA 264
Query: 172 IGRIPETSFVTIVVEFLLMVFC 193
+P + L V
Sbjct: 265 GAPVPTQRAFLMTGLVLGAVLL 286
>gi|159044353|ref|YP_001533147.1| putative competence protein [Dinoroseobacter shibae DFL 12]
gi|157912113|gb|ABV93546.1| putative competence protein [Dinoroseobacter shibae DFL 12]
Length = 694
Score = 149 bits (376), Expect = 6e-34, Method: Composition-based stats.
Identities = 52/353 (14%), Positives = 124/353 (35%), Gaps = 41/353 (11%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + +A+ Y+ + + W S + S A+ +
Sbjct: 361 FQMSFAATTALVITYAHLRDVRWWRGIPKWAKGTASLLLSS----------AVAGAATAP 410
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
HF+ + YGLIAN+ ++P++ +V+P L+A+ + L L+ + M G+ I+
Sbjct: 411 IAAAHFNIVGHYGLIANLASVPVMGTLVMPGALVALAGVPLGLEGVGLFAMEVGIRWILW 470
Query: 159 IAHRISVAHNEFCIGRIPETSFV-TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+A ++ P + IV+ L++ R G + + + + +
Sbjct: 471 VAGTVAGLEGAVGHVVRPMPVVLPLIVLGALVVGLLPWRARWAGLAPVVLALGL---WTQ 527
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEK 277
S P+LLIS+ G L+ ++ + + F W + + ++
Sbjct: 528 SDRPELLISDTGGLLGVMTEQGRALSKGRGDGFAARNWLENDGDGVTQDVAAARAGIE-- 585
Query: 278 NQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRD 337
+ + ++ P + + ++ +C +D+++ R
Sbjct: 586 --AGKGTVSVALGPYRVIQLRGKTGAA---------------QFPEACATADLVVANTRL 628
Query: 338 INTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
+ I L++ G+L +++ ++++ WT
Sbjct: 629 --PRSTGACESIDAWDLRRTGALAVSVTEDGLQ------VVRAKSAEEQRMWT 673
Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 77/196 (39%), Gaps = 11/196 (5%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + LSPP+ P PG FDF ++++G+ A+GY +P ++++ + ++
Sbjct: 144 PLRPGQVVMTTGHLSPPNAPVEPGGFDFRRHAWFEGLGAVGYTR-VPVVLWAEPAQLSFA 202
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPIL 122
+ + + IR I A AS + I + +A++LAI L
Sbjct: 203 ER-VYETRLKLSKAIRDRIAGQPGAFASAIITGDRAAIDRAHVEDLRGSNLAHLLAISGL 261
Query: 123 SFVVIPAGLIAILLMILSLD-NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
++ + L +++L + V + + + + E +F+
Sbjct: 262 HMGLLTGTVFLGLRSLMALWPWLALRVPVKKVAAVCALGAAVVYLFISGMSVA-TERAFI 320
Query: 182 TIVVEFLLMVFCKTNI 197
+ + + + F + +
Sbjct: 321 MVAMILVGVCFDRRAL 336
>gi|220921516|ref|YP_002496817.1| ComEC/Rec2-like protein [Methylobacterium nodulans ORS 2060]
gi|219946122|gb|ACL56514.1| ComEC/Rec2-related protein [Methylobacterium nodulans ORS 2060]
Length = 736
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 61/336 (18%), Positives = 115/336 (34%), Gaps = 35/336 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ I+ + +++ + + A
Sbjct: 397 SFQMSFAAVAGLIACARLLDGRLLRAEGAGPLGRALAWGAAALAGTLATTLVAQ------ 450
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
A+ + F HF + +G++ N L +P++S VV+PA ++ IL +LD + M +
Sbjct: 451 AATAPFATYHFQTLQPFGVVGNALTLPLVSAVVMPAAVLGILAYPFALDRPVWWAMGLAV 510
Query: 154 DIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
++ IA I H + + + + LL+ + +R +G + + L
Sbjct: 511 RGMLDIAAWIRGFDHATLVLPAFGAGALTLLTLGLLLLTLPASRLRWLGLVP---ALAGL 567
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
PDL + G A+ + ++ PP+F QW A
Sbjct: 568 AAAARPERPDLYVDRDGAGAAVRVADGRLATLGRPPAFGLEQWLKA-------------- 613
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
D + ++ L R CV R+ V + + K C +DI+I
Sbjct: 614 DGRSRDDPGLARAER---------CDAVGCVATARNGWRVALARDKRAFEADCARADIVI 664
Query: 333 TTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPS 368
R C L+I L G+ + P
Sbjct: 665 A--RTTAPAACAARLVIDRAFLAAHGATTVRFAPEG 698
Score = 52.9 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 32/74 (43%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ P +I ARL PP A PG +DF +Y++GI A+G ++ +
Sbjct: 172 RGSAPLRPGDSITAKARLLPPPEAARPGGYDFARDAYFRGIGAVGSLLGPVTVLRDAPEP 231
Query: 66 NTWTWKKISSIKQS 79
+ ++I +
Sbjct: 232 PPLRLRIAAAIDDA 245
>gi|254454198|ref|ZP_05067635.1| ComEC/Rec2 family protein [Octadecabacter antarcticus 238]
gi|198268604|gb|EDY92874.1| ComEC/Rec2 family protein [Octadecabacter antarcticus 238]
Length = 430
Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats.
Identities = 62/366 (16%), Positives = 137/366 (37%), Gaps = 56/366 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSI--PKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTY 91
F +F++ ++ G + P+M ++S + ++ + A +
Sbjct: 100 GFQMSFAATTALVAVFGVMRQMDLPRMPRWAKS-----------VGAVIISSLVAGL--- 145
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
+ + F HF+ I GLIAN++++P++ +V+PA ++A +L L ++ + M
Sbjct: 146 ---ATAPFAAFHFNQIAQLGLIANLMSVPLMGTLVMPAAVLAAVLAPLGMEMVGLWAMDL 202
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETS-FVTIVVEFLLMVFCKTNIRHIGSIMIGITII 210
GL I+ +AH ++ P I + + +V + +IR G + I+
Sbjct: 203 GLRWILGVAHFVADQDGALRHVVTPGPEILALISLGGIFVVQWRGSIRWAGVAPV---IL 259
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQ 270
+ + P LLI+E G+L+ ++ + + + + +F W P + +
Sbjct: 260 AFALWHLAQRPALLIAESGSLIGVMTETGRVVSKESVEAFAAESWLENDGAPVAQWVAYE 319
Query: 271 KEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR--LSCQLS 328
++ E+ ++ V + V L+ + C +
Sbjct: 320 RDGFLEQGRT----------------------VSVTVAGTRVLNLRGATALAAIEGCGGA 357
Query: 329 DILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIP------PSNDNDKVKFIIKSAI 382
DI+IT C + L++ G+L I D+ + +++
Sbjct: 358 DIVITNQEMRALAGCE---VYDIVRLRQTGALAGWIETGKLRLISVRDHTGDRIWNTASV 414
Query: 383 ENLHFP 388
P
Sbjct: 415 RRRERP 420
>gi|182678394|ref|YP_001832540.1| ComEC/Rec2-related protein [Beijerinckia indica subsp. indica ATCC
9039]
gi|182634277|gb|ACB95051.1| ComEC/Rec2-related protein [Beijerinckia indica subsp. indica ATCC
9039]
Length = 792
Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats.
Identities = 55/303 (18%), Positives = 105/303 (34%), Gaps = 37/303 (12%)
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
+ + + F+ +FH + Y LI N L + I+ +P L+ LL LD + +
Sbjct: 468 ATMATASFMAYNFHELSPYVLIGNPLTLSIIEIFAVPGALLGTLLYPFGLDAWVWHYIGA 527
Query: 152 GLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITI 209
G+ I+ +A I + S V + + L V ++ +R + I +
Sbjct: 528 GITFIMWLARIIGGWPGATIHLPAFAPWSLVFLSLGVLSAVLWRSALLRASAIPFMLIGL 587
Query: 210 IILFTFPYSFSPDLLISEKGNLVALVDKNTL-ISNYSNPPSFIFSQWKSALITPFHEAPH 268
F+ P D+ + G+ +AL ++ P F QW A
Sbjct: 588 CGAFSGPV---FDIAVPPSGDSLALRGRDGRLAVLGPRPSLFGAEQWLRADADGRDARAA 644
Query: 269 VQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLS 328
+ K CVG V ++ ++ C+ +
Sbjct: 645 RKGNV-----------------------CDKLGCVGHLADGRAVALVLDREAFIEDCRRA 681
Query: 329 DILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFP 388
IL+T + I C S+LI +L+ G+L + + + ++ + P
Sbjct: 682 AILVTPL--IAPSGCAASILIDRSVLRDTGALTLRL------GTGEPTLRRARAPDEDRP 733
Query: 389 WTK 391
W+
Sbjct: 734 WSP 736
Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
T++ PF A T + ARL PP+ + PG +DF +++ I A+G + + + +
Sbjct: 168 TRRAPPFGAGTYVSLKARLLPPARASLPGGYDFARDAWFARIGAVGTALGRIETVSAPD 226
>gi|67458412|ref|YP_246036.1| ComEC/Rec2-related protein [Rickettsia felis URRWXCal2]
gi|67003945|gb|AAY60871.1| ComEC/Rec2-related protein [Rickettsia felis URRWXCal2]
Length = 404
Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats.
Identities = 56/307 (18%), Positives = 124/307 (40%), Gaps = 20/307 (6%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI--GTY 91
F +F + ++ ++ N+W + I + + +NI
Sbjct: 106 SFQLSFIAVLSLVAGFEFYLK-----------NSWLIGENKGIFGAVKFYMASNIYSSFL 154
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
S +I F Y + AN++ +PI SF ++P L+++ ++ D+ +M +
Sbjct: 155 ASIITVPVVINQFFIFSTYSVPANLIVVPITSFFLMPLALLSLPFTMIGFDSYILKLMRF 214
Query: 152 GLDIIIH-IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITII 210
+DIII A+ S+ + + G I S + + F + KT+ R +G +++ I+ I
Sbjct: 215 FIDIIIKSAAYFNSLPRSVWYFGYITNFSILLFLFGFFWICIWKTSWRLLGLVIMIISFI 274
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYS-NPPSFIFSQWKSALITPFHEAPHV 269
+F YS P+L+ V + DK+ + Y+ P+F + W + +
Sbjct: 275 FMF---YSPKPELIFDTNHMAVGIKDKDGKLIIYADKIPTFNRTYWANWFGQKDSMVLPL 331
Query: 270 QKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIV--GVLKRKDMIRLSCQL 327
+ + + + + + I ++ CH S + + L++ +I + C
Sbjct: 332 KDNIFITNHGQKIVINNNNHCEKAEIHINLNYKAKCHGSLITINHNFLRKSPVILIFCNK 391
Query: 328 SDILITT 334
+ + +
Sbjct: 392 KECTVKS 398
>gi|83942600|ref|ZP_00955061.1| competence protein [Sulfitobacter sp. EE-36]
gi|83846693|gb|EAP84569.1| competence protein [Sulfitobacter sp. EE-36]
Length = 682
Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats.
Identities = 59/361 (16%), Positives = 126/361 (34%), Gaps = 50/361 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ ++ G+ + + S++ F
Sbjct: 368 GFQMSFAATTGLVAIFGWLRNAEVSLGPKWLAPAVATVISSAVAGGF------------- 414
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ HF+ I YGL+AN+L++P++ +V+PA + A+++ L L+ IP VM GL
Sbjct: 415 --TAPIGAAHFNTIAQYGLVANLLSVPLMGILVMPAAVAALVMAPLGLEWIPLQVMGAGL 472
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVT-IVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
I+ +A ++ P + + + FL ++ + +R G +G I
Sbjct: 473 RWILLVAQGVAEIDGAQGHVAAPGPWVLPLLALGFLWLLLWQGWLRFAG---LGAVIAAG 529
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ + P +LIS+ G+LV ++ + + F+ W +A +
Sbjct: 530 VLWHGAERPTVLISDTGSLVGVMTPTGRALSKAKGAGFVALNWLENDGDGTDQARAAARW 589
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
+ K ++ + ++ +D +I
Sbjct: 590 PTRPK----------------------------IGGREVIHLSGKRARAAFGACRADQII 621
Query: 333 TTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTKH 392
L + P+ L+ G++ +T+ ++ + A L W K
Sbjct: 622 VLSVVPEPPLTGGCDVFEPDRLRSTGAVALTLY---KGRVTMQTARQKAGTRLWTAWPKD 678
Query: 393 R 393
R
Sbjct: 679 R 679
Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/236 (16%), Positives = 88/236 (37%), Gaps = 14/236 (5%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ LSPPSGP P FDF +++ G+ A+GY + ++ ++ +
Sbjct: 153 ITPGLGVMTTGHLSPPSGPVEPEGFDFQRHAWFAGLGAVGYSRT--PLLAATPAEAGHGG 210
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILS 123
+ + + I+ + A+ I L +A++LAI L
Sbjct: 211 LAVFRARMAASARIQRILPGDIGGFATAITTGDRSAISQDALQDLRASNLAHLLAISGLH 270
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR--IPETSFV 181
++ A + L ++L+L +P+ + W I ++ + G E +F+
Sbjct: 271 MGLLSAVVFGALRIVLTL--VPWIALRWPTRSIAAAGALVAASGYLLLSGGNVATERAFI 328
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS-PDLLISEKGNLVALVD 236
+ V ++ + + + +++L + S + + LVA+
Sbjct: 329 MVAVALGALIIGRRALTLRAVAIAATIVLVLRPEALTGSGFQMSFAATTGLVAIFG 384
>gi|296283864|ref|ZP_06861862.1| ComEC/Rec2-related protein [Citromicrobium bathyomarinum JL354]
Length = 753
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 63/368 (17%), Positives = 129/368 (35%), Gaps = 28/368 (7%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ F G L P P F +F++ ++ S P + +
Sbjct: 384 GREPLTFRLLAVAAGFVLLLWPESVVGP-SFQMSFAAVLAIVALHN---SAPVRAFLAPR 439
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
W + + + I ++ HFH +YG +AN++ IP+++F
Sbjct: 440 EEAWFMRPLRGGAMLLVTGFVIEIALM------PIVLFHFHRTGMYGALANMVGIPLVTF 493
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI-GRIPETSFVTI 183
V +P +A+L ++ + + LD+++ IAH + + + +F
Sbjct: 494 VSMPLIALALLADLVGAGAPVWWLAGASLDLLLGIAHLTASQPGAVKLAPHMGGLAFGLF 553
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
V L + R G + + I I++ + + PD+L+S G VA+++ L+S
Sbjct: 554 VAGGLWIALWSGRGRFWGFVPVLIATILMLS---TSRPDVLVSRDGRDVAIIEGGRLMSL 610
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
+ S+ P Q + + + I R + + L + V
Sbjct: 611 RDSQSSYASDTLAELGALDEPPLPLSQWPGARCSAEFCVATIEREGRRYRLLLARGREYV 670
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEIT 363
+ + +C DI++ R + L +L+K G L I
Sbjct: 671 -------------TERDLAAACARVDIVV-ADRWLPYSCRPRWLKADRRMLEKTGGLAIR 716
Query: 364 IIPPSNDN 371
+ +
Sbjct: 717 LSSREVET 724
Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 54/130 (41%), Gaps = 11/130 (8%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
I ARL PP+ P PG +DF +++++G++A G +I I
Sbjct: 202 GAVIGLTARLMPPAPPLVPGGYDFARAAWFQGLAATGSVVGPVDVIAPPPPGLG----GI 257
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA-------NILAIPILSFVV 126
+S++++ +R+ +G + A+ F I +A ++L+I L
Sbjct: 258 ASVQRNLSAHVRSQLGGSAGSIAAAFASGDRGAIAEADEVAMRDAGLTHLLSISGLHVSA 317
Query: 127 IPAGLIAILL 136
+ A + L
Sbjct: 318 VVAAAYFLAL 327
>gi|16126147|ref|NP_420711.1| ComEC/Rec2 family protein [Caulobacter crescentus CB15]
gi|221234918|ref|YP_002517354.1| DNA translocation competence protein ComA [Caulobacter crescentus
NA1000]
gi|13423355|gb|AAK23879.1| ComEC/Rec2 family protein [Caulobacter crescentus CB15]
gi|220964090|gb|ACL95446.1| DNA translocation competence protein ComA [Caulobacter crescentus
NA1000]
Length = 725
Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats.
Identities = 56/334 (16%), Positives = 115/334 (34%), Gaps = 46/334 (13%)
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
W + +I I A++ + + F ++HF+ + V+GL AN+ P+ SF
Sbjct: 416 STPWWIQGPQAIATWLAVSIAASLV--AGLATAPFAMQHFNRVAVWGLPANLAVSPLSSF 473
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSFVTI 183
V++P I +L L V WG+D+++++A S AH + P +
Sbjct: 474 VIMPFLAIGTVLEPFGLSAPFLAVAGWGIDVMLNVAGLFSEAHGAQHIVASAPPQVLLVA 533
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
+ +++ + +R IG+ + + + +P PD I+ G A+ N +
Sbjct: 534 FLGLMVLCLWRGRLRWIGAPL----ALAVALWPRPTPPDAWIAADGATAAVRSGNAAVLL 589
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
++ F W + C
Sbjct: 590 RTDAKRFGAELWARRRGLE--------------------------PTTWNLYGCDRWICA 623
Query: 304 GCHRSDVIVGVLK-----RKDMIRLSCQLSDILIT--TIRDINTKLCNVSLLITPEILQK 356
+ V + + + + C LSD+++ LC ++L+T + +
Sbjct: 624 PGLGAPVRLSLAWSRRTPDAETLSGLCVLSDVVVVRGPAPARTPPLCADTVLLTGDDFAR 683
Query: 357 QGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
G+ E+ I+ + PW+
Sbjct: 684 YGAAELY------RRSDGWRIVWAQPLRGVRPWS 711
Score = 40.9 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 32/189 (16%), Positives = 61/189 (32%), Gaps = 10/189 (5%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYS-IPKMIYSSESHNTWTWK 71
I A L PP PA PG +DF +++ I +G+ I ++
Sbjct: 174 PGQAIGLRAMLGPPPPPAAPGAYDFARDAWFDSIGGVGFAIGDIGEVTLDQPPLRLRLVM 233
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPILSF 124
+++ + + A +G + + H I +A+IL+I L
Sbjct: 234 AVNAFRWDLAQRLLARMGPTSGGIGAAMVTGHEAWISETQTEAMRASGLAHILSISGLHM 293
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
++ + ++ M + P+ + I A +SV G P I
Sbjct: 294 AIVGGFVFVVVRM--GVAAWPWLALRAPGKKIAASAGLVSVLGYLIVSGAPPPAERAAIT 351
Query: 185 VEFLLMVFC 193
+
Sbjct: 352 ASVAFLAIL 360
>gi|77462543|ref|YP_352047.1| putative competence protein [Rhodobacter sphaeroides 2.4.1]
gi|77386961|gb|ABA78146.1| Putative Competence protein [Rhodobacter sphaeroides 2.4.1]
Length = 684
Score = 147 bits (370), Expect = 3e-33, Method: Composition-based stats.
Identities = 57/339 (16%), Positives = 117/339 (34%), Gaps = 34/339 (10%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + +A+ + ++ + +S + W F + A++ G S
Sbjct: 370 FQMSFAATAALIWGFNALRERVHPKSLSRWV--------APFFMLVVASL--IGGLSTGP 419
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F HF+ I VYGL+ N++A+P++ +V+PA +A LL L P VM G I+
Sbjct: 420 FAAAHFNRIAVYGLLGNLMAVPVMELLVMPAAAVAALLAPLGAAGPPLWVMEQGARWILW 479
Query: 159 IAHRISVAHNEFCIGRIPETSFVTI-VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+AH ++ P + + + L ++ + R G + + ++ +
Sbjct: 480 VAHWVAALPGAVRAVVSPGPWVLPLFALGSLWLMLWRGRARLAGLAGMAMAFLL---WSA 536
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEK 277
+ P L ++ G LV L+ + + F W +A + +
Sbjct: 537 AERPPLFVAADGALVGLMGPEGRALSDARGGGFAARSWLENDGDLADQAAAAARPGFEGP 596
Query: 278 NQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRD 337
++ ++ V++ D + +C + ++I
Sbjct: 597 REARRFQLNGLP-------------------GVVLKGKGAADHLPEACASARLVILAAPY 637
Query: 338 INTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKF 376
LLI L + G+L I +
Sbjct: 638 EGPAP-GACLLIDRTSLARTGALAIREEAGDLRLQPARI 675
Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 79/210 (37%), Gaps = 14/210 (6%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
T+ L PP PA PG FDF +Y+ + A+GY + ++ + + ++
Sbjct: 157 APGMTVALTGHLDPPLPPAEPGGFDFRRMAYFDRLGAVGYTRTPVVLLEPAHAGDS---- 212
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSF 124
++ ++ + ++A A + L I + +A+ILAI L+
Sbjct: 213 PVNRLRTAIREGVQARFPGEAGAFTAAVLTGDEAGISAATMEDLRRSGLAHILAISGLNM 272
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTI 183
++ + ++ L +P + I +A + + G +P +
Sbjct: 273 SLLAGFVFGLVRH--GLALVPPLALRLPTKKIAAVAAFLGTGFYLLMSGGNVPALRSFVM 330
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
+ L+ V + S + II+L+
Sbjct: 331 IAVMLVAVLADRRALSMRSFALSAIIILLW 360
>gi|56552861|ref|YP_163700.1| ComEC/Rec2-related protein [Zymomonas mobilis subsp. mobilis ZM4]
gi|56544435|gb|AAV90589.1| ComEC/Rec2-related protein [Zymomonas mobilis subsp. mobilis ZM4]
Length = 853
Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats.
Identities = 71/392 (18%), Positives = 139/392 (35%), Gaps = 36/392 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM-IY 60
+ I ++ + L P P +F + + + P M I+
Sbjct: 481 MMIGRRAVSLRLVAAAAMLILLIQPENILSP-----SFQLSFAAVGTVIALAEAPIMSIF 535
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
W K I + + + A S + HFH YG +ANILAIP
Sbjct: 536 GDRREAGWLKKTALIIAEIIIGGVMV------EAVVSPVTLYHFHQSGFYGALANILAIP 589
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETS 179
+ +FV IPA +A+L ++ + V + +++ IAH ++ + I
Sbjct: 590 LTTFVTIPAEGLALLTDLIGCSAPFWWVTDQSIRLLLAIAHYVASLPMAGFMLPLIGAWL 649
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
+ ++ +L + KT+ R G + + + ++++ P PD +IS G +A N
Sbjct: 650 CLFMMAGWLWLGLWKTSWRLWGVVPLVLGVLMIILNP---RPDWVISRDGKTIAFKTDN- 705
Query: 240 LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
P F+ W + ++ D +E+ Q + + L +
Sbjct: 706 ----PKQPYQFV---WPEKDSYSQDQIANLIGFDQEEEKQLFGTNLCQKGFCEIALAQQH 758
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
+ K + C +D ++++ R + L I +L+K+G
Sbjct: 759 YNLLAIKG--------KAAGLSPEECSQNDWVVSSARLPVS-CHPKRLKIDRCLLEKRGG 809
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
+ S + I + + H PW +
Sbjct: 810 --LVFYRKSPFLRRPVMIASYSANDQH-PWIR 838
Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 91/239 (38%), Gaps = 16/239 (6%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
A I +L+ P P +D+ ++++ ISA G+ P ++ + +
Sbjct: 296 GLEAGAKIAVRVKLTAPMPAQIPAGYDYAEIAWFQRISATGHALDQPVIL--EKPVLSGF 353
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA-------NILAIPIL 122
++SI Q I +G A+ F+ I +A ++L++ +
Sbjct: 354 SLIMASIHQRLTRHIIEKLGARSGGVAAAFVTNDIGSISESDTVAMRKAGLTHLLSVGGM 413
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI-AHRISVAHNEFCIGRIPETSFV 181
V+ A ++ I + +L+L P+ V+ + L +I A I + + IP +
Sbjct: 414 HIGVVIAAVMFITIRLLALS--PYLVLHFPLRMIAACNAALIGMLYTFVAGCEIPTVRSM 471
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP---YSFSPDLLISEKGNLVALVDK 237
F+L ++ ++IL P S S L + G ++AL +
Sbjct: 472 LTAF-FILFGMMIGRRAVSLRLVAAAAMLILLIQPENILSPSFQLSFAAVGTVIALAEA 529
>gi|126461477|ref|YP_001042591.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides ATCC 17029]
gi|126103141|gb|ABN75819.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides ATCC 17029]
Length = 684
Score = 146 bits (369), Expect = 4e-33, Method: Composition-based stats.
Identities = 57/339 (16%), Positives = 116/339 (34%), Gaps = 34/339 (10%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + +A+ + ++ + +S + W F + A++ G S
Sbjct: 370 FQMSFAATAALIWGFNALRERVHPKSLSRWV--------APFFMLVVASL--IGGLSTGP 419
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F HF+ I VYGL+ N++A+P++ +V+PA +A LL L P VM G I+
Sbjct: 420 FAAAHFNRIAVYGLLGNLMAVPVMELLVMPAAAVAALLAPLGTAGPPLWVMEQGARWILW 479
Query: 159 IAHRISVAHNEFCIGRIPETSFV-TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+AH ++ P + + + L ++ + R G + ++ +
Sbjct: 480 VAHWVAALPGAVRAVVSPGPWVLPLLALGALWLMLWRGRARLAGLGGMATAFLL---WSA 536
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEK 277
+ P L ++ G LV L+ + + F W +A + +
Sbjct: 537 AERPPLFVAADGALVGLMGPEGRALSDARGGGFAARSWLENDGDLADQAAAAARPGFEGP 596
Query: 278 NQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRD 337
++ ++ V++ D + +C + ++I
Sbjct: 597 REARRFQLNGLP-------------------GVVLKGKGAADHLPEACASARLVILAAPY 637
Query: 338 INTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKF 376
LLI L + G+L I +
Sbjct: 638 EGPAP-GACLLIDRTSLARTGALAIREEAGDLRLQPARI 675
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/207 (18%), Positives = 80/207 (38%), Gaps = 8/207 (3%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
T+ L PP PA PG FDF +Y+ + A+GY + ++ + + ++ +
Sbjct: 157 APGMTVALTGHLDPPLPPAEPGGFDFRRMAYFDRLGAVGYTRTPVVLLEPAHARDSPVNR 216
Query: 72 KISSIKQSFLNEIRANIGTYGSASA----SIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
++I++ G + +A + + GL A+ILAI L+ ++
Sbjct: 217 LRTAIREGVQARFPGEAGAFTAAVLTGDEAGISAATMENLRRSGL-AHILAISGLNMSLL 275
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVE 186
+ ++ L +P + I +A + + G +P ++
Sbjct: 276 AGFVFGLVRH--GLALVPPLALRLPTKKIAAVAAFLGTGFYLLMSGGNVPALRSFVMIAV 333
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIILF 213
L+ V + S + TII+L+
Sbjct: 334 MLVAVLADRRALSMRSFALSATIILLW 360
>gi|149184610|ref|ZP_01862928.1| predicted membrane metal-binding protein [Erythrobacter sp. SD-21]
gi|148831930|gb|EDL50363.1| predicted membrane metal-binding protein [Erythrobacter sp. SD-21]
Length = 721
Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats.
Identities = 62/340 (18%), Positives = 122/340 (35%), Gaps = 24/340 (7%)
Query: 38 NFSSYYKGISAIGYFY-SIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+F + + AI + + P + + W I F+ + I +
Sbjct: 398 SFQMSFAAVIAIVALHNARPVRDFLAPQEEVWVRWLSRRILMLFVTGLVIEI------AL 451
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ ++ HFH +YG AN++AIP+++FV +P IA+ L ++ L + LD++
Sbjct: 452 TPIVLFHFHRAGLYGAFANVIAIPLVTFVSMPLIAIALTLDLIGLGAPVWWFAGQSLDLL 511
Query: 157 IHIAHRISVAHNEF-CIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+ IAH + + I + + V L + + R +G + + ++L
Sbjct: 512 LLIAHTTAEQPGAVRLVPHIGLPTVLLCVAGGLWLALWRGRARILGLVPASLGALLLSIS 571
Query: 216 PYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQ 275
PD+LI+ G V LVD + + + P S + L+ D
Sbjct: 572 AA---PDILIARDGRDVGLVDGDGRLFVLRDSPG---SYAQENLVELAGTEALPHSMDTW 625
Query: 276 EKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTI 335
+ S + + + RS + + + +C+ +DI+I +
Sbjct: 626 PGARCSADFCSLPVVRGGGT-----WHLLLARSRQQI----DERALAAACERADIVIAS- 675
Query: 336 RDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVK 375
R + L L G I + D +
Sbjct: 676 RWLPRSCLPRWLKADGRYLAANGGTAIYLADERIDTVGSR 715
Score = 40.9 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 37/212 (17%), Positives = 75/212 (35%), Gaps = 13/212 (6%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ ARL PPS P PG +DF +++ G +A G +++ ++ +
Sbjct: 188 GARVRLRARLMPPSPPMLPGAYDFARRAWFDGYAATGALVGEIEILENAGGDQG----GL 243
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA-------NILAIPILSFVV 126
+ +++ +R +G + A+ F I +A ++L+I L
Sbjct: 244 ARMQRWLSGHVRGELGGSSGSIAAAFASGDRGAISEADEVAMRDAGLTHLLSISGLHVSA 303
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+ A + L IL+L P+ + L ++ G T I
Sbjct: 304 VIAAAYFLALKILAL--WPWLTLRVRLPLLAAAIAAGVGIGYTLLTGAQVPTVRSCIGAV 361
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+L+ ++ ++L +P S
Sbjct: 362 LVLIALALGREPLSMRMVAAAAAVVLLIWPES 393
>gi|260753438|ref|YP_003226331.1| ComEC/Rec2-related protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258552801|gb|ACV75747.1| ComEC/Rec2-related protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 853
Score = 146 bits (368), Expect = 5e-33, Method: Composition-based stats.
Identities = 71/392 (18%), Positives = 139/392 (35%), Gaps = 36/392 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM-IY 60
+ I ++ + L P P +F + + + P M I+
Sbjct: 481 MMIGRRAVSLRLVAAAAMLILLIQPENILSP-----SFQLSFAAVGTVIALAEAPIMSIF 535
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
W K I + + + A S + HFH YG +ANILAIP
Sbjct: 536 GDRREAGWLKKTALIIAEIIIGGVMV------EAVVSPITLYHFHQSGFYGALANILAIP 589
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETS 179
+ +FV IPA +A+L ++ + V + +++ IAH ++ + I
Sbjct: 590 LTTFVTIPAEGLALLTDLIGCSAPFWWVTDQSIRLLLAIAHYVASLPMAGFMLPMIGAWL 649
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
+ ++ +L + KT+ R G + + + ++++ P PD +IS G +A N
Sbjct: 650 CLFMMAGWLWLGLWKTSWRLWGVVPLVLGVLMIILNP---RPDWVISRDGKTIAFKTDN- 705
Query: 240 LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
P FI W + ++ D +E+ + + + L +
Sbjct: 706 ----PKQPYQFI---WPEKDSYSQDQIANLIGFDQEEEKRLFGTNLCQKGFCEIALAQQH 758
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
+ K + C +D ++++ R + L I +L+K+G
Sbjct: 759 YNLLAIKG--------KAAGLSPEECSQNDWVVSSARLPVS-CHPKRLKIDRCLLEKRGG 809
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
+ S + I + + H PW +
Sbjct: 810 --LVFYRKSPFLRRPVMIASYSANDQH-PWIR 838
Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 44/239 (18%), Positives = 91/239 (38%), Gaps = 16/239 (6%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
A I +L+ P P +D+ ++++ ISA G+ P ++ + +
Sbjct: 296 GLEAGAKIAVRVKLTAPMPAQIPAGYDYAEIAWFQRISATGHALDQPVIL--EKPVLSGF 353
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA-------NILAIPIL 122
++SI Q I +G A+ F+ I +A ++L++ +
Sbjct: 354 SLIMASIHQRLTRHIIEKLGARSGGVAAAFVTNDIGSISESDKVAMRKAGLTHLLSVGGM 413
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI-AHRISVAHNEFCIGRIPETSFV 181
V+ A ++ I + +L+L P+ V+ + L +I A + + + IP +
Sbjct: 414 HIGVVIAAVMFITIRLLALS--PYLVLHFPLRMIAACNAALVGMLYTFVAGCEIPTVRSM 471
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP---YSFSPDLLISEKGNLVALVDK 237
F+L ++ ++IL P S S L + G ++AL +
Sbjct: 472 LTAF-FILFGMMIGRRAVSLRLVAAAAMLILLIQPENILSPSFQLSFAAVGTVIALAEA 529
>gi|170748439|ref|YP_001754699.1| ComEC/Rec2-related protein [Methylobacterium radiotolerans JCM
2831]
gi|170654961|gb|ACB24016.1| ComEC/Rec2-related protein [Methylobacterium radiotolerans JCM
2831]
Length = 760
Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats.
Identities = 51/356 (14%), Positives = 116/356 (32%), Gaps = 35/356 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + I+ + + +S+I + + A +
Sbjct: 396 SFQMSFGAVAGLIACARLIDGRLFVRPGAGRIGRLVGTGLSAITGTLATTLVAQV----- 450
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + F HF + +GL+ N L +P++S V+PA +I L +LD + +M +
Sbjct: 451 -ATAPFATYHFQTVQPFGLVGNALTLPLVSLAVMPAAVIGCLAYPFALDRPVWWLMGRAV 509
Query: 154 DIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
++ I+ I+ + + + LL + +R + + + +++
Sbjct: 510 AGMLVISDWIAGFERASLVLPAFGAAALTLLTAGLLLATLPASRLRWLAVPPVLLGLVLA 569
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
DL + +G A+ + ++ +P F+ QW A
Sbjct: 570 ---ARPDRYDLYVDRQGAGAAVRGPDGRLAALGSPSGFVLEQWLKA-------------- 612
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
+ + + C V +++ + C + +LI
Sbjct: 613 ------DGDGRRPAALIVRSGSGRCDRLGCTARLPDGRAVALVRDRRAFPEDCARAAVLI 666
Query: 333 TTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFP 388
T + C L+I ++L +G++ + D +F P
Sbjct: 667 TFL--AAPPTCTGPLVIDRQVLAARGAVALR---ADGDGFAARFARDDGRAVPWRP 717
Score = 45.9 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 4 ITKKYDPFP-AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
++ + P P + ARL PP A PG +DF +Y++GI A+G + S
Sbjct: 169 VSFRKTPIPRPGDVVAATARLLPPPEAARPGGYDFARDAYFQGIGAVGSLVGAVTVRAPS 228
Query: 63 ESHN 66
E
Sbjct: 229 EPPP 232
>gi|332557428|ref|ZP_08411750.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides WS8N]
gi|332275140|gb|EGJ20455.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides WS8N]
Length = 684
Score = 146 bits (368), Expect = 6e-33, Method: Composition-based stats.
Identities = 58/339 (17%), Positives = 118/339 (34%), Gaps = 34/339 (10%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + +A+ + ++ + +S + W F + A++ G S
Sbjct: 370 FQMSFAATAALIWGFNALRERVHPKSLSRWV--------APFFMLVVASL--IGGLSTGP 419
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F HF+ I VYGL+ N++A+P++ +V+PA +A LL L P VM G I+
Sbjct: 420 FAAAHFNRIAVYGLLGNLMAVPVMELLVMPAAAVAALLAPLGAAGPPLWVMNRGARWILW 479
Query: 159 IAHRISVAHNEFCIGRIPETSFV-TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+AH ++ P + + + L ++ + R G + + ++ +
Sbjct: 480 VAHWVAALPGAVRAVVSPGPWVLPLLALGALWLMLWRGRARLAGLGGMAMAFLL---WSA 536
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEK 277
+ P LL++ G LV L+ + + F W +A + +
Sbjct: 537 AERPPLLVAADGALVGLMGPEGRALSDARGGGFAARSWLENDGDLADQAAAAARPGFEGP 596
Query: 278 NQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRD 337
++ ++ V++ D + +C + ++I
Sbjct: 597 REARRFQLNGLP-------------------GVVLKGKGAADHLPEACASARLVILAAPY 637
Query: 338 INTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKF 376
LLI L + G+L I +
Sbjct: 638 EGPAP-GACLLIDRTSLARTGALAIREEAGDLRLQPARI 675
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 79/207 (38%), Gaps = 8/207 (3%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
T+ L PP PA PG FDF +Y+ + A+GY + ++ + + ++ +
Sbjct: 157 APGMTVALTGHLDPPLPPAEPGGFDFRRMAYFDRLGAVGYTRTPVVLLEPAHARDSPVNR 216
Query: 72 KISSIKQSFLNEIRANIGTYGSASA----SIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
++I++ + G + +A + + GL A+ILAI L+ ++
Sbjct: 217 LRTAIREGVQARFPSEAGAFTAAVLTGDEAGISAATMEDLRRSGL-AHILAISGLNMSLL 275
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVE 186
+ ++ L +P + I +A + + G +P ++
Sbjct: 276 AGFVFGLVRH--GLALVPPLALRLPTKKIAAVAAFLGTGFYLLMSGGNVPALRSFVMIAV 333
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIILF 213
L V + S + II+L+
Sbjct: 334 MLAAVLADRRALSMRSFALSAIIILLW 360
>gi|88606770|ref|YP_504918.1| ComEC/Rec2-related protein [Anaplasma phagocytophilum HZ]
gi|88597833|gb|ABD43303.1| ComEC/Rec2-related protein [Anaplasma phagocytophilum HZ]
Length = 705
Score = 146 bits (367), Expect = 8e-33, Method: Composition-based stats.
Identities = 66/389 (16%), Positives = 151/389 (38%), Gaps = 53/389 (13%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I ++++ + + + L+ P P F +F++ + S
Sbjct: 341 IDRRHNSMRSLSVAASVILLATPEAILSP-SFQMSFTAVLSLV---------------SF 384
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ + + ++I Q + + A + S + + ++I HFH + G++AN++A+P +
Sbjct: 385 GNLSCSMVVANNILQYLV--VTATVSLIASLATAPYVIYHFHEFSIAGVLANVIAVPTAT 442
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
FVVIP G++ ++ I ++ W + +I+IAH ++ IP +S + +
Sbjct: 443 FVVIPLGVLYLITCDTFFAPIIAFLLEWAVGFLIYIAHCTALTELFTSFRSIPSSSVLLV 502
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISN 243
+ L C IR G ++ T + + +PD++ + +V D N
Sbjct: 503 TLGLLTASLCTGCIRLFGGVI--FTFLGTVSAITYKTPDIICDDTAVVVKGRDANLYFVM 560
Query: 244 Y-SNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFC 302
+ F ++QW ++ Q +K+ +Q + +C ++ C
Sbjct: 561 QNGSTRGFKYAQW------------------ARDNGQGRIKQQGEFLQDKMLVC-EEGGC 601
Query: 303 VGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEI 362
+ V + + C+ +++I + + C+ I + ++ G I
Sbjct: 602 IYKDH----VLITSDSSFLVAHCKNMNLIICNEQTTYPEECSDIKHIGLQDIRDHGVHYI 657
Query: 363 TIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
+ +K ++ +I PW K
Sbjct: 658 WM-------NKSSVYVEKSI--TRRPWHK 677
Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 50/139 (35%), Gaps = 10/139 (7%)
Query: 2 LSITKKYDPF-PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
L++ DP I+ + PP P +DF +Y+KGI A G+ S +
Sbjct: 145 LAVRTVIDPIIQVGDIIKFTGVIYPPKAPNSHNGYDFARDAYFKGIGATGFTTSAVVLQE 204
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------I 113
ES W + S IK A + + S LI I L +
Sbjct: 205 KGESIRFLDWIERSRIKTY--ERFAARLSRDTTEVLSALLIGKRQGIREEILKDVRRSGL 262
Query: 114 ANILAIPILSFVVIPAGLI 132
A++LAI L + +
Sbjct: 263 AHLLAISGLHLSCVAGMVF 281
>gi|85708727|ref|ZP_01039793.1| predicted membrane metal-binding protein [Erythrobacter sp. NAP1]
gi|85690261|gb|EAQ30264.1| predicted membrane metal-binding protein [Erythrobacter sp. NAP1]
Length = 761
Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 59/373 (15%), Positives = 132/373 (35%), Gaps = 33/373 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ ++ L P P F +F++ ++ S P +
Sbjct: 397 LALGREALSLRMVAAAAVFVLLLWPESVIGP-SFQMSFAAVLAIVALH---SSSPVKAFL 452
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ +W+ + + F + I ++ HFH VYG AN+LAIP+
Sbjct: 453 APREESWSSRAGRRVLMLFFTGLVIEIALM------PIVLFHFHRAGVYGAFANVLAIPL 506
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI-GRIPETSF 180
++F+ +P A+ ++ L + ++ L++++ IAH + + ++ +
Sbjct: 507 VTFISMPLIAFALAFDLVGLGAPFWWLVERSLNLLLSIAHITASQPGAVKLMPQMSGATI 566
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKN-- 238
V L + R +G + + +L P PD+LI +G V + +N
Sbjct: 567 ALFVGGGLWLALWSGKARLLGFVPAALATTLLMATPI---PDVLIGREGRHVGITIENED 623
Query: 239 ---TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFL 295
+L+S + S+ P E + + + R
Sbjct: 624 GSRSLLSLRDSRSSYSRDNLLELASVQSEPIPLADWEGARCSTEFCTINLERG------- 676
Query: 296 CIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQ 355
+ + + R+ ++ + + +C+ +DI++ R + L +L
Sbjct: 677 --DREWSLLLARNRDLI----EERALAAACERADIVV-ADRFLPRSCKPRWLKADRSLLL 729
Query: 356 KQGSLEITIIPPS 368
+ G L + +
Sbjct: 730 QSGGLALNLKDQQ 742
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/217 (16%), Positives = 76/217 (35%), Gaps = 22/217 (10%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ RL PP+ P PG +DF ++++KG+S G +++ + + I
Sbjct: 219 GAVVRMRVRLMPPASPMLPGAYDFARAAWFKGLSGTGSVLGDIEIVEPAPQTSG-----I 273
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY-------GLIANILAIPILSFVV 126
++++++ +R + A+ F I + ++LAI L
Sbjct: 274 AAMQRALSAHVRDRVDGSAGTIAAAFASGDRGAIAEKDEDAMRDAGLTHLLAISGLHVSA 333
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI--- 183
+ A I L +L+L A L + + +A A + T+
Sbjct: 334 VIAAAYFIALKLLAL------FPAIALRVRLPVAAAAFGALAGIAYTLLTGAQVPTVRSC 387
Query: 184 -VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
+L+ ++ + +L +P S
Sbjct: 388 AAAMLVLIALALGREALSLRMVAAAAVFVLLLWPESV 424
>gi|23012427|ref|ZP_00052514.1| COG0658: Predicted membrane metal-binding protein [Magnetospirillum
magnetotacticum MS-1]
Length = 742
Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 48/354 (13%), Positives = 114/354 (32%), Gaps = 33/354 (9%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + + + + S + + + + + + +
Sbjct: 397 SFQMSFGAVAGLIACAPLLDGRLFRTGSPSRLGRAASWLATTVVGTLATTLV--AQIATA 454
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F HF + +G++ N L +P++S VV+P+ ++ +L +LD + +M + ++
Sbjct: 455 PFATYHFQTVQPFGIVGNALTLPLVSLVVMPSAVLGMLAYPFALDRPVWWLMGLAVRGML 514
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
I+ I+ + +P ++ ++ + + + + I L
Sbjct: 515 EISGWIAQFGRATLV--LPAFEPGAMIWLAAALLIATLPVSRLRLLALLPAGIGLALAAV 572
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEK 277
D+ I G A+ ++ ++ PP F+ QW A + +
Sbjct: 573 PTRFDIYIDRDGAGAAVRGRDGRLAVLGRPPGFVLEQWLKADGDGRRPESASGEAGPR-- 630
Query: 278 NQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRD 337
+ C V ++ K C +DILI+ R
Sbjct: 631 -------------------CDRLGCTLVAVDGRAVALVADKRAFPEDCARADILIS--RL 669
Query: 338 INTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
C ++ L +G+ I + I+ + PW
Sbjct: 670 RAPPGCAAPVIADRSFLAARGAAAIRL------GAGRVEIVGARDTGRAKPWQP 717
Score = 45.9 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYS 54
+ I ARL PP A PG +DF +Y++GI A+G
Sbjct: 173 RTAQIVRPGDAIRATARLLPPPEAARPGGYDFARDAYFRGIGAVGSLVG 221
>gi|296447145|ref|ZP_06889076.1| ComEC/Rec2-related protein [Methylosinus trichosporium OB3b]
gi|296255310|gb|EFH02406.1| ComEC/Rec2-related protein [Methylosinus trichosporium OB3b]
Length = 743
Score = 145 bits (365), Expect = 1e-32, Method: Composition-based stats.
Identities = 51/335 (15%), Positives = 114/335 (34%), Gaps = 38/335 (11%)
Query: 59 IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILA 118
+ ++ W + + + A +++ + F+ +FH + Y LI N L
Sbjct: 424 LSAARGAPPWRENLSGLLLRGPGAPLFAT--FCATSATASFMAGNFHELSPYVLIGNPLT 481
Query: 119 IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPE 177
+ I+ F +PA L+ +L LD + + + +G+D++ IA I A +
Sbjct: 482 LAIIEFFAVPAALLGAMLYPFGLDALVWSYLGFGIDLVTRIAGFIGAAPGASLPVRSFAP 541
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
+ V + + L V ++ + + + I I L+ D+ ++ G A+
Sbjct: 542 FALVFLSLAVLSAVLWRSWL--LRASAIPFAAIGLYGAANGEGFDMAVAPSGEAAAVRRP 599
Query: 238 NTLISNYSNPP-SFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLC 296
+ ++ SFI QW R+ + +
Sbjct: 600 SGELALLGRGKLSFIGEQWL------------------------RADADARAPADARGVS 635
Query: 297 IKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQK 356
+ CV V ++ + + C + I+I + C +++ L +
Sbjct: 636 CDELGCVTTTIDGRFVALVFDRRALIEDCARAQIVIASFDAPA--GCGAPIVLDRRKLAE 693
Query: 357 QGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
G++ + D + PW++
Sbjct: 694 TGAVTLRFASERIDWRMARA------PGEDRPWSR 722
Score = 45.6 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYS 54
T+ F A I AR+ PP+ A PG +DF +++ G+ +G
Sbjct: 169 TRGEPKFAAGDFIALKARVLPPAHAALPGGYDFARDAFFAGLGGVGNALG 218
>gi|114327479|ref|YP_744636.1| DNA translocation competence protein ComA [Granulibacter
bethesdensis CGDNIH1]
gi|114315653|gb|ABI61713.1| DNA translocation competence protein ComA [Granulibacter
bethesdensis CGDNIH1]
Length = 710
Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 65/357 (18%), Positives = 133/357 (37%), Gaps = 44/357 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ + + + + + L + A
Sbjct: 372 SFQMSFAAVMALAAGY--------EALGPWLASLAGRRVLHHLTAVALTSLLAGT----- 418
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+++ + I HF + +Y + N++A+P+++F V+PAGL+A+ LM L LD F VM G+
Sbjct: 419 -ASAPYGIYHFGQLQLYFVATNLIAVPLMAFWVMPAGLLAMALMPLGLDRPVFVVMGIGI 477
Query: 154 DIIIHIAH-RISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+I+ +A ++ + +P I + + + +R G ++ I +
Sbjct: 478 RLILTVAKLVAALPAAVLAVPPMPGWGLFMISAGLIWLCLWRGRVRLCGVPVMVAGIASV 537
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ ++ DLLIS +VA+ + P F F + S L+T +A K+
Sbjct: 538 WLTVHA---DLLISADARMVAV---------KAGPRVFAFDKGSSPLLTEAWQAYWGVKD 585
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
L + +S C+ LK + + CQ + +
Sbjct: 586 FTPLSVAGRLATHMAR--------CGESGCLVTPVPGAPRVFLKTGEGTEI-CQPGALAV 636
Query: 333 TTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
I D + C +I+ ++++GS+ + P ++ PW
Sbjct: 637 --ILDGWSSQCRDQPVISLSQIREEGSIAVWFRPGRIS------VLTDRAWRGDRPW 685
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/222 (14%), Positives = 75/222 (33%), Gaps = 12/222 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ + I A + PP PA+PG D +++ I A G+ + + S +
Sbjct: 153 GDHTSLQSGDRISVRALIRPPPWPAYPGAMDRQRDAFFSRIGAFGFALAPVSHLVSRQDA 212
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY-------GLIANILA 118
+ +++ +++ +R + + A A+ L IP +A++LA
Sbjct: 213 VSI---RLARVREMIAEHVRTALPGHEGAVATALLTGDTASIPQSIRILFRDTGLAHLLA 269
Query: 119 IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
I L ++ + A+ +L+ + W I + +S G
Sbjct: 270 IAGLHIAIVMGTIFAVTRWLLTRSEY--MALFWPCRQIAAVISLLSGIAYAVLTGLHVPI 327
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
++ + + +I+ +PY +
Sbjct: 328 IRSAVMAMIACLALFLGRRALSMRGLAIAAALIVLIWPYEVT 369
>gi|167646747|ref|YP_001684410.1| ComEC/Rec2-like protein [Caulobacter sp. K31]
gi|167349177|gb|ABZ71912.1| ComEC/Rec2-related protein [Caulobacter sp. K31]
Length = 726
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 60/385 (15%), Positives = 123/385 (31%), Gaps = 46/385 (11%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
I + L A F +F++ + A+ + P S+ +
Sbjct: 377 GLAIAALVILLVQPESAGAPGFQMSFAAT-AALVALAEAWPRPVREISAPWWIRAIQGSM 435
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
S + S A + F ++HF+ + V+GL AN+ P+ SFV++P I
Sbjct: 436 SWLAVSIGASFVA------GMATGPFAMQHFNRVAVWGLPANLAVAPLSSFVIMPFLAIG 489
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVF 192
L L + WG+ ++ IA + A + P + V +L+
Sbjct: 490 AALEPFGLGGPFLAIAGWGIGAMMWIADGFASAGGAQRLVASGPPFTLALAFVGLMLLCL 549
Query: 193 CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIF 252
+ +R +G+ + + + +P + PD+ I+ G+ A+ + + F
Sbjct: 550 WRGRLRWLGAPL----ALAVALWPRAAPPDVWIAPDGSTAAVRQGREAVLLRPDARRFGA 605
Query: 253 SQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIV 312
W +P + CV S V +
Sbjct: 606 ELWSRRRGLAAPS----------------------DTKPSALYACDRRSCVPTAASPVAL 643
Query: 313 GVLKRKDMIRLS-----CQLSDILITTIRDI-NTKLCNVSLLITPEILQKQGSLEITIIP 366
+ K C ++I++ C +++ + G++E+
Sbjct: 644 ALSWSKAAPDAEALAAMCVEAEIVVLRGAAPVTPPACRDRIVLDADDFAVGGAVELY--- 700
Query: 367 PSNDNDKVKFIIKSAIENLHFPWTK 391
+I+ + PWT+
Sbjct: 701 ---RRGGDWWIVWAQPLRGVRPWTR 722
Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 37/210 (17%), Positives = 78/210 (37%), Gaps = 12/210 (5%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYS-IPKMIYSSESHNTWTWK 71
I A L PP PA PG +DF +++ G+ +G+ ++
Sbjct: 181 PGQAIRLRAMLGPPPPPAAPGAYDFARDAWFHGVGGVGFAIGESRPVVLDPPPWRLRAAM 240
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPILSF 124
+++ + + I A +G A+ + H I +A+IL+I L
Sbjct: 241 AVNAFRWRLASRIVARMGAERGGVAAAMVTGHEAWITQEQTNAMRASGLAHILSISGLHM 300
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET--SFVT 182
++ L ++ L + P+ + + +A ++ G P + +T
Sbjct: 301 AIVGGFLFGLVR--LGIAAWPWAALRVPGKKVAALAGLAAIGTYLVISGAPPPALRAAIT 358
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
V F ++F + I G + + I+++
Sbjct: 359 ATVAFAAILFDRQAITLHGLAIAALVILLV 388
>gi|221638397|ref|YP_002524659.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides KD131]
gi|221159178|gb|ACM00158.1| ComEC/Rec2-related protein [Rhodobacter sphaeroides KD131]
Length = 684
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 57/339 (16%), Positives = 116/339 (34%), Gaps = 34/339 (10%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + +A+ + ++ + +S + W F + A++ G S
Sbjct: 370 FQMSFAATAALIWGFNALRERVHPKSLSRWV--------APFFMLVVASL--IGGLSTGP 419
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F HF+ I VYGL+ N++A+P++ +V+PA +A LL L P VM G I+
Sbjct: 420 FAAAHFNRIAVYGLLGNLMAVPVMELLVMPAAAVAALLAPLGAAGPPLWVMEQGARWILW 479
Query: 159 IAHRISVAHNEFCIGRIPETSFV-TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+AH ++ P + + + L ++ + R G + ++ +
Sbjct: 480 VAHWVAALPGAVRAVVSPGPWVLPLLALGALWLMLWRGRARLAGLGGMATAFLL---WSA 536
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEK 277
+ P L ++ G LV L+ + + F W +A + +
Sbjct: 537 AERPPLFVAADGALVGLMGPEGRALSDARGGGFAARSWLENDGDLADQAAAAARPGFEGP 596
Query: 278 NQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRD 337
++ ++ V++ D + +C + ++I
Sbjct: 597 REARRFQLNGLP-------------------GVVLKGKGAADHLPEACASARLVILAAPY 637
Query: 338 INTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKF 376
LLI L + G+L I +
Sbjct: 638 EGPAP-GACLLIDRTSLARTGALAIGEEAGDLRLQPARI 675
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/207 (18%), Positives = 79/207 (38%), Gaps = 8/207 (3%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
T+ L PP PA PG FDF +Y+ + A+G+ + ++ S+ + ++ +
Sbjct: 157 APGMTVALTGHLDPPLPPAEPGGFDFRRMAYFDRLGAVGFTRTPVVLLESAHAGDSPVNR 216
Query: 72 KISSIKQSFLNEIRANIGTYGSASA----SIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
++I++ G + +A + + GL A+ILAI L+ ++
Sbjct: 217 LRTAIREGVQARFPGEAGAFTAAVLTGDEAGISAATMEDLRRSGL-AHILAISGLNMSLL 275
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVE 186
+ ++ L +P + I +A + + G +P ++
Sbjct: 276 AGFVFGLVRH--GLALVPPLALRLPTKKIAAVAAFLGTGFYLLMSGGNVPALRSFVMIAV 333
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIILF 213
L V + S + II+L+
Sbjct: 334 MLAAVLADRRALSMRSFALSAIIILLW 360
>gi|217977842|ref|YP_002361989.1| ComEC/Rec2-related protein [Methylocella silvestris BL2]
gi|217503218|gb|ACK50627.1| ComEC/Rec2-related protein [Methylocella silvestris BL2]
Length = 779
Score = 144 bits (362), Expect = 3e-32, Method: Composition-based stats.
Identities = 55/336 (16%), Positives = 116/336 (34%), Gaps = 37/336 (11%)
Query: 58 MIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANIL 117
+ E + + + Q + A + ++ F+ +FH + Y LI N L
Sbjct: 431 KPVAGEGARLFWTSVRARLSQGPGGLLFATFCATAATAS--FMAYNFHELSPYVLIGNPL 488
Query: 118 AIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIP 176
+ ++ +P L+ LL + LD + + +G+D ++ A ++ +
Sbjct: 489 TLTVIEVFAVPGALLGTLLYPIGLDPWVWRYLGFGVDGVMWAARQVGQLPGASIHLPAFA 548
Query: 177 ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVD 236
S + + L M +T + +I + + I LF D+ ++ G A
Sbjct: 549 PFSLAFLTLAVLCMTLWRTLL--FRAIALPLLAIGLFGAASGPKFDVAVAPGGEAAAYRG 606
Query: 237 KNTL-ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFL 295
++ + P F QW A A V+K
Sbjct: 607 EDGRLAVLAARPNLFAAEQWLRADADGRPAAAAVRK-----------------------S 643
Query: 296 CIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQ 355
K+ CVG + ++ + C +DI++T + K C +++ + L+
Sbjct: 644 ACDKAACVGRLADGRTLSLVVDRAAFAEDCLRADIIVTPL--FAPKGCAAQIVLDRDALK 701
Query: 356 KQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
K G++ + + P + + PW+
Sbjct: 702 KTGAVTLAMTPAGLTRAAARSL------EEDRPWSP 731
Score = 47.5 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
++ PF A T I+ ARL PPS + PG +DF +++ + +G + + + E
Sbjct: 171 VRRAPPFEAGTYIKLKARLLPPSRASLPGGYDFARDAWFARLGGVGNALGRIETLAAPEP 230
Query: 65 H 65
Sbjct: 231 A 231
>gi|260426889|ref|ZP_05780868.1| competence protein [Citreicella sp. SE45]
gi|260421381|gb|EEX14632.1| competence protein [Citreicella sp. SE45]
Length = 680
Score = 143 bits (361), Expect = 4e-32, Method: Composition-based stats.
Identities = 58/338 (17%), Positives = 122/338 (36%), Gaps = 41/338 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ ++ G+ + + + W IS + S +
Sbjct: 365 GFQMSFAATVALVTVFGWL----RDRGAERNAPRWMRPVISVVVSSATASL--------- 411
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + + HF+ I YGL+AN++++PI+ VV+P ++A LL+ LD + +M L
Sbjct: 412 -ATAPVAMAHFNLISHYGLVANLVSVPIMGMVVVPMAVVAALLLPFGLDWLALWLMKPAL 470
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSF-VTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
D I+ +A +S P + + LL+ + R G + + +
Sbjct: 471 DWILFVARTVSGWEGSLGHVLAPGPMVLPLLALGGLLLCLWQGRFRFAGLVPVAL---AA 527
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ S PD+LI++ G LV + +N + F+ W
Sbjct: 528 ALWSASARPDVLIADTGALVGAMTENGRALSRERGAGFLAGIWLE--------------- 572
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
N + +++ + V R C S++++
Sbjct: 573 -----NDGQAGGQEEAAALWPPGAEERTARITLAGLRVTHLQGSRAAQAFGGCDGSELVV 627
Query: 333 TTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSND 370
+++ C+ + PE L+ G++ + + P
Sbjct: 628 SSVDIPEIPGCD---IYDPERLRATGAVAVWLTPQGPR 662
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 53/135 (39%), Gaps = 12/135 (8%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
A T+ L+PP G A PG FDF +++ + A+GY + ++ E +
Sbjct: 154 AAGQTVILTGHLAPPGGAAEPGGFDFRRHAWFLRLGAVGYTRTPVLLLEPPEG-----GQ 208
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSF 124
+ + ++A + A A+ + + L +A++LAI L
Sbjct: 209 HVLRARMWLSARVQAALPGESGAFAAAIMTGDRSGMGQETLDALRHSNLAHLLAISGLHM 268
Query: 125 VVIPAGLIAILLMIL 139
++ + ++L
Sbjct: 269 GLLAGFVFGATRLLL 283
>gi|241762544|ref|ZP_04760619.1| ComEC/Rec2-related protein [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|241372872|gb|EER62559.1| ComEC/Rec2-related protein [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 859
Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats.
Identities = 70/392 (17%), Positives = 137/392 (34%), Gaps = 36/392 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPK-MIY 60
+ I ++ + L P P +F + + + P I+
Sbjct: 481 MMIGRRAVSLRLVAAAAMLILLIQPENILSP-----SFQLSFAAVGTVIALAEAPIISIF 535
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
W K I + + + A S + HFH YG +ANILAIP
Sbjct: 536 GDRREAGWLKKTALIIAEIIIGGVMV------EAVVSPITLYHFHQSGFYGALANILAIP 589
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETS 179
+ +FV IPA +A+L ++ + V + +++ IAH ++ + I
Sbjct: 590 LTTFVTIPAEGLALLTDLIGCSAPFWWVTDQSIRLLLAIAHYVASLPMAGFMLPMIGAWL 649
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
+ ++ +L + KT+ R G + + + ++++ P PD +IS G +A N
Sbjct: 650 CLFMMASWLWLGLWKTSWRLWGVVPLVLGVLMIILNP---RPDWVISRDGKTIAFKTDN- 705
Query: 240 LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
P FI W + ++ D +E+ + + + L +
Sbjct: 706 ----PKQPYQFI---WPEKDSYSQDQIANLIGFDQEEEKRLFGTNLCQKGFCEIALAQQH 758
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
+ K + C +D +I++ + L I +L+K+G
Sbjct: 759 YNLLAIKG--------KAAGLSPEECSQNDWVISSG-YLPASCRPKRLKIDRCLLEKRGG 809
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
+ S + I + + H PW +
Sbjct: 810 --LVFYGKSPFLRRPVMIASYSANDQH-PWMR 838
Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 45/239 (18%), Positives = 91/239 (38%), Gaps = 16/239 (6%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
A I +L+ P P +D+ ++++ ISA G+ P ++ + +
Sbjct: 296 GLEAGAKIAVRVKLTAPMPAQIPAGYDYAEIAWFQRISATGHVLDQPVIL--EKPVLSGF 353
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA-------NILAIPIL 122
++SI Q I +G A+ F+ I +A ++L++ +
Sbjct: 354 SLIVASIHQRLTRHIIEKLGARSGGVAAAFVTNDIGSISESDTVAMRKAGLTHLLSVGGM 413
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI-AHRISVAHNEFCIGRIPETSFV 181
V+ A ++ I + +L+L P+ V+ + L +I A I + + IP +
Sbjct: 414 HIGVVIAAVMFITIRLLALS--PYLVLHFPLRMIAACNAALIGMLYTFVAGCEIPTVRSM 471
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP---YSFSPDLLISEKGNLVALVDK 237
F+L ++ ++IL P S S L + G ++AL +
Sbjct: 472 LTAF-FILFGMMIGRRAVSLRLVAAAAMLILLIQPENILSPSFQLSFAAVGTVIALAEA 529
>gi|330994166|ref|ZP_08318094.1| ComE operon protein 3 [Gluconacetobacter sp. SXCC-1]
gi|329758633|gb|EGG75149.1| ComE operon protein 3 [Gluconacetobacter sp. SXCC-1]
Length = 708
Score = 143 bits (360), Expect = 5e-32, Method: Composition-based stats.
Identities = 45/355 (12%), Positives = 128/355 (36%), Gaps = 37/355 (10%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
+ ++ ++ F ++ ++ + W + + + + L + A ++
Sbjct: 375 QMSMAAVMALVAG---FDALRPVLSAWGHDVMWMRRVGARMARPLLASVLA------GSA 425
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
+ HF + + ++AN+LA+P++S ++P GL+++LLM L + + M WG+ +
Sbjct: 426 CLPVGMAHFGTVQPWFVLANLLAVPLMSVWIMPWGLVSLLLMPLGAEKLALAPMGWGIGV 485
Query: 156 IIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
+ +AH ++ + + V + +R +G++ + + ++ +
Sbjct: 486 VAWLAHLVAGLPVARVSVPAMGGGGLVLFFAGLCWLCLWAGRVRLLGALPVVLAVLSPWV 545
Query: 215 FPYSFSPDLLISEKGNLVALVDKNTLIS-NYSNPPSFIFSQWKSALITPFHEAPHVQKED 273
P +L++ +V +V +++ ++P F+ +W+ P ++
Sbjct: 546 ---GRMPVVLVAPDARMVGVVAGGQVLTGPGTHPDPFVLREWQRVTGLRAGLLPVEGRQG 602
Query: 274 LQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILIT 333
+ + C + IV +L + C + +++
Sbjct: 603 R--------------------VACRNGICRVAGQGGDIVLLLAARMPDAALCLGARVVV- 641
Query: 334 TIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFP 388
C + L ++G+ + + + A + P
Sbjct: 642 --NLHGQAGCPGVGRVGRFDLWREGAYALYFRGGDGLEMRTDRATRGARPWVMRP 694
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 71/191 (37%), Gaps = 11/191 (5%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
A T+ A L+PP+ PA PG +D +++ G++ G ++ ++ + +
Sbjct: 160 AGDTLSARALLAPPAFPAMPGGYDAQRRAWFGGLAGYG--RALERVTSAHPRGPSGMAAW 217
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY-------GLIANILAIPILSFV 125
+ +++Q IR + A+ L I +A++LA+ L
Sbjct: 218 LRTLRQGLAQRIRTALPGPRGTIAATVLTGEDGVIDAETREAFADAGLAHLLAVAGLHLA 277
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
++ ++A++ M L+L + W I +A ++ G I+
Sbjct: 278 IVMGLVMAVVRMGLALSEHA--ALFWPCRQIAGVAALLAGGGYVVLTGAHLPAQRSLIMA 335
Query: 186 EFLLMVFCKTN 196
++
Sbjct: 336 GLAVVALLAGR 346
>gi|254510419|ref|ZP_05122486.1| competence protein [Rhodobacteraceae bacterium KLH11]
gi|221534130|gb|EEE37118.1| competence protein [Rhodobacteraceae bacterium KLH11]
Length = 671
Score = 143 bits (359), Expect = 6e-32, Method: Composition-based stats.
Identities = 58/349 (16%), Positives = 129/349 (36%), Gaps = 45/349 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ ++A G ++ W ++ + S + I
Sbjct: 365 GFQMSFAATTALVAAFGGLREYGRLPG-----PKWLRPVLALVMSSAIAGI--------- 410
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + HF+ + YGL+AN+L++P++ VV+PA ++A LL ++ I VM GL
Sbjct: 411 -ATAPIGAAHFNTMSHYGLVANLLSVPVMGTVVVPAAVVAALLAPFGVEWIALYVMGAGL 469
Query: 154 DIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
I+ +A +S + P+ + L ++ + R +G + +
Sbjct: 470 RWILAVAQWVSGLEGARGYVTSPPDFVLPVLAAALLWLILWQGRARWLGVGPALFAVAM- 528
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ P+ LI+E G LV ++ + + F+ + W
Sbjct: 529 --WGQGHRPEALIAETGGLVGVMTEQGRAVSKPKGSGFVATVWLE------------NDG 574
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLS-CQLSDIL 331
D ++ ++ + + ++FL I+ V ++ C+ I+
Sbjct: 575 DSTTQSNAATRWPDAGGEIQRFL----------LGDKEIIHVTGKRAARGYDECRQDQIV 624
Query: 332 ITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKS 380
+ + + C + P+ L++ GSL ++ + + S
Sbjct: 625 VAPVSLTLSGPCR---VYDPDALRETGSLALSKGHLFTSTELSGQRLWS 670
Score = 66.4 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/257 (15%), Positives = 86/257 (33%), Gaps = 14/257 (5%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ + A LSPP GP PG FDF ++++ + A+GY I
Sbjct: 141 LSLHGDRVHLSPGQRVMTTAHLSPPQGPVEPGGFDFRRHAWFQQLGAVGYTRVPVLTIAP 200
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IA 114
+++ ++++ + + + +RA + A+ + L +A
Sbjct: 201 AQAGRD--GVRVTAWRMAISDHVRAILPGEAGGFAAAVTTGDRSGMGQASLEMLRASNLA 258
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD-IIIHIAHRISVAHNEFCIG 173
++LAI L ++ + + L +P + + + A + + G
Sbjct: 259 HLLAISGLHMGLLTGFVFVACR--IGLSTVPPIALRLPVRKLAALAALMAATIYLFLSGG 316
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP--DLLISEKGNL 231
+ +V L V + ++ + I++ SP + + L
Sbjct: 317 NVATERAFVMVCVMLGAVLLDRRAISLRAVAVAALIVLALRPETLLSPGFQMSFAATTAL 376
Query: 232 VALVDKNTLISNYSNPP 248
VA P
Sbjct: 377 VAAFGGLREYGRLPGPK 393
>gi|188584408|ref|YP_001927853.1| ComEC/Rec2-related protein [Methylobacterium populi BJ001]
gi|179347906|gb|ACB83318.1| ComEC/Rec2-related protein [Methylobacterium populi BJ001]
Length = 753
Score = 143 bits (359), Expect = 6e-32, Method: Composition-based stats.
Identities = 51/338 (15%), Positives = 112/338 (33%), Gaps = 27/338 (7%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + + + + S + + + + + + +
Sbjct: 397 SFQMSFGAVAGLIACAPLLDGRVFRTDSPSRIARAASWLATAVVGTLATTLV--AQIATA 454
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F HF + +GL+ N L +P++S V+PA ++ +L +LD + +M + ++
Sbjct: 455 PFATYHFQTMQPFGLVGNALTLPLVSLAVMPAAVLGMLAYPFALDRPVWWLMGLAVRGML 514
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
I+ I+ + +P + + + ++ + + + + + L
Sbjct: 515 DISAWIAGFGQANVV--LPAFGTGALALLAVALLVATLPVSRLRLLALLPAGLGLALAAS 572
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEK 277
D+ I G A+ K+ + PP FI QW A D +
Sbjct: 573 PTRYDIYIDRDGAGAAVRGKDGRLVVLGRPPGFILEQWLKA------------DGDGRRP 620
Query: 278 NQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRD 337
+ R + C V ++ K C +DILI+ R
Sbjct: 621 ESVAGAVGPR---------CDRLGCTILALDGRAVALVTDKRAFPEDCARADILIS--RL 669
Query: 338 INTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVK 375
C L+ L QG+ I + + +
Sbjct: 670 RAPPGCAAPLIADRSFLAAQGATAIRLGATGPEVASTR 707
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 25/58 (43%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ I ARL PP A PG +DF +Y++GI A+G ++ E
Sbjct: 173 RAAQTVRPGDAIRATARLLPPPEAARPGGYDFARDAYFRGIGAVGSLVGKVEVGPPPE 230
>gi|84515590|ref|ZP_01002952.1| competence protein [Loktanella vestfoldensis SKA53]
gi|84510873|gb|EAQ07328.1| competence protein [Loktanella vestfoldensis SKA53]
Length = 688
Score = 142 bits (358), Expect = 9e-32, Method: Composition-based stats.
Identities = 60/359 (16%), Positives = 124/359 (34%), Gaps = 49/359 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ ++ + + F++ + A +
Sbjct: 362 GFQMSFAATIALVAVFRALRGAKLHRLPRWTRP---------VMSVFVSSLVAGL----- 407
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + + HF+ + YGLIAN++++P++ +V+PA ++A L L L I VM GL
Sbjct: 408 -ATAPYAAAHFNIMSHYGLIANLISVPLMGVLVMPAAVLAACLWPLGLAWIGLAVMEPGL 466
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVT-IVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
I+ +A + N P + + + + L ++ + R G + +I
Sbjct: 467 RWILFVAQTTAAQPNAVSHVIAPPGAVLPILTLALLWLILWQGRARFAGLAFAALAFVI- 525
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ P LL+++ G L+ ++ + SF W P + +
Sbjct: 526 --WQQGTRPALLVADDGGLIGVLGPEGRSLSKPTGGSFSAGIWLENDGAPVAQDIAAARG 583
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLS-CQLSDIL 331
+Q + IV V + + L C +D+L
Sbjct: 584 GVQRDGR---------------------VVTAMLGEWRIVQVSGKTALAALQGCGGADVL 622
Query: 332 ITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
I D + C+ + L++ G+L + + + I S + PW
Sbjct: 623 IVNQVDEVARPCH---VYDLTGLRRTGALAMDLTATGDLR-----IETSRARAGNRPWN 673
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 107/276 (38%), Gaps = 20/276 (7%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ T + LSPP+GPA PG FDF +++ G+ A+GY + ++ +
Sbjct: 147 YRPGTVLMMTGHLSPPAGPAEPGGFDFQRHAWFLGLGAVGYTRN--PVLRLAAPAAPDAM 204
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG-------LIANILAIPILS 123
+I +++ + ++ + A A+ + + G +A++LAI L
Sbjct: 205 MRIFALRMAISRAVQEAMPGEAGAFAAALMTGDRSGMGQDGLAALRAANLAHLLAISGLH 264
Query: 124 FVVIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHI---AHRISVAHNEFCIGRIPETS 179
++ + A++ L+L + + + +I + A ++++ R +
Sbjct: 265 MGLLTGFVFAVVRYGLALVPAVALRLPTKKIAAVIALIVGAFYLALSGGNVATER----A 320
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS-PDLLISEKGNLVALVDK- 237
FV + V + ++ + + G + I +++ + + + LVA+
Sbjct: 321 FVMVAVMLVAVLLGRRALTLRGVAIAAIIVLVWQPEALTGPGFQMSFAATIALVAVFRAL 380
Query: 238 -NTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ + S + S+L+ AP+
Sbjct: 381 RGAKLHRLPRWTRPVMSVFVSSLVAGLATAPYAAAH 416
>gi|295689579|ref|YP_003593272.1| comEc/Rec2-like protein [Caulobacter segnis ATCC 21756]
gi|295431482|gb|ADG10654.1| ComEC/Rec2-related protein [Caulobacter segnis ATCC 21756]
Length = 722
Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats.
Identities = 54/307 (17%), Positives = 107/307 (34%), Gaps = 44/307 (14%)
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ + F ++HF+ + V+GL AN+ P+ SFV++P I LL L V WG
Sbjct: 442 GLATAPFAMQHFNRVAVWGLPANLAVAPLSSFVIMPFLAIGTLLEPFGLGGPFLAVAGWG 501
Query: 153 LDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
+D ++ +A+ + AH + P V + +++ K +R IG+ M +
Sbjct: 502 VDAMVDVANGFADAHGAQRIVASAPPQVLVIAFLGLMILCLWKGRLRWIGAPM----ALA 557
Query: 212 LFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
+ +P PD I+ G A+ + + ++ F W
Sbjct: 558 VALWPRPVPPDAWIAADGATAAVRSGDAAVLLRTDAKRFGAELWARRRGL---------- 607
Query: 272 EDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLK-----RKDMIRLSCQ 326
+ K C + V + + + + C
Sbjct: 608 ----------------TPATWSLYACDKRICTPALGAPVRLSLAWSRGTPDAETLSGLCV 651
Query: 327 LSDILIT--TIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIEN 384
S++++ LC ++L+T E + G+ E+ I+ +
Sbjct: 652 NSEVVVIRGPAPVRTPPLCEDTVLLTAEDFSQGGAAELY------HRGDGWRIVWAQPLR 705
Query: 385 LHFPWTK 391
PW++
Sbjct: 706 GERPWSR 712
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 60/196 (30%), Gaps = 10/196 (5%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYS-IPKMIYSSES 64
+ D I A L PP PA PG +DF +++ I +G+ +
Sbjct: 167 GESDTPAPGQAIRLKAMLGPPPPPAAPGSYDFARDAWFDSIGGVGFVIGEMEPASLDPPP 226
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANIL 117
+++ + S I +G + + H I +A+IL
Sbjct: 227 LRLRLAMAVNAFRWSLAQRILDRMGPTSGGIGAAMVTGHEAWITQEQTDAMRASGLAHIL 286
Query: 118 AIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
+I L ++ + + L + P+ + I A ++V G P
Sbjct: 287 SISGLHMAIVGGFVFGAVR--LGVAAWPWLALRAPGKKIAAGAGLVAVLGYLVISGAPPP 344
Query: 178 TSFVTIVVEFLLMVFC 193
I +
Sbjct: 345 AERAAITASVAFLAIL 360
>gi|149204800|ref|ZP_01881763.1| competence protein [Roseovarius sp. TM1035]
gi|149141769|gb|EDM29822.1| competence protein [Roseovarius sp. TM1035]
Length = 672
Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats.
Identities = 54/344 (15%), Positives = 123/344 (35%), Gaps = 48/344 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ ++ G+ W + + L + ++ +
Sbjct: 364 GFQMSFAATVGLVAVFGWLR-------------DAGWSRGPRWLRPVLAVVISSAVAGAA 410
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ HF+ +GL+AN++++P++ +V+PA ++A LL+ L LD I VM GL
Sbjct: 411 TAPV--AAAHFNQYAQFGLLANLVSVPLMGVLVMPAAVLATLLLPLGLDWIALRVMELGL 468
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFV-TIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
I+ +A ++ P + + + L +V + R +G + + + + +
Sbjct: 469 RWILTVADWVAALDGARVPVVAPGPYVLPLLALGALFIVLWQGRGRILGVLPVMVAVAL- 527
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ + P +++S+ G L+ ++ + N F+ W
Sbjct: 528 --WGAADRPVMIVSDTGGLIGIMTEAGRALNKPTGGGFVADNWLE--------------- 570
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
+ +E+ + V V K + C +++
Sbjct: 571 ---NDGDDASREVAFARWSEDLA----------LAHGVRVMAGKAATDMPDFCDGVMLVV 617
Query: 333 TTI-RDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVK 375
++ D ++TPE L+K GSL + + +
Sbjct: 618 MSVTPDPPPAQHRDCQIVTPETLRKTGSLALHLDKAGPRLVSAR 661
Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/234 (15%), Positives = 83/234 (35%), Gaps = 17/234 (7%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
A + A L P GP PG FDF +++ GI A+GY + + + + +
Sbjct: 154 AGQRVMMTAHLGPAGGPVEPGGFDFQRHAWFLGIGAVGYTRTPVLRLEAGQG-----GQP 208
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFV 125
+ + + +++ + A A+ + + + L +A++LAI L
Sbjct: 209 LFRARMALSQHVQSRLPGQTGAFAAAIMTGDRAGLSLVTLEAMRVSNLAHLLAISGLHMG 268
Query: 126 VIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
++ + A + ++ + + A L + + G + +V
Sbjct: 269 LLAGFVFAAFRLGFAAVPRLGLRLPAKKLSAFLALVAGAGYLGLSG--GNVATERAFVMV 326
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP--DLLISEKGNLVALVD 236
L V + + ++ + I+++ P + + LVA+
Sbjct: 327 AVMLGAVILERRAFSLRAVAVAAIIVLVLQPEALLGPGFQMSFAATVGLVAVFG 380
>gi|254487263|ref|ZP_05100468.1| competence protein, putative [Roseobacter sp. GAI101]
gi|214044132|gb|EEB84770.1| competence protein, putative [Roseobacter sp. GAI101]
Length = 680
Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats.
Identities = 59/389 (15%), Positives = 131/389 (33%), Gaps = 50/389 (12%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + +K A I + P PG F +F++ ++ G+ ++
Sbjct: 337 LMLGRKALSIRAVAIAATIVLVLRPEALMGPG-FQMSFAATTALVAVFGWLRNV------ 389
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ T+ K ++ + +F++ A + + HF+ I YGL+AN+ ++P+
Sbjct: 390 ---NLTFGQKWLAPVVSTFISSAIAGL------FTAPVGAAHFNTIAHYGLVANLASVPL 440
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ +V+PA + A++L D VM GL I+ +A ++ + P +
Sbjct: 441 MGVMVMPAAVAALVLSPFGFDPAALWVMGLGLRWILGVAAFVADIKGAQGFVKGPGPWVL 500
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLI 241
++ L + + +G + + + P +LI++ G +V ++
Sbjct: 501 PLLASGFLWLLLWQGW--LRLAGLGAVLAGFVLWHGATRPAVLIADTGGIVGVITPQGRA 558
Query: 242 SNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSF 301
+ FI W + + +
Sbjct: 559 LSKPKGAGFIALNWLENDGDGADQPAAAARWGDR-------------------------- 592
Query: 302 CVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLE 361
+ ++I KR C I++ ++ L P L+ G++
Sbjct: 593 -MALAGQEIIHLSGKRAVAAFGGCHSGQIVVASVEVEGDIG--ECTLFDPISLRTTGAVS 649
Query: 362 ITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
++ + K + + A L W
Sbjct: 650 LS---EVDGRIKTRTARQMAGARLWTNWP 675
Score = 69.1 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/235 (17%), Positives = 88/235 (37%), Gaps = 14/235 (5%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
+ LSPPSG PG FDF +++ + A+GY + ++ +E+ +
Sbjct: 154 EPGLRVMTTGHLSPPSGAVEPGGFDFQRHAWFARLGAVGYTRT--PLLGVAEASDGHAGL 211
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSF 124
+ ++ + I+ + AS I L +A++LAI L
Sbjct: 212 AVFRLRMAASAHIQGTLPGDIGGFASAITTGDRSAISQMALYNLRASNLAHLLAISGLHM 271
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI-AHRISVAHNEFCIGRIP-ETSFVT 182
++ A + L ++L L +P+ + W I A ++ + G + E +F+
Sbjct: 272 GLLCAVVFGALRVLLCL--VPWVALRWPTRSIAAAGALIVASGYLALSGGNVATERAFIM 329
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP-YSFSPDLLISEKGNLVALVD 236
+ V ++ + + + +++L + + LVA+
Sbjct: 330 VSVALGALMLGRKALSIRAVAIAATIVLVLRPEALMGPGFQMSFAATTALVAVFG 384
>gi|162145890|ref|YP_001600348.1| DNA uptake protein [Gluconacetobacter diazotrophicus PAl 5]
gi|161784464|emb|CAP53994.1| putative DNA uptake protein [Gluconacetobacter diazotrophicus PAl
5]
Length = 707
Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats.
Identities = 56/356 (15%), Positives = 118/356 (33%), Gaps = 48/356 (13%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
+ ++ A G+ + P + E + W + + +
Sbjct: 380 QMSLAAVMAL--AAGFEATRPALSRLREQPDWWRRPALHVAHLALA-------SLLAGGA 430
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
++ HF + + ++AN+LA+P+++ ++P G+IA+LLM D + M WG+ +
Sbjct: 431 TVPVVMTHFGTLQPWFVLANLLAVPLMALWILPWGVIALLLMPWGADPVALVPMGWGIRL 490
Query: 156 IIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
++ +AH +S + +P ++ + R G + + +
Sbjct: 491 VLGLAHAVSGWPAARVMVPAMPSWGLAAWMLGLCWLCLWTRRWRWWGVAPMALALAAPVL 550
Query: 215 FPYSFSPDLLISEKGNLVALVDKN-TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKED 273
PD+L+S G VA+ D I + + S W+ AL P P
Sbjct: 551 VA---RPDVLLSPDGRAVAVRDGAVLRIGPHPGADKAVESDWQQALALPLASLPQADG-- 605
Query: 274 LQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILIT 333
+ C + C V L+ C +L+T
Sbjct: 606 -------------------RLACRDE----ACRMDGGRV-RLRLSAAAPAECAGVTLLVT 641
Query: 334 TIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ + C + + + + G+ + + P ++ PW
Sbjct: 642 LV--PMDQGCPAARTLDGLTVWQGGAQAVFLRP------DGPHVVSDRGVRGARPW 689
>gi|254466483|ref|ZP_05079894.1| competence protein [Rhodobacterales bacterium Y4I]
gi|206687391|gb|EDZ47873.1| competence protein [Rhodobacterales bacterium Y4I]
Length = 689
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 53/288 (18%), Positives = 115/288 (39%), Gaps = 33/288 (11%)
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
HF+ +P YGL+AN+LA+P++ VVIPA ++A+ L+ L+ I VM WG+D I+ +A
Sbjct: 414 HFNTLPHYGLLANLLAVPVMGTVVIPAAVLALCLLPAGLEGIGLTVMRWGMDWILAVART 473
Query: 163 ISVAHNEFCIGRIPETSFVTIVV-EFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+S P+++ + + + V + + + L+ + + P
Sbjct: 474 VSGFEGAVSHVTAPDSAVLPLFASGMVFAVIWQGR---LRLAGLLPAAAALWIWSGAERP 530
Query: 222 DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSS 281
++I+ G L+ +++ + + F W + + ++
Sbjct: 531 PVIIASSGGLIGVMEAEGRALSRAKGQGFTAGIWLENDGDAATQPEAAARWKVR------ 584
Query: 282 LKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLS-CQLSDILITTIRDINT 340
+ V +V ++++++ S C+ DI+++
Sbjct: 585 ----------------DGALPVWHGAGVRLVHAPGKRELLQASNCKEGDIVVSAAAGAAP 628
Query: 341 KLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFP 388
C L++TP IL++ GS+ + P + + + P
Sbjct: 629 GGC---LVLTPGILRQTGSIAVR---PDGRLLTARAATGMRLWSGWQP 670
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/228 (18%), Positives = 83/228 (36%), Gaps = 15/228 (6%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S+T + P + A L PP GPA PG FDF +++K + +GY +P ++
Sbjct: 139 ISLTGQDAVPPPGALVMTTAHLLPPQGPAEPGGFDFRRHAWFKQLGGLGYTR-VPVLLAG 197
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IA 114
+ + + + Q I G + A+ + L +A
Sbjct: 198 APGDSVPVERLRREMAQHLQQRIPGETGGF----AAALTAGDRSGVGEQTLAALRKSNLA 253
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD-IIIHIAHRISVAHNEFCIG 173
++LAI L ++ + A + ++ L +P + W + + A + G
Sbjct: 254 HLLAISGLHMGLLTGFVFAAVRVLFCL--VPPLALRWPVRKLAALAALIAGAGYLLLSGG 311
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ +V L V + ++ + I++L SP
Sbjct: 312 NVATERAFVMVAVMLGAVLLNRRAITLRAVALAALIVLLRRPESLLSP 359
>gi|209543802|ref|YP_002276031.1| ComEC/Rec2-like protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209531479|gb|ACI51416.1| ComEC/Rec2-related protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 695
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 56/356 (15%), Positives = 118/356 (33%), Gaps = 48/356 (13%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
+ ++ A G+ + P + E + W + + +
Sbjct: 368 QMSLAAVMAL--AAGFEATRPALSRLREQPDWWRRPALHVAHLALA-------SLLAGGA 418
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
++ HF + + ++AN+LA+P+++ ++P G+IA+LLM D + M WG+ +
Sbjct: 419 TVPVVMTHFGTLQPWFVLANLLAVPLMALWILPWGVIALLLMPWGADPVALVPMGWGIRL 478
Query: 156 IIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
++ +AH +S + +P ++ + R G + + +
Sbjct: 479 VLGLAHAVSGWPAARVMVPAMPSWGLAAWMLGLCWLCLWTRRWRWWGVAPMALALAAPVL 538
Query: 215 FPYSFSPDLLISEKGNLVALVDKN-TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKED 273
PD+L+S G VA+ D I + + S W+ AL P P
Sbjct: 539 VA---RPDVLLSPDGRAVAVRDGAVLRIGPHPGADKAVESDWQQALALPLASLPQADG-- 593
Query: 274 LQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILIT 333
+ C + C V L+ C +L+T
Sbjct: 594 -------------------RLACRDE----ACRMDGGRV-RLRLSAAAPAECAGVTLLVT 629
Query: 334 TIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+ + C + + + + G+ + + P ++ PW
Sbjct: 630 LV--PMDQGCPAARTLDGLTVWQGGAQAVFLRP------DGPHVVSDRGVRGARPW 677
>gi|302383255|ref|YP_003819078.1| ComEC/Rec2-related protein [Brevundimonas subvibrioides ATCC 15264]
gi|302193883|gb|ADL01455.1| ComEC/Rec2-related protein [Brevundimonas subvibrioides ATCC 15264]
Length = 726
Score = 141 bits (354), Expect = 3e-31, Method: Composition-based stats.
Identities = 46/310 (14%), Positives = 97/310 (31%), Gaps = 32/310 (10%)
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
+ + F I+HF+ V+GLIAN+ PI F+++PA + LL + L
Sbjct: 431 VAVTASLVAGVATGPFAIQHFNRTAVFGLIANLATSPIADFIMMPALALGALLEPIGLGG 490
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
V G+D ++ + H +S I P+ + L + + +R G
Sbjct: 491 PFLWVAGRGVDAMLAVGHWVSGLPGAVQTIASAPDYVLPISFLGVLFVCLWQGRLRWAGL 550
Query: 203 IMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITP 262
+ + +P + +P + I + G A + F W
Sbjct: 551 PFV----CAVLIWPRAPTPTVWIGDGGTNAAFSRSGQAVVIRPGVREFATDLWSRRRGLT 606
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
E + ++ + +
Sbjct: 607 LSERAEEGWLCERYSCAPVSGTAPVAVWWG--------------------TTAPDPEALT 646
Query: 323 LSCQLSDIL-ITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSA 381
+ C+ + ++ + + C+ L++ + G++E+ P + SA
Sbjct: 647 VLCESAPLVSVRATVSALPEACDGRLVLDGVDHARGGAVELWRTPQGWRA------VWSA 700
Query: 382 IENLHFPWTK 391
PW++
Sbjct: 701 DVRGDRPWSR 710
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 40/229 (17%), Positives = 84/229 (36%), Gaps = 12/229 (5%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYS-IPKMIY 60
L T + DP + I A ++PP PA PG +DF ++++ + + + I
Sbjct: 161 LRATVRGDPPVPGSAIRLFAIVNPPPPPASPGAYDFGRGAWFERLGGTAFALAETRSTIL 220
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------I 113
+ + ++++I+ I +G A+ H I L +
Sbjct: 221 PTAPWSLRMAMRVNAIRFGLAQRIVHRLGERTGGIAAAMTTGHETWIQRDDLDAMRDSGL 280
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
A+IL+I L ++ G A L+ + P+ + + +A ++V G
Sbjct: 281 AHILSISGLHMAIV--GGFAFFLVRFGVAAWPWLALRVSGKKVAAVAGVVAVWSYLILSG 338
Query: 174 RIPET--SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ +T + F ++ + I G + + ++IL
Sbjct: 339 APAPAERAAITASIAFAAILLDRQAISMHGLAVAAMVVLILQPEAIVTP 387
>gi|298291807|ref|YP_003693746.1| ComEC/Rec2-related protein [Starkeya novella DSM 506]
gi|296928318|gb|ADH89127.1| ComEC/Rec2-related protein [Starkeya novella DSM 506]
Length = 793
Score = 140 bits (353), Expect = 3e-31, Method: Composition-based stats.
Identities = 61/370 (16%), Positives = 140/370 (37%), Gaps = 50/370 (13%)
Query: 30 AFPGLFDFNFSSYYKGISAI---GYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA 86
+F++ I+A G+F + P + ++++ +
Sbjct: 408 VLDPGAQMSFAATLALIAAYERYGHFVTTPPGTAEDAVWLRRPARYVAALVLA------- 460
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
+ + + HF + LIAN+ A+P +SF+V+PAGL+ +LM D+ +
Sbjct: 461 --SLAAGLATAPYAAFHFQRLAPLSLIANLAAMPAVSFIVMPAGLVGAVLMPFGWDDRAW 518
Query: 147 GVMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
+M WG+D++ IA ++ + + + +P S V + + + + +T + + ++
Sbjct: 519 RLMGWGIDLMRDIADFVARIPGADRGVSAMPMASLVLLSLALMALCLSRTRLILLAPVL- 577
Query: 206 GITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS-----FIFSQWKSALI 260
I+ L+ PDL + + VA+ + ++ + S F QW SA
Sbjct: 578 --AILALWIAAREPRPDLFVDGEARTVAVRGPDGALAVMGDRTSGLADRFAVEQWLSADG 635
Query: 261 TPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDM 320
++ ++ KE++++ C +V + + D
Sbjct: 636 ---------------DRARAGSKELIQAA------ACDPLGCTLPLVGGALVALSRHPDS 674
Query: 321 IRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKS 380
+ C+L+ +L+T ++ + + P + G + ++ + +
Sbjct: 675 LEDDCRLARVLVTPF-TAPSECAATVIHLDPR--KAGGGVAGYRTEEGE----LRLVSAN 727
Query: 381 AIENLHFPWT 390
A PW
Sbjct: 728 APYGG-RPWQ 736
>gi|323137199|ref|ZP_08072278.1| ComEC/Rec2-related protein [Methylocystis sp. ATCC 49242]
gi|322397557|gb|EFY00080.1| ComEC/Rec2-related protein [Methylocystis sp. ATCC 49242]
Length = 757
Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats.
Identities = 53/366 (14%), Positives = 128/366 (34%), Gaps = 42/366 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTY-- 91
F +F++ I+ + + + +++ ++++ + + G
Sbjct: 394 SFQLSFAAVAALIAVYEWRGDYLGRSRARPVGPS-MRGRLAELREALVERLVHGPGAALL 452
Query: 92 ----GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
+++ + F+ FH + Y L+ N L + I+ F +P LI +L LD +
Sbjct: 453 ATLCATSATASFMANDFHELSPYVLVGNPLTLAIIEFFAVPCALIGAVLYPFGLDGFVWR 512
Query: 148 VMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIG 206
+ G+D++I++A I+ A + + V + + L V +T + + I
Sbjct: 513 YLKIGIDLVIYLAGLIASAPGASLHVKAFAPWAIVFLALAVLSAVLWRTW--SLRATAIP 570
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHE 265
+ ++ L DL + G+ A + + P F QW
Sbjct: 571 LALVGLLGAKNGTGFDLAVPPTGDSAAFRAASGEIALLGKRPSVFASEQWL--------- 621
Query: 266 APHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSC 325
+ + + + CVG IV ++ + C
Sbjct: 622 --------------RADADSRAAADAGAGVACDDLGCVGRLFDGRIVALVNERGAFLEDC 667
Query: 326 QLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENL 385
+ I++T + + C ++I L + G++ + + + + + + +
Sbjct: 668 ARAAIIVTPLH--APEGCAAPIVIDRRKLVETGAISLRLKGEKIEWTRARGV------DE 719
Query: 386 HFPWTK 391
PW++
Sbjct: 720 DRPWSQ 725
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 40/258 (15%), Positives = 80/258 (31%), Gaps = 18/258 (6%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
T+ F A + ARL PP+ A PG +DF +Y+ + +G +++ +
Sbjct: 169 TRGDPSFSAGDFVALKARLMPPARAALPGGYDFARDAYFARLGGVGNALGRIEVMPPPDP 228
Query: 65 HN--TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IAN 115
+ I + + + I A A+ + + I +
Sbjct: 229 APISLRFFAAIDRARNALALRVYRTIDGDAGAIAAAMVTGKRDFLSGNAKDLIRRAGIFH 288
Query: 116 ILAIPILSFVVIPAGLIAILLMILSLDN-----IPFGVMAWGLDIIIHIAHRISVAHNEF 170
I+ I + ++ +L++ P A GL I+ I + I+
Sbjct: 289 IITISGMQMTLVAGIFFVGFRRLLAMSQTLALNYPIKKWAAGLAILGAILYDIATGSRVG 348
Query: 171 CIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGN 230
+ T + + V F N+ +I L + L +
Sbjct: 349 TERALVMTLIMLVAVLFDRASLSMRNLALAAFFIIAFEPEALLGASF----QLSFAAVAA 404
Query: 231 LVALVDKNTLISNYSNPP 248
L+A+ + S
Sbjct: 405 LIAVYEWRGDYLGRSRAR 422
>gi|326402243|ref|YP_004282324.1| hypothetical protein ACMV_00950 [Acidiphilium multivorum AIU301]
gi|325049104|dbj|BAJ79442.1| hypothetical protein ACMV_00950 [Acidiphilium multivorum AIU301]
Length = 697
Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats.
Identities = 61/369 (16%), Positives = 127/369 (34%), Gaps = 46/369 (12%)
Query: 30 AFPG-LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI 88
A PG F +FS+ I+ GY + + I+++ A
Sbjct: 370 AVPGPSFQMSFSAVLALIA--GYEAVGRRFDTEGAGWRGRLGRHIAAL---------AFT 418
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
++ F F + Y ++AN++A+P+ + VV+PAG++A++LM L L+ +
Sbjct: 419 SLLAGGASMPFAAYQFQQVQPYYILANLIAVPLTALVVLPAGMVALVLMPLHLEALALAP 478
Query: 149 MAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
M WG+ ++ +A + + H IG P + + L+ + +R G + I
Sbjct: 479 MGWGIAAMLAVARFVGQLPHALIVIGPSPGWPVALLGLGMALLGLLRGRVRLAGLAPVVI 538
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKN-TLISNYSNPPSFIFSQWKSALITPFHEA 266
+ + +PD+L+S +LVA+ D I P + +QW+
Sbjct: 539 GLAGMML---GRAPDVLVSPTASLVAVRDGAVVRILETRRPDQYTLAQWRPVFA------ 589
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
+ + C V L C
Sbjct: 590 ------------HDRVAVARAADICAGGRCRFDHG---------RVLYLADATAAENGCG 628
Query: 327 LSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFI--IKSAIEN 384
+ ++I+ +I + + G++ + +++ ++ +
Sbjct: 629 DARVVISPEPLRGACRARGRYVIDRFSVWRDGAIALRFAGGRVRLTTDRWVQGVRPWVAA 688
Query: 385 LHFPWTKHR 393
W + R
Sbjct: 689 WPKRWHRRR 697
Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/218 (17%), Positives = 75/218 (34%), Gaps = 12/218 (5%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
A ++ A L PS PA+PG + F ++ G+ A+G+ K+ + + W
Sbjct: 161 LAAGDSVRVRAFLFAPSRPAYPGGWSFGRDQFFSGLGAVGFAVG--KLDVTRVAAPGWGG 218
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIK-------HFHCIPVYGLIANILAIPILS 123
+ + A T G +A++ GL A+ILA+ L
Sbjct: 219 ALRRLRETIAARVLTAMPPTTGPIAATLLTGFEESIPARERQAFITAGL-AHILAVAGLH 277
Query: 124 FVVIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
++ L A+ + + + V A + + A + A I E S
Sbjct: 278 IGIVMGALFALARFCVGWSEFLLLRVPAKVIASAVAFAGGVVYAALTGFHVPI-ERSLAM 336
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ L +V + + G + ++++
Sbjct: 337 AALVLLGIVAGRRALSLRGLAVAAFVLMLIEPQAVPGP 374
>gi|307942168|ref|ZP_07657519.1| competence protein [Roseibium sp. TrichSKD4]
gi|307774454|gb|EFO33664.1| competence protein [Roseibium sp. TrichSKD4]
Length = 708
Score = 139 bits (350), Expect = 6e-31, Method: Composition-based stats.
Identities = 68/386 (17%), Positives = 126/386 (32%), Gaps = 28/386 (7%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
I G+A L F F +F++ ++A + +S T
Sbjct: 340 SVAIAGLALLIMAPENLFHPGFQMSFAAVLCLVAAYEALRE--RKSGKEKSGGRLTAPGP 397
Query: 74 SSIKQSFLNEIRANI---GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ + +++ + + + HF I YGL+ NIL +PI S V +P G
Sbjct: 398 NRGVLTLISKWAGGLILTSLIAGLATGVVGAYHFGRIAPYGLVGNILGMPIFSLVTMPMG 457
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLL 189
L+A+LL+ L + P VM L +I+ +A + + P S +
Sbjct: 458 LLALLLLPFGLASFPVTVMEASLSLILEMARFTANLDAGRGHVVPPPAASAFLLFCGLFG 517
Query: 190 MVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ + +R + + + S PD+ IS G +A D + + S
Sbjct: 518 GLVLRGRLRIAAFLP---AFLGSALWLLSNGPDIQISATGLHLAARDADGVFRLTSTRQG 574
Query: 250 FIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSD 309
F W + D Q++ C+ +F V +
Sbjct: 575 FRNEMWLQREGMDVSTLSELPMADDQKRCDDE-------------GCVVHAFPVNGLANP 621
Query: 310 VIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITI----I 365
+IV + + C +D++IT L + G++ I +
Sbjct: 622 LIVALPRTVSAAIQDCSRADLVITDFDMSGANCTAQ--LFDRSKRAQTGAVSIWLSSMRT 679
Query: 366 PPSNDNDKVKFIIKSAIENLHFPWTK 391
I++A PW +
Sbjct: 680 DEEMQARTGIERIENAKSIPARPWHQ 705
Score = 91.4 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/217 (20%), Positives = 87/217 (40%), Gaps = 14/217 (6%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT- 69
+TI ARL PP+GPA PG +DF+F +Y++ I A G+ + P + + S +
Sbjct: 140 VRVGSTISVRARLFPPAGPAVPGGYDFSFIAYFQKIGASGFAFGKPDEVSGAASRGRVSE 199
Query: 70 -WKKISSIKQSFLNEIRANIGT--YGSASASIFLIKHFH-------CIPVYGLIANILAI 119
+ ++ ++ S + T G+ A++ + H + GL A+ILAI
Sbjct: 200 FMRVLAGVRASLSERLLKFTQTPDAGALVAALLVGNRDHISDETEDVLRQAGL-AHILAI 258
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
L + G ++L+M+L+L P + + + ++ G T
Sbjct: 259 SGLHMALFAGGAFSLLVMLLALS--PRFALIQPIHQFAALGALVAATLYLLISGASVATQ 316
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
I++ + + + + +L P
Sbjct: 317 RSFIMIALVFLGILIGRRGLTLRSVAIAGLALLIMAP 353
>gi|294010831|ref|YP_003544291.1| ComEC/Rec2-related protein [Sphingobium japonicum UT26S]
gi|292674161|dbj|BAI95679.1| ComEC/Rec2-related protein [Sphingobium japonicum UT26S]
Length = 387
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 56/339 (16%), Positives = 116/339 (34%), Gaps = 24/339 (7%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + + A+ P + + W++I L G +
Sbjct: 48 SFQMSFAAVIALVSLGEHPAFRTFVAARDEGMWRRIGRNLAGMLA-----TGLAVELVLA 102
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ HFH + G +AN++AIP+ + VV+P +A+L + + + A LD+++
Sbjct: 103 PIALFHFHKAGMLGSVANLVAIPLTTLVVMPLEAMALLFDLGGWGAPFWWLTARALDLLL 162
Query: 158 HIAHRISVAHNEFCI-GRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+AH ++ + + F I++ L + ++ R G + + + ++ P
Sbjct: 163 LVAHGVASSPWAVVLAPAQSGAVFGLILLGMLWCLLWRSGWRWAGLMPVSACMTMILASP 222
Query: 217 YSFSPDLLISEKGNLVALVDKN-TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQ 275
P +LIS G VAL + + + + A Q
Sbjct: 223 M---PAILISGDGRHVALRTADGGMAMLRARAGGYARDV--MAESAGHDGTLQALTTLPQ 277
Query: 276 EKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTI 335
+ L + + + + RS V + ++ C +DI+++
Sbjct: 278 ARCSPDLCAVRLRGGG-------RYWNLLLTRSSVKI----DNAILARDCAHADIVVSDR 326
Query: 336 RDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKV 374
R L L + G L I + + K
Sbjct: 327 RLPGA-CRPRWLKADRRFLARTGGLAIDLDHGAIRGAKA 364
>gi|163742787|ref|ZP_02150172.1| competence protein [Phaeobacter gallaeciensis 2.10]
gi|161384042|gb|EDQ08426.1| competence protein [Phaeobacter gallaeciensis 2.10]
Length = 690
Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 46/330 (13%), Positives = 120/330 (36%), Gaps = 36/330 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ I G + L+ + A +
Sbjct: 364 GFQMSFAATTALIVVFGGLRDRLTPTGPGW---------LRMAAGVVLSSLIAGV----- 409
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + F HF+ I YGL+AN+LA+P++ +V+PA ++++ L + + +M G+
Sbjct: 410 -ATAPFGAAHFNMISHYGLLANVLAVPVMGALVVPAAVLSLCLAPVGASWVGLALMDLGI 468
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
I+ +A+ ++ +P + +V L++ + + + + ++
Sbjct: 469 GWILFVANWVAALDGAQGAVPMPPALVLPLVALGGLLLGLWRGRLRLLGVPVLLGGALM- 527
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKED 273
+ S P++L++ G +V ++ + + + +W
Sbjct: 528 -WHGSPRPEVLVAPNGGIVGVLTAEGRALSRAKGHGYAAERWAE------------NDGS 574
Query: 274 LQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLS-CQLSDILI 332
L+ + + + L + + ++ V+ + L+ C +++I
Sbjct: 575 LRTQAEGAQLWQLVAGPEAPGKSVTAYLAAT---DQRLIHVIGKAAAEALTVCAADEVVI 631
Query: 333 TTIRDINTKLCNVSLLITPEILQKQGSLEI 362
+ C L+ + L + GS+++
Sbjct: 632 SAKSVAPVGDC---LVFDADALHRLGSVQM 658
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 51/139 (36%), Gaps = 12/139 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ + + A L PP GP P FDF ++++ + A+GY +I
Sbjct: 143 LSLPEGARVPRLGDRVMTTAHLMPPQGPVEPHGFDFRRHAWFQQLGAVGYTRVPVLIINR 202
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IA 114
S + ++Q IR+ + AS IP L +A
Sbjct: 203 SPRDLP-----VEQLRQRLSTGIRSQMPVATGGFASAITTGDRSAIPQVALEALRASNLA 257
Query: 115 NILAIPILSFVVIPAGLIA 133
++LAI L ++ +
Sbjct: 258 HLLAISGLHMGLLAGVVFG 276
>gi|87200046|ref|YP_497303.1| ComEC/Rec2-related protein [Novosphingobium aromaticivorans DSM
12444]
gi|87135727|gb|ABD26469.1| ComEC/Rec2-related protein [Novosphingobium aromaticivorans DSM
12444]
Length = 760
Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 62/336 (18%), Positives = 122/336 (36%), Gaps = 24/336 (7%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + + AI F+S + ++ + ++ L + + +
Sbjct: 399 SFQMSFAAVIAIVAFHSAAPVRGFLAGERH---GGLARLARNVLLLLATGLVI--ELALM 453
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ HFH VYG +AN++AIP+ +FV +P IA+LL + L + ++ LD+++
Sbjct: 454 PIGLFHFHRAGVYGSLANVIAIPLTTFVTMPLIGIALLLDLAGLGGPAWWLVETSLDLLL 513
Query: 158 HIAHRISVAHNEFC-IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+AH ++ + S++ V L + +R G + +
Sbjct: 514 ALAHFVADRPGAVTMLPPGDRWSYLVFVAGMLWLALWTGRVRLWGLLP---AFAAALSMA 570
Query: 217 YSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQ 275
+ +PD+L++ G VA+ + L+ + FI P + +
Sbjct: 571 LTPTPDILVTGDGRHVAIAGEGAELLVLRAGRGDFIRENLLELAGMEGETRPLDEWRGAR 630
Query: 276 EKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTI 335
++R + L + R+DV + I +C+ SDI+I
Sbjct: 631 CGEDFCAASLMRGGRHFAIL-------MARSRNDV------DEMDIAAACERSDIVIADR 677
Query: 336 RDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDN 371
R +T L L G L I +
Sbjct: 678 RLPHT-CRPKLLKADRAFLAMTGGLSIDLSRRRTRT 712
>gi|296117483|ref|ZP_06836070.1| putative DNA uptake protein [Gluconacetobacter hansenii ATCC 23769]
gi|295976004|gb|EFG82795.1| putative DNA uptake protein [Gluconacetobacter hansenii ATCC 23769]
Length = 814
Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 48/296 (16%), Positives = 108/296 (36%), Gaps = 29/296 (9%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ HF + + ++AN++A+P+ + ++P + A++LM + LD++ M WG ++I
Sbjct: 526 PVGMAHFADVGAWFVLANLIAVPLAALWIMPCAMGALVLMPVGLDSLALVPMGWGNAVVI 585
Query: 158 HIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTF 215
+AH ++ + ++P + R G + I I ++ +
Sbjct: 586 WLAHHVAAWPGAHVGVPQMPMWGLGLYFAGLCWLCLWTRPTWRICGVMPIAIAMVTPWMV 645
Query: 216 PYSFSPDLLISEKGNLVALVD-KNTLISNYSNPPSFIFSQWKSALITPFHEA-PHVQKED 273
+PD++I +G ++A+VD L++ + SF+ W L + D
Sbjct: 646 ---RAPDVIIPAQGRMLAVVDGPRLLVAPKGHVDSFVLRDWVRVLDRRVVIVDDDMTTPD 702
Query: 274 LQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILIT 333
+ Q+ + + R + C D +V +
Sbjct: 703 GRLTCQAGMCVLARGGHRIMMRLRDGTAAASCAGMDGVVILSG----------------- 745
Query: 334 TIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPW 389
+R + C + L + G+ + + + ++ A PW
Sbjct: 746 ALRAVGQGACTDVTPVDYLTLWRSGAQALYLTSHHGVVVRSDRQVRGA-----RPW 796
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/213 (14%), Positives = 68/213 (31%), Gaps = 17/213 (7%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY-SSESHNTWT 69
I A L PP P PG +D +++ GI + M ++ + +
Sbjct: 257 LSPGMWITVRALLRPPMPPDLPGGYDAQRRAWFAGIGGSARALDVAVMTAGTAGAWSVRL 316
Query: 70 WKKISSIKQSFLNEIR-------ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ + I Q ++ + + T GS S F +A++LA+ L
Sbjct: 317 GRVRARIAQRVMDVLPDQRGAMAVTLLTGGSGGLSARTRADFADSG----LAHLLAVAGL 372
Query: 123 SFVVIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
++ IA++ +L+L + W + +A + G
Sbjct: 373 HIGIVMGLGIAVVRFVLALSERASLW---WPCRQVAAVAGLVLGCGYVLLTGAHLPAQRG 429
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
++ + R + + + + +
Sbjct: 430 LVMAAVATLAILTGR-RVLSLRSLALAMGGMLL 461
>gi|189183210|ref|YP_001936995.1| hypothetical protein OTT_0303 [Orientia tsutsugamushi str. Ikeda]
gi|189179981|dbj|BAG39761.1| hypothetical protein OTT_0303 [Orientia tsutsugamushi str. Ikeda]
Length = 682
Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats.
Identities = 65/309 (21%), Positives = 124/309 (40%), Gaps = 14/309 (4%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I + P I L P P F +F + IS + ++ +
Sbjct: 341 IKRGVVPLRLVGLAAIIILLFNPEYIMHP-SFQLSFIAVISLISCYELQSITQQHKFNVD 399
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ +S I+ F + I ++ S + + +I HF+ P Y ++AN+L +P+ +
Sbjct: 400 QKD-----ILSKIQLFFESNIYSS--AIASIATAPIVIYHFYSFPNYSVLANLLIVPLTA 452
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVT 182
F V+P LI++LLM +++N + G+D+II IA IS + + G I + S +
Sbjct: 453 FWVMPLTLISLLLMPFNIENYFLLLAGQGVDVIIKIAKIISTLPYAVTYFGHIDDVSLLI 512
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT--L 240
+ FL +V R I + I II + PDL+ + + + + + N+
Sbjct: 513 YLFGFLWLVIWHKPWR---MIGVVIIIIAIIRTALVSKPDLVFNGELTALGIKNSNSKFE 569
Query: 241 ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKS 300
I SN P F + W + + + + ++ +I+ C+
Sbjct: 570 IHASSNMPEFFLNYWSNWYGQNEILFRNSAIKTFNHRIITNSGKIVAIRFKNTDECVPAD 629
Query: 301 FCVGCHRSD 309
+ +D
Sbjct: 630 LIISVIPND 638
>gi|218506605|ref|ZP_03504483.1| hypothetical protein RetlB5_02844 [Rhizobium etli Brasil 5]
Length = 186
Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 16/182 (8%)
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFH 264
+ + +IL P S PDL+ISE G LV LV + SN NPP FIF QW+ AL+ P H
Sbjct: 1 LAVATLILLILPGSRPPDLVISEDGGLVGLVAATAMASNRENPPDFIFDQWQRALVLPTH 60
Query: 265 EAPHVQKE----------------DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRS 308
P + D Q + ++++ + +F C+KK++C+ +
Sbjct: 61 HPPKMLDGPAIPPQGEDRRVKLSRDQQNEARTAMVAAAAGGEANRFSCVKKAWCIARLGN 120
Query: 309 DVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPS 368
+V V+ + +C++ +I++T++R + + + L T E L++ GS+E+
Sbjct: 121 GHVVAVIDNAAYLGPACEVGEIVVTSVRLRFDRCRSGASLFTGETLRRTGSVELRFAQTG 180
Query: 369 ND 370
+
Sbjct: 181 LE 182
>gi|254420656|ref|ZP_05034380.1| Competence protein [Brevundimonas sp. BAL3]
gi|196186833|gb|EDX81809.1| Competence protein [Brevundimonas sp. BAL3]
Length = 698
Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats.
Identities = 48/301 (15%), Positives = 96/301 (31%), Gaps = 28/301 (9%)
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ F ++HF+ +YGL+AN+ P+ FV++PA + L L L V WG
Sbjct: 415 GLATGPFAMQHFNRTAMYGLLANLGTAPVADFVLMPALALGAALEPLGLGGPFLAVAGWG 474
Query: 153 LDIIIHIAHRISVAHNEF-CIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
+D+++ I + + P+ + L + + +R +G + ++
Sbjct: 475 VDLMLAIGAWTAGLPGAVQTVASAPDYVLPMAFLGVLFVCLWQGRLRWLGLPLAAAVLV- 533
Query: 212 LFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
+P + +PDL I + G A + + +F W + P
Sbjct: 534 ---WPRAPTPDLWIGDGGTNAAFHHQAQAVVIRPGVRAFAVDLWSRRRGLTTADRPEAGW 590
Query: 272 EDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL 331
+ + E R+ +V V + SC
Sbjct: 591 TCDRSSCRPETPEAGPVALWWGREAPDAEQMADLCRAASVVSVRAAVAALPASCD----- 645
Query: 332 ITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
L++ + G++E+ D + +A PW +
Sbjct: 646 -------------GRLVLDGVDFTRGGAVELW-----RDGVDRWKAVWTADVRGDRPWAR 687
Query: 392 H 392
Sbjct: 688 Q 688
Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/225 (16%), Positives = 75/225 (33%), Gaps = 10/225 (4%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYS-IPKMIY 60
L T + DP + A L+PP PA PG +DF +++++G+ I + ++
Sbjct: 136 LRATVRGDPPRPGEAVRLFAILNPPPAPASPGAYDFGRNAFFQGMGGIAFALGETRRLDL 195
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------I 113
S ++S + + I A +G A+ H I + +
Sbjct: 196 PSAPWRLRLEMAVNSARYALAERIVARLGERTGGIAAAMTTSHETWISQEDMDVMRDSGL 255
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
A+IL++ L ++ G L + P+ + + +A +V G
Sbjct: 256 AHILSVSGLHMAIV--GGFVFFAARLGVAAWPWLALRVPGKKVAALAGLTAVGAYLVVSG 313
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
P I + + ++L P +
Sbjct: 314 APPPAERAAITASIAFLAILLDRQAVTMHGLAVAAFVVLAIQPEA 358
>gi|163736566|ref|ZP_02143985.1| competence protein [Phaeobacter gallaeciensis BS107]
gi|161390436|gb|EDQ14786.1| competence protein [Phaeobacter gallaeciensis BS107]
Length = 689
Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats.
Identities = 47/330 (14%), Positives = 120/330 (36%), Gaps = 36/330 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ I G + L+ + A +
Sbjct: 364 GFQMSFAATTALIVVFGGLRDRLTPTGPRW---------LRMAAGVVLSSLIAGV----- 409
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + F HF+ I YGL+AN+LA+P++ +V+PA ++++ L + + +M G+
Sbjct: 410 -ATAPFGAAHFNMISHYGLLANVLAVPVMGALVVPAAVLSLCLAPVGASWVGLALMDLGI 468
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
I+ +A+ ++ +P + +V L++ + + + + ++
Sbjct: 469 GWILFVANWVAALDGAQGAVPMPPALVLPLVALGGLLLGLWRGRLRLLGVPVLLGAALI- 527
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKED 273
+ S PD+L++ G +V ++ + + + +W
Sbjct: 528 -WHGSPRPDVLVAPNGGIVGVLRAEGRALSRAKGHGYAAERWAE------------NDGS 574
Query: 274 LQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLS-CQLSDILI 332
L+ + + + L + + ++ V+ + L+ C +++I
Sbjct: 575 LRTQAEGAQLWPLVAGPEAPGKSVTAYLAAT---DQRLIHVIGKAAAEALTVCAADEVVI 631
Query: 333 TTIRDINTKLCNVSLLITPEILQKQGSLEI 362
+ C L+ + L + GS+++
Sbjct: 632 SAKSVAPVGDC---LVFDADALHRLGSVQM 658
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 51/139 (36%), Gaps = 12/139 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ + + A L PP GP P FDF ++++ + A+GY +I
Sbjct: 143 LSLPEGARVPRIGDRVMTTAHLMPPQGPVEPHGFDFRRHAWFQQLGAVGYTRVPVLIINR 202
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IA 114
S + ++Q IR+ + AS IP L +A
Sbjct: 203 SPRDLP-----VEQLRQRLSTGIRSQMPVATGGFASAITTGDRSAIPQVALEALRASNLA 257
Query: 115 NILAIPILSFVVIPAGLIA 133
++LAI L ++ +
Sbjct: 258 HLLAISGLHMGLLAGVVFG 276
>gi|307295057|ref|ZP_07574899.1| ComEC/Rec2-related protein [Sphingobium chlorophenolicum L-1]
gi|306879531|gb|EFN10749.1| ComEC/Rec2-related protein [Sphingobium chlorophenolicum L-1]
Length = 690
Score = 136 bits (342), Expect = 6e-30, Method: Composition-based stats.
Identities = 54/340 (15%), Positives = 118/340 (34%), Gaps = 24/340 (7%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + + A+ P+ + + ++I+ L G +
Sbjct: 351 SFQMSFAAVVALVALGEHPRFRAFLLARDEGMGRRIARNLAGMLA-----TGLAVELVLA 405
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ HFH V G +AN++ IP+ + VV+P A+L + + + A LD+++
Sbjct: 406 PIALFHFHKAGVLGSVANLVVIPLTTLVVMPLEAAALLFDLCGWGAPFWWLTARALDLLL 465
Query: 158 HIAHRISVAHNEFCIGRI-PETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+AH ++ + + + +F I+ L + ++ R G + + + ++ P
Sbjct: 466 LVAHGVASSPWAVVLAPVQSGLAFGLILFGMLWCLLWRSRWRWAGLMPVTAGVTMILATP 525
Query: 217 YSFSPDLLISEKGNLVALVDK-NTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQ 275
P +LIS G VA+ + ++ +L P Q
Sbjct: 526 A---PAILISGDGRHVAIRTAQGGMAMLRERAGHYMREAMTESLGHDGM--PEAMAALPQ 580
Query: 276 EKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTI 335
+ L + +++ + RS + + ++ C +DI+++
Sbjct: 581 ARCSPDLCAVRLRGGG-------RNWNLLLTRSGMRI----DPAILARDCARADIVVSDR 629
Query: 336 RDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVK 375
R L L G L I + + K +
Sbjct: 630 RL-PRVCRPRWLKADRAYLAATGGLAIDLDHGVIRSVKAR 668
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 65/186 (34%), Gaps = 9/186 (4%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
I ARL PP+ P+ PG +DF +Y+ GI A G ++ + + +
Sbjct: 145 GAIIRFRARLMPPAPPSLPGGYDFARRAYFDGIGATGRALQPISVLRPATAEPPLRARLF 204
Query: 74 SSIKQSF---LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ I + I A + T + + +A++L+I L + A
Sbjct: 205 AHILERAPGQGAGIAAALATGDQGAIAEADAAAMRRSG----LAHLLSISGLHVTALIAA 260
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
+I + + +++L + W L ++ ++ G T + +L
Sbjct: 261 VIFLSMRVMALSRRA--ALDWPLMLVAACGGALAGIGYTLLTGAEVPTVRSCVAALLVLG 318
Query: 191 VFCKTN 196
Sbjct: 319 GLAMGR 324
>gi|148259092|ref|YP_001233219.1| ComEC/Rec2-related protein [Acidiphilium cryptum JF-5]
gi|146400773|gb|ABQ29300.1| ComEC/Rec2-related protein [Acidiphilium cryptum JF-5]
Length = 697
Score = 136 bits (341), Expect = 8e-30, Method: Composition-based stats.
Identities = 60/367 (16%), Positives = 126/367 (34%), Gaps = 46/367 (12%)
Query: 30 AFPG-LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI 88
A PG F +FS+ I+ GY + + I+++ A
Sbjct: 370 AVPGPSFQMSFSAVLALIA--GYEAVGRRFDTEGAGWRGRLGRHIAAL---------AFT 418
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
++ F F + Y ++AN++A+P+ + VV+PAG++A++LM L L+ +
Sbjct: 419 SLLAGGASMPFAAYQFQQVQPYYILANLIAVPLTALVVLPAGMVALVLMPLHLEVLALAP 478
Query: 149 MAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
M WG+ ++ +A + + H IG P + + L+ + +R G + I
Sbjct: 479 MGWGIAAMLAVARFVGQLPHALIVIGPSPGWPVALLGLGMALLGLLRGRVRLAGLAPVVI 538
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKN-TLISNYSNPPSFIFSQWKSALITPFHEA 266
+ + +PD+L+S +LVA+ D I P + +QW+
Sbjct: 539 GLAGMML---GRAPDVLVSPTASLVAVRDGAVVRILETRRPDQYTLAQWRPVFA------ 589
Query: 267 PHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQ 326
+ + C V L C
Sbjct: 590 ------------HDRVAVARAADICAGGRCRFDHG---------RVLYLADATAAENGCG 628
Query: 327 LSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFI--IKSAIEN 384
+ ++I+ +I + + G++ + +++ ++ +
Sbjct: 629 DARVVISPEPLRGACRARGRYVIDRFSVWRDGAIALRFAGGRVRLTTDRWVQGVRPWVAA 688
Query: 385 LHFPWTK 391
W +
Sbjct: 689 WPKRWHR 695
Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/218 (16%), Positives = 79/218 (36%), Gaps = 12/218 (5%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
A ++ A L PS PA+PG + F ++ G+ A+G+ K+ + + W
Sbjct: 161 LAAGDSVRVRAFLFAPSRPAYPGGWSFGRDQFFSGLGAVGFAVG--KLDVTRVAAPGWGG 218
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGLIANILAIPILS 123
+ ++++ + A + A+ L IP + +A+ILA+ L
Sbjct: 219 A-LRRLRETIAARVLAAMPPTTGPIAATLLTGFEESIPARERQAFITAGLAHILAVAGLH 277
Query: 124 FVVIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
++ L A+ + + + V A + + A + A I E S
Sbjct: 278 IGIVMGALFALARFCVGWSEFLLLRVPAKVIASAVAFAGGVVYAALTGFHVPI-ERSLAM 336
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ L +V + + G + ++++
Sbjct: 337 AALVLLGIVAGRRALSLRGLAVAAFVLMLIEPQAVPGP 374
>gi|103486321|ref|YP_615882.1| ComEC/Rec2-related protein [Sphingopyxis alaskensis RB2256]
gi|98976398|gb|ABF52549.1| ComEC/Rec2-related protein [Sphingopyxis alaskensis RB2256]
Length = 719
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 56/357 (15%), Positives = 123/357 (34%), Gaps = 33/357 (9%)
Query: 38 NFSSYYKGISAIGYFYSIPKM-IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+F + ++AI + P M + + +W ++ I + + +
Sbjct: 375 SFQLSFAAVTAIVALHESPAMQAFLARRDESWAFRLGRGIAGLLATGLVVEV------AL 428
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ + HFH +YG +AN++AIP+ +FVV+PA +A+L + L + V L ++
Sbjct: 429 TPIALFHFHKAGLYGALANVIAIPLTTFVVMPAEALALLFDSVGLGAPFWWVAEQALRLL 488
Query: 157 IHIAHRISVAHNEF-CIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
I +AH ++ A + P F + L ++ +T R G I + +L
Sbjct: 489 IALAHSVAGAPGAVTTLPSFPPWGFGLTLFGGLWILLWQTRWRRWGMIPLAAGAAVLLAQ 548
Query: 216 PYSFSPDLLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDL 274
P PDLL++ G +A+ + ++ A + +
Sbjct: 549 P---RPDLLVTGDGRHIAVPLPDGTYALLRDRAGDYVRDSMAEAAGIDAPLGTLADLDHV 605
Query: 275 QEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITT 334
+ + ++ R + + + + ++ +
Sbjct: 606 ECNRDFCR-------WVQGAGAARRVILASRGRDRI-------EGADMAAACAAADVVIS 651
Query: 335 IRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
R + + L I + L + G L + + + + PW +
Sbjct: 652 DRWLPRECAGRWLTIERDSLAETGGLALYLGERPKA-------VATLKSGAEHPWRR 701
Score = 45.2 bits (105), Expect = 0.021, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 31/89 (34%), Gaps = 4/89 (4%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYS----IPKMIYSSESHNTW 68
A I ARL PP + PG +DF +++ GI A+G P ++
Sbjct: 167 AGEAIGVRARLMPPPTASLPGGYDFAQRAWFDGIGAVGTVLGGVVRAPGRGSAAPPLRAR 226
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASAS 97
I I A + T + S
Sbjct: 227 LSAHIHRQVDGSAGGIAAALVTGDRGAIS 255
>gi|148284699|ref|YP_001248789.1| ComEC/Rec2 family protein [Orientia tsutsugamushi str. Boryong]
gi|146740138|emb|CAM80336.1| ComEC/Rec2 family protein [Orientia tsutsugamushi str. Boryong]
Length = 682
Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 85/179 (47%), Gaps = 6/179 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
+ S + + +I HF+ P Y ++AN+L +P+ +F V+P L+++LLM +++N
Sbjct: 417 SSAFASIATAPIVIYHFYSFPNYSVLANLLIVPLTAFWVMPLTLVSLLLMPFNIENYSLL 476
Query: 148 VMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIG 206
+ G+D+II IA IS + + G I + S + + FL +V R I +
Sbjct: 477 LAGQGVDVIIKIAKIISTLPYAVTYFGHIDDVSLLLYLFGFLWVVIWHKCWR---MIGVV 533
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNT--LISNYSNPPSFIFSQWKSALITPF 263
I II + PDL+ + + + + + N+ I SN P F + W +
Sbjct: 534 IIIIAIIRAALVSKPDLVFNGELTALGIKNANSKFEIHASSNIPDFFLNYWSNWYGQDE 592
>gi|158423824|ref|YP_001525116.1| ComEC/Rec2-related protein [Azorhizobium caulinodans ORS 571]
gi|158330713|dbj|BAF88198.1| ComEC/Rec2-related protein [Azorhizobium caulinodans ORS 571]
Length = 949
Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats.
Identities = 51/355 (14%), Positives = 122/355 (34%), Gaps = 33/355 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
+F++ ++A + + + + + ++ + ++ +
Sbjct: 409 GTQMSFAATLALVAAYEQWTGLR----TRPAAGPLVLRALARMGLFVAALSMTSVVAGAA 464
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ L HF + + GL++N+ A+P + F+V+P GL+ +LL+ D I + VM G+
Sbjct: 465 TAPYAAL--HFQRLGIMGLLSNLAAMPAVEFLVMPFGLLGVLLLPFGWDFIAWPVMGLGI 522
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
DI++ ++ ++ R T L ++ + + + L
Sbjct: 523 DIMVKVSDVVAALPGADM--RTDWVGAGTAAFATLALLALCLLRGLLRLAAVPCVVAALL 580
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLIS-NYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
PD+LI+ G VA+ + +S + + QW S P
Sbjct: 581 LLGAPPRPDVLIAANGQTVAVRGGDGRLSIAGARSSRLVAEQWLSKEADP---------- 630
Query: 273 DLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILI 332
+ C+ + ++++ + + +C + +++
Sbjct: 631 -----------RTAEVPDLAQGFACDARRCMAPLPDGTKIVLVRKAEALPAACGEASLVV 679
Query: 333 TT--IRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENL 385
T N C L TP+ + + G+L + P + + +
Sbjct: 680 TAEVASTENISACAARL-FTPQDMSRTGTLALFHRPRQAAGEPGTPHRVAGVPQP 733
Score = 60.6 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 75/207 (36%), Gaps = 12/207 (5%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ + P A T + +ARL PP A PG +DF + +++GI A+G+ P++I
Sbjct: 182 LSVARGSAP-AAGTPVSVLARLLPPMEAALPGGYDFGRNIWFRGIDAVGFGLGRPRIIAL 240
Query: 62 SESHN--TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGL 112
+E + + ++Q+ IRA + + A ++ I
Sbjct: 241 AEPAPFSVRVGRLVDEVRQAVGARIRAVLSGTAADIAVALVVGDRASISPQVEESMRVSG 300
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI 172
+ ++L+I L ++ L ++ L P + + + +
Sbjct: 301 LTHVLSISGLHMAMVAGTLFFLVRG--GLAAFPPLALGFPIKSLAAATALAGSGVYLLLS 358
Query: 173 GRIPETSFVTIVVEFLLMVFCKTNIRH 199
G ++ +L+
Sbjct: 359 GNDWPAQRSFWMLAIVLVGVIAGRAAL 385
>gi|83858369|ref|ZP_00951891.1| ComEC/Rec2 family protein [Oceanicaulis alexandrii HTCC2633]
gi|83853192|gb|EAP91044.1| ComEC/Rec2 family protein [Oceanicaulis alexandrii HTCC2633]
Length = 680
Score = 132 bits (332), Expect = 8e-29, Method: Composition-based stats.
Identities = 66/370 (17%), Positives = 126/370 (34%), Gaps = 47/370 (12%)
Query: 26 PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR 85
P PG F +FS+ I++ + ++ I +K +
Sbjct: 350 PESVIEPG-FQMSFSAVAALIASFDAYKRWRP-------EGGFSTSLIGKVKDALAG--L 399
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
+ A+ F I HF + YGLIAN+LA+P+ +F V+PAG A++ L L+
Sbjct: 400 SATSLIAGAATGAFAIFHFQRMAAYGLIANLLAMPVFTFWVMPAGGAALVFSPLGLERPF 459
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV-TIVVEFLLMVFCKTNIRHIGSIM 204
VM GL ++ IA+ S + + V + F +V +R G +
Sbjct: 460 LWVMDQGLRRVLDIAYWASSLDGAVVGANAADPALVALYGLGFACLVIGLGWMRVTGGAL 519
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT--LISNYSNPPSFIFSQWKSALITP 262
I I I + P ++I++ G ++A + + F +
Sbjct: 520 IAIAIGLFMV---QTPPQMMITDGGVVLARFEGGGEEFAVSDRRRGRFDARVFLQ----- 571
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIR 322
+ + S R L C G +++ V + +
Sbjct: 572 --------------------RAGVSSTPERAALRCDTLGCTGRTAEGLLLAVTGSAESLE 611
Query: 323 LSCQLSDILITTIRDINTKLCN-VSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSA 381
C +D+++ + +L++ + G +E + D V+ A
Sbjct: 612 SDCAYADLIVFDGEVSAWRKRRCRALVLDDAARAELGGMEFWV----QDGQVVRMRSAQA 667
Query: 382 IENLHFPWTK 391
+ W +
Sbjct: 668 M-RRERLWVR 676
Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 63/192 (32%), Gaps = 13/192 (6%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I D F I+ ARL+ PS P G +D ++++ I GY S +
Sbjct: 135 IRAGLDGFEPGDAIQVRARLARPSAPVAAGGYDPARAAWFDQIGLTGYAISDLERAEIGA 194
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP-------VYGLIANI 116
S ++ + +++ A A+ L + + +I
Sbjct: 195 SVPP--GLILARFRWRLSEHLQSRTDPRTGAVAAALLTGERARVSREDAEALRLSGLGHI 252
Query: 117 LAIPILSFVVIPAGLIAILLMILSLDNIPFGVMA----WGLDIIIHIAHRISVAHNEFCI 172
LAI L + G ++ + ++ L +I + + ++
Sbjct: 253 LAISGLHMALFAGGAYWLIRLGFAMWEPWARAHDPRKPAALGALIAASLYLVISGAAVST 312
Query: 173 GRIPETSFVTIV 184
R +FV ++
Sbjct: 313 QRAYIMAFVVLM 324
>gi|332185896|ref|ZP_08387643.1| comEC/Rec2-related domain protein [Sphingomonas sp. S17]
gi|332014254|gb|EGI56312.1| comEC/Rec2-related domain protein [Sphingomonas sp. S17]
Length = 702
Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats.
Identities = 63/335 (18%), Positives = 120/335 (35%), Gaps = 26/335 (7%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + I+AI + P M +H W W + + +
Sbjct: 375 SFQLSFAAITAIIALHEHPVMRRWFGAHPDWRWSIVRQGGALLVTGLVVEAALM------ 428
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
I HFH +YG ANI+AIP +F+ +P ++A+L L L + ++ W L ++
Sbjct: 429 PIAIFHFHKAGLYGAFANIVAIPWTTFIAMPIEMLALLFEPLGLAGPLWHLLGWALGALL 488
Query: 158 HIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+AH ++ + +F T V L + +T R +G +I + + + P
Sbjct: 489 ALAHYVAALPGAAIALPVASCWAFATAVGGGLWLALWRTRARWMGVPLILMGSVEMLMAP 548
Query: 217 YSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQE 276
SPDL+++ G A+ + + + + E Q E +
Sbjct: 549 ---SPDLIVTGDGRHAAIRTDHGMALLRERAGDY--------MRMTLAEMSGSQAELVAL 597
Query: 277 KNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIR 336
+ + Q R+ + + + V ++ C+ DI+I R
Sbjct: 598 SDHGRCGPDVCVTQLRRAGRLWRIGATRSGYNLPWVSLI-------ALCRRVDIMIADRR 650
Query: 337 DINTKLCNVSLLITPEILQKQGSLEITIIPPSNDN 371
L + L+K G + + PP +
Sbjct: 651 LPEA-CQPRWLKLDAPTLRKAGGATLWLDPPRVET 684
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 2/136 (1%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
I RL PP+GP PG +DF +++++GI A G ++ ++ +S+ + +
Sbjct: 168 PGAVIRLRVRLMPPAGPVAPGGYDFARAAWFQGIGATGRGFAPITILRASQQEDGLRQRL 227
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI 132
I + + + GL A++L++ L + ++
Sbjct: 228 SRRITERVAGSAGGIAAALATGDVGAIGQADAEAMRRAGL-AHLLSVSGLHITAVVGIVM 286
Query: 133 AILLMILSLDNIPFGV 148
I + +L+L V
Sbjct: 287 TITIRLLAL-WPWLAV 301
>gi|114569947|ref|YP_756627.1| ComEC/Rec2-like protein [Maricaulis maris MCS10]
gi|114340409|gb|ABI65689.1| ComEC/Rec2-related protein [Maricaulis maris MCS10]
Length = 702
Score = 130 bits (326), Expect = 4e-28, Method: Composition-based stats.
Identities = 61/350 (17%), Positives = 127/350 (36%), Gaps = 41/350 (11%)
Query: 50 GYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR------ANIGTYGSASASIFLIKH 103
G+ S W + + L +IR + ++ + F H
Sbjct: 385 GFQMSFSAAAALVAVARVWQQSRSGGDARGVLGQIRLFVAGLSTTSLVAGSATAAFAAFH 444
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
FH I +GL N+L +PI S +V+PAG++ ++L+ + LD IPF M GL +++ +A +
Sbjct: 445 FHRIATFGLAGNLLVMPIFSLLVMPAGVLGLVLIPIGLDAIPFAAMEAGLSLMLDLAGHV 504
Query: 164 SVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
+ + + F+L++ + +R G +++ + + + PD
Sbjct: 505 ANWPGAQRTVAAASGGVLAAFSIGFVLLILMRGPMRGAGGLVMAAALAV---WTLMPQPD 561
Query: 223 LLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSL 282
L ISE G ++A + + F + A
Sbjct: 562 LFISENGLVLARDGHGEWVVSDRRTSRFAARVFLEARG---------------------- 599
Query: 283 KEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL 342
+ P+++ + + + ++V L C SD++++ R +
Sbjct: 600 ---VAGPTPQRWQALCDPYGCSTRINGLVVTRLDHVADWATDCARSDVIVSAARIPGWIV 656
Query: 343 CN-VSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
+ + P+ L GS I + + + + + PWT+
Sbjct: 657 SQCQAAIFDPDRLATTGSQVIHLGANG-----IARVQSARPPGVVRPWTQ 701
Score = 45.9 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 76/216 (35%), Gaps = 10/216 (4%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
A I A L+ P A PG +DF F + + I A GY + + ++
Sbjct: 172 AGDPIAIRAVLAAPRSSAVPGGYDFAFHAGFSDIVATGYAIAPAAAGPAVTG--DRLARR 229
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFV 125
I+ I+ S IR + A A+ L I + + ++LAI +
Sbjct: 230 IARIRASLSAHIRDRMAPRPGALAAALLTGDRAHIAARDVEALRRAGLGHVLAISGMHMA 289
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
++ G+ + ++LS + +A + + G IP + V
Sbjct: 290 LLAGGVFFAIRLLLSAVTPWARRHDPAIPA-AGMALVFAAGYLILSGGTIPTQRAFIMTV 348
Query: 186 EFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
L V K + ++ I + +++ +P
Sbjct: 349 SVLGAVILKRRALSMHTLAIAVIAVLVLQPQAVITP 384
>gi|329850632|ref|ZP_08265477.1| comEC/Rec2-related domain protein [Asticcacaulis biprosthecum C19]
gi|328840947|gb|EGF90518.1| comEC/Rec2-related domain protein [Asticcacaulis biprosthecum C19]
Length = 537
Score = 129 bits (324), Expect = 7e-28, Method: Composition-based stats.
Identities = 63/359 (17%), Positives = 124/359 (34%), Gaps = 42/359 (11%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + +A+ K S W +++ + L+ + + + T + +
Sbjct: 206 FQMSFCATAALLALAETVKPDIREISVPLWVRAFQAALNGAKLSLVASFVAT---LATTP 262
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F I +F+ VY L++N+L PI +FVV+P + L L I + GL +I
Sbjct: 263 FAIAYFNRFSVYSLLSNLLEAPITAFVVMPCLALGTALAATPLGWIFLRIAGGGLWLIKE 322
Query: 159 IAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
IA S + + + P + + + + +R G ++ + +P
Sbjct: 323 IAAWTSDLPYAVVTLSSAPGFVLAVATMGLIWVCLMRGKVRWAGLVVAS----SIVWWPR 378
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEK 277
PD+ I +G A+ + F F QW
Sbjct: 379 VAPPDIWIDPQGGNAAVRLADGAYVLRPKVRQFGFEQWTQHY------------------ 420
Query: 278 NQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGV-----LKRKDMIRLSCQLSDILI 332
L+ + + + R +LC K CV + V VG + C S +++
Sbjct: 421 ---GLRTLDEAARDRDYLC-KGYGCVPLPSNPVKVGFWFGNKPPNDKRLAELCAASTLVV 476
Query: 333 TTIRDIN-TKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWT 390
+ C+ I+ ++ G++E+T N+ I + + W+
Sbjct: 477 MRNPVGDWPATCSTVNRISAGDFRRLGAMELT------RNEMGWAIKAAQPLRGNRYWS 529
>gi|326387884|ref|ZP_08209490.1| ComEC/Rec2-related protein [Novosphingobium nitrogenifigens DSM
19370]
gi|326207930|gb|EGD58741.1| ComEC/Rec2-related protein [Novosphingobium nitrogenifigens DSM
19370]
Length = 738
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 56/361 (15%), Positives = 117/361 (32%), Gaps = 36/361 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F+S I+ + P + ++ + + + + +
Sbjct: 362 SFQMSFASVMAIIAVHN---AAPVKRFLAKRDEGRLMRLLRETAMLLASGVVIELTLM-- 416
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ HFH +YG AN++AIP+ +F +PA +A++L + L + V L
Sbjct: 417 ----PIALFHFHRAGIYGAFANLVAIPLTTFTTMPAIALALVLDLAGLGAPAWWVTGKSL 472
Query: 154 DIIIHIAHRISVAHNEFC-IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+ ++ +AH + + +P F ++ L + +R G + + +
Sbjct: 473 EALLWLAHITATMPGAVTMMPTMPGWIFGIMLAGLLWLGLWSGRVRLWGLLPVALG---C 529
Query: 213 FTFPYSFSPDLLISEKGNLVALVD-KNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
+ +PD+LIS G V L L+ + +
Sbjct: 530 AVYAGERAPDVLISGDGRHVGLTGLGPDLVVLRPGRGGYAREALLESAGMSGDVRLLEDW 589
Query: 272 EDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDIL 331
+ + + R + L + + V D + +C SDI+
Sbjct: 590 PGARCNVAFCMVRLARGGRSFALLFARGTGLV-------------DIDQLEAACAASDIV 636
Query: 332 ITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
+ R L +L++ G + I ++ I A PW +
Sbjct: 637 VADRRLPQA-CRPRLLKADLGLLERTGGMTIDLV--------SGRIHTVAENRGEHPWVQ 687
Query: 392 H 392
Sbjct: 688 Q 688
Score = 57.5 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 13/144 (9%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
I ARL PPS P PG +DF +++++GI A G ++ + +
Sbjct: 152 VGAMIAARARLVPPSPPMLPGGYDFAKTAWFQGIGATGSILGDVTVLSPAGPVPS----- 206
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY-------GLIANILAIPILSFV 125
+ ++ + + A +G A A+ I + ++L+I L
Sbjct: 207 LRRVQDALARHVLAQLGGSPGAIAAALASGDRGAIAREDEDAMRDAGLTHLLSISGLHVS 266
Query: 126 VIPAGLIAILLMILSL-DNIPFGV 148
+ AG+ + + +L L I V
Sbjct: 267 AVIAGVYFLTIRLLGLFPWIALRV 290
>gi|84687234|ref|ZP_01015115.1| Putative Competence protein [Maritimibacter alkaliphilus HTCC2654]
gi|84664822|gb|EAQ11305.1| Putative Competence protein [Rhodobacterales bacterium HTCC2654]
Length = 700
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 54/360 (15%), Positives = 118/360 (32%), Gaps = 50/360 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ + G + + + +
Sbjct: 366 GFQMSFAATTALVFVFGALRDVQRGKLPKWARPVFA---------------VVLSSLVAG 410
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + F F+ + YGLIAN++++P++ +V+P ++A LL L L I +M W +
Sbjct: 411 LATAPFSAAIFNRVAHYGLIANVVSVPVMGTLVMPLAVLAALLAPLGLSWIALDLMRWPI 470
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
+ I+ +A +++ P + + ++ L V + + + L
Sbjct: 471 EWILWVAKKVAALDGAVGHVIAPPDAVMPMIALGGLAVILLRGA--GRAAGAVVVVAALA 528
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKED 273
+ + PD+LIS G+L+ + + F W + +
Sbjct: 529 LWTQATRPDVLISPSGSLIGAMTAEGRALTKARGEGFAARSWLENDGDSTDQESAAARMA 588
Query: 274 LQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILIT 333
Q L + + + D + +C ++I
Sbjct: 589 QATDPQFDLPGLTLRLVSGRGA----------------------ADRLEGACASEALVIF 626
Query: 334 TIR--DINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
+ D + CN ++ L + G+L IT+ + A + + PWT+
Sbjct: 627 AAKPLDRYPEGCN---MLDRAALARTGALAITLTADGPR------VTSVAQVSGNRPWTR 677
Score = 55.6 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/211 (18%), Positives = 74/211 (35%), Gaps = 13/211 (6%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
DP P I + LS P GP PG FDF ++++ I A+GY + +E
Sbjct: 153 DPVP-GMRIAVTSHLSGPEGPVEPGGFDFRRMAWFRSIGAVGYTTKPALALAPAERALP- 210
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPI 121
I ++ + ++A I A A+ + +A++LAI
Sbjct: 211 ----IHRLRAAISAAVQAEIPGEAGAFAAAITTGDRSAMGQETVEALRASNLAHLLAISG 266
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
L ++ + L + L+L M + + +FV
Sbjct: 267 LHMGLLVGFVFGTLRLGLALTPGVGVSMDVRKVAAVVALAAGAFYLAMSGGAVSTSRAFV 326
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+ V + ++ + + + + ++IL
Sbjct: 327 MVAVMLVAILVGRRALTLRAVAVAALILLIL 357
>gi|254796699|ref|YP_003081535.1| ComEC/Rec2 family protein [Neorickettsia risticii str. Illinois]
gi|254589945|gb|ACT69307.1| ComEC/Rec2 family protein [Neorickettsia risticii str. Illinois]
Length = 734
Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 5/173 (2%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
+ +A+ + F++ HFH + V G+ AN +AIP SF+VIP +LLM L + +
Sbjct: 449 TSIFATAATTPFVLYHFHYLSVIGVAANAIAIPFTSFLVIPTLAGILLLMPLHDSELLYA 508
Query: 148 VMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIG 206
+++ + I++ + S + F + T+ +V LL++ T R++G + I
Sbjct: 509 LLSTEIKILLSLMESFSHLNLGYFNVQGFSGTTLFVMVTGTLLLLIGTTWKRYLGIMPIA 568
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSN-PPSFIFSQWKSA 258
+ + ++ +S PD+ ISEK + D N N P +FI +W
Sbjct: 569 MGVAMI---KFSPLPDIFISEKNIAIRSQDNNLYFLNAPRIPQNFIAKKWLQY 618
Score = 42.1 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 12/129 (9%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
I A + P G A P +DF Y+ G+ A G ++ S+ + +
Sbjct: 133 GDVINFSAYILPVQGAATPSGYDFAMFQYFSGVRATGRLVGEITVVKSTSHQSVF----- 187
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPILSFVV 126
I++ + + N+ S A I I +++LAI L +
Sbjct: 188 PRIRKVIHEKFKYNLAEIPSEIALALTIGKRDGIDPKINELFRKSGTSHLLAISGLHMGL 247
Query: 127 IPAGLIAIL 135
+ ++L
Sbjct: 248 VGLFFFSLL 256
>gi|197105226|ref|YP_002130603.1| ComEC/Rec2 family protein [Phenylobacterium zucineum HLK1]
gi|196478646|gb|ACG78174.1| ComEC/Rec2 family protein [Phenylobacterium zucineum HLK1]
Length = 714
Score = 126 bits (315), Expect = 8e-27, Method: Composition-based stats.
Identities = 54/305 (17%), Positives = 103/305 (33%), Gaps = 26/305 (8%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
+ + F I+HF+ + +GL+AN+ PI +F+++PA + L L IP
Sbjct: 427 AVSFVAGLATGPFAIQHFNRVSTWGLLANLAVAPISTFLLMPALALGAALAPFGLGRIPL 486
Query: 147 GVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
++++ IA + A + P + V L + + +R G +
Sbjct: 487 EAAGLAIELMNRIAAAAASAPMAQTLVPSAPAWTLAASFVGLLFVCLWRGRLRWAGLPL- 545
Query: 206 GITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHE 265
+ + P +PDL IS G VA+ + + + F W
Sbjct: 546 ---ALSVLWAPRPATPDLWISADGAAVAVREGREAVLLRPDVKLFGAELWARRRGLTPL- 601
Query: 266 APHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSC 325
+S E ++ C + + + + + C
Sbjct: 602 --------------TSEAERDERFDCDRWSCAPGAGAPMRVSAAWNLRRPLKPGRLDALC 647
Query: 326 QLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIENL 385
++++I D + C L++T + GS E+ +D I S
Sbjct: 648 GSAEVVIL-RNDFRPESCGAPLVLTGADFRAGGSAELW-----RRSDGSWRIAWSQDLRG 701
Query: 386 HFPWT 390
PWT
Sbjct: 702 RRPWT 706
Score = 42.9 bits (99), Expect = 0.090, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 61/172 (35%), Gaps = 10/172 (5%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPK--MIYSSESHNTWT 69
+ +A L+PP PA PG +DF ++++ + +G P+ +
Sbjct: 163 APGEGVRVLAILNPPPPPASPGAYDFARDAFFESVGGVGLALRPPEWWTPDTVAPWRLRL 222
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPIL 122
++++++ + I +G A+ H IP + +A+I++I L
Sbjct: 223 TMRVNAVRWALTRRIVETLGPESGGLAAAMTTGHEAFIPPEQVENLRVSGLAHIISISGL 282
Query: 123 SFVVI-PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIG 173
++ A L + + + V + ++ +A
Sbjct: 283 HMAIVGGFTFAAARLAVAAWPWLALRVSGKKVAALVGLAAVGGYLVLSGAPP 334
>gi|304322091|ref|YP_003855734.1| competence protein [Parvularcula bermudensis HTCC2503]
gi|303300993|gb|ADM10592.1| competence protein [Parvularcula bermudensis HTCC2503]
Length = 719
Score = 126 bits (315), Expect = 9e-27, Method: Composition-based stats.
Identities = 54/355 (15%), Positives = 125/355 (35%), Gaps = 38/355 (10%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + ++A+ Y+ + +++ L + ++ + +
Sbjct: 397 FQMSFAAVTALVATYTALEGRLRP------AVTIAGRVRRFVLGLMVTSLV--AGLATAP 448
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
I HF+ + YGL+AN++ +PI S +++P ++ + LM D + + + +GL+ I+
Sbjct: 449 MAIYHFNQVAAYGLLANLIVMPIFSLLIMPGLVLGLALMPFGADGLVWPITGFGLEAILS 508
Query: 159 IAHRISVAHNEF-CIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
IA I+ + + P +F T++ L + + R +G+ + L
Sbjct: 509 IATWIAGWEGAVIAVAQWPPWAFATVLAGGLALCLLRAAWRW---GGLGLIALGLAGAAS 565
Query: 218 SFSPDLLISEKGNLVALVDKNTL-ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQE 276
+ P +I++ +A+ D++ F QW++ P A
Sbjct: 566 AVPPIAMIADGAGNLAIRDEDGEVAVLSRRRARFSLDQWRAVYGLPKGTALRRLDCPPAA 625
Query: 277 KNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIR 336
+ + + + ++ C D+++ L R + I C
Sbjct: 626 P----ICVLRTAGPRISLVRSLEAAGQACRTDDIVILPLWRTERITDGCD---------- 671
Query: 337 DINTKLCNVSLLITPEILQKQGSLEI--TIIPPSNDNDKVKFIIKSAIENLHFPW 389
++L+T L+ G + + S + + PW
Sbjct: 672 ---------AVLLTAARLEALGPVALLPARSGSSVGGPQGWRMTSVKAVRGDRPW 717
Score = 42.9 bits (99), Expect = 0.096, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 79/203 (38%), Gaps = 14/203 (6%)
Query: 1 MLSITKKYDPFP--AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM 58
++ +T + DP T+ +L PP GPA PG +D+ Y++GI +G+ + P++
Sbjct: 168 LVRVTWRGDPIAASPGATLSLFGQLMPPPGPAVPGGYDYGRHLYFEGIGGVGFLMAEPRL 227
Query: 59 IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL------ 112
+ + + + ++Q I + A + +P +
Sbjct: 228 VTEATPTLG-SAAWLQGLRQRIAERIADALPGPAGAVTIALVTGDRSALPPPIVDALRHT 286
Query: 113 -IANILAIPILSFVVIPAGLIAILLMILSLDNIPF--GVMAWGLDIIIHIAHRISVAHNE 169
+A++LAI L ++ + +L L+ M + A I +A +
Sbjct: 287 GLAHLLAISGLHMGLVCGTVFVVLRTALAAIPPLAARWPMKKPAALAACGAGIIYLALSG 346
Query: 170 FCIGRIPETSFVTIVVEFLLMVF 192
I + +F+ + FL ++
Sbjct: 347 GPISA--QRAFIMASIGFLAVLL 367
>gi|254995154|ref|ZP_05277344.1| hypothetical protein AmarM_04131 [Anaplasma marginale str.
Mississippi]
Length = 748
Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 66/374 (17%), Positives = 137/374 (36%), Gaps = 62/374 (16%)
Query: 23 LSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLN 82
L P P F +F++ + G + S + ++ S +
Sbjct: 373 LLTPETILLP-SFQMSFAAVVALAGSCG--------VSRVVSAGSVVRYITAATSGSLIA 423
Query: 83 EIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD 142
I + + +++ HF+ V G+++NI+AIP+ +FVVIP GL+ ++ L
Sbjct: 424 SI----------ATAPYVVYHFNYFSVVGVVSNIIAIPLTAFVVIPLGLVYVITDCLLSG 473
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVFCKTNIRH-I 200
+ + + +I++IAH + + IP S + + + L + + R +
Sbjct: 474 ALVASPLEASVGLILYIAHYAAKVEWLAPTVRSIPPASVLFMTLGLLAFSWWRGTARIIL 533
Query: 201 GSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT---LISNYSNPPSFIFSQWKS 257
G + + ++ + +PD+L G VA+ + + + F +S W
Sbjct: 534 GLLFVLSGFLLALAY---KTPDVLYGVGG--VAVKEGDGQLYFAMRRGSTRGFSYSAW-- 586
Query: 258 ALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKR 317
+E Q + Q +K +C+ GC ++ +
Sbjct: 587 ----------------ARENGQPKIINGGYFGQGKKLICMAG----GCIYDSRVI-ISCD 625
Query: 318 KDMIRLSCQLSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITIIPPSNDNDKVKF 376
+ I C +D++I T C+ IT + ++K G+ +++ S
Sbjct: 626 TEFILQRCSEADLVIHTGSGPRYPAPCSHVPHITYDDIRKLGAHYVSLSGSS-------- 677
Query: 377 IIKSAIENLHFPWT 390
+K PW
Sbjct: 678 -VKVESARTRRPWH 690
Score = 40.2 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM--IYSSESHNTW 68
+ + PP A +DF +Y++GI+A+G+ S K+ S W
Sbjct: 168 IRPGDILTFSGVIHPPPVSASKHGYDFARVAYFRGINAVGFTTSQVKLHERRSKVGFKEW 227
Query: 69 TWKKISSIKQSFLNEI 84
+ I ++ +
Sbjct: 228 VERIRDEIYARLVSGL 243
>gi|56416977|ref|YP_154051.1| hypothetical protein AM884 [Anaplasma marginale str. St. Maries]
gi|56388209|gb|AAV86796.1| hypothetical protein AM884 [Anaplasma marginale str. St. Maries]
Length = 748
Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 67/373 (17%), Positives = 134/373 (35%), Gaps = 60/373 (16%)
Query: 23 LSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLN 82
L P P F +F++ + G + S + ++ S +
Sbjct: 373 LLTPETILLP-SFQMSFAAVVALAGSCG--------VSRVVSARSVVRYITAATSGSLIA 423
Query: 83 EIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD 142
I + + +++ HF+ V G+++NI+AIP+ +FVVIP GL+ ++ L
Sbjct: 424 SI----------ATAPYVVYHFNYFSVVGVVSNIIAIPLTAFVVIPLGLVYVITDCLLSG 473
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIG 201
+ + + +I++IAH + + IP S + + + L + + R I
Sbjct: 474 ALVASPLEASVGLILYIAHYAAKVEWLAPTVRSIPPASVLFMTLGLLAFSWWRGTARII- 532
Query: 202 SIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT---LISNYSNPPSFIFSQWKSA 258
+ + + +PD+L G VA+ + + + F +S W
Sbjct: 533 -LGLLFALSGFLLALAYKTPDVLYGVGG--VAVKEGDGQLYFAMRRGSTRGFSYSAW--- 586
Query: 259 LITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRK 318
+E Q + Q +K +C+ C+ D V +
Sbjct: 587 ---------------ARENGQPKIINGGYFGQGKKLICMA-GGCIY----DSRVIISCDT 626
Query: 319 DMIRLSCQLSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFI 377
+ I C +D++I T C+ IT + ++K G+ +++ S
Sbjct: 627 EFILQRCSEADLVIHTGSGPRYPAPCSHVPHITYDDIRKLGAHYVSLSGSS--------- 677
Query: 378 IKSAIENLHFPWT 390
+K PW
Sbjct: 678 VKVESARTRRPWH 690
Score = 40.9 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM--IYSSESHNTW 68
+ + PP A +DF +Y++GI+A+G+ S K+ S W
Sbjct: 168 IRPGDILTFSGVIHPPPVSASKHGYDFARVAYFRGINAVGFTTSQVKLHERRSKVGFKEW 227
Query: 69 TWKKISSIKQSFLNEIR 85
+ I ++ +R
Sbjct: 228 VERIRDEIYARLVSGLR 244
>gi|222475345|ref|YP_002563762.1| hypothetical protein AMF_669 [Anaplasma marginale str. Florida]
gi|255003327|ref|ZP_05278291.1| hypothetical protein AmarPR_03661 [Anaplasma marginale str. Puerto
Rico]
gi|222419483|gb|ACM49506.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 748
Score = 124 bits (310), Expect = 3e-26, Method: Composition-based stats.
Identities = 67/373 (17%), Positives = 134/373 (35%), Gaps = 60/373 (16%)
Query: 23 LSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLN 82
L P P F +F++ + G + S + ++ S +
Sbjct: 373 LLTPETILLP-SFQMSFAAVVALAGSCG--------VSRVVSAGSVVRYITAATSGSLIA 423
Query: 83 EIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD 142
I + + +++ HF+ V G+++NI+AIP+ +FVVIP GL+ ++ L
Sbjct: 424 SI----------ATAPYVVYHFNYFSVVGVVSNIIAIPLTAFVVIPLGLVYVITDCLLSG 473
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIG 201
+ + + +I++IAH + + IP S + + + L + + R I
Sbjct: 474 ALVASPLEASVGLILYIAHYAAKVEWLAPTVRSIPPASVLFMTLGLLAFSWWRGTARII- 532
Query: 202 SIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT---LISNYSNPPSFIFSQWKSA 258
+ + + +PD+L G VA+ + + + F +S W
Sbjct: 533 -LGLLFALSGFLLALAYKTPDVLYGVGG--VAVKEGDGQLYFAMRRGSTRGFSYSAW--- 586
Query: 259 LITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRK 318
+E Q + Q +K +C+ C+ D V +
Sbjct: 587 ---------------ARENGQPKIINGGYFGQGKKLICMA-GGCIY----DSRVIISCDT 626
Query: 319 DMIRLSCQLSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFI 377
+ I C +D++I T C+ IT + ++K G+ +++ S
Sbjct: 627 EFILQRCSEADLVIHTGSGPRYPAPCSHVPHITYDDIRKLGAHYVSLSGSS--------- 677
Query: 378 IKSAIENLHFPWT 390
+K PW
Sbjct: 678 VKVESARTRRPWH 690
Score = 40.9 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM--IYSSESHNTW 68
+ + PP A +DF +Y++GI+A+G+ S K+ S W
Sbjct: 168 IRPGDILTFSGVIHPPPVSASKHGYDFARVAYFRGINAVGFTTSQVKLHERRSKVGFKEW 227
Query: 69 TWKKISSIKQSFLNEIR 85
+ I ++ +R
Sbjct: 228 VERIRDEIYARLVSGLR 244
>gi|294677884|ref|YP_003578499.1| competence protein [Rhodobacter capsulatus SB 1003]
gi|294476704|gb|ADE86092.1| competence protein [Rhodobacter capsulatus SB 1003]
Length = 717
Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 50/341 (14%), Positives = 114/341 (33%), Gaps = 43/341 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ I ++ + + + + ++ + + + +
Sbjct: 385 GFQMSFAATVALI-----------LMAAPWAAH---YHRLPVVLRPVI--MLVLTSLIAG 428
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + HF + YG++AN+LA+P++ VV+PAG++A +L L L +M G
Sbjct: 429 LATAPIAAAHFGRMSQYGMLANLLAVPVMGIVVMPAGVLAAVLAPLGLAGPALWLMGLGT 488
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
D ++ +A ++ +P + V L + + M+ + ++
Sbjct: 489 DWVLAVADFVAGLAGAQTF--LPAPPGWVLPVLALAAGAAVLSRGAFRAAMLALALVAFA 546
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKED 273
+ + P LLI+ G LV L+ + + PSF W A + +
Sbjct: 547 GWGLAPRPALLIAPGGALVGLMTPEGRALSKA-APSFTAEGWLEADGDAVTPKEAMARAG 605
Query: 274 LQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRK--DMIRLSCQLSDIL 331
K+ + +V + + D + +C+ ++
Sbjct: 606 ---------------------FSGKRGVRQADWQGRRLVHLSGKAALDNLENACRDGALV 644
Query: 332 ITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDND 372
+ L L + G+L +
Sbjct: 645 VLDT-AAPRGFTGDCRLYDRRSLARTGALSFEVSGQIRRAR 684
Score = 44.8 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 35/214 (16%), Positives = 72/214 (33%), Gaps = 8/214 (3%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYS-----IPKMIYSSESHN 66
+ A LSPP+ P PG +DF ++++ G+ A+GY S P + +
Sbjct: 172 EPGLRVATTAHLSPPAEPIAPGAWDFRRNAWFSGLGALGYTRSPVVVIAPPEQDWGLAAH 231
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+ ++++ + A + S + L +I++I L +
Sbjct: 232 RARMRLSAAMQDRIGGQAGAVAAALMTGDRSGISEATNATLRASNLY-HIVSISGLHMGM 290
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+ + L L+L + W I + + G T I+
Sbjct: 291 LAGFVFGALRWGLALIGPFALI--WPTKKIAAAVALAASTAYLWVSGGDIATQRAWIMTA 348
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+L+ + I +LF +P + +
Sbjct: 349 VMLLAILVDRRALSLHTVALAAIFLLFLWPEALT 382
>gi|157827689|ref|YP_001496753.1| ComEC/Rec2 family protein [Rickettsia bellii OSU 85-389]
gi|157802993|gb|ABV79716.1| ComEC/Rec2 family protein [Rickettsia bellii OSU 85-389]
Length = 656
Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats.
Identities = 42/231 (18%), Positives = 95/231 (41%), Gaps = 16/231 (6%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSES-HNTWTWKKISSIKQSFLNEIRANIGTYG 92
F +F + ++ ++ ++ + + IS+I SFL I
Sbjct: 359 SFQLSFIAVLSLVAGYEFYLKNSWLLGEKKGIFGAIKFYTISNIYSSFLASII------- 411
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ +I F Y + N++A+P++SF ++P L+++ ++ D+ ++ +
Sbjct: 412 ---TAPVVINQFFIFSTYSVPTNLIAVPVMSFFLMPLALLSLPFTMIGFDSYILKIIGFF 468
Query: 153 LDIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
++III AH ++ + + G I S + + F + KT R G ++ ++ I
Sbjct: 469 IEIIIRSAHYFNNLPGSVWYFGYITNFSILLFLFGFFWICIWKTTWRLFGLAIMAVSFIF 528
Query: 212 LFTFPYSFSPDLLISEKGNLVALVDKNTLISNYS-NPPSFIFSQWKSALIT 261
+ YS P+L+ + + +K + Y+ +F W +
Sbjct: 529 ML---YSPKPELIFDASNMAIGVKNKQGKLEIYADKMATFNRIYWANWFGQ 576
Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 2 LSITKKY-DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+SI KKY I +A+L P PG +DF F +Y I A GY S PK+I
Sbjct: 135 ISIPKKYLQKVRVNDYIALLAKLYKPQNSILPGGYDFGFYAYLADIGANGYAMSEPKIIA 194
>gi|88608712|ref|YP_506207.1| ComEC/Rec2 family protein [Neorickettsia sennetsu str. Miyayama]
gi|88600881|gb|ABD46349.1| ComEC/Rec2 family protein [Neorickettsia sennetsu str. Miyayama]
Length = 736
Score = 122 bits (307), Expect = 7e-26, Method: Composition-based stats.
Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 5/195 (2%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
+ +A+ + F+ HFH + V G+ AN +AIP SF+VIP +LLM L + +
Sbjct: 449 TSIFATAATAPFISYHFHYLSVIGVAANAIAIPFTSFLVIPTLAGILLLMPLYDSELLYA 508
Query: 148 VMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIG 206
+++ + I++ + S + F + T+ + +V L ++ T R++G + I
Sbjct: 509 LLSTEIKILLSLMESFSHLNLGYFNVQGFSGTTLLVMVTGTLSLLIGTTWKRYLGIMPIA 568
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSN-PPSFIFSQWKSALITPFHE 265
+ I ++ +S PD+ ISEK + D N N S P +FI +W +
Sbjct: 569 MGIAMI---KFSPLPDIFISEKNIAIRSQDNNLYFLNASRVPQNFIAKKWLQYSGCKASK 625
Query: 266 APHVQKEDLQEKNQS 280
++ +++++ S
Sbjct: 626 ISNIPNSEIEKRENS 640
Score = 42.9 bits (99), Expect = 0.094, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 12/129 (9%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ A L P G A P +DF Y+ G+ A G ++ + + +
Sbjct: 133 GDIVNFSAYLLPVQGAATPSGYDFAMFQYFSGVRATGRLVGEITVVKPTSHQSIF----- 187
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPILSFVV 126
I++ + + N+ S A I I +++LAI L +
Sbjct: 188 PRIRKVIHEKFKYNLAEIPSEIALALTIGKRDGIDPKINELFRKSGTSHLLAISGLHMGL 247
Query: 127 IPAGLIAIL 135
+ ++L
Sbjct: 248 VGLFFFSLL 256
>gi|269958610|ref|YP_003328397.1| putative competence protein [Anaplasma centrale str. Israel]
gi|269848439|gb|ACZ49083.1| putative competence protein [Anaplasma centrale str. Israel]
Length = 721
Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 66/375 (17%), Positives = 146/375 (38%), Gaps = 61/375 (16%)
Query: 23 LSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLN 82
L P P +F + + A+ + K+I S + ++ S +
Sbjct: 363 LFTPEAILLP-----SFQMSFAAVIALAASCDVSKVI----SACSVVRYITAAAAGSLIA 413
Query: 83 EIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD 142
I + + +++ HF+ V G+I+NI+AIP+ +FVVIP GL+ +++ LS+
Sbjct: 414 SI----------ATAPYVVYHFNYFSVVGVISNIVAIPLTAFVVIPLGLVYVVMDYLSIG 463
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIG 201
++ V+ + +I+ +A + + IP ++ + + + L + + +R +
Sbjct: 464 SLVSRVLEMSVGLILCVARYGAKVEWLAPTVRSIPPSAVLLMTLGLLAFSWGRGTLRIVS 523
Query: 202 SIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSN----PPSFIFSQWKS 257
++ ++ ++L +PD+L G VA+ + + + F +S W
Sbjct: 524 GLLFTLSGLLLAIT--YKTPDILFGING--VAVKEGDGKLHFAMRKGNSARGFAYSAW-- 577
Query: 258 ALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKR 317
+E Q+ + + +K +C+ C V +
Sbjct: 578 ----------------ARENGQTRIVNEEYFGRGKKLICVA-GGCTY----GSRVLISCD 616
Query: 318 KDMIRLSCQLSDILI-TTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKF 376
+ I C +D++I T + LC+ I+ + ++++G+ ++ S
Sbjct: 617 TEFIVQHCSEADLVIHTQLGVHYPSLCSHVPHISYDDVKERGAHYVSFSGSS-------- 668
Query: 377 IIKSAIENLHFPWTK 391
IK PW
Sbjct: 669 -IKVESARTGRPWHI 682
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 2 LSITKKYDP-FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
L++ DP + + PP A +DF +Y++GI A+G+ + ++
Sbjct: 148 LAVRTAIDPTIRPGDILTFSGVMHPPLISASKHGYDFARVAYFRGIDAVGFT-TSQVKLH 206
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIG 89
S + + ++ + + +
Sbjct: 207 ERRSGVGLKER-VERVRDRIYARLVSGLQ 234
>gi|261222311|ref|ZP_05936592.1| DNA uptake protein [Brucella ceti B1/94]
gi|260920895|gb|EEX87548.1| DNA uptake protein [Brucella ceti B1/94]
Length = 266
Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats.
Identities = 45/240 (18%), Positives = 84/240 (35%), Gaps = 46/240 (19%)
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT-LISN 243
+ L+ V T ++ + ++ + + P+ PD+++SE LV + ++ N
Sbjct: 1 MALLVAVAFTTRLKLLALPLLAAGLAVFLKVPF---PDIVVSEDAKLVVVRQQDGSFAVN 57
Query: 244 YSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCV 303
P F WKSA + P QK + SS F+C ++ C
Sbjct: 58 RDRPSKFTIDNWKSAYLIKQIIEP--QKGTKKNNAGSS----------SGFIC-EEGVCF 104
Query: 304 GCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKL-CNVSLLITPEILQKQGSLEI 362
R + + M ++C + DI I I + +L+I+ L +G+LEI
Sbjct: 105 VTLRDGRTLSYTADETMRDVACNIGDIAILAISGKGAQCESEQTLVISKRDLALKGTLEI 164
Query: 363 TII-----PPSNDNDKVKFI-----------------------IKSAIENLHFPWTKHRI 394
+ + K + + A++ PW HR+
Sbjct: 165 RLGGQLSIASDKADSKPALVPPKPGLEAEQLPNRPAFQYYRDQLTFAVDAPSRPWHLHRL 224
>gi|296537259|ref|ZP_06899153.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296262414|gb|EFH09145.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 224
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 5/181 (2%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ + HF + +YGL AN++A+P+ SF+V+PAGL A+L L L+ P +M WG++ ++
Sbjct: 33 PYGLHHFGRLQLYGLAANMVAVPLTSFLVMPAGLAAMLAWPLGLEQWPLWLMGWGVEGVL 92
Query: 158 HIAHRISVAHNEFCIGR-IPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+A ++ R +P + + L + + R G +I +
Sbjct: 93 WVARSVAAWPGAALPARPMPGWGLGLLSLGLLWLCLWRQGWRWWGVPLIAAGLFSALAV- 151
Query: 217 YSFSPDLLISEKGNLVALVDKNTLISNY-SNPPSFIFSQWKSALITPFHEAPHVQKEDLQ 275
PD+L+S L+A + + +F+ W + A + + L
Sbjct: 152 --RPPDILVSADARLIAFRTEAGVALQRLPGGTAFLRDNWLRSWGEEAGSALAIDRPGLP 209
Query: 276 E 276
Sbjct: 210 G 210
>gi|91204981|ref|YP_537336.1| ComEC/Rec2 family protein [Rickettsia bellii RML369-C]
gi|91068525|gb|ABE04247.1| ComEC/Rec2 family protein [Rickettsia bellii RML369-C]
Length = 275
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 82/196 (41%), Gaps = 6/196 (3%)
Query: 69 TWKKISSIKQSFLNEIR-ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
TW++ S I S + +I F Y + N++A+P++SF ++
Sbjct: 3 TWREKSIFGAIKFYAISNIYSSFLASIITAPVVINQFFIFSTYSVPTNLIAVPVMSFFLM 62
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVE 186
P L+++ ++ D+ ++ + ++III AH ++ + + G I S + +
Sbjct: 63 PLALLSLPFTMIGFDSYILKIIGFFIEIIIRSAHYFNNLPGSVWYFGYITNFSILLFLFG 122
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYS- 245
F + KT R G ++ ++ I + YS P+L+ + + +K + Y+
Sbjct: 123 FFWICIWKTTWRLFGLAIMAVSFIFML---YSPKPELIFDASNMAIGVKNKQGKLEIYAD 179
Query: 246 NPPSFIFSQWKSALIT 261
+F W +
Sbjct: 180 KMATFNRIYWANWFGQ 195
>gi|119386426|ref|YP_917481.1| ComEC/Rec2-related protein [Paracoccus denitrificans PD1222]
gi|119377021|gb|ABL71785.1| ComEC/Rec2-related protein [Paracoccus denitrificans PD1222]
Length = 717
Score = 117 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 59/347 (17%), Positives = 112/347 (32%), Gaps = 42/347 (12%)
Query: 34 LFDFNFSSYYKGI-SAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
F +F++ I + P + + WT + SF+
Sbjct: 389 GFQMSFAATAALILMQEPWARLAPLLPW-------WTRPVLMLFVSSFVA---------- 431
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ HF + YGL+AN+L +P++ +V+P G+ A LL L L +M G
Sbjct: 432 GMVTAPIAAAHFGRMSQYGLLANMLVVPVVGTLVMPGGVFAALLAPLGLAQPALWLMGLG 491
Query: 153 LDIIIHIAHRISVAHNEFC-IGRIPETSFVTIVVEFLLMVFCKTN-------IRHIGSIM 204
D ++ +A IS + P I + ++ V +
Sbjct: 492 TDWMLTVAQWISDLDGAVTLLPAAPRAVLPLIGIGAMMAVLGPIPGGAHRPVLLWRRGTG 551
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFH 264
+ + + PD+LIS +G+ A++ I + SF W +A
Sbjct: 552 LALLAAAALLWVGDRRPDVLISAQGDAAAVLTPAGRIPSKPRGGSFAVENWLAADGDAAD 611
Query: 265 EAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLS 324
+A + Q + R+ + +
Sbjct: 612 QAGAAARPLWQGTPSDRWAVLDRAGMRLRIRHLTGKGA---------------AQDAAAH 656
Query: 325 CQLSDILITTIRD-INTKLCNVSLLITPEILQKQGSLEITIIPPSND 370
C+ IL+ I ++ + L++ E L K+G+ I +
Sbjct: 657 CREGGILVANIPLSMSAEARKECLVLDSEYLGKRGATAIFLTEGGAS 703
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
+ A L PP+GP+ PG FDF ++++ + A+GY + + T
Sbjct: 175 PGQRVMLTAHLGPPAGPSEPGGFDFRRMAWFQRLGAVGYARAPVMTVELPADGGTLA--- 231
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP 108
+ I+ S ++ IG A A+ + I
Sbjct: 232 LHRIRMSLSEAMQDRIGGQSGAVAAALMTGDRSGIA 267
>gi|294084071|ref|YP_003550829.1| DNA uptake protein ComEC [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663644|gb|ADE38745.1| possible DNA uptake protein, ComEC [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 691
Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/325 (15%), Positives = 121/325 (37%), Gaps = 52/325 (16%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ ++ ++ + P++I +S + ++ I + + A+
Sbjct: 371 SFQLSFAATMALVAWYEFYATRPRLISASRN------PVLAYIGGVIIASLIAST----- 419
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + F +HF + +G++ANI+ IP+ ++P+G++ ++ + L+ G+M G+
Sbjct: 420 -ATAPFTAQHFGAVTPWGVMANIVGIPLTGLWIMPSGILVVIGYMTGLEAYVNGIMQAGI 478
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF-CKTNIRHIGSIMIGITIIIL 212
D+++ +A IS P + I+ L+ C G + ++ +
Sbjct: 479 DLLVSLAGYISSLPWAGWRIYPPGYMALAILSAGCLVCIGCHHRAYPFGLS---LLVLAV 535
Query: 213 FTFPYSFSPDLLISEKGNLVALV--DKNTLISNYS-----NPPSFIFSQWKSALITPFHE 265
+ + P ++ KG L+ ++ + ++S SF + L P H
Sbjct: 536 ALWWRTEIPQGVLFAKGQTRFLIMAGQDGIAHSHSSQNHRRLSSFFTDIAERQLARPVHP 595
Query: 266 APHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSC 325
A K +C+ V ++ R+ + +C
Sbjct: 596 ATMC-----------------------------KPYCIDYMADGRKVTIVDRRYNLTTAC 626
Query: 326 QLSDILITTIRDINTKLCNVSLLIT 350
Q +I ++ + N +
Sbjct: 627 QSQTDIILSLVPVKYPCRNNVKIYD 651
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/231 (17%), Positives = 76/231 (32%), Gaps = 15/231 (6%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
I ARL P P P D+ + + +SA G+ + +
Sbjct: 159 IGDHIAFSARLYPSPTPILPRSPDYALQAQIRNVSASGFVIGDLQHDGGQRDSL---ADR 215
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY-------GLIANILAIPILSFV 125
+ + F ++ ++ A+ ++ I +A++LAI L
Sbjct: 216 LGRFRNQFALQLSRDMNKPAGGIAAALMVGDRRFISEATYETFRKSGLAHLLAISGLHMG 275
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
++ G+IA + + SL P M + +A I+ F G I+
Sbjct: 276 LLCFGVIAAVRALASLA--PSFSMRVPVHKYAAVAGVITGLGYVFVSGASISAVRAFIMA 333
Query: 186 EFLLMVFCKTNIRHIGSIMIGITIIILFTFP---YSFSPDLLISEKGNLVA 233
F++ + + + +L P Y+ S L + LVA
Sbjct: 334 LFVISAILLDRLALTLRNVALTAMFVLILNPAALYTASFQLSFAATMALVA 384
>gi|254294063|ref|YP_003060086.1| ComEC/Rec2-related protein [Hirschia baltica ATCC 49814]
gi|254042594|gb|ACT59389.1| ComEC/Rec2-related protein [Hirschia baltica ATCC 49814]
Length = 663
Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/205 (15%), Positives = 77/205 (37%), Gaps = 22/205 (10%)
Query: 26 PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR 85
P PG F +F++ I+ W +K +++ F +
Sbjct: 361 PETVVSPG-FQMSFAATAALIALY----------------ENWPIQKSNNLVGRFWGWLI 403
Query: 86 A--NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
A S + + F HF I +++N++ +PI+S P+ A++L
Sbjct: 404 AVFGTSVTASIATAPFAAFHFGRIAPLSILSNLVVMPIISLWAAPSAAFAMILTPFGWQE 463
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
L++++ I+ + + +F+ ++ LL++ K + IG+
Sbjct: 464 PMLHSFGVSLEVVLKISRFFQEHSPDGNLASFQVPTFILLIASGLLIILLKKYYKIIGAF 523
Query: 204 MIGITIIILFTFPYSFSPDLLISEK 228
+ + + ++ + +P + + +
Sbjct: 524 CLILALASVY---WQRNPIIYVDKD 545
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/240 (14%), Positives = 83/240 (34%), Gaps = 18/240 (7%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSI-PKMIYSSESHNTWTWK 71
++ LSPP P G ++FN ++++ + +G+ + SS +
Sbjct: 149 PGRSVSCYVFLSPPPKPLIAGDYNFNRQAFFEKLGGVGFVLGRCKPINTSSVEERDLIAR 208
Query: 72 ---KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPI 121
++ +I++S I +G A+ + + + +A++LAI
Sbjct: 209 IAIRVDAIRRSISVYIHDLLGHVSGGMATAMITGERSFLSLEDQDTLRSVGLAHLLAISG 268
Query: 122 LSFVVIPAGLIAI--LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
L + A+ ++ + + A L + I S + +
Sbjct: 269 LHMGLAAGVFFALFRFIIPW-FEFAALRIPAQKLSALAAIIG--SSTYLFLSGASVATQR 325
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP--DLLISEKGNLVALVDK 237
+ + L+ V + S+ + + ++I SP + + L+AL +
Sbjct: 326 AYIMAMVALIAVLIDRPAFSVRSLAVAMVVVICIQPETVVSPGFQMSFAATAALIALYEN 385
>gi|218659310|ref|ZP_03515240.1| hypothetical protein RetlI_06426 [Rhizobium etli IE4771]
Length = 190
Score = 92.2 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
PA + + ++ F +F++ +S + ++ +
Sbjct: 50 PAHVVLSALIIIAISPSEVLGPSFQMSFAATLALVSGY-QLWKERRVRENPLLKLPVLRP 108
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL 131
++ F + G S ++F ++HFH + YGL AN+ +PI+SF+V+PAGL
Sbjct: 109 VVA--VAGFFGGVF-LTSLIGGFSTALFAVEHFHRLTAYGLPANLATMPIISFIVMPAGL 165
Query: 132 IAILLMILSLDNIPFGVMAWGLDII 156
+A+LLM LD + V+ + LD++
Sbjct: 166 LAMLLMPFGLDAPLWTVVGFCLDVV 190
>gi|261222312|ref|ZP_05936593.1| DNA uptake protein [Brucella ceti B1/94]
gi|265998275|ref|ZP_06110832.1| DNA uptake protein [Brucella ceti M490/95/1]
gi|260920896|gb|EEX87549.1| DNA uptake protein [Brucella ceti B1/94]
gi|262552743|gb|EEZ08733.1| DNA uptake protein [Brucella ceti M490/95/1]
Length = 616
Score = 90.2 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 14/125 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA------N 87
F +FS+ I+A + +S + ++ + ++ FL + A
Sbjct: 429 SFQMSFSATAALIAAYAW--------WSERNARKFSRAGRKAAERGFLARMVAPAVATGG 480
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD +P
Sbjct: 481 TSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLDWLPLQ 540
Query: 148 VMAWG 152
VM G
Sbjct: 541 VMGVG 545
Score = 74.8 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 56/139 (40%), Gaps = 9/139 (6%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
+ + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 211 AIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRVPPPQTLSAEF 270
Query: 72 K--ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPIL 122
I++++ I+ I A+ + I +A+IL+I L
Sbjct: 271 SEWIATLRVRVSERIQEVIAGEDGNVAAALIAGARGGISEETNKDLRKAGLAHILSISGL 330
Query: 123 SFVVIPAGLIAILLMILSL 141
+ ++ L + +L
Sbjct: 331 HMALAAGVVMLALRSLFAL 349
>gi|89068876|ref|ZP_01156258.1| Putative Competence protein [Oceanicola granulosus HTCC2516]
gi|89045457|gb|EAR51521.1| Putative Competence protein [Oceanicola granulosus HTCC2516]
Length = 792
Score = 88.3 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 52/138 (37%), Gaps = 16/138 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ ++ P W+ ++ T
Sbjct: 343 GFQMSFAATVALVAVFAALRRAP-------------WRLPRGLRGVAAVV---VSSTVAG 386
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + HF+ + YGLIAN+ ++P++ V+PA ++A L L L+ VM GL
Sbjct: 387 LATAPIAAAHFNMVSHYGLIANLASVPVMGAAVMPAAVLAACLWPLGLEGPALWVMEQGL 446
Query: 154 DIIIHIAHRISVAHNEFC 171
I+ +A ++
Sbjct: 447 GWILAVAEHVAGLEGAVG 464
Score = 36.7 bits (83), Expect = 7.4, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 58/146 (39%), Gaps = 16/146 (10%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
+ LSPP GP PG FDF +++ + A+GY + P + + W +
Sbjct: 131 PGMVVILTGHLSPPGGPVEPGGFDFRRMAWFDRLGAVGYTRT-PVLALAPPEATPGLWLQ 189
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPILSFV 125
+ ++ S ++A +G A A+ + + L +A++LAI L
Sbjct: 190 AARMRLS--AAVQARVGGETGAFAAAIVTGDRSAMGQETLAELRATNLAHLLAISGLHMG 247
Query: 126 VIPAGLIAILLM------ILSLDNIP 145
++ + +L + L+L
Sbjct: 248 MLTGFVFGLLRLGLAACPPLALRWPG 273
>gi|218512643|ref|ZP_03509483.1| hypothetical protein Retl8_02596 [Rhizobium etli 8C-3]
Length = 258
Score = 83.3 bits (204), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 11/105 (10%)
Query: 4 ITKKYD-PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFY--------- 53
I + D PF I G ARL+PP+GPA PGL DF+F +Y+ GI A G+FY
Sbjct: 23 IARGADMPFEIGDIITGRARLTPPAGPALPGLNDFSFGAYFDGIGANGFFYRAPEKVDLQ 82
Query: 54 -SIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
P + +S++ W ++ S I + + + G + +A +
Sbjct: 83 AGPPAVTSTSDALLEWLYRLRSGIGDRIRSMLPGDTGAFAAALVT 127
>gi|255262298|ref|ZP_05341640.1| competence protein [Thalassiobium sp. R2A62]
gi|255104633|gb|EET47307.1| competence protein [Thalassiobium sp. R2A62]
Length = 224
Score = 81.4 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 16/147 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ ++ +P+++ W+ +
Sbjct: 80 GFQMSFAATTALVAVFSALRDMPRIL------PKWSSPIVV----------VVVSSAVAG 123
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + F HF+ I YGLIAN+LA+P++ VV+PA ++A+ L L I F +M L
Sbjct: 124 FATAPFAAVHFNQISHYGLIANLLAVPMMGTVVMPAAVLAVCLAPFDLAWIGFWIMEQRL 183
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSF 180
I+ +A + P
Sbjct: 184 TWILFVAQSAASQPRAVSHVVTPAPVV 210
>gi|261219493|ref|ZP_05933774.1| DNA uptake protein [Brucella ceti M13/05/1]
gi|261321988|ref|ZP_05961185.1| DNA uptake protein [Brucella ceti M644/93/1]
gi|260924582|gb|EEX91150.1| DNA uptake protein [Brucella ceti M13/05/1]
gi|261294678|gb|EEX98174.1| DNA uptake protein [Brucella ceti M644/93/1]
Length = 535
Score = 76.0 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 14/115 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA------N 87
F +FS+ I+A + +S + ++ + ++ FL + A
Sbjct: 429 SFQMSFSATAALIAAYAW--------WSERNARKFSRAGRKAAERGFLARMVAPAVATGG 480
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD 142
++ IF HF+ GL+ N+LA+P +S +V+P G+ ++LM L LD
Sbjct: 481 TSLVAGLASGIFAAYHFNNTAPLGLVGNVLALPAISILVMPFGVFGLVLMPLQLD 535
Score = 75.6 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 9/139 (6%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWK 71
+ + G ARL PSGP PG +DF+F +Y+ GI A G+F PK I
Sbjct: 211 AIGSGLTGFARLRVPSGPVRPGNYDFSFHAYFNGIGANGFFLGTPKTIRVPPPQTLSAEF 270
Query: 72 K--ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV-------YGLIANILAIPIL 122
I++++ I I A+ + I +A+IL+I L
Sbjct: 271 SEWIATLRVRVSERILEVIAGEDGNVAAALIAGARGGISEETNKDLRKAGLAHILSISGL 330
Query: 123 SFVVIPAGLIAILLMILSL 141
+ ++ L + +L
Sbjct: 331 HMALAAGVVMLALRSLFAL 349
>gi|165932574|ref|YP_001649363.1| DNA translocation competence protein [Rickettsia rickettsii str.
Iowa]
gi|165907661|gb|ABY71957.1| DNA translocation competence protein [Rickettsia rickettsii str.
Iowa]
Length = 245
Score = 73.7 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 53/138 (38%), Gaps = 11/138 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSES-HNTWTWKKISSIKQSFLNEIRANIGTYG 92
F +F + + ++ ++ + + S+I SFL I
Sbjct: 118 SFQLSFIAVLSLVVGYEFYLKNSWLLGEKKGIFGAVKFYTASNIYSSFLASII------- 170
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ +I F Y + N++ +PI SF ++P L+++ ++ DN +M +
Sbjct: 171 ---TAPVVINQFFIFATYSVPTNLIVVPITSFFLMPLALLSLPFTMIGFDNYILKLMGFF 227
Query: 153 LDIIIHIAHRISVAHNEF 170
+DIII A +
Sbjct: 228 IDIIIKSAAYFNSLPAAV 245
>gi|15891940|ref|NP_359654.1| putative competence locus E protein 3 [Rickettsia conorii str.
Malish 7]
gi|15619050|gb|AAL02555.1| competence locus E protein 3-like protein [Rickettsia conorii str.
Malish 7]
Length = 244
Score = 73.3 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 54/138 (39%), Gaps = 11/138 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSES-HNTWTWKKISSIKQSFLNEIRANIGTYG 92
F +F + ++ ++ ++ + + S+I SFL I
Sbjct: 117 SFQLSFIAVLSLVAGYEFYLKNSWLLGEKKGIFGAVKFYTASNIYSSFLASII------- 169
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ +I F Y + AN++ +PI F ++P L+++ ++ DN +M +
Sbjct: 170 ---TAPVVINQFFIFATYSVPANLIVVPITLFFLMPLALLSLPFTMIGFDNYILKLMGFF 226
Query: 153 LDIIIHIAHRISVAHNEF 170
+DIII A +
Sbjct: 227 IDIIIKSAAYFNSLPAAV 244
>gi|157827885|ref|YP_001494127.1| hypothetical protein A1G_00115 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|157800366|gb|ABV75619.1| hypothetical protein A1G_00115 [Rickettsia rickettsii str. 'Sheila
Smith']
Length = 242
Score = 73.3 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 53/138 (38%), Gaps = 11/138 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSES-HNTWTWKKISSIKQSFLNEIRANIGTYG 92
F +F + + ++ ++ + + S+I SFL I
Sbjct: 115 SFQLSFIAVLSLVVGYEFYLKNSWLLGEKKGIFGAVKFYTASNIYSSFLASII------- 167
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ +I F Y + N++ +PI SF ++P L+++ ++ DN +M +
Sbjct: 168 ---TAPVVINQFFIFATYSVPTNLIVVPITSFFLMPLALLSLPFTMIGFDNYILKLMGFF 224
Query: 153 LDIIIHIAHRISVAHNEF 170
+DIII A +
Sbjct: 225 IDIIIKSAAYFNSLPAAV 242
>gi|328951899|ref|YP_004369233.1| ComEC/Rec2-related protein [Desulfobacca acetoxidans DSM 11109]
gi|328452223|gb|AEB08052.1| ComEC/Rec2-related protein [Desulfobacca acetoxidans DSM 11109]
Length = 804
Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/186 (19%), Positives = 72/186 (38%), Gaps = 7/186 (3%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA-NIGTYGS 93
+ +F + +S G Y PK+++ + + + IK+ L RA + +
Sbjct: 360 YSLSFQLSF--LSVWGLIYLSPKLLWPWQKLIVNREEPPTIIKKIILWSGRALSTSVAAT 417
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL--LMILSLDNIPFGVMAW 151
+ ++ FH P YG++ N+LAIP++ VV+P G IA+L + L + +
Sbjct: 418 LATLPIVVASFHQAPTYGIVINLLAIPLIGGVVLPLGFIALLTSFLPLPCAAGMLWLGRF 477
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL--LMVFCKTNIRHIGSIMIGITI 209
L+ + S P L L+ + R IG+ + + +
Sbjct: 478 FLETTLRAIEWASSWPGVVLPLPSPTPWQTAAYFLTLISLLGLKQQPWRWIGTSLGVLLL 537
Query: 210 IILFTF 215
+
Sbjct: 538 TGSLIW 543
>gi|238650333|ref|YP_002916185.1| DNA translocation competence protein [Rickettsia peacockii str.
Rustic]
gi|238624431|gb|ACR47137.1| DNA translocation competence protein [Rickettsia peacockii str.
Rustic]
Length = 245
Score = 71.8 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 54/138 (39%), Gaps = 11/138 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSES-HNTWTWKKISSIKQSFLNEIRANIGTYG 92
F +F + ++ ++ ++ + + S+I SFL I
Sbjct: 118 SFQLSFIAVLSLVAGYEFYLKNSWLLGEKKGIFGAVKFYTASNIYSSFLASII------- 170
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ +I Y + AN++ +PI SF ++P L+++ ++ DN +M +
Sbjct: 171 ---TAPVVINQLFIFATYSVPANLIIVPITSFFLMPLALLSLPFTMIGFDNYILKLMGFF 227
Query: 153 LDIIIHIAHRISVAHNEF 170
+DIII A +
Sbjct: 228 IDIIIKSAAYFNSLPAAV 245
>gi|34581023|ref|ZP_00142503.1| hypothetical competence locus E protein 3 [Rickettsia sibirica 246]
gi|28262408|gb|EAA25912.1| hypothetical competence locus E protein 3 [Rickettsia sibirica 246]
Length = 154
Score = 70.6 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 55/138 (39%), Gaps = 11/138 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSES-HNTWTWKKISSIKQSFLNEIRANIGTYG 92
F +F + ++ ++ ++ + + S+I SFL I
Sbjct: 27 SFQLSFIAVLSLVAGYEFYLKNSWLLGEKKGIFGAVKFYTASNIYSSFLASII------- 79
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ +I F Y + AN++ +PI SF ++P L+++ ++ DN ++ +
Sbjct: 80 ---TAPVVINQFFIFATYSVPANLIVVPITSFFLMPLALLSLPFTMIGFDNYILKLIGFF 136
Query: 153 LDIIIHIAHRISVAHNEF 170
+DIII A +
Sbjct: 137 IDIIIKSATYFNSLPAAV 154
>gi|51245556|ref|YP_065440.1| ComE operon protein 3 [Desulfotalea psychrophila LSv54]
gi|50876593|emb|CAG36433.1| related to ComE operon protein 3 [Desulfotalea psychrophila LSv54]
Length = 855
Score = 66.4 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 45/219 (20%), Positives = 77/219 (35%), Gaps = 13/219 (5%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L I +K P + LS P F F +F++ GIS + +
Sbjct: 346 LCIDRKKSPITLIACAALLILLSHPQ-QIFTASFQLSFAAVV-GISLVIPQLQKRLLPPP 403
Query: 62 SESHNTWTWKKISS--IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
E+ +W IS I + L A + + HF+ I + G I N++A
Sbjct: 404 KETSRAISWLLISKNIILAALLVSTVATLAIL------PLSLFHFNRISLIGPITNLIAE 457
Query: 120 PILSFVVIPAGLIAILL--MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
P++ +P G++AI L ++ L I + WGL + I + P
Sbjct: 458 PLICLWSLPLGILAIPLKYILPGLSEILLHMGGWGLLLSISFTDLCARLPFVQIWTTTPA 517
Query: 178 TSFVTI-VVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+ + F+L++ I I L +
Sbjct: 518 IWLIVLYYFGFILLLLRGLWRGGTVLASILIGAAFLLLW 556
>gi|89068879|ref|ZP_01156261.1| competence protein [Oceanicola granulosus HTCC2516]
gi|89045460|gb|EAR51524.1| competence protein [Oceanicola granulosus HTCC2516]
Length = 199
Score = 66.4 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/213 (14%), Positives = 59/213 (27%), Gaps = 35/213 (16%)
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
+ L++ + R + + ++ + + PDLL+SE G L ++ +
Sbjct: 2 LPLVAAGGLVLALWQGRGR---AAGLAPLLVAALLWGRAERPDLLVSESGGLAGVLTEAG 58
Query: 240 LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK 299
+ F W E + L +
Sbjct: 59 RGLSRPRGDGFAAGIWLENDGAGGTEQAIAAGRGVAAGTAHPLAGLRLLHVTG------- 111
Query: 300 SFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGS 359
KR C +D+L+ + + C L + P +L++ GS
Sbjct: 112 ----------------KRGLAAVTGCGGADLLVVNVIPEAPRPC---LTLDPALLRRTGS 152
Query: 360 LEITIIPPSNDNDKVKFIIKSAIENLHFPWTKH 392
+ P + +A WT H
Sbjct: 153 VAGWATPAGLRLE------SAAARAGKRLWTPH 179
>gi|229019550|ref|ZP_04176366.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH1273]
gi|229025791|ref|ZP_04182190.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH1272]
gi|228735499|gb|EEL86095.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH1272]
gi|228741716|gb|EEL91900.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH1273]
Length = 669
Score = 64.4 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 67/198 (33%), Gaps = 39/198 (19%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F + + S + +I+ + + + +
Sbjct: 222 GFQFSFVGSFALL----------------LSAPILLARSNGAIRNTIYISVVSQL----- 260
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
++ L+ HF Y + N+L +P LS +V+P ++ +L M + +A G+
Sbjct: 261 -VSTPILLYHFGYFSPYSIFLNLLYVPFLSILVLPCSIVILLCMPI------IPFLAKGI 313
Query: 154 DIIIHIAHRIS---------VAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGSI 203
++ I +S G+ P + + ++VF + I
Sbjct: 314 AYVLSICLTVSNNFLSYCENFPFIRLTFGQTPLILVIIYCFSIISILVFWEKRI-SQRIF 372
Query: 204 MIGITIIILFTFPYSFSP 221
+ + + + + SP
Sbjct: 373 FMVVGVFLFICTCHYVSP 390
>gi|313200421|ref|YP_004039079.1| DNA internalization-like competence protein comec/rec2
[Methylovorus sp. MP688]
gi|312439737|gb|ADQ83843.1| DNA internalization-related competence protein ComEC/Rec2
[Methylovorus sp. MP688]
Length = 749
Score = 64.0 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 57/173 (32%), Gaps = 8/173 (4%)
Query: 51 YFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY 110
+ P S + + I + + L+ F + +
Sbjct: 320 WAVMAPGFWLSFGAVAVMAFAGAYRIGMLAKWRQAVHAQWAVTLGLLPLLLLLFQQVSLV 379
Query: 111 GLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF 170
+AN +AIP++S V+P L LL I SL + +M + + +A +
Sbjct: 380 SPLANAIAIPVVSLGVVPLALAGTLLPIDSLLWLAHALMQFVTQAMHWLAVSRWAVWQQQ 439
Query: 171 CIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPD 222
P S + + M+ + +R +G + ++ + PD
Sbjct: 440 AP---PAWSLLPAMAGIFWMLLPRGFPLRWLGW----MGLLPMLLIRQEPLPD 485
>gi|108757945|ref|YP_630845.1| DNA internalization-related competence protein ComEC/Rec2
[Myxococcus xanthus DK 1622]
gi|108461825|gb|ABF87010.1| DNA internalization-related competence protein ComEC/Rec2
[Myxococcus xanthus DK 1622]
Length = 822
Score = 63.3 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/223 (12%), Positives = 66/223 (29%), Gaps = 4/223 (1%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ ++ D + PS +F + + +
Sbjct: 326 LALWRRADGLNGLAAAAVVLVAWAPSS-VADLSLRLSFLAVLGLVLLSPPLRQALPLAEP 384
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S + +++ + A+ + S + F + + GLI+N++A+P+
Sbjct: 385 DPSEPHRVRRWWGQAQETVAQTLCAS--AAATLSGLPIVAATFGRVSIAGLISNVVALPL 442
Query: 122 LSFVV-IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
+ + AG A+ ++ L AW ++++ I + A
Sbjct: 443 CGLLTGLAAGGAALFVVAPVLATPVLWAGAWASELLLVITRLFAAAPLASVEVPSLGFLS 502
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDL 223
L R G + + + + P L
Sbjct: 503 ALYAAGLLTWALGTGRWRLGGLLAPAAVVAAILAPVLTPQPGL 545
>gi|145589646|ref|YP_001156243.1| DNA internalization-related competence protein ComEC/Rec2
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145048052|gb|ABP34679.1| DNA internalization-related competence protein ComEC/Rec2
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 801
Score = 63.3 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/172 (15%), Positives = 62/172 (36%), Gaps = 8/172 (4%)
Query: 26 PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR 85
P P PG F +F + + A+G + + E W + + +++ +
Sbjct: 329 PMAPYTPG-FWLSFGAVAAILFAMGDSAGLIGIPTGKELEVHWVARLSQAFREACRVQAV 387
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
I F + F+ + V +AN +AIP++S++V P + LL +
Sbjct: 388 VTIALL------PFTLYWFYQVSVVSPVANAIAIPLVSYIVTPLAISGALL-PDFIGRWL 440
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI 197
+ ++ + ++ + PE + + ++ N+
Sbjct: 441 LLLAHISMEYLAIFLEWLASWKWAVVWSQQPEWWLLLLSGTGIIYAIRPGNL 492
Score = 36.3 bits (82), Expect = 9.7, Method: Composition-based stats.
Identities = 24/213 (11%), Positives = 54/213 (25%), Gaps = 25/213 (11%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW---- 68
+ A+L P G P FDF ++++ A G S ++ +
Sbjct: 121 PGQRWKLKAKLKRPYGALNPHTFDFERWAFHQDFGATGSVRSGELLLAKEIGWLEFELQM 180
Query: 69 ---TWKKISSIKQSF-----LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
WK I+ + + + F+ I ++++I
Sbjct: 181 ELARWKLRQKIETLLPTDARYAGVMIALVMGDQNAIPQDDWYVFNATG----IGHLISIS 236
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
L ++ A + P + + A ++ + G
Sbjct: 237 GLHVTMLAGVGAAFAAFFWRRGSWPLRIP---VGKFAAAAGFLTAFIYAWLAGFQIPAQR 293
Query: 181 VTIVVEFLLMVFCKTN------IRHIGSIMIGI 207
+V + I + +
Sbjct: 294 TMYMVGVVAFALWSGRNPRAFDIWWWALAFVLV 326
>gi|117923910|ref|YP_864527.1| DNA internalization-related competence protein ComEC/Rec2
[Magnetococcus sp. MC-1]
gi|117607666|gb|ABK43121.1| DNA internalization-related competence protein ComEC/Rec2
[Magnetococcus sp. MC-1]
Length = 815
Score = 62.9 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/199 (16%), Positives = 72/199 (36%), Gaps = 24/199 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIY---------SSESHNTWTWKKISSIKQSFLNEI 84
F +F + + + P++ +S N W ++ + + +
Sbjct: 359 GFQLSFLCVVVLLG--VFSPAAPELAGVMQRAWSPPEPQSSNRWHRLLKGGLESAKASLL 416
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLD 142
+ FH + +YG+ N+L IP + F+V+P GL+A++L L L
Sbjct: 417 L-------GLVTGPLVAGVFHRVALYGVGLNLLVIPWVGFLVVPVGLLAVVLYPLVPPLA 469
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
+ W L + + ++ + + V + + F + R
Sbjct: 470 GWLLQLTGWLLWPVQELVSWVNTLPGAWWRVAGQGDDLLWAYVLVVGLAFMQRAYR---- 525
Query: 203 IMIGITIIILFTFPYSFSP 221
+ + ++L ++P S +P
Sbjct: 526 GPLLLLALLLASWPQSATP 544
Score = 39.8 bits (91), Expect = 0.82, Method: Composition-based stats.
Identities = 27/191 (14%), Positives = 53/191 (27%), Gaps = 13/191 (6%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYS--IPKMIYSSESHNTWTW 70
T + A+L G PG FD+ +G+ G+ + + N + W
Sbjct: 150 PGTRLRLHAKLRTTQGLRVPGGFDYGLWLRRQGVVMTGHSSHPVVALADGGGYAWNRFRW 209
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ I + A + V GL +++AI L ++ AG
Sbjct: 210 QVSQWIATTLPGATGAVAQALLVGMRDAMALPLQEQWQVAGLY-HLVAISGLHVGLVAAG 268
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF----VTIVVE 186
L + + + W + + G + ++
Sbjct: 269 LFQL------WRWLLSRRLRWVARWDLKPWAALLSLPGVLAYGFLAGWGVSTQRAVVMAV 322
Query: 187 FLLMVFCKTNI 197
LL+
Sbjct: 323 VLLLALGSGRW 333
>gi|291166064|gb|EFE28110.1| late competence operon required for DNA binding and uptake
[Filifactor alocis ATCC 35896]
Length = 450
Score = 62.9 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 63/155 (40%), Gaps = 10/155 (6%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW-----TWKKISSIKQSFLNEIRANIG 89
+D F + + +IG FY PK+ + TW W+ + ++ I +
Sbjct: 267 WDIGFQLSFASVISIGIFY--PKLHRTMGQFLTWNPTNKVWEYGKVMVGYMISLIEVTVA 324
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM 149
I +FH IP+YG+IAN++AIP+++ +I + L +++ +
Sbjct: 325 --AQLLTLPLCIYYFHQIPIYGIIANLVAIPMITIDMILFLVAFFLPNGFFVEHYVIELC 382
Query: 150 AWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTI 183
G+D ++ I ++ + + I
Sbjct: 383 NKGMDYLLHWIHQLTALPFSNLKASEFSPYWLILI 417
>gi|237746040|ref|ZP_04576520.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229377391|gb|EEO27482.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 809
Score = 62.9 bits (151), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/222 (15%), Positives = 70/222 (31%), Gaps = 16/222 (7%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
G+ L P PG F + + I Y + + + I
Sbjct: 359 AGVVLLFDPLALMKPG-----FWLSFVAVGTILYATADRTRRLPEKDSRFSRLRHILGSA 413
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
+ + + F + + G +AN LAIP++S V P L+ +L
Sbjct: 414 ARTQWAVTIGLV--------PLTMLFFGRVSLIGPLANALAIPVVSLFVTPLALLGSVL- 464
Query: 138 ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF-LLMVFCKTN 196
L N+ V+ + + + I + +P + + L M+ K
Sbjct: 465 PSPLINLVLTVVHFAIQTLADILEWLGFLPFAVWSAPVPSFYLIIFALAGTLWMLAPKGW 524
Query: 197 -IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
R +G + + P + + + G A++ +
Sbjct: 525 PFRGLGLLCWLPLFLSAPAHPGYGEAWITVLDVGQGSAVLVE 566
Score = 47.5 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 36/248 (14%), Positives = 82/248 (33%), Gaps = 36/248 (14%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I K+ + RL P GPA P FD+ + +GI A G+ + ++ +E
Sbjct: 142 IGKRARNVLPGQKWQFNVRLKRPHGPANPDGFDYELWLFEQGIRATGHVNTDVRLPDPNE 201
Query: 64 SHNTWT---WKKISSIKQSFLNEIRANIGT--YGSASASIFLIKH----------FHCIP 108
+T+ I++I+Q I + Y ++ + + F+
Sbjct: 202 LVDTFVFTPMNAINAIRQKLRERIYRALPDGEYAGVIVALVIGEQKAISRSDWEIFNRTG 261
Query: 109 VYGLIANILAIPILSFVVIPAGLIAILLMI-----LSLDNIPFGVMAWGLDIIIHIAHRI 163
I++++AI L ++ ++ + + +P + A A I
Sbjct: 262 ----ISHLVAISGLHITLVSGLFAGLVSALWRRSFFTKKQLPLLLPAQK-------AAAI 310
Query: 164 SVAHNEFCIGRIPETSFV----TIVVEFLLMVFCKTNI-RHIGSIMIGITIIILFTFPYS 218
+ + ++ + + + R ++ +++LF
Sbjct: 311 AGVGMALLYVALAGFGIPARRTLCMIVIVALALWTGRLTRFSHVLLAAAGVVLLFDPLAL 370
Query: 219 FSPDLLIS 226
P +S
Sbjct: 371 MKPGFWLS 378
>gi|163790314|ref|ZP_02184746.1| comEC/Rec2 family protein [Carnobacterium sp. AT7]
gi|159874385|gb|EDP68457.1| comEC/Rec2 family protein [Carnobacterium sp. AT7]
Length = 584
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 77/177 (43%), Gaps = 13/177 (7%)
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ + L HF G+ AN++ +P+ ++VV+P + L + F ++
Sbjct: 361 TLISIPILSFHFFEFSWIGMFANLIFVPLFTWVVMPLSIFLFASSYLLSGTLFFHFLSNL 420
Query: 153 LDIIIHIAHRISV-----AHNEFCIGRIPETSFVTIVVEF-LLMVFCKTNIRHIGSIMIG 206
++ ++ + + + ++ G++P F+ +++ L +V + + S+++
Sbjct: 421 MESLLEMTEWLVLKIKLFPYSTIVTGKVPFGLFILMIIGLILFIVALEGRKKIKRSVVLL 480
Query: 207 ITIIILFTFPYSFSP--DLLISEKGNLVALV-----DKNTLISNYSNPPSFIFSQWK 256
+ + +F + ++P ++L+ + G A++ + + +F +W+
Sbjct: 481 VVVFTIFIYYQKYNPFGEVLVLDVGQGDAILIKKPFGAGVYLIDTGGAMAFEKEEWQ 537
>gi|114799405|ref|YP_760489.1| hypothetical protein HNE_1785 [Hyphomonas neptunium ATCC 15444]
gi|114739579|gb|ABI77704.1| hypothetical protein HNE_1785 [Hyphomonas neptunium ATCC 15444]
Length = 258
Score = 62.5 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 53/137 (38%), Gaps = 11/137 (8%)
Query: 119 IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN--EFCIGRIP 176
+P+++FV PA + ++L + ++ L++++ + H +P
Sbjct: 1 MPVVTFVTAPAAALTVILALFGHAEFGLKLLGQSLELVLTMTHYFYNLSPGVVRMPVPMP 60
Query: 177 ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP------YSFSPDLLISEKGN 230
+ V + + M+ R IG ++ I L+ +S S D+ I+
Sbjct: 61 PMALVFLSLSLGAMMAFAGWARLIGGALLLAPAIWLWGHAPKVVMHWSVSGDVYIANPDG 120
Query: 231 LV---ALVDKNTLISNY 244
+V +L D + +
Sbjct: 121 MVERLSLTDGDGMAPLR 137
>gi|56751655|ref|YP_172356.1| competence protein ComE [Synechococcus elongatus PCC 6301]
gi|56686614|dbj|BAD79836.1| competence protein ComE [Synechococcus elongatus PCC 6301]
Length = 728
Score = 62.1 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/212 (13%), Positives = 78/212 (36%), Gaps = 28/212 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F + + ++ W +++ I + +
Sbjct: 355 GFQFSFLATLGLVVSV----------RPITDRLDWLPPRLA---------ILIAVPLAAT 395
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP---AGLIAILLMILSLDNIPFGVMA 150
+ F + Y + AN+L P+L+ + + AGL++++ + L ++ +++
Sbjct: 396 LWTLPLQLHAFGTLSPYAIPANVLVTPLLASLGMGGVWAGLLSLIWLPLG--SVAAWLLS 453
Query: 151 WGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFC---KTNIRHIGSIMIG 206
L ++I + I+ + G+I + + + L++ + R + +I
Sbjct: 454 APLWLLISLVSTIANLPGATWATGQIALIVVLLCYLSYALLLTWPRLRRRWRSLAVALIA 513
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKN 238
I ++ + L ++ G L + D+
Sbjct: 514 IVLLPGLAQAATQQEILFLNSDGPLAVVRDRG 545
>gi|81301267|ref|YP_401475.1| ComEC/Rec2-related protein [Synechococcus elongatus PCC 7942]
gi|81170148|gb|ABB58488.1| ComEC/Rec2-related protein [Synechococcus elongatus PCC 7942]
Length = 724
Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/212 (13%), Positives = 78/212 (36%), Gaps = 28/212 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F + + ++ W +++ I + +
Sbjct: 351 GFQFSFLATLGLVVSV----------RPITDRLDWLPPRLA---------ILIAVPLAAT 391
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP---AGLIAILLMILSLDNIPFGVMA 150
+ F + Y + AN+L P+L+ + + AGL++++ + L ++ +++
Sbjct: 392 LWTLPLQLHAFGTLSPYAIPANVLVTPLLASLGMGGVWAGLLSLIWLPLG--SVAAWLLS 449
Query: 151 WGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFC---KTNIRHIGSIMIG 206
L ++I + I+ + G+I + + + L++ + R + +I
Sbjct: 450 APLWLLISLVSTIANLPGATWATGQIALIVVLLCYLSYALLLTWPRLRRRWRSLAVALIA 509
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKN 238
I ++ + L ++ G L + D+
Sbjct: 510 IVLLPGLAQAATQQEILFLNSDGPLAVVRDRG 541
>gi|332306128|ref|YP_004433979.1| DNA internalization-related competence protein ComEC/Rec2
[Glaciecola agarilytica 4H-3-7+YE-5]
gi|332173457|gb|AEE22711.1| DNA internalization-related competence protein ComEC/Rec2
[Glaciecola agarilytica 4H-3-7+YE-5]
Length = 762
Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
Query: 100 LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM--AWGLDIII 157
+ F I V + N+LA+PI++ V++P L+A+++M+LSL P +M WGL +I
Sbjct: 391 VAWQFSFISVAAPVINLLAVPIVTLVIVPLCLLAVVMMLLSLPYWPQLMMLIDWGLQFLI 450
Query: 158 HIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+ + + I IP ++ + L ++ + + ++ + ++ P
Sbjct: 451 EKLNIMGAWPEAAYSIQSIPAFVWLCFSIATLAVLLPRGLVSRGWPVVFCLPLLTYALTP 510
Query: 217 YSFSPDLLISEKGNLVALV 235
+ + + G +++V
Sbjct: 511 NPRDWQINVLDVGQGLSVV 529
Score = 37.9 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 31/221 (14%), Positives = 68/221 (30%), Gaps = 19/221 (8%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
+S + P ++ +L PP G A G F + + + I A GY
Sbjct: 123 VSWARPKWPVKQGQVVQLWVKLKPPHGLANQGGFHYQQWLFSQAIMATGY---------V 173
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV--YGL-----IA 114
N +++Q L+ + T A++ + H + + L IA
Sbjct: 174 KAHENNVLLVSHVTVRQRLLDSLIELELTTMPWIAAL-SLGHRGLLSPDDWSLVQRTGIA 232
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR 174
+++AI L ++ + + L I + + +
Sbjct: 233 HLIAISGLHLALVASLCYLFIASALLFCYRVLIKTQNANFYFISVLITLVATLGYAYLAG 292
Query: 175 IPETSFVTIVVEFLLMVFCKTN--IRHIGSIMIGITIIILF 213
+ + ++ L + R ++I + I+
Sbjct: 293 LGLPALRAWLMLALTACLLLSRIHWRFKRILLISVGAFIVL 333
>gi|330985576|gb|EGH83679.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. lachrymans str. M301315]
Length = 738
Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHIAHRISV 165
I + G AN+LA+P +S +V+P L+ LL+ + + + L+ + ++
Sbjct: 376 ISLSGPFANLLAVPWVSLIVLPPALLGTLLLPVPVVGEGLLWLAGGALEWLFMFLGWVAA 435
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
+ +P +++ ++ +++ K +R +G ++ + + + ++L
Sbjct: 436 VLPAWLPSAMPGWAWLLSLLGAFILLLPKGVPMRPLGWPLLLLCVFPPLDSVPAGQVEVL 495
Query: 225 ISEKGNLVALV 235
+ G +A++
Sbjct: 496 QLDVGQGLAIL 506
Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 79/250 (31%), Gaps = 12/250 (4%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+L P+G P FD+ + I A G + + + +++
Sbjct: 124 GERWRMAVKLKRPAGLVNPDAFDYEAWLLAQRIGATGTVVDGQLLTPARGAWRDLIRQRL 183
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
++ A + + + + G + ++L I ++ + A
Sbjct: 184 LAVDAQGREGGLAALVLGDGSG---LSSTDWQVLQDTGTV-HLLVISGQHIGLLAGVIYA 239
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
++ L A I+ G ++V +L+
Sbjct: 240 LVA---GLARWGLWPRALPWLPCACALAFIAALGYGLLAGFEVPVRRACVMVAMVLL--W 294
Query: 194 KTNIRHIGSI---MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
+ RH+G + ++ +++F + P +S + ++ + + ++ S+
Sbjct: 295 RLRFRHLGVVWPLLLSFNAVLIFEPLVTLQPGFWLSFAAVGILVLIFSGRLGAWNWWQSW 354
Query: 251 IFSQWKSALI 260
+QW A+
Sbjct: 355 TRAQWLIAIG 364
>gi|331012615|gb|EGH92671.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 734
Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHIAHRISV 165
I + G AN+LA+P +S +V+P L+ LL+ + + + L+ + ++
Sbjct: 372 ISLSGPFANLLAVPWVSLIVLPPALLGTLLLPVPVVGEGLLWLAGGALEWLFMFLGWVAA 431
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
+ +P +++ ++ +++ K +R +G ++ + + + ++L
Sbjct: 432 VLPAWLPSAMPGWAWLLSLLGAFILLLPKGVPMRPLGWPLLLLCVFPPLDSVPAGQVEVL 491
Query: 225 ISEKGNLVALV 235
+ G +A++
Sbjct: 492 QLDVGQGLAIL 502
Score = 39.8 bits (91), Expect = 0.76, Method: Composition-based stats.
Identities = 30/251 (11%), Positives = 83/251 (33%), Gaps = 14/251 (5%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+L P+G P FD+ + I A G + + + +++
Sbjct: 120 GERWRMAVKLKRPAGLVNPDAFDYEAWLLAQRIGATGTVVDGQLLTPARGALRDLIRQRL 179
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
++ A + + + + G + ++L I ++ + A
Sbjct: 180 LAVDAQGREGGLAALVLGDGSG---LSSTDWQVLQDTGTV-HLLVISGQHIGLLAGVIYA 235
Query: 134 ILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
++ L A L +A ++ + +P +V +++
Sbjct: 236 LVA---GLARWGLWPRALPWLPWACALAFIAALGYGLLAGFEVPVRRACVMVA---MVLL 289
Query: 193 CKTNIRHIGSI---MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ RH+G + ++ +++F + P +S + ++ + + ++ S
Sbjct: 290 WRLRFRHLGVVWPLLLSFNAVLIFEPLVTLQPGFWLSFAAVGILVLIFSGRLGAWNWWQS 349
Query: 250 FIFSQWKSALI 260
+ +QW A+
Sbjct: 350 WTRAQWLIAIG 360
>gi|257487569|ref|ZP_05641610.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 738
Score = 61.7 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHIAHRISV 165
I + G AN+LA+P +S +V+P L+ LL+ + + + L+ + ++
Sbjct: 376 ISLSGPFANLLAVPWVSLIVLPPALLGTLLLPVPVVGEGLLWLAGGALEWLFMFLGWVAA 435
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
+ +P +++ ++ +++ K +R +G ++ + + + ++L
Sbjct: 436 VLPAWLPSAMPGWAWLLSLLGAFILLLPKGVPMRPLGWPLLLLCVFPPLDSVPAGQVEVL 495
Query: 225 ISEKGNLVALV 235
+ G +A++
Sbjct: 496 QLDVGQGLAIL 506
Score = 39.8 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 30/251 (11%), Positives = 83/251 (33%), Gaps = 14/251 (5%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+L P+G P FD+ + I A G + + + +++
Sbjct: 124 GERWRMAVKLKRPAGLVNPDAFDYEAWLLAQRIGATGTVVDGQLLTPARGALRDLIRQRL 183
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
++ A + + + + G + ++L I ++ + A
Sbjct: 184 LAVDAQGREGGLAALVLGDGSG---LSSTDWQVLQDTGTV-HLLVISGQHIGLLAGVIYA 239
Query: 134 ILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
++ L A L +A ++ + +P +V +++
Sbjct: 240 LVA---GLARWGLWPRALPWLPWACALAFIAALGYGLLAGFEVPVRRACVMVA---MVLL 293
Query: 193 CKTNIRHIGSI---MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ RH+G + ++ +++F + P +S + ++ + + ++ S
Sbjct: 294 WRLRFRHLGVVWPLLLSFNAVLIFEPLVTLQPGFWLSFAAVGILVLIFSGRLGAWNWWQS 353
Query: 250 FIFSQWKSALI 260
+ +QW A+
Sbjct: 354 WTRAQWLIAIG 364
>gi|320327720|gb|EFW83728.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 734
Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHIAHRISV 165
I + G AN+LA+P +S +V+P L+ LL+ + + + L+ + ++
Sbjct: 372 ISLSGPFANLLAVPWVSLIVLPPALLGTLLLPVPVVGEGLLWLAGGALEWLFMFLGWVAA 431
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
+ +P +++ ++ +++ K +R +G ++ + + + ++L
Sbjct: 432 VLPAWLPSAMPGWAWLLSLLGAFILLLPKGVPMRPLGWPLLLLCVFPPLDSVPAGQAEVL 491
Query: 225 ISEKGNLVALV 235
+ G +A++
Sbjct: 492 QLDVGQGLAIL 502
Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 79/250 (31%), Gaps = 12/250 (4%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+L P+G P FD+ + I A G + + + +++
Sbjct: 120 GERWRMAVKLKRPAGLVNPDAFDYEAWLLAQRIGATGTVVDGQLLTPARGAWRDLIRQRL 179
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
++ A + + + + G + ++L I ++ + A
Sbjct: 180 LAVDAQGREGGLAALVLGDGSG---LSSTDWQVLQDTGTV-HLLVISGQHIGLLAGVIYA 235
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
++ L A I+ G ++V +L+
Sbjct: 236 LVA---GLARWGLWPRALPWLPCACALAFIAALGYGLLAGFEVPVRRACVMVAMVLL--W 290
Query: 194 KTNIRHIGSI---MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
+ RH+G + ++ +++F + P +S + ++ + + ++ S+
Sbjct: 291 RLRFRHLGVVWPLLLSFNAVLIFEPLVTLQPGFWLSFAAVGILVLIFSGRLGAWNWWQSW 350
Query: 251 IFSQWKSALI 260
+QW A+
Sbjct: 351 TRAQWLIAIG 360
>gi|300312085|ref|YP_003776177.1| transporter DNA uptake transmembrane protein [Herbaspirillum
seropedicae SmR1]
gi|300074870|gb|ADJ64269.1| transporter DNA uptake transmembrane protein [Herbaspirillum
seropedicae SmR1]
Length = 829
Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 68/206 (33%), Gaps = 9/206 (4%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + + P+ + ++ S W + +K++ + +G
Sbjct: 387 GFWLSFGAVGLLLYGSVGRMQPPRAMAAAASRKHWWPALVQRLKEASHAQYLVTLGLVPL 446
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
F + G IAN +AIP++S V+ P L+ +L L + L
Sbjct: 447 TVLL------FGQYSLIGPIANAVAIPLVSLVITPLALLGSVL-PTVLAQFVLQLPHALL 499
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI--RHIGSIMIGITIII 211
+ +S +P + + +++ R +G ++
Sbjct: 500 AWLAGFLQGLSAMPWAVWQTPVPSWWMFALAMGGTMLLLAPRGWPVRWLGWFGWLPLLLN 559
Query: 212 LFTFPYSFSPDLLISEKGNLVALVDK 237
P S + + G +A++ +
Sbjct: 560 APMAPAEGSMRVTAFDVGQGMAVLVE 585
>gi|308274661|emb|CBX31260.1| hypothetical protein N47_E47720 [uncultured Desulfobacterium sp.]
Length = 835
Score = 61.0 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 67/170 (39%), Gaps = 12/170 (7%)
Query: 25 PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEI 84
PPS F F +F S + +G Y++ + E W + FL +
Sbjct: 352 PPS--LFMISFQLSFISVF--FIVLGMNYTLYRKNKKDEVDKGWLPGLRRKVTAFFLVSL 407
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LD 142
A IGT ++ +F+ I + GL AN +A+P++ F V+ AGL++ L LS L
Sbjct: 408 FATIGTL------PVVMYYFNRISLVGLAANCIAVPLIGFAVVSAGLLSFALHPLSIVLS 461
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
+ L+ + I + P + + FL VF
Sbjct: 462 VWLIKADSVILEFALEILKYFAQLPFSAVKTVTPSVFEIVLYYLFLFTVF 511
>gi|89100803|ref|ZP_01173655.1| late competence protein (DNA uptake) [Bacillus sp. NRRL B-14911]
gi|89084449|gb|EAR63598.1| late competence protein (DNA uptake) [Bacillus sp. NRRL B-14911]
Length = 615
Score = 60.6 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 70/189 (37%), Gaps = 21/189 (11%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDN 143
+ +++ ++ F+ I ++ L AN+L IP SF+++P L+ LL IL
Sbjct: 364 VAVSLAAQLASAPIILFFFYEISLFALFANLLYIPFFSFILLPGILLGFLLHILSGGNAG 423
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL--LMVFCKTNIRHIG 201
+ V+ W + A ++ + P + + + + L++ + H
Sbjct: 424 LILQVLEWSAGMANLAAGKLGSLPGAVLVLGKPSGPALAMYITGVPALLIIWERKKEHFT 483
Query: 202 SIMIGITIIILFTFPYSFSPDLLISEKGNL--VALVDKNTLISNYSNPPS---------- 249
M+ +++ P S KG + + + ++++ +
Sbjct: 484 LKMVAGMLLLFSFQPLEQK----FSPKGEITFLDVGQGDSILVSLPYGKGDYLIDTGGRL 539
Query: 250 -FIFSQWKS 257
F +W+
Sbjct: 540 QFETEEWEK 548
>gi|152981628|ref|YP_001352958.1| DNA internalization-related competence protein ComEC/Rec2
[Janthinobacterium sp. Marseille]
gi|151281705|gb|ABR90115.1| DNA internalization-related competence protein ComEC/Rec2
[Janthinobacterium sp. Marseille]
Length = 804
Score = 60.6 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 57/182 (31%), Gaps = 13/182 (7%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + ++ I Y + W ++ +
Sbjct: 372 FWLSFGAVAVILYVSVGRARAPVKAGQSRWRVALRNA----------GMTQYAVTIGLVP 421
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
+ F + +AN +AIP++SF+V P L+ +L L V W + +
Sbjct: 422 LTVLMFGQASLVSPLANAIAIPLVSFLVTPLALVGSVL-PAPLSGWCLQVAHWLVQELAQ 480
Query: 159 IAHRISVAHNEFCIGRIPETS-FVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFP 216
+ +S IP F + + M+ + R++G ++ T P
Sbjct: 481 LLTWMSSWQLAVWTVPIPSWWMFALALFGTVWMLAPRGWPARYLGLFAWLPLLLNTATHP 540
Query: 217 YS 218
+
Sbjct: 541 RA 542
>gi|253998347|ref|YP_003050410.1| DNA internalization-like competence protein ComEC/Rec2
[Methylovorus sp. SIP3-4]
gi|253985026|gb|ACT49883.1| DNA internalization-related competence protein ComEC/Rec2
[Methylovorus sp. SIP3-4]
Length = 793
Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 62/193 (32%), Gaps = 12/193 (6%)
Query: 51 YFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY 110
+ P S + + I + + L+ F + +
Sbjct: 364 WAVMAPGFWLSFGAVAVMAFAGAYRIGMLAKWRQAVHAQWAVTLGLLPLLLLLFQQVSLV 423
Query: 111 GLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF 170
+AN +AIP++S V+P L LL I SL + +M + +A +
Sbjct: 424 SPLANAIAIPVVSLGVVPLVLAGTLLPIDSLLWLAHALMQVVTQAMHWLAVSPWAVWQQQ 483
Query: 171 CIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKG 229
P S + + M+ + +R +G + + ++I P+ L
Sbjct: 484 AP---PAWSLLPAMAGIFWMLLPRGFPLRWLGWMGLLPMLLI--------RPEPLPDGAM 532
Query: 230 NLVALVDKNTLIS 242
+V L +
Sbjct: 533 RVVMLDVGQGMAV 545
>gi|171059289|ref|YP_001791638.1| DNA internalization-like competence protein ComEC/Rec2 [Leptothrix
cholodnii SP-6]
gi|170776734|gb|ACB34873.1| DNA internalization-related competence protein ComEC/Rec2
[Leptothrix cholodnii SP-6]
Length = 833
Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 75/195 (38%), Gaps = 14/195 (7%)
Query: 48 AIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCI 107
A+ +E + +++ + ++ A+IG + + + F+ +
Sbjct: 376 AVALLGGSTPASAGAERPQGFVATARAALHAGWRSQWVASIGL------APWTLIFFNQV 429
Query: 108 PVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
GL+AN LAIP+++ ++ P L+ +L+ + + A ++ ++ ++
Sbjct: 430 SAVGLLANSLAIPLVTLLITPLALLGVLMPP------CWSLAAGLIESMMVALQWLAGWP 483
Query: 168 NE-FCIGRIPETSFVTIVVEFLLMVF-CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI 225
+ + P + L++ +R +G + + L P + DLL
Sbjct: 484 GASWQVPAAPAWAQCLGAAGAALLILPWPVAVRLLGGAFLLPMLWPLVPRPPAGDFDLLG 543
Query: 226 SEKGNLVALVDKNTL 240
+ G A++ +
Sbjct: 544 VDVGQGNAVLVRTAR 558
>gi|77918648|ref|YP_356463.1| DNA internalization-related competence protein ComEC/Rec2
[Pelobacter carbinolicus DSM 2380]
gi|77544731|gb|ABA88293.1| DNA internalization-related competence protein ComEC/Rec2
[Pelobacter carbinolicus DSM 2380]
Length = 785
Score = 60.2 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/219 (15%), Positives = 85/219 (38%), Gaps = 22/219 (10%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + G+ I F + S W++++ I + + + +
Sbjct: 353 SFQLSFAGVFGILIFLPRWSRMLPDMSMR---WRRVAQIGM---------VTPAATITTT 400
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDI 155
F++ HFH + GL+ N+ A P+ + ++IPAGL+ ++L + + F M
Sbjct: 401 PFVLWHFHLVAPAGLLVNLWAGPLFAGLIIPAGLLGLILTPVWPTGAAGCFRGMGMVTAW 460
Query: 156 IIHIAHRISVAHNEFCIG-RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
I+ + + +P +S + I + ++++ R ++++ + L
Sbjct: 461 ILGASEPLLNIPALGPRQLYLPGSSLLLISLMVVILLL---PWRKWHALLLLTLALALGL 517
Query: 215 FPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFS 253
+P L ++ ++ + L+ + ++
Sbjct: 518 WPAPHPEQLRVTA----FSVGQGDALLVSDKAGRHYLID 552
>gi|81241712|gb|ABB62422.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
Length = 780
Score = 60.2 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 60/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 406 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLAGRSLALLFW-- 463
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++ +
Sbjct: 464 GLKSLPEGWINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKP 520
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 521 RPDEWQVYMLDVGQGLAMVIARNGKAI 547
>gi|296333284|ref|ZP_06875737.1| DNA channel for uptake in competent cells [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|296149482|gb|EFG90378.1| DNA channel for uptake in competent cells [Bacillus subtilis subsp.
spizizenii ATCC 6633]
Length = 776
Score = 59.8 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/174 (13%), Positives = 61/174 (35%), Gaps = 10/174 (5%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN- 143
A + + L+ HF + + N++ +P +F V+P + + L+ LS+
Sbjct: 355 LAMVSMIAQLGSLPILLYHFQQFSIISIPMNMVLVPFYTFCVLPGAIAGVFLLSLSVSAG 414
Query: 144 -----IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR 198
+M+W +I IA I P + + + + ++++ R
Sbjct: 415 RLFFGWFDFLMSWANKLITKIAE----IDVFTIIIARPAPALLFLFIATIILLLMAIEKR 470
Query: 199 HIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIF 252
+M+ + P L + +++ + +++ + +
Sbjct: 471 SFSQLMVTGGMCCAVLSLLFIYPRLSSEGEVDMIDIGQGDSMYVGAPHQRGHVL 524
>gi|313206279|ref|YP_004045456.1| comec/rec2-related protein [Riemerella anatipestifer DSM 15868]
gi|312445595|gb|ADQ81950.1| ComEC/Rec2-related protein [Riemerella anatipestifer DSM 15868]
gi|315023039|gb|EFT36052.1| Competence protein [Riemerella anatipestifer RA-YM]
gi|325336279|gb|ADZ12553.1| ComEC/Rec2-related protein [Riemerella anatipestifer RA-GD]
Length = 602
Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/209 (14%), Positives = 72/209 (34%), Gaps = 30/209 (14%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISS 75
+ G+ L + F F +FS+ +G ++ MI + KI
Sbjct: 332 ALAGLGILMVDTQELFSVGFQLSFSA------VLGIYWFNRPMIRLFPNPRN----KIQK 381
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ + T +I +FH + ++AN++ +P++ V+I L ++
Sbjct: 382 LLLYTF-----TMSTAAQLGTMPIVIYYFHQYSAWSILANLVVLPLMEIVII---LSFLM 433
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI-----PETSFVTIVVEFLLM 190
++ L I + +++ D +I + + +G V +
Sbjct: 434 TIVFGL-GIYWNWLSFTYDWLIKALLWLIGFFGKIEMGYFQDIPLSIWEMGVWAVGLYFL 492
Query: 191 ------VFCKTNIRHIGSIMIGITIIILF 213
+ +R + S+++ I +
Sbjct: 493 REILIRFTWRGFMRLMFSVLLFFGIKMWL 521
>gi|264677308|ref|YP_003277214.1| DNA internalization-related competence protein [Comamonas
testosteroni CNB-2]
gi|262207820|gb|ACY31918.1| DNA internalization-related competence protein [Comamonas
testosteroni CNB-2]
Length = 806
Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 57/134 (42%), Gaps = 8/134 (5%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F + + GL+AN+LAIP ++ VV P L+A +L + + + ++ + +
Sbjct: 425 FGQVSIVGLLANLLAIPWVTLVVTPLALLAAVLPMAASAAAVAMLP------LMSLLQWL 478
Query: 164 SVAHNEFCIGRIPETS--FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ P + I L++ +R + +I + + ++P +
Sbjct: 479 AALPGAVWALPQPAWWASVLAIAAGLLVIAPLPLRLRLVAAIFVLPALFWPRSWPRAGEF 538
Query: 222 DLLISEKGNLVALV 235
+LL ++ G A++
Sbjct: 539 ELLAADIGQGNAVI 552
>gi|254454186|ref|ZP_05067623.1| competence protein, putative [Octadecabacter antarcticus 238]
gi|198268592|gb|EDY92862.1| competence protein, putative [Octadecabacter antarcticus 238]
Length = 172
Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 12 PAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSI--PKMIYSSESHNTWT 69
+ LSPPSGP PG FDF ++++G+ A+GY + S + W
Sbjct: 36 EPGQVVLMTGHLSPPSGPVEPGGFDFQRMAWFEGLGAVGYTRTPVLLGAEASEAAAGLWV 95
Query: 70 WKKISSIKQSFLNEIRANIGTYGSAS 95
+++ +I + + + G + +A
Sbjct: 96 YRQRVAISRGVQDRLNGESGAFAAAI 121
>gi|299530851|ref|ZP_07044266.1| DNA internalization-related competence protein [Comamonas
testosteroni S44]
gi|298721367|gb|EFI62309.1| DNA internalization-related competence protein [Comamonas
testosteroni S44]
Length = 829
Score = 59.8 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 58/134 (43%), Gaps = 8/134 (5%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F + V GL+AN+LAIP ++ VV P L+A +L + + + ++ + +
Sbjct: 448 FGQVSVVGLLANLLAIPWVTLVVTPLALLAAVLPMAASAAAVAMLP------LMSLLQWL 501
Query: 164 SVAHNEFCIGRIPETS--FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ P + IV L++ +R + +I + + ++P +
Sbjct: 502 AALPGAVWALPQPAWWASVLAIVAGLLVIAPLPLRLRLVAAIFVLPALFWPRSWPRAGEF 561
Query: 222 DLLISEKGNLVALV 235
+LL ++ G A++
Sbjct: 562 ELLAADIGQGNAVI 575
>gi|260590117|ref|ZP_05856030.1| DNA internalization-related competence protein ComEC/Rec2 [Blautia
hansenii DSM 20583]
gi|260539629|gb|EEX20198.1| DNA internalization-related competence protein ComEC/Rec2 [Blautia
hansenii DSM 20583]
Length = 752
Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/197 (14%), Positives = 59/197 (29%), Gaps = 20/197 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D +F + I +G T K + I
Sbjct: 293 LYDSSFLLSFGAILGLGLVQPALFSKKMQRGKKTLGEKIKNLFMDGIKGGIAVWAVLL-- 350
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM----ILS--LDNIPFG 147
++ F+ I V+G+I N+L +P ++I + ++L M L +
Sbjct: 351 ----PMMMYFFYEISVFGIIINLLVLPTAGILLISGCVGSLLGMCGIIPLGKLVTAPALL 406
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC---KTNIR-HIGSI 203
+ L+ I + I I P L ++ + R I
Sbjct: 407 I----LEAYISVGKTIQNIPFAVWITGKPALWKCVCYYVVLFLLLWIKKQKRWRKFFYGI 462
Query: 204 MIGITIIILFTFPYSFS 220
++ +++ P+
Sbjct: 463 LVFCILLLYGKLPWETR 479
>gi|332799039|ref|YP_004460538.1| DNA internalization-related competence protein ComEC/Rec2
[Tepidanaerobacter sp. Re1]
gi|332696774|gb|AEE91231.1| DNA internalization-related competence protein ComEC/Rec2
[Tepidanaerobacter sp. Re1]
Length = 781
Score = 59.8 bits (143), Expect = 8e-07, Method: Composition-based stats.
Identities = 45/226 (19%), Positives = 91/226 (40%), Gaps = 40/226 (17%)
Query: 1 MLS--ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM 58
ML+ + +K DP T+ A P LF +F Y + I F++ K+
Sbjct: 305 MLAKVVGRKNDPI---NTLCLSATFLLFMNPLT--LFSISFQLSYAAVLGIMLFFAPLKL 359
Query: 59 IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILA 118
I K ++ S + A + + FL +F+ I + G + NIL
Sbjct: 360 ILE---------KLPRYLRDSIAVMVSAQL------TVWPFLAYYFNSISLIGFVTNILV 404
Query: 119 IPILSFVVIPAGLIAILLMILSLDNI-PFGVMAWGLDIIIHIAHRISVAHN--EFCIGRI 175
IP++S ++I + I+ ++ + V ++ ++ IA +I + ++ F +
Sbjct: 405 IPLVSIILISGLISGIIGLLFTFAGPLFMTVPSF----LLKIAEKIILINSKLPFSTIIV 460
Query: 176 PETSFVTIVVEFLLMVFC-----------KTNIRHIGSIMIGITII 210
P ++IV+ F+ +V + R I++ + +I
Sbjct: 461 PAIPPISIVLYFMFLVLMFDFVPSFGKIESRHKRLCAVILMFLALI 506
>gi|282899246|ref|ZP_06307219.1| ComEC/Rec2-related protein [Cylindrospermopsis raciborskii CS-505]
gi|281195882|gb|EFA70806.1| ComEC/Rec2-related protein [Cylindrospermopsis raciborskii CS-505]
Length = 779
Score = 59.4 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 65/169 (38%), Gaps = 15/169 (8%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDN 143
++ + L+ F + +Y + NI+A P++S + + + ++ + LS L
Sbjct: 403 LISVPLAATIWTLPLLLHIFSTVAIYSVPLNIIATPLISILSMGGMISGLVSLPLSDLGG 462
Query: 144 IPFGVMAWGLDIIIHIAHRI-SVAHNEFCIGRIPETSFVT---IVVEFLLMVFCKTNIRH 199
+ + I+I +A ++ N G I + ++V L+ + +
Sbjct: 463 YVASFLYYPAHILIKMAEFFDNLPGNSLNTGSISIWQMLIIYGLIVATCLVPWWQKRWWL 522
Query: 200 IGSIMIGITIIILF----------TFPYSFSPDLLISEKGNLVALVDKN 238
G I + ++ ++ + P L+I ++G + + +
Sbjct: 523 AGLIATILAVVPIWYYTSNLLKITLLATNSEPVLVIQDRGQVTLINSGD 571
>gi|305675212|ref|YP_003866884.1| DNA channel for uptake in competent cells [Bacillus subtilis subsp.
spizizenii str. W23]
gi|305413456|gb|ADM38575.1| DNA channel for uptake in competent cells [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 771
Score = 59.4 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/174 (13%), Positives = 61/174 (35%), Gaps = 10/174 (5%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN- 143
A + + L+ HF + + N++ +P +F V+P + + L+ LS+
Sbjct: 350 LAMVSMIAQLGSLPILLYHFQQFSIISIPMNMVLVPFYTFCVLPGAIAGVFLLSLSVSAG 409
Query: 144 -----IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR 198
+M+W +I IA I P + + + + ++++ R
Sbjct: 410 RLFFGWFDFLMSWANKLITKIAE----IDVFTIIIARPAPALLFLFIATIILLLMAIEKR 465
Query: 199 HIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIF 252
+M+ + P L + +++ + +++ + +
Sbjct: 466 SFSQLMVTGGMCCAVLSLLFIYPRLSSEGEVDMIDIGQGDSMYVGAPHQRGHVL 519
>gi|331651933|ref|ZP_08352952.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli M718]
gi|331050211|gb|EGI22269.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli M718]
Length = 780
Score = 59.4 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 75/199 (37%), Gaps = 26/199 (13%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 357 AAAVAALIFWYQWFPCPEWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTS 413
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+LAIP+++F+ +P L A+++ + L L+ + + L ++ S+
Sbjct: 414 FIANLLAIPLVTFITVPLILAAMVVHLSVPLILEQGLWFLADRSLALLFW--GLKSLPEG 471
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD----- 222
I + + L+V + N R + ++ + + +++ + PD
Sbjct: 472 WINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPDEWQVY 528
Query: 223 ---------LLISEKGNLV 232
++I+ G +
Sbjct: 529 MLDVGQGLAMVIARNGKAI 547
>gi|253996016|ref|YP_003048080.1| DNA internalization-like competence protein ComEC/Rec2
[Methylotenera mobilis JLW8]
gi|253982695|gb|ACT47553.1| DNA internalization-related competence protein ComEC/Rec2
[Methylotenera mobilis JLW8]
Length = 795
Score = 59.4 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 10/112 (8%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH + +AN +AIP++SF V P L+ L L L L + +
Sbjct: 411 FHQASIISPLANAIAIPLISFFVTPLALLGSFLPMDWPLHLAYSLLDACVVFLRWLNQLP 470
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIII 211
+ H + + + M+ + +R +G + + ++I
Sbjct: 471 VAVWQQHAP------AGWTLAPALFGVVWMLLPRGWPLRWLGVLGLLPMLLI 516
>gi|228902851|ref|ZP_04066994.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis IBL 4222]
gi|228856775|gb|EEN01292.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis IBL 4222]
Length = 659
Score = 59.4 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 64/167 (38%), Gaps = 26/167 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F + + S P ++ SS I+ S I + +
Sbjct: 212 GFQFSFVGSFALL------LSAPFLLGSSNGV----------IRNSIYISIISQL----- 250
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAW 151
++ L+ HF Y + N+L +P LS +V+P +I +L M + L V++
Sbjct: 251 -VSTPILLYHFGYFSPYSIFLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGFANVLSI 309
Query: 152 GLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTN 196
GL + +++ S+ + G+ P + +++ +
Sbjct: 310 GLSMSNDFLSYCESLPFTQLVFGKTPFNLVAVYCASIVSILMVWERR 356
>gi|75763392|ref|ZP_00743125.1| COME operon protein 3 [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|74489121|gb|EAO52604.1| COME operon protein 3 [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 748
Score = 59.4 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 64/167 (38%), Gaps = 26/167 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F + + S P ++ SS I+ S I + +
Sbjct: 301 GFQFSFVGSFALL------LSAPFLLGSSNGV----------IRNSIYISIISQL----- 339
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAW 151
++ L+ HF Y + N+L +P LS +V+P +I +L M + L V++
Sbjct: 340 -VSTPILLYHFGYFSPYSIFLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGFANVLSI 398
Query: 152 GLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTN 196
GL + +++ S+ + G+ P + +++ +
Sbjct: 399 GLSMSNDFLSYCESLPFTQLVFGKTPFNLVAVYCASIVSILMVWERR 445
>gi|301047826|ref|ZP_07194878.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 185-1]
gi|300300318|gb|EFJ56703.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 185-1]
Length = 411
Score = 59.4 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 67/178 (37%), Gaps = 25/178 (14%)
Query: 75 SIKQSFLNEIRA--NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI 132
SI+ L + + ++ + I FH I + IAN+ AIP+++F+ +P L
Sbjct: 6 SIRSPVLRAVVSLIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFITVPLILA 65
Query: 133 AILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL 189
A+++ L+ + + L ++ S+ I + + L
Sbjct: 66 AMVVHLSGPFILEQGLWFLADRSLALLFW--GLKSLPEGWINIAERWQW---LTFSPWFL 120
Query: 190 MVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD--------------LLISEKGNLV 232
+V + N R + ++ + + +++ PD ++I+ G +
Sbjct: 121 LVVWRLNAWRTLPAMCVAVGLLMCLPLWQKPRPDEWQVYMLDVGQGLAMVIARNGKAI 178
>gi|309787784|ref|ZP_07682394.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
dysenteriae 1617]
gi|308924183|gb|EFP69680.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
dysenteriae 1617]
Length = 754
Score = 59.4 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 60/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 380 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLAGRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++ +
Sbjct: 438 GLKSLPEGWINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|161950089|ref|YP_403913.2| hypothetical protein SDY_2345 [Shigella dysenteriae Sd197]
Length = 754
Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 60/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 380 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLAGRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++ +
Sbjct: 438 GLKSLPEGWINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|229093395|ref|ZP_04224500.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock3-42]
gi|228689989|gb|EEL43792.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock3-42]
Length = 693
Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
I ++ L+ HF Y + NIL +P LS +V+P +I ++ M + L
Sbjct: 278 ISLISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCSIIVLICMPIIPFLAKSF 337
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGSI 203
V++ GL++ +++ S+ G+ P V + +++ + I G +
Sbjct: 338 ANVLSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRI-SKGMM 396
Query: 204 MIGITIIILFTFPYSFSP 221
I I + + + P
Sbjct: 397 FIFAGIFLFISTGHYVYP 414
>gi|327402303|ref|YP_004343141.1| ComEC/Rec2-like protein [Fluviicola taffensis DSM 16823]
gi|327317811|gb|AEA42303.1| ComEC/Rec2-related protein [Fluviicola taffensis DSM 16823]
Length = 646
Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 69/194 (35%), Gaps = 23/194 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIP--KMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTY 91
LFD F Y + I + + P K+IY S W WK + +G
Sbjct: 342 LFDIGFQLSYVALVGI-FLFQTPIYKLIYVSNKPLDWIWKGSA-------------VGIA 387
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVV--IPAGLIAILLMILSLDNIPFGVM 149
+ + + F++ FH P Y L++NI+ + +L FVV +P L+A + + +
Sbjct: 388 ATITTTPFMLYWFHQFPNYFLLSNIVVM-LLGFVVLLLPIILMATAWIPY-FKTLIIFLT 445
Query: 150 AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV---FCKTNIRHIGSIMIG 206
A L ++I ++ G + + F + G+ +
Sbjct: 446 ALSLQLLILGIQWVNDIPGGVSAGFELSFVEFLVTASLIGFCAHQFLVRKLIPKGAFLAL 505
Query: 207 ITIIILFTFPYSFS 220
L ++
Sbjct: 506 ALCFFLISWKREEK 519
>gi|297537852|ref|YP_003673621.1| DNA internalization-like competence protein ComEC/Rec2
[Methylotenera sp. 301]
gi|297257199|gb|ADI29044.1| DNA internalization-related competence protein ComEC/Rec2
[Methylotenera sp. 301]
Length = 808
Score = 59.0 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 52/155 (33%), Gaps = 10/155 (6%)
Query: 51 YFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY 110
+ S P S + + + Q+ + + L+ F V
Sbjct: 375 WAVSSPGFWLSFGAVAMLAYALGGRVGQAHWFQAALKTQYAVTIGMLPLLLVLFGQASVI 434
Query: 111 GLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
IAN AIP++SFVV P L+ L L+L V L + + I H
Sbjct: 435 SPIANAFAIPLISFVVTPLALLGSFLPIDTPLNLSYEALEVGMLALKWLNQLPAAIWQQH 494
Query: 168 NEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIG 201
+ + ++ L ++ + +R +G
Sbjct: 495 EP------AAWTLIPAMLGVLWLLLPRGFPMRWMG 523
>gi|298486204|ref|ZP_07004267.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|298159211|gb|EFI00269.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
Length = 432
Score = 58.7 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISV 165
I + G AN+LA+P +S +V+P L+ LL+ + + + L+ + ++
Sbjct: 70 ISLSGPFANLLAVPWVSLIVLPPALLGTLLLPVSGVGEGLLWLAGGALEWLFMFLGWVAA 129
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
+ +P +++ ++ +++ K +R +G ++ + + ++L
Sbjct: 130 VLPAWLPSAMPGWAWLLSLLGAFILLLPKGVPMRLLGWPLLLLCAFPPLDSVPAGQVEVL 189
Query: 225 ISEKGNLVALV 235
+ G +A++
Sbjct: 190 QLDVGQGLAIL 200
>gi|307609424|emb|CBW98913.1| hypothetical protein LPW_07001 [Legionella pneumophila 130b]
Length = 735
Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 55/139 (39%), Gaps = 2/139 (1%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ + + G +AN+ AIP++SF+++P L+ ++ I +AW + +++
Sbjct: 367 PLTLHWYSYGSINGFLANLFAIPLVSFLIVPLALMTMITSPFHWSWILMKPLAWLVALLL 426
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM--VFCKTNIRHIGSIMIGITIIILFTF 215
+ I + + + L + + +H+ + I + + T
Sbjct: 427 QGLTYVEQIAGINITWSITSVTMMLAMTAGLFLRVLLPVKPFKHLAILWIILPLFPPRTA 486
Query: 216 PYSFSPDLLISEKGNLVAL 234
Y + I + G +A+
Sbjct: 487 IYPGEALINILDVGQGLAV 505
>gi|300921050|ref|ZP_07137436.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 115-1]
gi|300411988|gb|EFJ95298.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 115-1]
Length = 754
Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 74/199 (37%), Gaps = 26/199 (13%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 331 AAAVAALIFWYQWFPCPEWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTS 387
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+LAIP+++F+ +P L A+++ L L+ + + L ++ S+
Sbjct: 388 FIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW--GLKSLPEG 445
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD----- 222
I + + L+V + N R + ++ + + +++ + PD
Sbjct: 446 WINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPDEWQVY 502
Query: 223 ---------LLISEKGNLV 232
++I+ G +
Sbjct: 503 MLDVGQGLAIVIARNGKAI 521
>gi|54293610|ref|YP_126025.1| hypothetical protein lpl0663 [Legionella pneumophila str. Lens]
gi|53753442|emb|CAH14897.1| hypothetical protein lpl0663 [Legionella pneumophila str. Lens]
Length = 735
Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 55/139 (39%), Gaps = 2/139 (1%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ + + G +AN+ AIP++SF+++P L+ ++ I +AW + +++
Sbjct: 367 PLTLHWYSYGSINGFLANLFAIPLVSFLIVPLALMTMITSPFHWSWILMKPLAWLVALLL 426
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM--VFCKTNIRHIGSIMIGITIIILFTF 215
+ I + + + L + + +H+ + I + + T
Sbjct: 427 QGLTYVEQIAGINITWSITSVTMMLAMTAGLFLRVLLPVKPFKHLAILWIILPLFPPRTA 486
Query: 216 PYSFSPDLLISEKGNLVAL 234
Y + I + G +A+
Sbjct: 487 IYPGEALINILDVGQGLAV 505
>gi|331676701|ref|ZP_08377397.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli H591]
gi|331075390|gb|EGI46688.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli H591]
Length = 780
Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 74/199 (37%), Gaps = 26/199 (13%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 357 AAAVAALIFWYQWFPCPEWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTS 413
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+LAIP+++F+ +P L A+++ L L+ + + L ++ S+
Sbjct: 414 FIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW--GLKSLPEG 471
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD----- 222
I + + L+V + N R + ++ + + +++ + PD
Sbjct: 472 WINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPDEWQVY 528
Query: 223 ---------LLISEKGNLV 232
++I+ G +
Sbjct: 529 MLDVGQGLAMVIARNGKAI 547
>gi|52840863|ref|YP_094662.1| DNA uptake/competence protein ComA [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54296649|ref|YP_123018.1| hypothetical protein lpp0680 [Legionella pneumophila str. Paris]
gi|52627974|gb|AAU26715.1| DNA uptake/competence protein ComA [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53750434|emb|CAH11828.1| hypothetical protein lpp0680 [Legionella pneumophila str. Paris]
Length = 735
Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 55/139 (39%), Gaps = 2/139 (1%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ + + G +AN+ AIP++SF+++P L+ ++ I +AW + +++
Sbjct: 367 PLTLHWYSYGSINGFLANLFAIPLVSFLIVPLALMTMITSPFHWSWILMKPLAWLVALLL 426
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM--VFCKTNIRHIGSIMIGITIIILFTF 215
+ I + + + L + + +H+ + I + + T
Sbjct: 427 QGLTYVEQIAGINITWSITSVTMMLAMTAGLFLRVLLPVKPFKHLAILWIILPLFPPRTA 486
Query: 216 PYSFSPDLLISEKGNLVAL 234
Y + I + G +A+
Sbjct: 487 IYPGEALINILDVGQGLAV 505
>gi|324012940|gb|EGB82159.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 60-1]
Length = 411
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 65/185 (35%), Gaps = 26/185 (14%)
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W+ ++ ++ + I FH I + IAN+ AIP+++F+
Sbjct: 2 PCRGWRLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 58
Query: 126 VIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L+ + + L ++ S+ I +
Sbjct: 59 TVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW--GLKSLPEGWINIAERWQW---L 113
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD--------------LLISE 227
+ L+V + N R + ++ + + +++ PD ++I+
Sbjct: 114 TFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKPRPDEWQVYMLDVGQGLAMVIAR 173
Query: 228 KGNLV 232
G +
Sbjct: 174 NGKAI 178
>gi|315287560|gb|EFU46966.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 110-3]
Length = 404
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L+ + + L ++
Sbjct: 30 FHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW-- 87
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++
Sbjct: 88 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKP 144
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 145 RPDEWQVYMLDVGQGLAMVIARNGKAI 171
>gi|300983101|ref|ZP_07176445.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 200-1]
gi|300307005|gb|EFJ61525.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 200-1]
Length = 405
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L+ + + L ++
Sbjct: 31 FHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW-- 88
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++
Sbjct: 89 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKP 145
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 146 RPDEWQVYMLDVGQGLAMVIARNGKAI 172
>gi|315291211|gb|EFU50571.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 153-1]
Length = 408
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 65/181 (35%), Gaps = 26/181 (14%)
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
W+ ++ ++ + I FH I + IAN+ AIP+++F+ +P
Sbjct: 3 WRLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFITVPL 59
Query: 130 GLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
L A+++ L+ + + L ++ S+ I +
Sbjct: 60 ILAAMVVHLSGPFILEQGLWFLADRSLALLFW--GLKSLPEGWINIAERWQW---LTFSP 114
Query: 187 FLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD--------------LLISEKGNL 231
+ L+V + N R + ++ + + +++ PD ++I+ G
Sbjct: 115 WFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKPRPDEWQVYMLDVGQGLAMVIARNGKA 174
Query: 232 V 232
+
Sbjct: 175 I 175
>gi|324009866|gb|EGB79085.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 57-2]
Length = 406
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L+ + + L ++
Sbjct: 32 FHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW-- 89
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++
Sbjct: 90 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKP 146
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 147 RPDEWQVYMLDVGQGLAMVIARNGKAI 173
>gi|289649331|ref|ZP_06480674.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Pseudomonas syringae pv. aesculi
str. 2250]
Length = 734
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISV 165
I + G AN+LA+P +S +V+P L+ LL+ + + + L+ + ++
Sbjct: 372 ISLSGPFANLLAVPWVSLIVLPPALLGTLLLPVSGVGEGLLWLAGGALEWLFMFLGWVAA 431
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
+ +P +++ ++ +++ K +R +G ++ + + + ++L
Sbjct: 432 VLPAWLPSAMPGWAWLLSLLGAFILLLPKGVPMRLLGWPLLLLCVFPPLDSVPAGQVEVL 491
Query: 225 ISEKGNLVALV 235
+ G +A++
Sbjct: 492 QLDVGQGLAIL 502
Score = 41.7 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 30/251 (11%), Positives = 83/251 (33%), Gaps = 14/251 (5%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+L P+G P FD+ + I A G + + + +++
Sbjct: 120 GERWRMAVKLKRPAGLVNPDAFDYEAWLLAQRIGATGTVVDGQLLTPARGAWRDLIRQRL 179
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
++ A + + + + G + ++L I ++ + A
Sbjct: 180 LAVDAQGREGGLAALVLGDGSG---LSSTDWQVLQDTGTV-HLLVISGQHIGLLAGVIYA 235
Query: 134 ILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
++ L A L +A ++ + +P +V +++
Sbjct: 236 LVA---GLARWGLWPRALPWLPWACALAFIAALGYGLLAGFEVPVRRACVMVA---MVLL 289
Query: 193 CKTNIRHIGSI---MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ RH+G + ++ +++F + P +S + ++ + + ++ S
Sbjct: 290 WRLRFRHLGVVWPLLLSFNAVLIFEPLVTLQPGFWLSFAAVGILVLIFSGRLGAWNWWQS 349
Query: 250 FIFSQWKSALI 260
+ +QW A+
Sbjct: 350 WTRAQWLIAIG 360
>gi|323175464|gb|EFZ61059.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 1180]
Length = 624
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 60/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 250 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW-- 307
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++ +
Sbjct: 308 GLKSLPEGWINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKP 364
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 365 RPDEWQVYMLDVGQGLAMVIARNGKAI 391
>gi|315296230|gb|EFU55537.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 16-3]
Length = 408
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L+ + + L ++
Sbjct: 34 FHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW-- 91
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++
Sbjct: 92 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKP 148
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 149 RPDEWQVYMLDVGQGLAMVIARNGKAI 175
>gi|289624519|ref|ZP_06457473.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|330869286|gb|EGH03995.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 734
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISV 165
I + G AN+LA+P +S +V+P L+ LL+ + + + L+ + ++
Sbjct: 372 ISLSGPFANLLAVPWVSLIVLPPALLGTLLLPVSGVGEGLLWLAGGALEWLFMFLGWVAA 431
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
+ +P +++ ++ +++ K +R +G ++ + + + ++L
Sbjct: 432 VLPAWLPSAMPGWAWLLSLLGAFILLLPKGVPMRLLGWPLLLLCVFPPLDSVPAGQVEVL 491
Query: 225 ISEKGNLVALV 235
+ G +A++
Sbjct: 492 QLDVGQGLAIL 502
Score = 41.7 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 31/251 (12%), Positives = 84/251 (33%), Gaps = 14/251 (5%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+L P+G P FD+ + I AIG + + + +++
Sbjct: 120 GERWRMAVKLKRPAGLVNPDAFDYEAWLLAQRIGAIGTVVDGQLLTPARGAWRDLIRQRL 179
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
++ A + + + + G + ++L I ++ + A
Sbjct: 180 LAVDAQGREGGLAALVLGDGSG---LSSTDWQVLQDTGTV-HLLVISGQHIGLLAGVIYA 235
Query: 134 ILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
++ L A L +A ++ + +P +V +++
Sbjct: 236 LVA---GLARWGLWPRALPWLPWACALAFIAALGYGLLAGFEVPVRRACVMVA---MVLL 289
Query: 193 CKTNIRHIGSI---MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ RH+G + ++ +++F + P +S + ++ + + ++ S
Sbjct: 290 WRLRFRHLGVVWPLLLSFNAVLIFEPLVTLQPGFWLSFAAVGILVLIFSGRLGAWNWWQS 349
Query: 250 FIFSQWKSALI 260
+ +QW A+
Sbjct: 350 WTRAQWLIAIG 360
>gi|300978428|ref|ZP_07174276.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 45-1]
gi|300409670|gb|EFJ93208.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 45-1]
Length = 406
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 65/181 (35%), Gaps = 26/181 (14%)
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
W+ ++ ++ + I FH I + IAN+ AIP+++F+ +P
Sbjct: 1 WRLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFITVPL 57
Query: 130 GLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
L A+++ L+ + + L ++ S+ I +
Sbjct: 58 ILAAMVVHLSGPFILEQGLWFLADRSLALLFW--GLKSLPEGWINIAERWQW---LTFSP 112
Query: 187 FLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD--------------LLISEKGNL 231
+ L+V + N R + ++ + + +++ PD ++I+ G
Sbjct: 113 WFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKPRPDEWQVYMLDVGQGLAMVIARNGKA 172
Query: 232 V 232
+
Sbjct: 173 I 173
>gi|73854947|gb|AAZ87654.1| conserved hypothetical protein [Shigella sonnei Ss046]
Length = 780
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 60/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 406 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW-- 463
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++ +
Sbjct: 464 GLKSLPEGWINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKP 520
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 521 RPDEWQVYMLDVGQGLAMVIARNGKAI 547
>gi|260867085|ref|YP_003233487.1| hypothetical protein ECO111_0981 [Escherichia coli O111:H- str.
11128]
gi|257763441|dbj|BAI34936.1| conserved predicted inner membrane protein [Escherichia coli
O111:H- str. 11128]
Length = 754
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 60/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 380 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++ +
Sbjct: 438 GLKSLPEGWINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|324117222|gb|EGC11130.1| competence protein [Escherichia coli E1167]
Length = 754
Score = 58.3 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 74/199 (37%), Gaps = 26/199 (13%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 331 AAAVAALIFWYQWFPCPEWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTS 387
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+LAIP+++F+ +P L A+++ L L+ + + L ++ S+
Sbjct: 388 FIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW--GLKSLPEG 445
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD----- 222
I + + L+V + N R + ++ + + +++ + PD
Sbjct: 446 WINIAERWQW---LSFSPWFLLVVWRLNAWRTLSAMCVAVGLLMCWPLWQKPRPDEWQVY 502
Query: 223 ---------LLISEKGNLV 232
++I+ G +
Sbjct: 503 MLDVGQGLAMVIARNGKAI 521
>gi|157155375|ref|YP_001462131.1| hypothetical protein EcE24377A_1011 [Escherichia coli E24377A]
gi|191167003|ref|ZP_03028826.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli B7A]
gi|260854204|ref|YP_003228095.1| hypothetical protein ECO26_1039 [Escherichia coli O26:H11 str.
11368]
gi|300925409|ref|ZP_07141294.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 182-1]
gi|301326624|ref|ZP_07219957.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 78-1]
gi|157077405|gb|ABV17113.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli E24377A]
gi|190902997|gb|EDV62723.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli B7A]
gi|257752853|dbj|BAI24355.1| conserved predicted inner membrane protein [Escherichia coli
O26:H11 str. 11368]
gi|300418479|gb|EFK01790.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 182-1]
gi|300846707|gb|EFK74467.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 78-1]
gi|323157200|gb|EFZ43323.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli EPECa14]
gi|323174986|gb|EFZ60601.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli LT-68]
Length = 754
Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 74/199 (37%), Gaps = 26/199 (13%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 331 AAAVAALIFWYQWFPCPEWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTS 387
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+LAIP+++F+ +P L A+++ L L+ + + L ++ S+
Sbjct: 388 FIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW--GLKSLPEG 445
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD----- 222
I + + L+V + N R + ++ + + +++ + PD
Sbjct: 446 WINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPDEWQVY 502
Query: 223 ---------LLISEKGNLV 232
++I+ G +
Sbjct: 503 MLDVGQGLAMVIARNGKAI 521
>gi|218553500|ref|YP_002386413.1| hypothetical protein ECIAI1_0954 [Escherichia coli IAI1]
gi|293433210|ref|ZP_06661638.1| hypothetical protein ECCG_01335 [Escherichia coli B088]
gi|218360268|emb|CAQ97818.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI1]
gi|291324029|gb|EFE63451.1| hypothetical protein ECCG_01335 [Escherichia coli B088]
gi|323185381|gb|EFZ70745.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 1357]
gi|323947298|gb|EGB43306.1| competence protein [Escherichia coli H120]
Length = 754
Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 74/199 (37%), Gaps = 26/199 (13%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 331 AAAVAALIFWYQWFPCPEWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTS 387
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+LAIP+++F+ +P L A+++ L L+ + + L ++ S+
Sbjct: 388 FIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW--GLKSLPEG 445
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD----- 222
I + + L+V + N R + ++ + + +++ + PD
Sbjct: 446 WINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPDEWQVY 502
Query: 223 ---------LLISEKGNLV 232
++I+ G +
Sbjct: 503 MLDVGQGLAMVIARNGKAI 521
>gi|218694386|ref|YP_002402053.1| hypothetical protein EC55989_0958 [Escherichia coli 55989]
gi|218351118|emb|CAU96822.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli 55989]
Length = 754
Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 74/199 (37%), Gaps = 26/199 (13%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 331 AAAVAALIFWYQWFPCPEWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTS 387
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+LAIP+++F+ +P L A+++ L L+ + + L ++ S+
Sbjct: 388 FIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW--GLKSLPEG 445
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD----- 222
I + + L+V + N R + ++ + + +++ + PD
Sbjct: 446 WINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPDEWQVY 502
Query: 223 ---------LLISEKGNLV 232
++I+ G +
Sbjct: 503 MLDVGQGLAMVIARNGKAI 521
>gi|300816983|ref|ZP_07097202.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 107-1]
gi|300823653|ref|ZP_07103780.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 119-7]
gi|307311700|ref|ZP_07591340.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli W]
gi|331667290|ref|ZP_08368155.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli TA271]
gi|300523853|gb|EFK44922.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 119-7]
gi|300530335|gb|EFK51397.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 107-1]
gi|306908255|gb|EFN38754.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli W]
gi|315060198|gb|ADT74525.1| conserved inner membrane protein [Escherichia coli W]
gi|320202309|gb|EFW76880.1| hypothetical protein ECoL_00355 [Escherichia coli EC4100B]
gi|323379242|gb|ADX51510.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli KO11]
gi|331065646|gb|EGI37539.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli TA271]
Length = 754
Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 74/199 (37%), Gaps = 26/199 (13%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 331 AAAVAALIFWYQWFPCPEWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTS 387
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+LAIP+++F+ +P L A+++ L L+ + + L ++ S+
Sbjct: 388 FIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW--GLKSLPEG 445
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD----- 222
I + + L+V + N R + ++ + + +++ + PD
Sbjct: 446 WINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPDEWQVY 502
Query: 223 ---------LLISEKGNLV 232
++I+ G +
Sbjct: 503 MLDVGQGLAMVIARNGKAI 521
>gi|193070742|ref|ZP_03051677.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli E110019]
gi|192955935|gb|EDV86403.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli E110019]
Length = 754
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 74/199 (37%), Gaps = 26/199 (13%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 331 AAAVAALIFWYQWFPCPEWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTS 387
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+LAIP+++F+ +P L A+++ L L+ + + L ++ S+
Sbjct: 388 FIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW--GLKSLPEG 445
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD----- 222
I + + L+V + N R + ++ + + +++ + PD
Sbjct: 446 WINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPDEWQVY 502
Query: 223 ---------LLISEKGNLV 232
++I+ G +
Sbjct: 503 MLDVGQGLAMVIARNGKAI 521
>gi|310820619|ref|YP_003952977.1| DNA internalization-like competence protein comec/rec2 [Stigmatella
aurantiaca DW4/3-1]
gi|309393691|gb|ADO71150.1| DNA internalization-like competence protein ComEC/Rec2 [Stigmatella
aurantiaca DW4/3-1]
Length = 833
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/202 (10%), Positives = 60/202 (29%), Gaps = 5/202 (2%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ ++ D + + + PS +F + + +
Sbjct: 339 LALWRRADGLNSLAAAAVVLAVWAPSS-VGDLSLQLSFLAVMSLLLLTPALRGAVPIAPP 397
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ +++ L A++ + ++ + F + GLI+NI+ +P+
Sbjct: 398 DAQEKRRLVRIAGQARETILETFCASVAV--TVASLPLVASAFGRASLAGLISNIVCLPL 455
Query: 122 LSFVV-IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETS 179
+ AG A+ + L AW ++++ + + + +
Sbjct: 456 CGLLTGFAAGGAALFTVAPVLATPVLWGGAWTSEVLLVLTRFFAAVPLATVDLPPFGAVT 515
Query: 180 FVTIVVEFLLMVFCKTNIRHIG 201
+ R G
Sbjct: 516 TLLYAAGLGAWALGTGRWRFAG 537
>gi|293414193|ref|ZP_06656842.1| competence protein ComEC/Rec2 [Escherichia coli B185]
gi|291434251|gb|EFF07224.1| competence protein ComEC/Rec2 [Escherichia coli B185]
Length = 754
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 60/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 380 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHSSGPLILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++ +
Sbjct: 438 GLKSLPEGWINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|85859322|ref|YP_461524.1| metallo-beta-lactamase superfamily protein [Syntrophus
aciditrophicus SB]
gi|85722413|gb|ABC77356.1| metallo-beta-lactamase superfamily [Syntrophus aciditrophicus SB]
Length = 831
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/229 (14%), Positives = 79/229 (34%), Gaps = 25/229 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGIS---AIGYFYSIPKM 58
L + ++ DP + + + P F F +F++ I F P+
Sbjct: 326 LLLDRRQDPANSLAAAAVLILMFSPDA-LFDISFQLSFAAVASIIGINPVFSRFMMKPES 384
Query: 59 IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILA 118
+ S W K +I + + +GT ++ F+ + + L AN++
Sbjct: 385 LPESTGKTAWIVKIKRNILLFLITTVSVTLGTM------PIIVFCFNRLSLVVLPANMIL 438
Query: 119 IPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP 176
+PIL + +P ++ I++ S L + AW + + + + ++ P
Sbjct: 439 VPILGLLALPLSMMVIVVSPFSEMLAGLLIHCSAWLIKLSLILIDFLAGLDGTAFYVCTP 498
Query: 177 ETS-----FVTIVVEFLLMVFCK--------TNIRHIGSIMIGITIIIL 212
++ ++ ++ + R G + I + +
Sbjct: 499 SLWQIAAFYMLLISGIQMIDLFRQDDIPGLQRKRRLFGLLFIVMLTFLA 547
Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 30/237 (12%), Positives = 69/237 (29%), Gaps = 25/237 (10%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+L++ ++D I L P PG D+ ++ IS G+ +++
Sbjct: 131 LLTVKGRHD-LKYGDFIRCETCLGKPHNFNNPGGLDYEKRLRFEKISFTGFIAEKSRIVM 189
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA-----------SIFLIKHFHCIPV 109
E + I + I AN L++ F+
Sbjct: 190 LREGQGNFFKGAIERFRNDIRRIIIANAPHPEQTVLQAMIIGCQKEIPPTLMEKFNITGT 249
Query: 110 YGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
++ILAI + +I + ++ + + + L I +
Sbjct: 250 ----SHILAISGFNVGIIALWTLVVIRRLFKISDYLM------LRFNIIKLSLLWAIPPV 299
Query: 170 FCIGRIPETSFVTIVVEFLLMVFCKTNI---RHIGSIMIGITIIILFTFPYSFSPDL 223
+ + + +VF + R + + +++ F D+
Sbjct: 300 VLYALVAGAGMSVLRAAIMALVFMAALLLDRRQDPANSLAAAAVLILMFSPDALFDI 356
>gi|320184255|gb|EFW59068.1| hypothetical protein SGF_03556 [Shigella flexneri CDC 796-83]
Length = 722
Score = 57.9 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 60/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 380 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++ +
Sbjct: 438 GLKSLPEGWINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|331672451|ref|ZP_08373241.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli TA280]
gi|331070357|gb|EGI41722.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli TA280]
Length = 780
Score = 57.5 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 59/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIP---AGLIAILLMILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P A ++A L L L+ + + L ++
Sbjct: 406 FHGISLTSFIANLFAIPLVTFITVPLILAAMVAHLSGPLILEQGLWFLADRSLALLFW-- 463
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++ +
Sbjct: 464 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKP 520
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 521 RPDEWQVYMLDVGQGLAMVIARNGKAI 547
>gi|331641439|ref|ZP_08342574.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli H736]
gi|331038237|gb|EGI10457.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli H736]
Length = 780
Score = 57.5 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 73/199 (36%), Gaps = 26/199 (13%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 357 AAAVAALIFWYQWFPCPEWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTS 413
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+LAIP+++F+ +P L A+++ L L+ + + L ++ S+
Sbjct: 414 FIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW--GLKSLPEG 471
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD----- 222
I + + L+V + N R + ++ + +++ + PD
Sbjct: 472 WINIAECWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPDEWQLY 528
Query: 223 ---------LLISEKGNLV 232
++I+ G +
Sbjct: 529 MLDVGQGLAMVIARNGKAI 547
>gi|56478742|ref|YP_160331.1| DNA internalization-related competence protein ComEC/Rec2
[Aromatoleum aromaticum EbN1]
gi|56314785|emb|CAI09430.1| DNA internalization-related competence protein ComEC/Rec2
[Aromatoleum aromaticum EbN1]
Length = 782
Score = 57.5 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 63/196 (32%), Gaps = 6/196 (3%)
Query: 41 SYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFL 100
+ + + + S + + + + + L
Sbjct: 347 ALFTVLVVDPWAVLSAGFWLSFGAVAAIMYVVGGRAGSMPGWRVAVTTQLAITLATVPAL 406
Query: 101 IKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIA 160
+ F+ + AN AIP++SF++ P L AI+L L + + + + +A
Sbjct: 407 LVLFNAFSLLSPFANAFAIPLVSFLITPLALAAIVLPFPPLLELAHWLTGLMMVALQWLA 466
Query: 161 HR-ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK-TNIRHIGSIMIGITIIILFTFPYS 218
++ I L ++ + T RH+G + + + P
Sbjct: 467 DMPFAMWQQAGPPPLIALAGI----AGVLWLLLPRGTPARHVGVLAMLPMLAWSPPRPAP 522
Query: 219 FSPDLLISEKGNLVAL 234
L + + GN +A+
Sbjct: 523 GEFRLTVLDVGNGMAV 538
>gi|302878890|ref|YP_003847454.1| DNA internalization-related competence protein ComEC/Rec2
[Gallionella capsiferriformans ES-2]
gi|302581679|gb|ADL55690.1| DNA internalization-related competence protein ComEC/Rec2
[Gallionella capsiferriformans ES-2]
Length = 786
Score = 57.5 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 58/136 (42%), Gaps = 6/136 (4%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F + IAN AIP++S VV+P L L +P + LD+ + +
Sbjct: 416 FGQFSLVSPIANAFAIPLISLVVVPLALTGAALP----GEVPLWLAHIALDLTMLPLQGL 471
Query: 164 SVAHNEFCIGRIPE-TSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSP 221
S + I IP S T ++ L ++ + + R +G +++ + P S +
Sbjct: 472 SDWPDAIWIQHIPPHWSIATGMLGVLWILLPQGFSSRWLGGLLLLPMFLNTPAPPKSGTL 531
Query: 222 DLLISEKGNLVALVDK 237
L + + G ++++ +
Sbjct: 532 RLTLFDVGQGLSVLAE 547
>gi|291613863|ref|YP_003524020.1| DNA internalization-related competence protein ComEC/Rec2
[Sideroxydans lithotrophicus ES-1]
gi|291583975|gb|ADE11633.1| DNA internalization-related competence protein ComEC/Rec2
[Sideroxydans lithotrophicus ES-1]
Length = 786
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 64/150 (42%), Gaps = 7/150 (4%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F + + +AN AIP++SF+V+P L+ L V + + +++ H +
Sbjct: 402 FQQLSLVSPLANAFAIPLVSFIVVPLTLLGT-LPPF---EWMLYVAHEAMTLCMYLLHLL 457
Query: 164 -SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSP 221
+ + + P + + + L ++ + +R +GS+++ ++ P +
Sbjct: 458 DKLPYVVWSQHAPPAWTILAGIGGALWLLSPRGFPMRWLGSLLLLPMFLVAPERPAAGGA 517
Query: 222 DLLISEKGNLVAL-VDKNTLISNYSNPPSF 250
L++ + G +++ V + Y P F
Sbjct: 518 RLVVFDVGQGLSVAVQTHAHALLYDTGPDF 547
>gi|331656984|ref|ZP_08357946.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli TA206]
gi|331055232|gb|EGI27241.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli TA206]
Length = 754
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 66/185 (35%), Gaps = 28/185 (15%)
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W + + S + ++ + I FH I + IAN+ AIP+++F+
Sbjct: 347 PEWQLPPVLRVVVSLI-----HLQLGITLLLMPVQIVIFHGISLTSFIANLFAIPLVTFI 401
Query: 126 VIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L A+++ L+ + + L ++ S+ I +
Sbjct: 402 TVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW--GLKSLPEGWINIAERWQW---L 456
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD--------------LLISE 227
+ L+V + N R + ++ + + +++ PD ++I+
Sbjct: 457 TFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKPRPDEWQVYMLDVGQGLAMVIAR 516
Query: 228 KGNLV 232
G +
Sbjct: 517 NGKAI 521
>gi|81246063|gb|ABB66771.1| conserved hypothetical protein [Shigella boydii Sb227]
Length = 748
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 74/199 (37%), Gaps = 26/199 (13%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 357 AAAVAALIFWYQWFPCPEWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTS 413
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+LAIP+++F+ +P L A+++ L L+ + + L ++ S+
Sbjct: 414 FIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW--GLKSLQEG 471
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD----- 222
I + + L+V + N R + ++ + + +++ + PD
Sbjct: 472 WINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPDEWQVY 528
Query: 223 ---------LLISEKGNLV 232
++I+ G +
Sbjct: 529 MLDVGQGLAMVIARNGKAI 547
>gi|312969021|ref|ZP_07783228.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 2362-75]
gi|312286423|gb|EFR14336.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 2362-75]
Length = 754
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L+ + + L ++
Sbjct: 380 FHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQGVWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++
Sbjct: 438 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|261856026|ref|YP_003263309.1| DNA internalization-related competence protein ComEC/Rec2
[Halothiobacillus neapolitanus c2]
gi|261836495|gb|ACX96262.1| DNA internalization-related competence protein ComEC/Rec2
[Halothiobacillus neapolitanus c2]
Length = 840
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 68/188 (36%), Gaps = 4/188 (2%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI--AILLMILSLDNIP 145
+ + + + F + L ANILA+P+++FV+ P L+ A + M+ S+ +
Sbjct: 443 LQIIITLALLPIVWWLFDRVAWSSLPANILAVPVITFVITPLSLLVMAFVSMLPSVAAVL 502
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIM 204
+ + + + + I + + + M+ K R++G ++
Sbjct: 503 MWPINVLTHGLFGFLEWLRLTLPDSHIAAPAGWTLLLASLGVAWMLMPKFWPARYLGLVL 562
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL-ISNYSNPPSFIFSQWKSALITPF 263
+ D+ + G +A+V Y P+F S + P
Sbjct: 563 CLPAVFYRPAPIPDGEADIWFLDVGQGLAVVIHTARHAMLYDAGPAFGGSDAGERTVVPA 622
Query: 264 HEAPHVQK 271
A HV +
Sbjct: 623 LRALHVSE 630
>gi|71908445|ref|YP_286032.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Dechloromonas aromatica RCB]
gi|71848066|gb|AAZ47562.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Dechloromonas aromatica RCB]
Length = 772
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 60/166 (36%), Gaps = 12/166 (7%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
F ++ ++Y + + ++ + + A + + F +
Sbjct: 362 FGAVGALLYVGSAQVGEGQGWRAHVRSWGIAQWVATLASLPILLLV------FQQFSLVS 415
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
+AN LAIP++SFVV P L+ ++ + + VMAW +D + A +
Sbjct: 416 PLANALAIPVISFVVTPLALLGAVVPWWPIFGLAHQVMAWLMDFLEWCATW-----PVWQ 470
Query: 172 IGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFP 216
+ P V+ + + R +G+ ++ + P
Sbjct: 471 VPAPPLWLAVSAGAGVAFCLLPRGLPGRWLGAFLVVPVLFWATEKP 516
>gi|12514082|gb|AAG55398.1|AE005281_1 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|13360455|dbj|BAB34419.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|209748608|gb|ACI72611.1| hypothetical protein ECs0996 [Escherichia coli]
gi|209748610|gb|ACI72612.1| hypothetical protein ECs0996 [Escherichia coli]
gi|209748612|gb|ACI72613.1| hypothetical protein ECs0996 [Escherichia coli]
Length = 780
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 74/199 (37%), Gaps = 26/199 (13%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 357 AAAVAALIFWYQWFPCPEWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTS 413
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+LAIP+++F+ +P L A+++ L LD + + L ++ + +
Sbjct: 414 FIANLLAIPLVTFITVPLILAAMVVHLSGPLILDQGLWFLADRSLALL-----FLGLKSL 468
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD----- 222
I E + L+V + N R + ++ + + +++ + PD
Sbjct: 469 PEGWINIAERWQWLSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPDEWQVY 528
Query: 223 ---------LLISEKGNLV 232
++I+ G +
Sbjct: 529 MLDVGQGLAMVIARNGKAI 547
>gi|332282182|ref|ZP_08394595.1| conserved hypothetical protein [Shigella sp. D9]
gi|332104534|gb|EGJ07880.1| conserved hypothetical protein [Shigella sp. D9]
Length = 780
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 74/199 (37%), Gaps = 26/199 (13%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 357 AAAVAALIFWYQWFPCPEWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTS 413
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+LAIP+++F+ +P L A+++ L L+ + + L ++ + +
Sbjct: 414 FIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALL-----FLGLKSL 468
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD----- 222
I E + L+V + N R + ++ + + +++ + PD
Sbjct: 469 PEGWINIAERWQWLSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPDEWQVY 528
Query: 223 ---------LLISEKGNLV 232
++I+ G +
Sbjct: 529 MLDVGQGLAMVIARNGKAI 547
>gi|215486038|ref|YP_002328469.1| hypothetical protein E2348C_0906 [Escherichia coli O127:H6 str.
E2348/69]
gi|215264110|emb|CAS08454.1| conserved inner membrane protein [Escherichia coli O127:H6 str.
E2348/69]
Length = 754
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L+ + + L ++
Sbjct: 380 FHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQGVWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++
Sbjct: 438 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|161986560|ref|YP_309889.2| hypothetical protein SSON_0915 [Shigella sonnei Ss046]
Length = 754
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 60/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 380 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++ +
Sbjct: 438 GLKSLPEGWINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|218899493|ref|YP_002447904.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus G9842]
gi|218542466|gb|ACK94860.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus G9842]
Length = 773
Score = 57.5 bits (137), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 65/167 (38%), Gaps = 26/167 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F + + S P ++ SS I+ S I + +
Sbjct: 326 GFQFSFVGSFALL------LSAPFLLGSSNGV----------IRNSIYISIISQL----- 364
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAW 151
++ L+ HF Y + N+L +P LS +V+P +I +L M + L V++
Sbjct: 365 -VSTPILLYHFGYFSPYSIFLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGFADVLSI 423
Query: 152 GLDII-IHIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTN 196
GL + + +++ S+ N+ G+ + +++ +
Sbjct: 424 GLSMSNVLLSYCESLPFNQLIFGKTSFNLVAVYCTSIVSILIVWERR 470
>gi|26107339|gb|AAN79522.1|AE016758_126 Hypothetical protein ycaI [Escherichia coli CFT073]
Length = 764
Score = 57.1 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L+ + + L ++
Sbjct: 390 FHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW-- 447
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++
Sbjct: 448 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKP 504
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 505 RPDEWQVYMLDVGQGLAMVIARNGKAI 531
>gi|209918163|ref|YP_002292247.1| hypothetical protein ECSE_0972 [Escherichia coli SE11]
gi|209911422|dbj|BAG76496.1| conserved hypothetical protein [Escherichia coli SE11]
gi|324019078|gb|EGB88297.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 117-3]
Length = 754
Score = 57.1 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 59/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 380 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + +++ +
Sbjct: 438 GLKSLPEGWINIAECWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|332992968|gb|AEF03023.1| DNA internalization-related competence protein ComEC/Rec2
[Alteromonas sp. SN2]
Length = 851
Score = 57.1 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 57/152 (37%), Gaps = 6/152 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNI 144
I S + + F G+IAN+ +P+++ +V+P L+A++ + SLD
Sbjct: 424 IQLGVSVVMAPITLLWFGTASTIGIIANLFVLPVIT-LVLPVALLAVMAGYYIPTSLDFA 482
Query: 145 PFGVM--AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
+ ++ L ++ + S + ++ LL + + +
Sbjct: 483 IWVLLKIDKVLGWLLTCLSDAASWPISAIHFYPTTGSILCLLFAMLLAILPRWRYKWACV 542
Query: 203 IMIGITIIILFTFPYSFSPDLLISEKGNLVAL 234
++ + + + F + + + G A+
Sbjct: 543 SLLILPVTLTFIHSSPTRWFVNVFDAGQGTAI 574
>gi|237707099|ref|ZP_04537580.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|91071588|gb|ABE06469.1| hypothetical protein YcaI [Escherichia coli UTI89]
gi|226898309|gb|EEH84568.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
Length = 764
Score = 57.1 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L+ + + L ++
Sbjct: 390 FHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW-- 447
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++
Sbjct: 448 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKP 504
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 505 RPDEWQVYMLDVGQGLAMVIARNGKAI 531
>gi|95931407|ref|ZP_01314116.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfuromonas acetoxidans DSM 684]
gi|95132544|gb|EAT14234.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfuromonas acetoxidans DSM 684]
Length = 783
Score = 57.1 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 42/226 (18%), Positives = 79/226 (34%), Gaps = 23/226 (10%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+T ++ + + IA L P LF +F + G++A +I
Sbjct: 317 LTVRHRHVRPDDLLYSIALLILLVKPL--ALFGASFQLSFAGVAA---------LILVLP 365
Query: 64 SHNTWTWKKISS-IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ W + + L + A + T + HFH + L+ N+ A+P++
Sbjct: 366 TWRDWQQHRWQRWLALPPLVTLTATVATL------PIALWHFHVLAPAALVNNLYAVPLV 419
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWG--LDIIIHIAHRISV--AHNEFCIGRIPET 178
V++P L+A L+ L P G L+ I+ +A IS + +P
Sbjct: 420 GLVILPVTLLATALLATGLPGAPLLFHTAGDLLNGILSVATTISQGFLAAQRLYLTVPHH 479
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLL 224
V + L+ + R + + + S P L
Sbjct: 480 -LVLAGISITLLALLAKHRRLTVASLTTTLLGGAILGVTSMPPSTL 524
Score = 36.7 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 39/271 (14%), Positives = 79/271 (29%), Gaps = 62/271 (22%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM--------I 59
+ P T+ +L P PG FD+ GISA GY S ++
Sbjct: 129 HCPLLPGDTLSWTGKLRRPRRFGTPGEFDYPRYLANLGISASGYITSSKQIEVKHPTTIP 188
Query: 60 YSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAI 119
+ W + +I + + + S + +GL +++ AI
Sbjct: 189 SPLVAVERWRSQLGQAIATKINHPQTPFLISLVLGEKSRLTPAQRQDLAQFGL-SHLFAI 247
Query: 120 PILSFVVIPAGLIAILLMIL------SLDNIPFG---------------------VMAWG 152
L ++ A ++ +++ L +L P + W
Sbjct: 248 SGLHLGLL-ASMLYLVVQKLYRRSTRALMWCPLQQAVAVLILPPLLFYLLLSGGALPTWR 306
Query: 153 LDIIIHIAHRISVAH--------------------NEFCIGRIPETSFVTIVVEFLLMVF 192
++I +A ++V H G + SF + L++
Sbjct: 307 AGLLIALAAWLTVRHRHVRPDDLLYSIALLILLVKPLALFGASFQLSFAGVAALILVLPT 366
Query: 193 CK-----TNIRHIGSIMIGITIIILFTFPYS 218
+ R + + + T P +
Sbjct: 367 WRDWQQHRWQRWLALPPLVTLTATVATLPIA 397
>gi|323938019|gb|EGB34281.1| competence protein [Escherichia coli E1520]
Length = 754
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 73/199 (36%), Gaps = 26/199 (13%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 331 AAAVAALIFWYQWFPCPEWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTS 387
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+LAIP+++F+ +P L A+++ L L+ + + L ++ S+
Sbjct: 388 FIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW--GLKSLPEG 445
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD----- 222
I + + L+V + N R + ++ + +++ + PD
Sbjct: 446 WINIAECWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPDEWQLY 502
Query: 223 ---------LLISEKGNLV 232
++I+ G +
Sbjct: 503 MLDVGQGLAMVIARNGKAI 521
>gi|300929608|ref|ZP_07145070.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 187-1]
gi|300462445|gb|EFK25938.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 187-1]
Length = 754
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 73/199 (36%), Gaps = 26/199 (13%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 331 AAAVAALIFWYQWFPCPEWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTS 387
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+LAIP+++F+ +P L A+++ L L+ + + L ++ S+
Sbjct: 388 FIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW--GLKSLPEG 445
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD----- 222
I + + L+V + N R + ++ + +++ + PD
Sbjct: 446 WINIAECWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPDEWQLY 502
Query: 223 ---------LLISEKGNLV 232
++I+ G +
Sbjct: 503 MLDVGQGLAMVIARNGKAI 521
>gi|300902928|ref|ZP_07120873.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 84-1]
gi|301302478|ref|ZP_07208609.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 124-1]
gi|300405070|gb|EFJ88608.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 84-1]
gi|300842317|gb|EFK70077.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 124-1]
gi|315257954|gb|EFU37922.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 85-1]
Length = 754
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 59/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 380 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + +++ +
Sbjct: 438 GLKSLPEGWINIAECWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQLYMLDVGQGLAMVIARNGKAI 521
>gi|310779220|ref|YP_003967553.1| ComEC/Rec2-related protein [Ilyobacter polytropus DSM 2926]
gi|309748543|gb|ADO83205.1| ComEC/Rec2-related protein [Ilyobacter polytropus DSM 2926]
Length = 553
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 79/233 (33%), Gaps = 29/233 (12%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR---ANIGTYG 92
+ +F + + AI + Y K SS++ F+ ++ A T
Sbjct: 284 ELSFQMSFMAVVAIIFIY------------PKVEKKLNSSVRGGFIKKVLLFAAMSLTIQ 331
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
IFL+ F IP+ + N++AIP+ + + A++L ++ L I +
Sbjct: 332 IFLTPIFLVY-FRTIPILSFLVNLVAIPL-GVLFVQNAFGALVLSVVGLGGILMPTVNLS 389
Query: 153 LDIIIHIAHRISVAHN--EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITII 210
I++ S G + + M F + + + I +
Sbjct: 390 YHILLKFIEITSNIPALSVNYYGIKKSGMIILLYSVIFGMAFLRGRWKGLSVIPL----F 445
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS----FIFSQWKSAL 259
IL P++L + +V +K ++ + F+ A+
Sbjct: 446 ILLFIDGPDPPEIL--DYKGIVYYREKPGILVSGKRISDRDIIFLRDNGVKAI 496
>gi|331682420|ref|ZP_08383039.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli H299]
gi|331080051|gb|EGI51230.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli H299]
Length = 754
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 71/199 (35%), Gaps = 26/199 (13%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 331 AAAVAALIFWYQWFPCPKWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTS 387
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+ AIP+++F+ +P L A+++ L+ + + L ++ S+
Sbjct: 388 FIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW--GLKSLPEG 445
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD----- 222
I + + L+V + N R + ++ + + +++ PD
Sbjct: 446 WINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKPRPDEWQVY 502
Query: 223 ---------LLISEKGNLV 232
++I+ G +
Sbjct: 503 MLDVGQGLAMVIARNGKAI 521
>gi|315619107|gb|EFU99687.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 3431]
Length = 624
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 59/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 250 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW-- 307
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + +++ +
Sbjct: 308 GLKSLPEGWINIAECWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKP 364
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 365 RPDEWQLYMLDVGQGLAMVIARNGKAI 391
>gi|319651625|ref|ZP_08005752.1| DNA internalization-like competence protein ComEC/Rec2 [Bacillus
sp. 2_A_57_CT2]
gi|317396692|gb|EFV77403.1| DNA internalization-like competence protein ComEC/Rec2 [Bacillus
sp. 2_A_57_CT2]
Length = 776
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/234 (17%), Positives = 86/234 (36%), Gaps = 25/234 (10%)
Query: 46 ISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFL-------NEIRANIGTYGSASASI 98
I IGY + P +IY++ ++ + + + +A
Sbjct: 314 IVFIGYLFISPYIIYNAGFQLSFAVALSLILSAPIILKRFSESYAAILAVSFVCQMAAIP 373
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDII 156
L+ HF+ + + +IAN++ +P+ SF+++P LI + +L + V + +
Sbjct: 374 ILLWHFYEVSIISIIANLIFVPLYSFIILPVVLILFIFDLLTEGKAVLLLNVFERLISFL 433
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM-VFCKTNIR--------HIGSIMIGI 207
IA +S N + + S + ++V LL+ F R G + I
Sbjct: 434 NWIAELLSAIPNSTLV--LGRPSLIMLIVYLLLIPAFFAGWERSKNKKALIRSGVLPILA 491
Query: 208 TIIILFTFPYSFSPDLLISEKGN----LVALVDKNTLISNYSNPP-SFIFSQWK 256
+I + ++ + ++ + G L+ L + F W+
Sbjct: 492 ILIQYLSNVFTPAGEITFIDVGQGDSILIKLPYGRGNYLIDAGGTLMFDTEDWR 545
>gi|89107763|ref|AP_001543.1| conserved inner membrane protein [Escherichia coli str. K-12
substr. W3110]
gi|90111187|ref|NP_415433.4| inner membrane protein, ComEC family of competence proteins
[Escherichia coli str. K-12 substr. MG1655]
gi|170020685|ref|YP_001725639.1| hypothetical protein EcolC_2683 [Escherichia coli ATCC 8739]
gi|170080571|ref|YP_001729891.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
gi|188492232|ref|ZP_02999502.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 53638]
gi|194438704|ref|ZP_03070791.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 101-1]
gi|238900171|ref|YP_002925967.1| conserved inner membrane protein [Escherichia coli BW2952]
gi|253774058|ref|YP_003036889.1| hypothetical protein ECBD_2682 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161027|ref|YP_003044135.1| hypothetical protein ECB_00917 [Escherichia coli B str. REL606]
gi|256023386|ref|ZP_05437251.1| hypothetical protein E4_08429 [Escherichia sp. 4_1_40B]
gi|300949725|ref|ZP_07163703.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 116-1]
gi|300955439|ref|ZP_07167813.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 175-1]
gi|301022407|ref|ZP_07186290.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 196-1]
gi|301643433|ref|ZP_07243481.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 146-1]
gi|307137542|ref|ZP_07496898.1| hypothetical protein EcolH7_05346 [Escherichia coli H736]
gi|312971041|ref|ZP_07785220.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 1827-70]
gi|13878949|sp|P37443|YCAI_ECOLI RecName: Full=Uncharacterized protein ycaI
gi|85674789|dbj|BAA35657.2| conserved inner membrane protein [Escherichia coli str. K12 substr.
W3110]
gi|87081801|gb|AAC73999.2| inner membrane protein, ComEC family of competence proteins
[Escherichia coli str. K-12 substr. MG1655]
gi|169755613|gb|ACA78312.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli ATCC 8739]
gi|169888406|gb|ACB02113.1| conserved inner membrane protein [Escherichia coli str. K-12
substr. DH10B]
gi|188487431|gb|EDU62534.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 53638]
gi|194422336|gb|EDX38336.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 101-1]
gi|238860215|gb|ACR62213.1| conserved inner membrane protein [Escherichia coli BW2952]
gi|242376728|emb|CAQ31441.1| conserved inner membrane protein [Escherichia coli BL21(DE3)]
gi|253325102|gb|ACT29704.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253972928|gb|ACT38599.1| conserved inner membrane protein [Escherichia coli B str. REL606]
gi|253977142|gb|ACT42812.1| conserved inner membrane protein [Escherichia coli BL21(DE3)]
gi|260449941|gb|ACX40363.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli DH1]
gi|299881248|gb|EFI89459.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 196-1]
gi|300317662|gb|EFJ67446.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 175-1]
gi|300450873|gb|EFK14493.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 116-1]
gi|301078147|gb|EFK92953.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 146-1]
gi|309701189|emb|CBJ00489.1| putative competence-related protein [Escherichia coli ETEC H10407]
gi|310336802|gb|EFQ01969.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli 1827-70]
gi|315135561|dbj|BAJ42720.1| hypothetical protein ECDH1ME8569_0864 [Escherichia coli DH1]
gi|323962905|gb|EGB58479.1| competence protein [Escherichia coli H489]
gi|323973212|gb|EGB68404.1| competence protein [Escherichia coli TA007]
Length = 754
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 59/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 380 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + +++ +
Sbjct: 438 GLKSLPEGWINIAECWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQLYMLDVGQGLAMVIARNGKAI 521
>gi|309795102|ref|ZP_07689522.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 145-7]
gi|308121406|gb|EFO58668.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 145-7]
Length = 563
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 60/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 189 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW-- 246
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++ +
Sbjct: 247 GLKSLPEGWINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKP 303
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 304 RPDEWQVYMLDVGQGLAMVIARNGKAI 330
>gi|300937742|ref|ZP_07152543.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 21-1]
gi|300457249|gb|EFK20742.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 21-1]
Length = 427
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 72/199 (36%), Gaps = 26/199 (13%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 4 AAAVAALIFWYQWFPGPEWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTS 60
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+ AIP+++F+ +P L A+++ L L+ + + L ++ S+
Sbjct: 61 FIANLFAIPLVTFITVPLILAAMVVHLSGPLILEEGLWFLADRSLALLFW--GLKSLPEG 118
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD----- 222
I + + L+V + N R + ++ + +++ + PD
Sbjct: 119 WINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPDEWQVY 175
Query: 223 ---------LLISEKGNLV 232
++I+ G +
Sbjct: 176 MLDVGQGLAMVIARNGKAI 194
>gi|320664293|gb|EFX31444.1| ComEC family competence protein [Escherichia coli O157:H7 str.
LSU-61]
Length = 754
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 60/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L LD + + L ++
Sbjct: 380 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILDQGLWFLADRSLALL---- 435
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
+ + I E + L+V + N R + ++ + + +++ +
Sbjct: 436 -FLGLKSLPEGWINIAERWQWLSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|227111955|ref|ZP_03825611.1| hypothetical protein PcarbP_03268 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 757
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/207 (14%), Positives = 78/207 (37%), Gaps = 15/207 (7%)
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
++ + ++ T + + FH + L AN+ A+P++SFV P L+A+
Sbjct: 359 RRRWFWLRWIHLQTGITLLLMPLQLHIFHGFSITSLPANLWAVPLVSFVTTPLILLALST 418
Query: 137 MILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK- 194
M L+ L + + + L ++ + + + + + + V + +V +
Sbjct: 419 MALAPLSEMLWWLADISLRVV-----FAPLTYLQTGWVYLDASLLLVSVAGWGAVVIWRF 473
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSFI 251
+ R + + +++L + PD ++ L ++++ Y
Sbjct: 474 SWWRVYPMSVSALIVVLLVFRIKTDEPDWRVDMLDVGHGLAIVIEQRGKAVLYDTGNR-- 531
Query: 252 FSQWKSALITPFHEAPHVQKEDLQEKN 278
W+ + P+++ + +N
Sbjct: 532 ---WEGGDMATREILPYLRWRGVDVEN 555
>gi|330891488|gb|EGH24149.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. mori str. 301020]
Length = 399
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHIAHRISV 165
I + G AN+LA+ +S +V+P L+ LL+ + + + L+ + ++
Sbjct: 37 ISLSGPFANLLAVLWVSLIVLPPALLGTLLLPVPIVGEGLLWLAGGALEWLFMFLGSVAA 96
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
+ +P +++ ++ +++ K +R +G ++ + + + ++L
Sbjct: 97 VLPAWLPSAMPGWAWLLSLLGAFILLLPKGVPMRPLGWPLLLLCVFPPLDSVPAGQVEVL 156
Query: 225 ISEKGNLVALV 235
+ G +A++
Sbjct: 157 QLDVGQGLAIL 167
>gi|323942829|gb|EGB38994.1| competence protein [Escherichia coli E482]
Length = 738
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 59/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 364 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW-- 421
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + +++ +
Sbjct: 422 GLKSLPEGWINIAECWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKP 478
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 479 RPDEWQLYMLDVGQGLAMVIARNGKAI 505
>gi|161486261|ref|NP_752979.2| hypothetical protein c1052 [Escherichia coli CFT073]
gi|227884122|ref|ZP_04001927.1| possible competence protein EC [Escherichia coli 83972]
gi|227838874|gb|EEJ49340.1| possible competence protein EC [Escherichia coli 83972]
gi|307552752|gb|ADN45527.1| Rec2-related protein [Escherichia coli ABU 83972]
Length = 754
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L+ + + L ++
Sbjct: 380 FHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++
Sbjct: 438 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|320653679|gb|EFX21753.1| ComEC family competence protein [Escherichia coli O55:H7 str.
3256-97 TW 07815]
Length = 754
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 74/199 (37%), Gaps = 26/199 (13%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 331 AAAVAALIFWYQWFPCPEWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTS 387
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+LAIP+++F+ +P L A+++ L LD + + L ++ + +
Sbjct: 388 FIANLLAIPLVTFITVPLILAAMVVHLSGPLILDQGLWFLADRSLALL-----FLGLKSL 442
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD----- 222
I E + L+V + N R + ++ + + +++ + PD
Sbjct: 443 PEGWINIAERWQWLSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPDEWQVY 502
Query: 223 ---------LLISEKGNLV 232
++I+ G +
Sbjct: 503 MLDVGQGLAMVIARNGKAI 521
>gi|330830193|ref|YP_004393145.1| DNA internalization-related competence protein ComEC/Rec2
[Aeromonas veronii B565]
gi|328805329|gb|AEB50528.1| DNA internalization-related competence protein ComEC/Rec2
[Aeromonas veronii B565]
Length = 733
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 53/139 (38%), Gaps = 5/139 (3%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAH 161
F I ++ N+LA+P+ +IP LI +LL L SL F + GL ++ I
Sbjct: 360 FEGIAPLAMVINLLAVPLFCIAIIPLALIGVLLAPLSTSLAYGLFWLADLGLGWMLTILS 419
Query: 162 RISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+S + T+++ + R + G ++L +P
Sbjct: 420 WLSDQLQLWWPLPGWWLPLCTLLLLLWFAAQWR-PARWLWLP--GALALVLACWPAPARW 476
Query: 222 DLLISEKGNLVALVDKNTL 240
L + + G +A++
Sbjct: 477 QLRVLDVGQGLAVLISKGE 495
>gi|320196593|gb|EFW71216.1| hypothetical protein EcoM_01134 [Escherichia coli WV_060327]
Length = 754
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L+ + + L ++
Sbjct: 380 FHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++
Sbjct: 438 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|228969943|ref|ZP_04130663.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228789765|gb|EEM37627.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar sotto str. T04001]
Length = 544
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 65/167 (38%), Gaps = 26/167 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F + + S P ++ SS I+ S I + +
Sbjct: 326 GFQFSFVGSFALL------LSAPFLLGSSNGV----------IRNSIYISIISQL----- 364
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAW 151
++ L+ HF Y + N+L +P LS +V+P +I +L M + L V++
Sbjct: 365 -VSTPILLYHFGYFSPYSIFLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGFADVLSI 423
Query: 152 GLDII-IHIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTN 196
GL + + +++ S+ N+ G+ + +++ +
Sbjct: 424 GLSMSNVLLSYCESLPFNQLIFGKTSFNLVAVYCASIVSILIVWERR 470
>gi|222032644|emb|CAP75383.1| Uncharacterized protein ycaI [Escherichia coli LF82]
gi|312945433|gb|ADR26260.1| hypothetical protein NRG857_04160 [Escherichia coli O83:H1 str. NRG
857C]
Length = 754
Score = 57.1 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L+ + + L ++
Sbjct: 380 FHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++
Sbjct: 438 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|161524334|ref|YP_001579346.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia multivorans ATCC 17616]
gi|160341763|gb|ABX14849.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia multivorans ATCC 17616]
Length = 819
Score = 56.7 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 81/215 (37%), Gaps = 5/215 (2%)
Query: 30 AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR--AN 87
F +F + + ++ + ++ + ++S +++ L+ + A
Sbjct: 362 VLSAGFWLSFGAVAAILLSVAGWRAVREHEADTDSEPPGAMQRLHGWAMRALHRLADAAR 421
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
+ + + F I + G + N AIP +SFVV P ++A L++ LD
Sbjct: 422 VQYAVTIGLAPLTAAWFAQISLSGPLGNAFAIPWVSFVVTP-TVLAGLVLPAPLDAAMLR 480
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV-VEFLLMVFCKTN-IRHIGSIMI 205
+ L+ ++ + R++ R+P+ + + V + M+ + +R +
Sbjct: 481 LAHASLEPMMTLLARLAAWPAGVMWLRMPDAPVLVLACVGVVWMLMPRGWPLRWAAPLTW 540
Query: 206 GITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ P + L + + G +++ +
Sbjct: 541 LPLVAPAPDAPPVGAFRLTVLDVGQGTSVLVETAR 575
>gi|293409290|ref|ZP_06652866.1| hypothetical protein ECEG_00223 [Escherichia coli B354]
gi|291469758|gb|EFF12242.1| hypothetical protein ECEG_00223 [Escherichia coli B354]
Length = 754
Score = 56.7 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 73/199 (36%), Gaps = 26/199 (13%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 331 AAAVAALIFWYQWFPCPEWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTS 387
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+ AIP+++F+ +P L A+++ L L+ + + L ++ S+
Sbjct: 388 FIANLFAIPLVTFITVPLILAAMVVHLSGPLILEEGLWFLADRSLALLFW--GLKSLPEG 445
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD----- 222
I + + L+V + N R + ++ + + +++ + PD
Sbjct: 446 WINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPDEWQVY 502
Query: 223 ---------LLISEKGNLV 232
++I+ G +
Sbjct: 503 MLDVGQGLAMVIARNGKAI 521
>gi|291281914|ref|YP_003498732.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O55:H7 str. CB9615]
gi|290761787|gb|ADD55748.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O55:H7 str. CB9615]
gi|320659824|gb|EFX27380.1| ComEC family competence protein [Escherichia coli O55:H7 str. USDA
5905]
Length = 754
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 74/199 (37%), Gaps = 26/199 (13%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 331 AAAVAALIFWYQWFPCPEWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTS 387
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+LAIP+++F+ +P L A+++ L LD + + L ++ + +
Sbjct: 388 FIANLLAIPLVTFITVPLILAAMVVHLSGPLILDQGLWFLADRSLALL-----FLGLKSL 442
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD----- 222
I E + L+V + N R + ++ + + +++ + PD
Sbjct: 443 PEGWINIAERWQWLSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPDEWQVY 502
Query: 223 ---------LLISEKGNLV 232
++I+ G +
Sbjct: 503 MLDVGQGLAMVIARNGKAI 521
>gi|110641110|ref|YP_668840.1| hypothetical protein ECP_0924 [Escherichia coli 536]
gi|218688753|ref|YP_002396965.1| hypothetical protein ECED1_0940 [Escherichia coli ED1a]
gi|306812634|ref|ZP_07446827.1| hypothetical protein ECNC101_11997 [Escherichia coli NC101]
gi|110342702|gb|ABG68939.1| hypothetical membrane protein YcaI [Escherichia coli 536]
gi|218426317|emb|CAR07142.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli ED1a]
gi|305853397|gb|EFM53836.1| hypothetical protein ECNC101_11997 [Escherichia coli NC101]
Length = 754
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L+ + + L ++
Sbjct: 380 FHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++
Sbjct: 438 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|162138458|ref|YP_540000.2| hypothetical protein UTI89_C0984 [Escherichia coli UTI89]
gi|218557818|ref|YP_002390731.1| hypothetical protein ECS88_0941 [Escherichia coli S88]
gi|218364587|emb|CAR02273.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli S88]
gi|307627660|gb|ADN71964.1| hypothetical protein UM146_12985 [Escherichia coli UM146]
gi|323958218|gb|EGB53927.1| competence protein [Escherichia coli H263]
Length = 754
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L+ + + L ++
Sbjct: 380 FHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++
Sbjct: 438 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|38703904|ref|NP_309023.2| hypothetical protein ECs0996 [Escherichia coli O157:H7 str. Sakai]
gi|161367627|ref|NP_286788.2| hypothetical protein Z1259 [Escherichia coli O157:H7 EDL933]
gi|168751176|ref|ZP_02776198.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4113]
gi|168757005|ref|ZP_02782012.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4401]
gi|168762951|ref|ZP_02787958.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4501]
gi|168769908|ref|ZP_02794915.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4486]
gi|168776235|ref|ZP_02801242.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4196]
gi|168784110|ref|ZP_02809117.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4076]
gi|168787342|ref|ZP_02812349.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC869]
gi|168801403|ref|ZP_02826410.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC508]
gi|195940070|ref|ZP_03085452.1| hypothetical protein EscherichcoliO157_27375 [Escherichia coli
O157:H7 str. EC4024]
gi|208815674|ref|ZP_03256853.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4045]
gi|208822704|ref|ZP_03263023.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4042]
gi|209400423|ref|YP_002269585.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4115]
gi|217326549|ref|ZP_03442633.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. TW14588]
gi|254792112|ref|YP_003076949.1| hypothetical protein ECSP_1017 [Escherichia coli O157:H7 str.
TW14359]
gi|261227416|ref|ZP_05941697.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261256161|ref|ZP_05948694.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
FRIK966]
gi|187768344|gb|EDU32188.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4196]
gi|188014723|gb|EDU52845.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4113]
gi|188998647|gb|EDU67633.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4076]
gi|189355930|gb|EDU74349.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4401]
gi|189361154|gb|EDU79573.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4486]
gi|189366795|gb|EDU85211.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4501]
gi|189372664|gb|EDU91080.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC869]
gi|189376452|gb|EDU94868.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC508]
gi|208732322|gb|EDZ81010.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4045]
gi|208738189|gb|EDZ85872.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4042]
gi|209161823|gb|ACI39256.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. EC4115]
gi|217322770|gb|EEC31194.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. TW14588]
gi|254591512|gb|ACT70873.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
TW14359]
gi|320192601|gb|EFW67242.1| hypothetical protein ECoD_00528 [Escherichia coli O157:H7 str.
EC1212]
gi|320637781|gb|EFX07573.1| ComEC family competence protein [Escherichia coli O157:H7 str.
G5101]
gi|326338192|gb|EGD62021.1| hypothetical protein ECF_05143 [Escherichia coli O157:H7 str. 1125]
gi|326346169|gb|EGD69907.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli O157:H7 str. 1044]
Length = 754
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 60/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L LD + + L ++
Sbjct: 380 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILDQGLWFLADRSLALL---- 435
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
+ + I E + L+V + N R + ++ + + +++ +
Sbjct: 436 -FLGLKSLPEGWINIAERWQWLSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|161984911|ref|YP_408599.2| hypothetical protein SBO_2201 [Shigella boydii Sb227]
Length = 722
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 60/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 380 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
+ + I E + L+V + N R + ++ + + +++ +
Sbjct: 438 ---GLKSLQEGWINIAERWQWLSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|301023016|ref|ZP_07186827.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 69-1]
gi|300397277|gb|EFJ80815.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 69-1]
Length = 754
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 59/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 380 FHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++ +
Sbjct: 438 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|332093470|gb|EGI98528.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
boydii 3594-74]
Length = 722
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 60/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 380 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++ +
Sbjct: 438 GLKSLQEGWINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|331646178|ref|ZP_08347281.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli M605]
gi|331044930|gb|EGI17057.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli M605]
Length = 754
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L+ + + L ++
Sbjct: 380 FHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++
Sbjct: 438 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|281178044|dbj|BAI54374.1| conserved hypothetical protein [Escherichia coli SE15]
Length = 754
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L+ + + L ++
Sbjct: 380 FHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++
Sbjct: 438 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|256020959|ref|ZP_05434824.1| hypothetical protein ShiD9_18722 [Shigella sp. D9]
Length = 754
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 60/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 380 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALL---- 435
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
+ + I E + L+V + N R + ++ + + +++ +
Sbjct: 436 -FLGLKSLPEGWINIAERWQWLSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|218670731|ref|ZP_03520402.1| hypothetical protein RetlG_03303 [Rhizobium etli GR56]
Length = 236
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 4 ITKKYD-PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGI 46
I + D PF I G ARL+PP+GPA PGL DF+F +Y+ GI
Sbjct: 193 IARGADAPFEIGDVITGRARLTPPAGPALPGLNDFSFGAYFDGI 236
>gi|189350910|ref|YP_001946538.1| competence protein [Burkholderia multivorans ATCC 17616]
gi|189334932|dbj|BAG44002.1| competence protein [Burkholderia multivorans ATCC 17616]
Length = 824
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 81/215 (37%), Gaps = 5/215 (2%)
Query: 30 AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR--AN 87
F +F + + ++ + ++ + ++S +++ L+ + A
Sbjct: 367 VLSAGFWLSFGAVAAILLSVAGWRAVREHEADTDSEPPGAMQRLHGWAMRALHRLADAAR 426
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
+ + + F I + G + N AIP +SFVV P ++A L++ LD
Sbjct: 427 VQYAVTIGLAPLTAAWFAQISLSGPLGNAFAIPWVSFVVTP-TVLAGLVLPAPLDAAMLR 485
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV-VEFLLMVFCKTN-IRHIGSIMI 205
+ L+ ++ + R++ R+P+ + + V + M+ + +R +
Sbjct: 486 LAHASLEPMMTLLARLAAWPAGVMWLRMPDAPVLVLACVGVVWMLMPRGWPLRWAAPLTW 545
Query: 206 GITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ P + L + + G +++ +
Sbjct: 546 LPLVAPAPDAPPVGAFRLTVLDVGQGTSVLVETAR 580
>gi|229180603|ref|ZP_04307944.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus 172560W]
gi|228602846|gb|EEK60326.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus 172560W]
Length = 659
Score = 56.7 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
I ++ L+ HF Y ++ N+L +P LS +V+P +I +L M + L
Sbjct: 244 ISIISQLVSTPILLYHFGYFSPYSILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGF 303
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTN 196
V++ GL + ++H S+ + G P + +++ +
Sbjct: 304 ADVLSIGLSMSNDFLSHCESLPFTQLIFGETPFNLVAVYCASIVSILMVWERR 356
>gi|330910693|gb|EGH39203.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Escherichia coli AA86]
Length = 754
Score = 56.7 bits (135), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L+ + + L ++
Sbjct: 380 FHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++
Sbjct: 438 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|148360720|ref|YP_001251927.1| DNA uptake/competence protein ComA [Legionella pneumophila str.
Corby]
gi|296106214|ref|YP_003617914.1| DNA uptake/competence protein ComA [Legionella pneumophila 2300/99
Alcoy]
gi|148282493|gb|ABQ56581.1| DNA uptake/competence protein ComA [Legionella pneumophila str.
Corby]
gi|295648115|gb|ADG23962.1| DNA uptake/competence protein ComA [Legionella pneumophila 2300/99
Alcoy]
Length = 735
Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 56/139 (40%), Gaps = 2/139 (1%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ + + G +AN+ +IP++SF+++P L+ ++ L I +AW + +++
Sbjct: 367 PLTLHWYSYGSINGFLANLFSIPLVSFLIVPLALMTMITSPLHWSWILMKPLAWLVALLL 426
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM--VFCKTNIRHIGSIMIGITIIILFTF 215
+ I + + + L + + +H+ + I + + T
Sbjct: 427 QGLTYVEQIAGINITWSITSVTMMLAMTAGLFLRVLLPVKPFKHLAILWIILPLFPPRTA 486
Query: 216 PYSFSPDLLISEKGNLVAL 234
Y + I + G +A+
Sbjct: 487 IYPGEALINILDVGQGLAV 505
>gi|254508533|ref|ZP_05120651.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
parahaemolyticus 16]
gi|219548558|gb|EED25565.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
parahaemolyticus 16]
Length = 721
Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 39/175 (22%), Positives = 74/175 (42%), Gaps = 11/175 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F I + + N++ +P SFVV+PA IA ++ + + M +D + +
Sbjct: 353 FGGISISAIGYNLVFVPWFSFVVMPATFIAAVVSLFGYVDATIWGM---VDWALSVVVAS 409
Query: 164 SVAHNEFCIGRIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
S + + + IV+ F+ M+ T G ++ +T + L T + PD
Sbjct: 410 SAWAGDSWFSLSSQEVTILIVLACFIFMLPWLTR---FGIVLFALTFV-LVTVSWRPKPD 465
Query: 223 --LLISEKGNLVALVDKNT-LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDL 274
L I + G+ +A++ Y ++ S + LITP EA ++ D+
Sbjct: 466 WQLNILDVGHGLAILAVQGERALLYDTGAAWQQSNYAEQLITPLMEAKGIEVLDI 520
>gi|330878267|gb|EGH12416.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. morsprunorum str. M302280PT]
Length = 738
Score = 56.3 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISV 165
I + G AN+LA+P +S +V+P LI LL+ + + L+ + ++
Sbjct: 376 ISLSGPFANLLAVPWVSVIVLPPALIGTLLLPFPVVGEGLLWLAGGALEWLFVFLGWVAE 435
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
A + +P +++ ++ +++ K
Sbjct: 436 ALPAWLPSAVPGWAWLLSLLGAFVLLLPKG 465
Score = 41.7 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 31/250 (12%), Positives = 79/250 (31%), Gaps = 12/250 (4%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+L P G P FD+ + I A G ++ + + +++
Sbjct: 124 GERWRLAVKLKRPGGLVNPDAFDYQAWLLAQRIGATGTVVDGRRLAPAHAAWRDGIRQRL 183
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
++ A + + + + G + ++L I ++ + A
Sbjct: 184 LAVDAQGREGGLAALVLGDGSG---LSSGDWQVLQDTGTV-HLLVISGQHIGLLAGVIYA 239
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
++ L A I+ G ++V +L+
Sbjct: 240 LVA---GLARWGLWPRALPWLPSACALAFIAALGYGLLAGFEVPVRRACVMVGMVLL--W 294
Query: 194 KTNIRHIGSI---MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
+ RH+G + +I +++ + P +S + ++ + + ++S S+
Sbjct: 295 RLRFRHLGVVWPFLISFNAVLIVEPLVTLQPGFWLSFAAVGILVLIFSGRLGSWSWWQSW 354
Query: 251 IFSQWKSALI 260
+QW A+
Sbjct: 355 TRAQWLIAIG 364
>gi|221214762|ref|ZP_03587731.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia multivorans CGD1]
gi|221165301|gb|EED97778.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia multivorans CGD1]
Length = 823
Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/215 (14%), Positives = 81/215 (37%), Gaps = 5/215 (2%)
Query: 30 AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR--AN 87
F +FS+ + ++ + ++ + ++ +++ L+ + A
Sbjct: 366 VLSAGFWLSFSAVAVILLSVAGWRAVREHEADTDGEPPGAMRRLHMWAMRALHRLADAAR 425
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
+ + + F I + G + N AIP +SFVV P ++A L++ LD
Sbjct: 426 VQYAVTIGLAPLTAAWFAQISLSGPLGNAFAIPWVSFVVTP-TVLAGLVLPAPLDAAMLR 484
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV-VEFLLMVFCKTN-IRHIGSIMI 205
+ L+ ++ + R++ R+P+ + + V + M+ + +R +
Sbjct: 485 LAHASLEPMMTLLARLAAWPAGVMWLRMPDAPVLVLACVGVVWMLMPRGWPLRWAAPLTW 544
Query: 206 GITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ P + L + + G +++ +
Sbjct: 545 LPLVAPAPDAPPIGAFRLTVLDVGQGTSVLVETAR 579
>gi|330826316|ref|YP_004389619.1| DNA internalization-related competence protein ComEC/Rec2
[Alicycliphilus denitrificans K601]
gi|329311688|gb|AEB86103.1| DNA internalization-related competence protein ComEC/Rec2
[Alicycliphilus denitrificans K601]
Length = 796
Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 72/193 (37%), Gaps = 10/193 (5%)
Query: 50 GYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV 109
G++ S + + + + FL +R + + L+ F + +
Sbjct: 366 GFWLSFVAVAVLFATDMGAAGARPTGAAGRFLGLLREQWVVTLALTPLTLLL--FGQVSI 423
Query: 110 YGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
GL+AN+LAIP + VV P L+ +L L + AW + + + ++
Sbjct: 424 VGLLANLLAIPWTTLVVTPLALLGVLWAPL------WQAAAWCVQWLTVLLQWLAAWPWA 477
Query: 170 -FCIGRIPETSFVTIVVEFLLMVF-CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISE 227
+ P+ + V +L+ +R +G ++ + P +LL ++
Sbjct: 478 QVSLPMAPQWAGALAVAGGVLLALRLPWGVRALGLPLLLPALWWQPPRPAPGQFELLAAD 537
Query: 228 KGNLVALVDKNTL 240
G A++ +
Sbjct: 538 VGQGQAVLVRTAR 550
>gi|170683776|ref|YP_001744257.1| hypothetical protein EcSMS35_2207 [Escherichia coli SMS-3-5]
gi|170521494|gb|ACB19672.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli SMS-3-5]
Length = 754
Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 72/199 (36%), Gaps = 26/199 (13%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 331 AAAVAALIFWYQWFPGPEWQLPPVLRALVS---LIHLQLGITLLLMPVQIVIFHGISLTS 387
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+ AIP+++F+ +P L A+++ L L+ + + L ++ S+
Sbjct: 388 FIANLFAIPLVTFITVPLILAAMVVHLSGPLILEEGLWFLADRSLALLFW--GLKSLPEG 445
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD----- 222
I + + L+V + N R + ++ + +++ + PD
Sbjct: 446 WINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPDEWQVY 502
Query: 223 ---------LLISEKGNLV 232
++I+ G +
Sbjct: 503 MLDVGQGLAMVIARNGKAI 521
>gi|115378648|ref|ZP_01465799.1| DNA internalization-related competence protein ComEC/Rec2
[Stigmatella aurantiaca DW4/3-1]
gi|115364360|gb|EAU63444.1| DNA internalization-related competence protein ComEC/Rec2
[Stigmatella aurantiaca DW4/3-1]
Length = 908
Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/202 (10%), Positives = 60/202 (29%), Gaps = 5/202 (2%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ ++ D + + + PS +F + + +
Sbjct: 327 LALWRRADGLNSLAAAAVVLAVWAPSS-VGDLSLQLSFLAVMSLLLLTPALRGAVPIAPP 385
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ +++ L A++ + ++ + F + GLI+NI+ +P+
Sbjct: 386 DAQEKRRLVRIAGQARETILETFCASVAV--TVASLPLVASAFGRASLAGLISNIVCLPL 443
Query: 122 LSFVV-IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETS 179
+ AG A+ + L AW ++++ + + + +
Sbjct: 444 CGLLTGFAAGGAALFTVAPVLATPVLWGGAWTSEVLLVLTRFFAAVPLATVDLPPFGAVT 503
Query: 180 FVTIVVEFLLMVFCKTNIRHIG 201
+ R G
Sbjct: 504 TLLYAAGLGAWALGTGRWRFAG 525
>gi|319761824|ref|YP_004125761.1| DNA internalization-related competence protein comec/rec2
[Alicycliphilus denitrificans BC]
gi|317116385|gb|ADU98873.1| DNA internalization-related competence protein ComEC/Rec2
[Alicycliphilus denitrificans BC]
Length = 799
Score = 56.3 bits (134), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 72/193 (37%), Gaps = 10/193 (5%)
Query: 50 GYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV 109
G++ S + + + + FL +R + + L+ F + +
Sbjct: 369 GFWLSFVAVAVLFATDMGAAGARPTGAAGRFLGLLREQWVVTLALTPLTLLL--FGQVSI 426
Query: 110 YGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
GL+AN+LAIP + VV P L+ +L L + AW + + + ++
Sbjct: 427 VGLLANLLAIPWTTLVVTPLALLGVLWAPL------WQAAAWCVQWLTVLLQWLAAWPWA 480
Query: 170 -FCIGRIPETSFVTIVVEFLLMVF-CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISE 227
+ P+ + V +L+ +R +G ++ + P +LL ++
Sbjct: 481 QVSLPMAPQWAGALAVAGGVLLALRLPWGVRALGLPLLLPALWWQPPRPAPGQFELLAAD 540
Query: 228 KGNLVALVDKNTL 240
G A++ +
Sbjct: 541 VGQGQAVLVRTAR 553
>gi|330966264|gb|EGH66524.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. actinidiae str. M302091]
Length = 738
Score = 56.0 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISV 165
I + G AN+LA+P +S +V+P LI LL+ + + L+ + ++
Sbjct: 376 ISLSGPFANLLAVPWVSVIVLPPALIGTLLLPFPVVGEGLLWLAGGALEWLFVFLGWVAE 435
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
A + +P +++ ++ +++ K
Sbjct: 436 ALPAWLPSAVPGWAWLLSLLGAFVLLLPKG 465
Score = 41.3 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 31/250 (12%), Positives = 79/250 (31%), Gaps = 12/250 (4%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+L P G P FD+ + I A G ++ + + +++
Sbjct: 124 GERWRLAVKLKRPGGLVNPDAFDYQAWLLAQRIGATGTVVDGRRLAPAHAAWRDGIRQRL 183
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
++ A + + + + G + ++L I ++ + A
Sbjct: 184 LAVDAQGREGGLAALVLGDGSG---LSSGDWQVLQDTGTV-HLLVISGQHIGLLAGVIYA 239
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
++ L A I+ G ++V +L+
Sbjct: 240 LVA---GLARWGLWPRALPWLPSACALAFIAALGYGLLAGFEVPVRRACVMVGMVLL--W 294
Query: 194 KTNIRHIGSI---MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
+ RH+G + +I +++ + P +S + ++ + + ++S S+
Sbjct: 295 RLRFRHLGVVWPFLISFNAVLIVEPLVTLQPGFWLSFAAVGILVLIFSGRLGSWSWWQSW 354
Query: 251 IFSQWKSALI 260
+QW A+
Sbjct: 355 TRAQWLIAIG 364
>gi|323953380|gb|EGB49246.1| competence protein [Escherichia coli H252]
Length = 677
Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L+ + + L ++
Sbjct: 380 FHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++
Sbjct: 438 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|300118682|ref|ZP_07056410.1| DNA internalization-related competence protein [Bacillus cereus
SJ1]
gi|298723931|gb|EFI64645.1| DNA internalization-related competence protein [Bacillus cereus
SJ1]
Length = 773
Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 5/138 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
I ++ L+ HF Y + NIL +P LS +V+P +I ++ M + L
Sbjct: 358 ISLISQLVSTSILLYHFGYYSPYSIFLNILYVPFLSLIVLPCSIIVLICMPIIPFLAKSF 417
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGSI 203
V++ GL+ +++ S+ G+ P V + +++ + I G +
Sbjct: 418 ANVLSIGLNFSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRI-SKGMM 476
Query: 204 MIGITIIILFTFPYSFSP 221
I I + + + P
Sbjct: 477 FISAGIFLFISTGHYVYP 494
>gi|258591115|emb|CBE67410.1| putative Metallo-beta-lactamase superfamily [NC10 bacterium 'Dutch
sediment']
Length = 834
Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/185 (12%), Positives = 60/185 (32%), Gaps = 18/185 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + AI + S+ W W + +
Sbjct: 378 LFDVGFQLTFVATGAIVVAVNRLP---SASLPVPWRWAVTPLV-----------LSIAAF 423
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWG 152
+ L+ FH + + G++AN+ +P+ + L A+L ++ ++ W
Sbjct: 424 LGTAPILVSTFHRLSLIGILANLPIVPLSGLLTGAGMLFAVLATVVPHFLGWFTVLIGWL 483
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVT---IVVEFLLMVFCKTNIRHIGSIMIGITI 209
+D+++ + + P V + + + + +R+ +
Sbjct: 484 IDLLVGLVGWFARLPCASVQLFSPSIPMVICYYVTLGTAIAAMGRRWLRYTALAAAAACV 543
Query: 210 IILFT 214
+++
Sbjct: 544 VLIGV 548
>gi|218700568|ref|YP_002408197.1| hypothetical protein ECIAI39_2234 [Escherichia coli IAI39]
gi|218370554|emb|CAR18361.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI39]
Length = 754
Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 72/199 (36%), Gaps = 26/199 (13%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 331 AAAVAALIFWYQWFPCPAWQLPPVLRAVVS---LIHLQLGITLLLMPVQIVIFHGISLTS 387
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+ AIP+++F+ +P L A+++ L L+ + + L ++ S+
Sbjct: 388 FIANLFAIPLVTFITVPLILAAMVVHLSGPLILEEGLWFLADRSLALLFW--GLKSLPEG 445
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD----- 222
I + + L+V + N R + ++ + +++ + PD
Sbjct: 446 WINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPDEWQVY 502
Query: 223 ---------LLISEKGNLV 232
++I+ G +
Sbjct: 503 MLDVGQGLAMVIARNGKAI 521
>gi|75910535|ref|YP_324831.1| ComEC/Rec2-like protein [Anabaena variabilis ATCC 29413]
gi|75704260|gb|ABA23936.1| ComEC/Rec2-related protein [Anabaena variabilis ATCC 29413]
Length = 798
Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 71/191 (37%), Gaps = 24/191 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + +G S+P + S W I+S+ ++ +
Sbjct: 391 GFQLSFLAT------LGLVVSVPAIT----SFLDWVPPAIASL---------ISVPLAAT 431
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWG 152
+ F +P Y L+ NI+ P++S + I + A+ +IL + G + +
Sbjct: 432 IWTLPLQLFVFGVVPAYSLLLNIITTPLISIISIGGIISAMFALILPGAGSFVAGFLHYP 491
Query: 153 LDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVFCKTNI--RHIGSIMIGITI 209
D +I + S +G I + I + +V+ T R + +I I +
Sbjct: 492 TDWLIRLVEIFSQLPGNSLVLGSISTWQLLAIY-GLVFLVWLVTWWQKRWWFAGLIAIGL 550
Query: 210 IILFTFPYSFS 220
++ + + +
Sbjct: 551 VLFPAWHSAST 561
>gi|218704340|ref|YP_002411859.1| hypothetical protein ECUMN_1106 [Escherichia coli UMN026]
gi|293404218|ref|ZP_06648212.1| ycaI protein [Escherichia coli FVEC1412]
gi|298379998|ref|ZP_06989603.1| ycaI protein [Escherichia coli FVEC1302]
gi|300901657|ref|ZP_07119717.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 198-1]
gi|331662326|ref|ZP_08363249.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli TA143]
gi|218431437|emb|CAR12315.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli UMN026]
gi|291428804|gb|EFF01829.1| ycaI protein [Escherichia coli FVEC1412]
gi|298279696|gb|EFI21204.1| ycaI protein [Escherichia coli FVEC1302]
gi|300354950|gb|EFJ70820.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli MS 198-1]
gi|331060748|gb|EGI32712.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli TA143]
Length = 754
Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 58/147 (39%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 380 FHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + +++ +
Sbjct: 438 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|323190733|gb|EFZ76002.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli RN587/1]
Length = 754
Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 58/147 (39%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIP---AGLIAILLMILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P A ++A L L L+ + + L ++
Sbjct: 380 FHGISLTSFIANLFAIPLVTFITVPLILAAMVAHLSGPLILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + +++ +
Sbjct: 438 GLKSLPEGWINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|229135151|ref|ZP_04263951.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus BDRD-ST196]
gi|228648279|gb|EEL04314.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus BDRD-ST196]
Length = 692
Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 57/170 (33%), Gaps = 34/170 (20%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F + + S + ++ S I + +
Sbjct: 245 GFQFSFVGSFSLL----------------LSAPILLGRSNGIVRNSIYISIISQL----- 283
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG- 152
+++ L+ HF Y + N++ +P LS +V+P +I ++ M + IPF
Sbjct: 284 -ASTPILLYHFGYFSPYSIFLNLIYVPFLSIIVLPCSIIILICMPV----IPFFAKGIAY 338
Query: 153 -LDIIIHIAHRI-----SVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKT 195
L + + I++ S G+ P + + V +
Sbjct: 339 VLSLCLTISNDFLSYCESFPFIRLTFGQTPLFLVAIYCFSIVSIFVIWER 388
>gi|229169073|ref|ZP_04296788.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH621]
gi|228614301|gb|EEK71411.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH621]
Length = 692
Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 57/170 (33%), Gaps = 34/170 (20%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F + + S + ++ S I + +
Sbjct: 245 GFQFSFVGSFSLL----------------LSAPILLGRSNGIVRNSIYISIISQL----- 283
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG- 152
+++ L+ HF Y + N++ +P LS +V+P +I ++ M + IPF
Sbjct: 284 -ASTPILLYHFGYFSPYSIFLNLIYVPFLSIIVLPCSIIILICMPV----IPFFAKGIAY 338
Query: 153 -LDIIIHIAHRI-----SVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKT 195
L + + I++ S G+ P + + V +
Sbjct: 339 VLSLCLTISNDFLSYCESFPFIRLTFGQTPLFLVAIYCFSIVSIFVIWER 388
>gi|77166130|ref|YP_344655.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosococcus oceani ATCC 19707]
gi|76884444|gb|ABA59125.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosococcus oceani ATCC 19707]
Length = 784
Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA-ILLMILSLDNIPFGVMAWGLDI 155
+ L+ F + + + N++A+P + F+V+P L+ ILL+ L + L
Sbjct: 404 APILLYQFQRLSLIAPVTNLVAVPWMGFLVVPPLLLGTILLIPFPLLGTALISLGDYLLA 463
Query: 156 IIH--IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRH 199
++ +A ++ ++ P + + ++ LL++ + R
Sbjct: 464 LLWNILAWCSTLPVAQWEHAGPPLWALLPAILGSLLLLAPRGLPGRW 510
>gi|163942081|ref|YP_001646965.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
weihenstephanensis KBAB4]
gi|163864278|gb|ABY45337.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
weihenstephanensis KBAB4]
Length = 773
Score = 56.0 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 57/170 (33%), Gaps = 34/170 (20%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F + + S + ++ S I + +
Sbjct: 326 GFQFSFVGSFSLL----------------LSAPILLGRSNGIVRNSIYISIISQL----- 364
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG- 152
+++ L+ HF Y + N++ +P LS +V+P +I ++ M + IPF
Sbjct: 365 -ASTPILLYHFGYFSPYSIFLNLIYVPFLSIIVLPCSIIILICMPV----IPFFAKGIAY 419
Query: 153 -LDIIIHIAHRI-----SVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKT 195
L + + I++ S G+ P + + V +
Sbjct: 420 VLSLCLTISNDFLSYCESFPFIRLTFGQTPLFLVAIYCFSIVSIFVIWER 469
>gi|229062024|ref|ZP_04199349.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH603]
gi|228717176|gb|EEL68851.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH603]
Length = 692
Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 58/170 (34%), Gaps = 34/170 (20%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F + + S + ++ S I + +
Sbjct: 245 GFQFSFVGSFSLL----------------LSAPILLGRSNGIVRNSIYISIISQL----- 283
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG- 152
+++ L+ HF Y + N++ +P LS +V+P +I ++ M + IPF
Sbjct: 284 -ASTPILLYHFGYFSPYSIFLNLIYVPFLSIIVLPCSIIILICMPV----IPFFAKGIAY 338
Query: 153 -LDIIIHIAHRI-----SVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKT 195
L + + I++ S G+ P + + VF +
Sbjct: 339 VLSLCLTISNDFLSYCESFPFIRLTFGQTPLFLVAIYCFSIVSIFVFWER 388
>gi|254435348|ref|ZP_05048855.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosococcus oceani AFC27]
gi|207088459|gb|EDZ65731.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosococcus oceani AFC27]
Length = 778
Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA-ILLMILSLDNIPFGVMAWGLDI 155
+ L+ F + + + N++A+P + F+V+P L+ ILL+ L + L
Sbjct: 398 APILLYQFQRLSLIAPVTNLVAVPWMGFLVVPPLLLGTILLIPFPLLGTALISLGDYLLA 457
Query: 156 IIH--IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRH 199
++ +A ++ ++ P + + ++ LL++ + R
Sbjct: 458 LLWNILAWCSTLPVAQWEHAGPPLWALLPAILGSLLLLAPRGLPGRW 504
>gi|238792397|ref|ZP_04636031.1| hypothetical protein yinte0001_13250 [Yersinia intermedia ATCC
29909]
gi|238728323|gb|EEQ19843.1| hypothetical protein yinte0001_13250 [Yersinia intermedia ATCC
29909]
Length = 725
Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 52/121 (42%), Gaps = 10/121 (8%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIH-IAH 161
FH + ++ + AN+ A+PI+S + +P L+A+ + L ++ + + + L ++ + H
Sbjct: 351 FHGVSLFAIPANLWAVPIVSLLTVPCVLLALACIPLPTVAGLFWFLADISLSAVLWPLNH 410
Query: 162 RISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ S V +L ++ + S IG+ ++ + ++
Sbjct: 411 LKAGWL------HTGSASVVVAYAGWLAILIW--RFQWWRSYPIGVIVLCVNLVLFTQRR 462
Query: 222 D 222
D
Sbjct: 463 D 463
>gi|320642906|gb|EFX12107.1| ComEC family competence protein [Escherichia coli O157:H- str.
493-89]
gi|320648363|gb|EFX17018.1| ComEC family competence protein [Escherichia coli O157:H- str. H
2687]
Length = 651
Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 60/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L LD + + L ++
Sbjct: 380 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILDQGLWFLADRSLALL---- 435
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
+ + I E + L+V + N R + ++ + + +++ +
Sbjct: 436 -FLGLKSLPEGWINIAERWQWLSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLVMVIARNGKAI 521
>gi|193064633|ref|ZP_03045712.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli E22]
gi|194428391|ref|ZP_03060932.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli B171]
gi|260843163|ref|YP_003220941.1| hypothetical protein ECO103_0956 [Escherichia coli O103:H2 str.
12009]
gi|192927690|gb|EDV82305.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli E22]
gi|194413606|gb|EDX29887.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli B171]
gi|257758310|dbj|BAI29807.1| conserved predicted inner membrane protein [Escherichia coli
O103:H2 str. 12009]
gi|323159539|gb|EFZ45519.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli E128010]
Length = 754
Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 58/147 (39%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 380 FHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + +++ +
Sbjct: 438 GLKSLPEGWINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|297516028|ref|ZP_06934414.1| hypothetical protein EcolOP_00170 [Escherichia coli OP50]
Length = 531
Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 59/147 (40%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 157 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW-- 214
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + +++ +
Sbjct: 215 GLKSLPEGWINIAECWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKP 271
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 272 RPDEWQLYMLDVGQGLAMVIARNGKAI 298
>gi|229129606|ref|ZP_04258574.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus BDRD-Cer4]
gi|228653723|gb|EEL09593.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus BDRD-Cer4]
Length = 659
Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
I ++ L+ HF Y ++ N+L +P LS +V+P +I +L M + L
Sbjct: 244 ISIISQLVSTPILLYHFGYFSPYSILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGF 303
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTN 196
V++ GL + +++ S+ + G P + +++ +
Sbjct: 304 ADVLSIGLSMSNDFLSYCESLPFTQLIFGETPLNLVAVYCASIVSILMVWERR 356
>gi|229152529|ref|ZP_04280719.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus m1550]
gi|228630895|gb|EEK87534.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus m1550]
Length = 773
Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
I ++ L+ HF Y ++ N+L +P LS +V+P +I +L M + L
Sbjct: 358 ISIISQLVSTPILLYHFGYFSPYSILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGF 417
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTN 196
V++ GL + +++ S+ + G P + +++ +
Sbjct: 418 ADVLSIGLSMSNDFLSYCESLPFTQLIFGETPLNLVAVYCASIVSILMVWERR 470
>gi|218233672|ref|YP_002369135.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus B4264]
gi|218161629|gb|ACK61621.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus B4264]
Length = 773
Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
I ++ L+ HF Y ++ N+L +P LS +V+P +I +L M + L
Sbjct: 358 ISIISQLVSTPILLYHFGYFSPYSILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGF 417
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTN 196
V++ GL + +++ S+ + G P + +++ +
Sbjct: 418 ADVLSIGLSMSNDFLSYCESLPFTQLIFGETPLNLVAVYCASIVSILMVWERR 470
>gi|30022403|ref|NP_834034.1| ComE operon protein 3 [Bacillus cereus ATCC 14579]
gi|29897961|gb|AAP11235.1| ComE operon protein 3 [Bacillus cereus ATCC 14579]
Length = 773
Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
I ++ L+ HF Y ++ N+L +P LS +V+P +I +L M + L
Sbjct: 358 ISIISQLVSTPILLYHFGYFSPYSILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGF 417
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTN 196
V++ GL + +++ S+ + G P + +++ +
Sbjct: 418 ADVLSIGLSMSNDFLSYCESLPFTQLIFGETPLNLVAVYCASIVSILMVWERR 470
>gi|331084374|ref|ZP_08333478.1| DNA internalization-like competence protein ComEC/Rec2
[Lachnospiraceae bacterium 6_1_63FAA]
gi|330401638|gb|EGG81219.1| DNA internalization-like competence protein ComEC/Rec2
[Lachnospiraceae bacterium 6_1_63FAA]
Length = 752
Score = 55.6 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 59/193 (30%), Gaps = 12/193 (6%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D +F + I +G T K I
Sbjct: 293 LYDSSFLLSFGAILGLGLVQPAFFSKKMQRGKKTLGEKTKKLFMDGIKGGIAVWAVLL-- 350
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM--ILSLDNIPFGVMAW 151
++ F+ I V+G+I N+L +P ++I ++L M I+SL +
Sbjct: 351 ----PMMMYFFYEISVFGIIINLLVLPTAGILLISGCAGSLLGMCGIISLGKLVTAPALL 406
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC---KTNIR-HIGSIMIGI 207
L+ I + I I P L ++ + R I++
Sbjct: 407 ILEAYISVGKTIQNIPFAVWITGKPALWKCVCYYVVLFLLLWIKKQKRWRKFFYGILVFC 466
Query: 208 TIIILFTFPYSFS 220
+++ P+
Sbjct: 467 ILLLYGKLPWETR 479
>gi|284920764|emb|CBG33827.1| putative competence-related protein [Escherichia coli 042]
Length = 754
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 58/147 (39%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIP---AGLIAILLMILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP ++F+ +P A ++A L L L+ + + L ++
Sbjct: 380 FHGISLTSFIANLFAIPQVTFITVPLILAAMVAHLSGPLILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++ +
Sbjct: 438 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|301063473|ref|ZP_07204005.1| DNA internalization competence protein ComEC/Rec2-like protein
[delta proteobacterium NaphS2]
gi|300442412|gb|EFK06645.1| DNA internalization competence protein ComEC/Rec2-like protein
[delta proteobacterium NaphS2]
Length = 751
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/206 (18%), Positives = 75/206 (36%), Gaps = 11/206 (5%)
Query: 16 TIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPK--MIYSSESHNTWTWKKI 73
++ G+ L G F F +F ++ G + P +H ++
Sbjct: 265 SLAGLIILFLDPGALFTPSFQLSF------VAVTGILWLTPPILKRLGVRTHERSEYRSR 318
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
++ + A + + +FH IP+ + AN+ IPIL V+P GL++
Sbjct: 319 GRSIFNYAAGL-ATVSFCALYFLLPLTVYYFHRIPLVSVPANLSTIPILGLWVLPLGLLS 377
Query: 134 ILLMILSLD--NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
+LL+ SL + + AWGLDI++ + + P+ + V
Sbjct: 378 VLLLPFSLQVASFLLHMSAWGLDIMMGVVAFWASIPWASIWTVTPDFFETGLFYALTFFV 437
Query: 192 FCKTNIRHIGSIMIGITIIILFTFPY 217
F + + I + + +
Sbjct: 438 FFAFQKKWARMGLAAIIFLTVMDVAF 463
>gi|296504818|ref|YP_003666518.1| ComE operon protein 3 [Bacillus thuringiensis BMB171]
gi|296325870|gb|ADH08798.1| ComE operon protein 3 [Bacillus thuringiensis BMB171]
Length = 773
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
I ++ L+ HF Y ++ N+L +P LS +V+P +I +L M + L
Sbjct: 358 ISIISQLVSTPILLYHFGYFSPYSILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGF 417
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTN 196
V++ GL + +++ S+ + G P + +++ +
Sbjct: 418 ADVLSIGLSMSNDFLSYCESLPFTQLIFGETPFNLVAVYCASIVSILMVWERR 470
>gi|228954612|ref|ZP_04116636.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228805058|gb|EEM51653.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar kurstaki str. T03a001]
Length = 659
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
I ++ L+ HF Y ++ N+L +P LS +V+P +I +L M + L
Sbjct: 244 ISIISQLVSTPILLYHFGYFSPYSILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGF 303
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTN 196
V++ GL + +++ S+ + G P + +++ +
Sbjct: 304 ADVLSIGLSMSNDFLSYCESLPFTQLIFGETPFNLVAVYCASIVSILMVWERR 356
>gi|228960595|ref|ZP_04122242.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228799074|gb|EEM46044.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar pakistani str. T13001]
Length = 659
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
I ++ L+ HF Y ++ N+L +P LS +V+P +I +L M + L
Sbjct: 244 ISIISQLVSTPILLYHFGYFSPYSILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGF 303
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTN 196
V++ GL + +++ S+ + G P + +++ +
Sbjct: 304 ADVLSIGLSMSNDFLSYCESLPFTQLIFGETPFNLVAVYCASIVSILMVWERR 356
>gi|229048032|ref|ZP_04193607.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH676]
gi|228723276|gb|EEL74646.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH676]
Length = 659
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
I ++ L+ HF Y ++ N+L +P LS +V+P +I +L M + L
Sbjct: 244 ISIISQLVSTPILLYHFGYFSPYSILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGF 303
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTN 196
V++ GL + +++ S+ + G P + +++ +
Sbjct: 304 ADVLSIGLSMSNDFLSYCESLPFTQLIFGETPFNLVAVYCASIVSILMVWERR 356
>gi|229071832|ref|ZP_04205045.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus F65185]
gi|228711262|gb|EEL63224.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus F65185]
Length = 659
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
I ++ L+ HF Y ++ N+L +P LS +V+P +I +L M + L
Sbjct: 244 ISIISQLVSTPILLYHFGYFSPYSILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGF 303
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTN 196
V++ GL + +++ S+ + G P + +++ +
Sbjct: 304 ADVLSIGLSMSNDFLSYCESLPFTQLIFGETPFNLVAVYCASIVSILMVWERR 356
>gi|229081589|ref|ZP_04214085.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock4-2]
gi|228701695|gb|EEL54185.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock4-2]
Length = 659
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
I ++ L+ HF Y ++ N+L +P LS +V+P +I +L M + L
Sbjct: 244 ISIISQLVSTPILLYHFGYFSPYSILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGF 303
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTN 196
V++ GL + +++ S+ + G P + +++ +
Sbjct: 304 ADVLSIGLSMSNDFLSYCESLPFTQLIFGETPFNLVAVYCASIVSILMVWERR 356
>gi|229111799|ref|ZP_04241345.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock1-15]
gi|228671555|gb|EEL26853.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock1-15]
Length = 659
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
I ++ L+ HF Y ++ N+L +P LS +V+P +I +L M + L
Sbjct: 244 ISIISQLVSTPILLYHFGYFSPYSILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGF 303
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTN 196
V++ GL + +++ S+ + G P + +++ +
Sbjct: 304 ADVLSIGLSMSNDFLSYCESLPFTQLIFGETPFNLVAVYCASIVSILMVWERR 356
>gi|229146897|ref|ZP_04275261.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus BDRD-ST24]
gi|228636496|gb|EEK92962.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus BDRD-ST24]
Length = 659
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
I ++ L+ HF Y ++ N+L +P LS +V+P +I +L M + L
Sbjct: 244 ISIISQLVSTPILLYHFGYFSPYSILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGF 303
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTN 196
V++ GL + +++ S+ + G P + +++ +
Sbjct: 304 ADVLSIGLSMSNDFLSYCESLPFTQLIFGETPFNLVAVYCASIVSILMVWERR 356
>gi|152976755|ref|YP_001376272.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus subsp. cytotoxis NVH 391-98]
gi|152025507|gb|ABS23277.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cytotoxicus NVH 391-98]
Length = 780
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 17/144 (11%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
+ ++ + HF Y + N++ +P LS +V+P +I L M++ F
Sbjct: 359 LSLISQLASIPITLYHFGYFSPYSIPLNLIYVPFLSCIVLPCSIIIFLCMMI------FP 412
Query: 148 VMAWGLDIIIHIA---------HRISVAHNEFCIGRIPETSFVTIVVEFLLMVF-CKTNI 197
+A G+ ++ I + + F G+ P V +++ + I
Sbjct: 413 PLAKGIAHLLSICLRMSNDVLQYCEAFPFVRFTFGQTPPFLVVLYSFSIIIICIVWERAI 472
Query: 198 RHIGSIMIGITIIILFTFPYSFSP 221
R I I + SP
Sbjct: 473 RKIFLYF-AFGIFFFLCMCHYLSP 495
>gi|229013546|ref|ZP_04170679.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
mycoides DSM 2048]
gi|228747706|gb|EEL97576.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
mycoides DSM 2048]
Length = 692
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 40/106 (37%), Gaps = 22/106 (20%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F + + S + ++ S I + +
Sbjct: 245 GFQFSFVGSFSLL----------------LSAPILLGRSNGIVRNSIYISIISQL----- 283
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
+++ L+ HF Y + N++ +P LS +V+P +I ++ M +
Sbjct: 284 -ASTPILLYHFGYFSPYSIFLNLIYVPFLSIIVLPCSIIILICMPV 328
>gi|237748449|ref|ZP_04578929.1| DNA internalization-related competence protein [Oxalobacter
formigenes OXCC13]
gi|229379811|gb|EEO29902.1| DNA internalization-related competence protein [Oxalobacter
formigenes OXCC13]
Length = 809
Score = 55.2 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 58/187 (31%), Gaps = 16/187 (8%)
Query: 18 EGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIK 77
GI L P PG F + + I Y +++ +
Sbjct: 359 AGIICLFDPWALLQPG-----FWLSFGAVGMILY------ATSGRTGKMDENPSRLNRFR 407
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
S A + + F I V G IAN +AIP++S VV P LI +L
Sbjct: 408 HSLSTA--AATQWAVTIGLVPLTMLFFGRISVIGPIANAVAIPLVSTVVTPLALIGSIL- 464
Query: 138 ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV-VEFLLMVFCKTN 196
++ V + ++ +S P + L M+ K
Sbjct: 465 PEPVNAYVLTVAHFLTRLLAIFLEWLSSFSFAVWTAPAPSFYLILFAMAGTLWMLAPKGW 524
Query: 197 I-RHIGS 202
R++G
Sbjct: 525 PHRYLGV 531
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 36/238 (15%), Positives = 83/238 (34%), Gaps = 30/238 (12%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS-------SE 63
+ RL P G A P FD+ + +GI A GY + P++
Sbjct: 149 ISPGQRWQLNVRLKRPHGNANPDGFDYELWLFEQGIRATGYVNNDPRLPDKNVLTDSFVS 208
Query: 64 SHNTWTWKKISSIKQSF--------LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIAN 115
+ W + S +++ + + + S + F+ I++
Sbjct: 209 TPMNWVNRVRSVLRERIYRALPNCEYAGVMVALVIGDQKAISQSDWEIFNRTG----ISH 264
Query: 116 ILAIPILSFVVIPAGLIAILL------MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
++AI L + + + L A+ + + P + A + I + +++A+
Sbjct: 265 LVAISGLH-ITMISSLFALFIGSLWRRSFFTGKQWPLILPAQKVAAIAGV--LMALAYVA 321
Query: 170 FCIGRIPETSFVTIVVEFLLMVFCKTNI-RHIGSIMIGITIIILFTFPYSFSPDLLIS 226
+P + +++ + + + R ++++ II LF P +S
Sbjct: 322 LAGFGVPARRTLCMII-IVAIALWTGRLTRFSHTLLVAAGIICLFDPWALLQPGFWLS 378
>gi|237800331|ref|ZP_04588792.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. oryzae str. 1_6]
gi|331023188|gb|EGI03245.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. oryzae str. 1_6]
Length = 478
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISV 165
I + G AN+LA+P +S +V+P LI LL+ + + + L+ + ++
Sbjct: 372 ISLSGPFANLLAVPWVSVIVLPLALIGTLLLPVPVVGEGLLWLAGGALEWLFVFLGWVAD 431
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITI 209
+ +P +++ ++ +++ + +R +G ++ + +
Sbjct: 432 VLPAWLPSAVPVWAWLISLLGAFVLLLPRGVPMRPLGWPLLLLCV 476
>gi|317128289|ref|YP_004094571.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cellulosilyticus DSM 2522]
gi|315473237|gb|ADU29840.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cellulosilyticus DSM 2522]
Length = 769
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/161 (11%), Positives = 61/161 (37%), Gaps = 2/161 (1%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIP 145
+ + ++ HF+ I + ++ N++ IP +S ++P + ++ +L L ++
Sbjct: 355 VTFIAQLVSMPLILYHFYEISLLSVVINLIFIPFISMWILPLSFLTVIFQLLFPPLSHVT 414
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
F + + L + S + + P + ++ F+++ + + I
Sbjct: 415 FYIASTSLSFSHKVLDVASKWKWDMLVFGQPSIYILVLLYAFIILCLVSFEKKIVILKWI 474
Query: 206 GITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSN 246
+++I F P + ++ + + ++
Sbjct: 475 SSSLLIGVLSFQYFQPYFYAFAELTILDVGQGDAIVITLPR 515
>gi|127512566|ref|YP_001093763.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella loihica PV-4]
gi|126637861|gb|ABO23504.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella loihica PV-4]
Length = 761
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 59/155 (38%), Gaps = 15/155 (9%)
Query: 108 PVYGLIANILAIPILSFVVIPAGLIAILLMILSLD-----NIPFGVMAWGLDIIIHIAHR 162
Y LI N++ +P S VVIP +A++ I+ + ++P ++ + +
Sbjct: 385 APYALIFNLIFVPWFSLVVIPLSFMALITWIIGIYLGVSVSLPLYLLDLAISPMTLAFDW 444
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK---TNIRHIGSIMIGITIIILFTFPYSF 219
+ + + S +V L ++ + R + ++ + + + F
Sbjct: 445 LGELPLHWLPASMQLVS--ALVFGLLGLILWRLASGAWRWM-IPVLFMPLCLWFLPQRLT 501
Query: 220 SP---DLLISEKGNLVA-LVDKNTLISNYSNPPSF 250
P + + + G ++ +V+K Y +F
Sbjct: 502 DPKSWQVHLLDVGQGLSLVVEKQGRALIYDTGAAF 536
>gi|218780624|ref|YP_002431942.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfatibacillum alkenivorans AK-01]
gi|218762008|gb|ACL04474.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfatibacillum alkenivorans AK-01]
Length = 800
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 66/189 (34%), Gaps = 15/189 (7%)
Query: 32 PGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTY 91
P LF+ F + + I Y TW K + L + A +G
Sbjct: 335 PALFNVGFQLSFTAVFCILYGLKKIPFKTIP---ITWGEKARRRVLIYLLIPVIALLG-- 389
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVM 149
+ ++ +F I + G +AN++ +P++ F V+P L+A L+ + + I
Sbjct: 390 ----TAPIVLHYFDRISLIGPLANLIVVPLIGFAVLPLALMAGLIHPILPWMSGIMTAAA 445
Query: 150 AWGLDIIIHIAHRISVAHNEFCIGRIP-ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGIT 208
L ++ ++ ++ + P ++ K G+ ++ +
Sbjct: 446 GHLLQFVLLLSKWLAAVPFASAMPVKPNALEMGLYYAALFALINVKKKW---GAALLAMC 502
Query: 209 IIILFTFPY 217
++
Sbjct: 503 LVGGLADAG 511
>gi|323976700|gb|EGB71788.1| competence protein [Escherichia coli TW10509]
Length = 754
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 58/147 (39%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L ++ + + L ++
Sbjct: 380 FHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPLIVEQGVWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++
Sbjct: 438 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDEWQVYMLDVGQGLAMVIARNGKAI 521
>gi|327253703|gb|EGE65332.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia coli STEC_7v]
Length = 754
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 58/147 (39%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L ++ + + L ++
Sbjct: 380 FHGISLTSFIANLFAIPLVTFITVPLILAAMVMHLSGPLIVEQGVWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + +++ +
Sbjct: 438 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRALPAMCVAGGLLMCWPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDAWQVYMLDVGQGLAMVIARNGKAI 521
>gi|117623131|ref|YP_852044.1| YcaI [Escherichia coli APEC O1]
gi|115512255|gb|ABJ00330.1| YcaI [Escherichia coli APEC O1]
Length = 621
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 51/123 (41%), Gaps = 9/123 (7%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L+ + + L ++
Sbjct: 380 FHGISLTSFIANLFAIPLVTFITVPLILAAMVVHLSGPFILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++
Sbjct: 438 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCLPLWQKP 494
Query: 220 SPD 222
PD
Sbjct: 495 RPD 497
>gi|311107078|ref|YP_003979931.1| DNA internalization-related competence protein ComEC/Rec2
[Achromobacter xylosoxidans A8]
gi|310761767|gb|ADP17216.1| DNA internalization-related competence protein ComEC/Rec2
[Achromobacter xylosoxidans A8]
Length = 779
Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 60/160 (37%), Gaps = 12/160 (7%)
Query: 58 MIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANIL 117
+ W + ++ + Q+ ++ +G + L H + + +AN +
Sbjct: 346 ADAPVDHEAGWRRRCVARLAQATRLQLMVTVGL------TPLLAFLVHQVSLGSPLANAV 399
Query: 118 AIPILSFVVIPAGLI-AILLMILSLDNIPFGVMAWGL---DIIIHIAHRIS-VAHNEFCI 172
AIP+++FVV P L+ A L ++ + WGL D+I+ + A +
Sbjct: 400 AIPVVTFVVTPLALLCAALSVLPGAQALAAFAGQWGLLAFDLIMAPVSWVGNAAWASVPV 459
Query: 173 GRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIII 211
P + V + + RH+G I + +
Sbjct: 460 AAAPWPWLLLAVAGMAWALQVRGWPGRHLGWICMLPLLFW 499
>gi|17229475|ref|NP_486023.1| competence protein [Nostoc sp. PCC 7120]
gi|17131073|dbj|BAB73682.1| competence protein [Nostoc sp. PCC 7120]
Length = 798
Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 70/191 (36%), Gaps = 24/191 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + +G S+P + S W I+S+ ++ +
Sbjct: 391 GFQLSFLAT------LGLVVSVPAIT----SFLGWIPPAIASL---------ISVPLAAT 431
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWG 152
+ F +P Y L+ NI+ P++S + I + A+ +IL + G + +
Sbjct: 432 IWTLPLQLFVFGVVPAYSLLLNIITTPLISIISIGGIISAMFALILSGAGSFVAGFLHYP 491
Query: 153 LDIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVFCKTNI--RHIGSIMIGITI 209
D +I + S +G I + I + +V+ R + ++ I +
Sbjct: 492 TDWLIKLVEIFSQLPGNSLIVGSISTWQLLAIY-GLVFLVWLVNWWQKRWWFAGLMAIGL 550
Query: 210 IILFTFPYSFS 220
++ + + +
Sbjct: 551 VLFPAWHSAST 561
>gi|323967160|gb|EGB62584.1| competence protein [Escherichia coli M863]
Length = 754
Score = 54.8 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 58/147 (39%), Gaps = 23/147 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+ AIP+++F+ +P L A+++ L ++ + + L ++
Sbjct: 380 FHGISLTSFIANLFAIPLVTFITVPLILAAMVMHLSGPLIVEQGVWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + +++ +
Sbjct: 438 GLKSLPEGWINIAERWQW---LTFSPWFLLVVWRLNAWRALPAMCVAGGLLMCWPLWQKP 494
Query: 220 SPD--------------LLISEKGNLV 232
PD ++I+ G +
Sbjct: 495 RPDAWQVYMLDVGQGLAMVIARNGKAI 521
>gi|254498826|ref|ZP_05111536.1| DNA uptake/competence protein ComA [Legionella drancourtii LLAP12]
gi|254351957|gb|EET10782.1| DNA uptake/competence protein ComA [Legionella drancourtii LLAP12]
Length = 709
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ + + G +AN+LAIP++SF+++P LI +L+ S + ++W + ++
Sbjct: 341 PLTLYWYSYGSINGFLANLLAIPLVSFLIVPLALITMLVSSYSWAWLLMKPLSWFIALLF 400
Query: 158 HIAHRI---SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR 198
+ H + + E+ I + E + + ++ R
Sbjct: 401 NGLHWTEHLAALNLEWSIQSM-ELVLALMGALLMWILLPINPFR 443
>gi|218438571|ref|YP_002376900.1| ComEC/Rec2-related protein [Cyanothece sp. PCC 7424]
gi|218171299|gb|ACK70032.1| ComEC/Rec2-related protein [Cyanothece sp. PCC 7424]
Length = 734
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 61/185 (32%), Gaps = 28/185 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F S + I + + W L I S
Sbjct: 359 GFQLSFLSTFGLI------------VTAPWLEKKLDW-------LPPLITFIITIPIAAS 399
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA--ILLMILSLDNIPFGVMAW 151
L+ F + Y + NI+ P++ + + + A LL L I V+ +
Sbjct: 400 IWTLPLLMHTFSTVATYSIPCNIITAPLVMLISLGGMISAGVALLFPLGGSAIA-WVLDY 458
Query: 152 GLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR---HIGSIMIGI 207
++I IA + + + + +G++P I +L+ G + +
Sbjct: 459 PTQMLIAIASFVVHLPGSSYAVGKLPVGMMGLIY--GVLLAIWLNQWCQKHWQGISLFLV 516
Query: 208 TIIIL 212
T++++
Sbjct: 517 TVVVV 521
>gi|91784232|ref|YP_559438.1| ComEC/Rec2-related protein [Burkholderia xenovorans LB400]
gi|91688186|gb|ABE31386.1| ComEC/Rec2-related protein [Burkholderia xenovorans LB400]
Length = 801
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 53/147 (36%), Gaps = 5/147 (3%)
Query: 61 SSESHNTWTWKKISSIKQSFLNEIR--ANIGTYGSASASIFLIKHFHCIPVYGLIANILA 118
S + + +R A++ + + + + F IP+ G +AN A
Sbjct: 351 EPSSPLPRLRAGLLRHVRGVGERLRSAAHVQFAVTVALAPLTVYWFAQIPLIGPLANAFA 410
Query: 119 IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPE 177
IP +S +V PA ++A + + LD + V L+ + S + + +
Sbjct: 411 IPWVSLLVTPA-ILAGVALPAPLDVHAWHVAHALLEWLAAGLLWFSGPPWLLWRLPQPDA 469
Query: 178 TSFVTIVVEFLLMVFCKTN-IRHIGSI 203
+ + L + + +R +
Sbjct: 470 WTLAAAALGVLWCLAPRGWPLRWAAPL 496
>gi|228923078|ref|ZP_04086370.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228836576|gb|EEM81925.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 659
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
I ++ L+ HF Y ++ N+L +P LS +V+P +I +L M + L
Sbjct: 244 ISIISQLVSTPILLYHFGYFSPYSILLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKEF 303
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTN 196
+++ GL + +++ S+ + G+ P + +++ +
Sbjct: 304 ADILSIGLSMSNDFLSYCESLPFTQLIFGKTPFNLVAVYCASIVSILMVWERR 356
>gi|258645988|ref|ZP_05733457.1| putative DNA internalization-related competence protein ComEC/Rec2
[Dialister invisus DSM 15470]
gi|260403359|gb|EEW96906.1| putative DNA internalization-related competence protein ComEC/Rec2
[Dialister invisus DSM 15470]
Length = 766
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/221 (18%), Positives = 76/221 (34%), Gaps = 38/221 (17%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRAN--IGTY 91
LFD +F + I FY + ++ I + T
Sbjct: 347 LFDISFQLSVCASAGILLFYEPL--------------RHALALLGKIPPRICEGCALSTA 392
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA---GLIAILLMILSLDNIPFGV 148
++ +FH P+Y + AN++ +P+L +V+I L + LLM L+
Sbjct: 393 AQILVLPIILYNFHSFPLYFIPANLIVVPLLEWVIIGGLLAALSSFLLMPLA--GGILQF 450
Query: 149 MAWGLDIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR----HIGSI 203
+ L + + I S+ F G + + + + F + R + I
Sbjct: 451 ADYFLWAALRLNGFISSLPEASFEAGSLSLAEGILYYIGVAVFCFKRKWERKGQYLLAGI 510
Query: 204 MIGITIIILFTFPYSF-----SPDL-------LISEKGNLV 232
+ I++L + +PDL LIS +V
Sbjct: 511 IFAGAILLLAEWAARRETVLLAPDLGVDTGTVLISGDAKIV 551
>gi|331019172|gb|EGH99228.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. lachrymans str. M302278PT]
Length = 734
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISV 165
I + G AN+LA+P +S +V+P LI LL+ + + + L + ++
Sbjct: 372 ISLSGPFANLLAVPWVSVIVLPPALIGTLLLPVPVVGEGLLWLAGGALQWLFVFLGWVAE 431
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
A + +P +++ ++ +++ K
Sbjct: 432 ALPAWLPSAVPGWAWLLSLLGAFVLLLPKG 461
Score = 39.8 bits (91), Expect = 0.76, Method: Composition-based stats.
Identities = 31/250 (12%), Positives = 79/250 (31%), Gaps = 12/250 (4%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+L P G P FD+ + I A G ++ + + +++
Sbjct: 120 GERWRLAVKLKRPGGLVNPDAFDYQAWLLAQRIGATGTVVDGRRLAPAHAAWRDGIRQRL 179
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
++ A + + + + G + ++L I ++ + A
Sbjct: 180 LAVDAQGREGGLAALVLGDGSG---LSSGDWQVLQDTGTV-HLLVISGQHIGLLAGVIYA 235
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
++ L A I+ G ++V +L+
Sbjct: 236 LVA---GLARWGLWPRALPWLPSACALAFIAALGYGLLAGFEVPVRRACVMVGMVLL--W 290
Query: 194 KTNIRHIGSI---MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
+ RH+G + +I +++ + P +S + ++ + + ++S S+
Sbjct: 291 RLRFRHLGVVWPFLISFNAVLIVEPLVTLQPGFWLSFAVVGILVLIFSGRLGSWSWWQSW 350
Query: 251 IFSQWKSALI 260
+QW A+
Sbjct: 351 TRAQWLIAIG 360
>gi|301382841|ref|ZP_07231259.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. tomato Max13]
gi|302062853|ref|ZP_07254394.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. tomato K40]
gi|302131670|ref|ZP_07257660.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. tomato NCPPB 1108]
Length = 734
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISV 165
I + G AN+LA+P +S +V+P LI LL+ + + + L + ++
Sbjct: 372 ISLSGPFANLLAVPWVSVIVLPPALIGTLLLPVPVVGEGLLWLAGGALQWLFVFLGWVAE 431
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
A + +P +++ ++ +++ K
Sbjct: 432 ALPAWLPSAVPGWAWLLSLLGAFVLLLPKG 461
Score = 39.8 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 29/245 (11%), Positives = 76/245 (31%), Gaps = 12/245 (4%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+L P G P FD+ + I A G ++ + + +++
Sbjct: 120 GERWRLAVKLKRPGGLVNPDAFDYQAWLLAQRIGATGTVVDGRRLAPAHAAWRDGIRQRL 179
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
++ A + + + + G + ++L I ++ + A
Sbjct: 180 LAVDAQGREGGLAALVLGDGSG---LSSGDWQVLQDTGTV-HLLVISGQHIGLLAGVIYA 235
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
++ L A I+ G ++V +L+
Sbjct: 236 LVA---GLARWGLWPRALPWLPSACALAFIAALGYGLLAGFEVPVRRACVMVGMVLL--W 290
Query: 194 KTNIRHIGSI---MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
+ RH+G + ++ +++ + P +S + ++ + + +S S+
Sbjct: 291 RLRFRHLGVVWPFLLSFNAVLIVEPLVTLQPGFWLSFAAVGILVLIFSGRLGTWSWWQSW 350
Query: 251 IFSQW 255
+QW
Sbjct: 351 TRAQW 355
>gi|213969765|ref|ZP_03397900.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. tomato T1]
gi|213925573|gb|EEB59133.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. tomato T1]
Length = 738
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISV 165
I + G AN+LA+P +S +V+P LI LL+ + + + L + ++
Sbjct: 376 ISLSGPFANLLAVPWVSVIVLPPALIGTLLLPVPVVGEGLLWLAGGALQWLFVFLGWVAE 435
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
A + +P +++ ++ +++ K
Sbjct: 436 ALPAWLPSAVPGWAWLLSLLGAFVLLLPKG 465
Score = 39.8 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 29/245 (11%), Positives = 76/245 (31%), Gaps = 12/245 (4%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+L P G P FD+ + I A G ++ + + +++
Sbjct: 124 GERWRLAVKLKRPGGLVNPDAFDYQAWLLAQRIGATGTVVDGRRLAPAHAAWRDGIRQRL 183
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
++ A + + + + G + ++L I ++ + A
Sbjct: 184 LAVDAQGREGGLAALVLGDGSG---LSSGDWQVLQDTGTV-HLLVISGQHIGLLAGVIYA 239
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
++ L A I+ G ++V +L+
Sbjct: 240 LVA---GLARWGLWPRALPWLPSACALAFIAALGYGLLAGFEVPVRRACVMVGMVLL--W 294
Query: 194 KTNIRHIGSI---MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
+ RH+G + ++ +++ + P +S + ++ + + +S S+
Sbjct: 295 RLRFRHLGVVWPFLLSFNAVLIVEPLVTLQPGFWLSFAAVGILVLIFSGRLGTWSWWQSW 354
Query: 251 IFSQW 255
+QW
Sbjct: 355 TRAQW 359
>gi|28871001|ref|NP_793620.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. tomato str. DC3000]
gi|28854250|gb|AAO57315.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. tomato str. DC3000]
Length = 738
Score = 54.4 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/90 (20%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISV 165
I + G AN+LA+P +S +V+P LI LL+ + + + L + ++
Sbjct: 376 ISLSGPFANLLAVPWVSVIVLPPALIGTLLLPVPVVGEGLLWLAGGALQWLFVFLGWVAE 435
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
A + +P +++ ++ +++ K
Sbjct: 436 ALPAWLPSAVPGWAWLLSLLGAFVLLLPKG 465
Score = 41.7 bits (96), Expect = 0.20, Method: Composition-based stats.
Identities = 31/250 (12%), Positives = 79/250 (31%), Gaps = 12/250 (4%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+L P G P FD+ + I A G ++ + + +++
Sbjct: 124 GERWRLAVKLKRPGGLVNPDAFDYQAWLLAQRIGATGTVVDGRRLAPAHAAWRDGIRQRL 183
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
++ A + + + + G + ++L I ++ + A
Sbjct: 184 LAVDAQGREGGLAALVLGDGSG---LSSGDWQVLQDTGTV-HLLVISGQHIGLLAGVIYA 239
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
++ L A I+ G ++V +L+
Sbjct: 240 LVA---GLARWGLWPRALPWLPSACALAFIAALGYGLLAGFEVPVRRACVMVGMVLL--W 294
Query: 194 KTNIRHIGSI---MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
+ RH+G + +I +++ + P +S + ++ + + ++S S+
Sbjct: 295 RLRFRHLGVVWPFLISFNAVLIVEPLVTLQPGFWLSFAAVGILVLIFSGRLGSWSWWQSW 354
Query: 251 IFSQWKSALI 260
+QW A+
Sbjct: 355 TRAQWLIAIG 364
>gi|299822873|ref|ZP_07054759.1| competence protein EC [Listeria grayi DSM 20601]
gi|299816402|gb|EFI83640.1| competence protein EC [Listeria grayi DSM 20601]
Length = 714
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 57/166 (34%), Gaps = 12/166 (7%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ HF+ I G+ N++ +P+ F V+P ++ I ++ P + +
Sbjct: 336 PIVCYHFYQISWTGIFLNLIYVPLFVFFVLPLSFLSFCFPIAAVYGNPLLL------FME 389
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEF--LLMVFCKTNIRHIGSIMIGITIIILFTF 215
I H + + I P S + ++ L + + +I + +++L +
Sbjct: 390 KITHYLGSIPYQVLITGRPHPSLIIAILALIYLFFLLWENRKTSRYICLIAVFVLLLLSK 449
Query: 216 PYSFSPDLLIS---EKGNLVALVDKNTLISNYSNPP-SFIFSQWKS 257
I L+ L + + +F +W+
Sbjct: 450 SNWIGKVTFIDIGQGDSILIQLPNNKGNYLIDTGGQMAFQQEKWQK 495
>gi|170769259|ref|ZP_02903712.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia albertii TW07627]
gi|170121911|gb|EDS90842.1| DNA internalization-related competence protein ComEC/Rec2
[Escherichia albertii TW07627]
Length = 754
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 52/123 (42%), Gaps = 9/123 (7%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAI---LLMILSLDNIPFGVMAWGLDIIIHIA 160
FH I + +AN+ AIP+++F+ +P L A+ L + ++ + + L ++
Sbjct: 380 FHGISLTSFLANLFAIPLVTFISVPLILAAMIVHLSGPIIVEQWLWLIADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSF 219
++ + I E +LL++ + R + ++ + I++ +
Sbjct: 438 ---ALKNLPEGWINIAERWQWLSFSPWLLLIIWRFNAWRTLPAVCLAGGIMMCWPLWQKP 494
Query: 220 SPD 222
PD
Sbjct: 495 RPD 497
>gi|307151952|ref|YP_003887336.1| ComEC/Rec2-like protein [Cyanothece sp. PCC 7822]
gi|306982180|gb|ADN14061.1| ComEC/Rec2-related protein [Cyanothece sp. PCC 7822]
Length = 732
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/226 (15%), Positives = 80/226 (35%), Gaps = 40/226 (17%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + + I ++P + E + IS + I S
Sbjct: 361 GFQLSFLATFSLI------VTVPPL----EQKLDFLPPTISPM---------IAIPIGVS 401
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA--ILLMILSLDNIPFGVMAW 151
L++ F + Y ++ NI+ P+++ + + L A LL L I ++ +
Sbjct: 402 VWTLPLLMQSFSVVATYSILCNIITAPLVTVISLGGMLSAAVALLFPLGGSAIA-WLLYY 460
Query: 152 GLDIIIHIAH-RISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR----------HI 200
++I IA +++ + + +G++ V I V + +
Sbjct: 461 PTLLLIAIAKFFVNLPASSYAVGKLSVGVMVLIYVGL--LAIWLNRWCQKHGKVISLFLL 518
Query: 201 GSIMIGITIIILFTFPYSF---SP--DLLISEKGNLVALVDKNTLI 241
+++ I I L + P ++I ++G ++ + +
Sbjct: 519 TVVVVPIVISRLTLVQITVLETQPHLSIVIQDRGRVMVINGGDEAA 564
>gi|238749768|ref|ZP_04611273.1| hypothetical protein yrohd0001_30880 [Yersinia rohdei ATCC 43380]
gi|238712423|gb|EEQ04636.1| hypothetical protein yrohd0001_30880 [Yersinia rohdei ATCC 43380]
Length = 720
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 49/119 (41%), Gaps = 6/119 (5%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
FH I +Y + AN+ A+P++S + +P L+A++ M+L W L + A +
Sbjct: 346 FHGISLYSIPANLWAVPLVSLITVPCVLLALIFMLL----PAIASAFWFLADMSLTAVFL 401
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
+ + S +L M+ + + IG+ ++ + ++ D
Sbjct: 402 PLNYLSAGWLYTGSASVALGYGGWLAMLIW--RFQWWRNYPIGVMVLCINLALFTQRRD 458
>gi|221314806|ref|ZP_03596611.1| putative integral membrane protein [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221324006|ref|ZP_03605300.1| putative integral membrane protein [Bacillus subtilis subsp.
subtilis str. SMY]
Length = 767
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 50/137 (36%), Gaps = 4/137 (2%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
+ + L+ HFH + + N+L +P +F ++P + +LL+ LS
Sbjct: 349 VSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGAVAGVLLLSLSASFGRLF 408
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRI---PETSFVTIVVEFLLMVFCKTNIRHIGSIM 204
+W +I I I+ + + P + + ++++ R + +M
Sbjct: 409 F-SWFDLLISWINRLITNIADVDVFTIMIAHPAPVLLFLFTVTIILLLMAIEKRSLSQLM 467
Query: 205 IGITIIILFTFPYSFSP 221
+ I F P
Sbjct: 468 VTGGICCTVMFLLFIYP 484
>gi|170077449|ref|YP_001734087.1| competence protein [Synechococcus sp. PCC 7002]
gi|169885118|gb|ACA98831.1| competence protein [Synechococcus sp. PCC 7002]
Length = 730
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 50/138 (36%), Gaps = 8/138 (5%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV---IPAGLIAILLMILSLDN 143
I S L F+ I Y + +I+ P++ V + +G + +L+ L
Sbjct: 389 AIPMAASIWTLPLLAYKFNVIATYSIPTSIVLSPVIGLVSLGGMVSGAVGLLIPELG--G 446
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFC-IGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
+ W L +I + ++ + +P +V ++++ ++ +
Sbjct: 447 AIAYGLGWPLRGMIWLVEQVVALPGSQASVAALPLPQL--LVFYGVMLLIWRSPWAQKQA 504
Query: 203 IMIGITIIILFTFPYSFS 220
+ ++ILF +
Sbjct: 505 RPLIGGLLILFVTVLVYR 522
>gi|16079611|ref|NP_390435.1| DNA channel for uptake in competent cells [Bacillus subtilis subsp.
subtilis str. 168]
gi|221310482|ref|ZP_03592329.1| putative integral membrane protein [Bacillus subtilis subsp.
subtilis str. 168]
gi|221319728|ref|ZP_03601022.1| putative integral membrane protein [Bacillus subtilis subsp.
subtilis str. JH642]
gi|33518612|sp|P39695|COMEC_BACSU RecName: Full=ComE operon protein 3
gi|1303798|dbj|BAA12454.1| ComEC [Bacillus subtilis]
gi|2635003|emb|CAB14499.1| DNA channel for uptake in competent cells [Bacillus subtilis subsp.
subtilis str. 168]
Length = 776
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 50/137 (36%), Gaps = 4/137 (2%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
+ + L+ HFH + + N+L +P +F ++P + +LL+ LS
Sbjct: 358 VSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGAVAGVLLLSLSASFGRLF 417
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRI---PETSFVTIVVEFLLMVFCKTNIRHIGSIM 204
+W +I I I+ + + P + + ++++ R + +M
Sbjct: 418 F-SWFDLLISWINRLITNIADVDVFTIMIAHPAPVLLFLFTVTIILLLMAIEKRSLSQLM 476
Query: 205 IGITIIILFTFPYSFSP 221
+ I F P
Sbjct: 477 VTGGICCTVMFLLFIYP 493
>gi|50121482|ref|YP_050649.1| hypothetical protein ECA2558 [Pectobacterium atrosepticum SCRI1043]
gi|49612008|emb|CAG75457.1| putative competence-related protein [Pectobacterium atrosepticum
SCRI1043]
Length = 757
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 77/197 (39%), Gaps = 15/197 (7%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIP 145
++ T + + FH + L AN+ A+P++SFV P L+A+ + + L I
Sbjct: 369 HLQTGITLLLMPLQLHIFHGFSIISLPANLWAVPLVSFVTTPLILLALTTIGFAPLSEIL 428
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK-TNIRHIGSIM 204
+ + L ++ +++ + + + + + + +V + + R + +
Sbjct: 429 WWLADISLRVV-----FAPLSYLQTGWIYLDASLLLGSIAGWGAVVIWRFSWWRIYPASI 483
Query: 205 IGITIIILFTFPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALIT 261
+ +++L S +PD ++ L ++++ Y W+ +
Sbjct: 484 GALILVLLVFRTKSDAPDWRVDMLDVGHGLAIVIEQRGKAVLYDTGNR-----WEGGDMA 538
Query: 262 PFHEAPHVQKEDLQEKN 278
P+++ + +N
Sbjct: 539 MREILPYLRWRGVDVEN 555
>gi|221198416|ref|ZP_03571462.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia multivorans CGD2M]
gi|221208907|ref|ZP_03581904.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia multivorans CGD2]
gi|221171190|gb|EEE03640.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia multivorans CGD2]
gi|221182348|gb|EEE14749.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia multivorans CGD2M]
Length = 818
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 68/176 (38%), Gaps = 9/176 (5%)
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
WT + + + + A + + + F I + G + N LAIP +SFVV
Sbjct: 406 GWTMRALHRLADA------ARVQYAVTIGLAPLTAAWFAQISLSGPLGNALAIPWVSFVV 459
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV-V 185
P ++A L++ LD + L+ ++ + R++ R+P+ + + V
Sbjct: 460 TP-TVLAGLVLPAPLDAAMLRLAHASLEPMMALLARLAAWPAGVMWLRMPDAPVLVLACV 518
Query: 186 EFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ M+ + +R + + P + L + + G +++ +
Sbjct: 519 GVVWMLMPRGWPLRWAAPLTWLPLVAPAPDAPPIGAFRLTVLDVGQGTSVLVETAR 574
>gi|222110147|ref|YP_002552411.1| DNA internalization-like competence protein comec/rec2 [Acidovorax
ebreus TPSY]
gi|221729591|gb|ACM32411.1| DNA internalization-related competence protein ComEC/Rec2
[Acidovorax ebreus TPSY]
Length = 861
Score = 54.0 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 56/139 (40%), Gaps = 8/139 (5%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F + + GL+AN++AIP + VV P L+ +L L + AW + + + +
Sbjct: 472 FGQVALVGLLANLVAIPWTTLVVTPLALLGVLWAPL------WQAAAWCVQALSVLLQWL 525
Query: 164 SVAHNE-FCIGRIPETSFVTIVVEFLLMVF-CKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ + P+ + V +L+ +R +G ++ + P
Sbjct: 526 AAWPWAQVALPMAPQWAGAAAVTGGVLLALRLPWGVRALGLALLLPALWWQPARPQPGQF 585
Query: 222 DLLISEKGNLVALVDKNTL 240
+LL ++ G A++ +
Sbjct: 586 ELLAADVGQGQAVLVRTAR 604
>gi|15806854|ref|NP_295577.1| competence protein ComEC/Rec2 [Deinococcus radiodurans R1]
gi|6459631|gb|AAF11405.1|AE002025_4 competence protein ComEC/Rec2, putative [Deinococcus radiodurans
R1]
Length = 755
Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 66/171 (38%), Gaps = 11/171 (6%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
F ++ ++ S + + + +K + + A + T + +F +P+ G
Sbjct: 351 FLAVLGLLLSGKLADRLPQRWPQWLKLALAATVLAELATL------PVIAHNFGQLPLVG 404
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
L AN+LA PI++ +V P G +A LL + +A ++ +A A
Sbjct: 405 LPANLLAAPIMAVLV-PLGFLAGLLGPAG--GLVNWAVAPLASALLWVAQTFGSA-PVLG 460
Query: 172 IGRIPETSFVTIVVEFL-LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
G + F+ + + M + +R ++ I + L P P
Sbjct: 461 WGTLGAGGFLAYALAAVAGMGWLLGRVRGQAALTIALACAALSWLPAQLRP 511
>gi|308186259|ref|YP_003930390.1| hypothetical protein Pvag_0739 [Pantoea vagans C9-1]
gi|308056769|gb|ADO08941.1| Uncharacterized protein ycaI [Pantoea vagans C9-1]
Length = 755
Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 43/119 (36%), Gaps = 7/119 (5%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F+ I + L+AN++AIP++SF+ +P +A+LL + L +G L + +
Sbjct: 386 FNGISLTALVANVVAIPVVSFITMPLVTLAMLLPVAHLSAFFWGAADLSLRALFYCL--- 442
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
F +V ++ + + + + P+
Sbjct: 443 -TLLPPGWWPLNGTVWFTVMVWGG--LILWRAQF-FFSLPLSSCALALTMILSRQPEPE 497
>gi|220932129|ref|YP_002509037.1| DNA internalization-related competence protein ComEC/Rec2
[Halothermothrix orenii H 168]
gi|219993439|gb|ACL70042.1| DNA internalization-related competence protein ComEC/Rec2
[Halothermothrix orenii H 168]
Length = 775
Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 70/184 (38%), Gaps = 30/184 (16%)
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV---IPAG 130
S I + +L I A + +S + +F+ I G++ NI AIP+ VV +
Sbjct: 356 SGILKKYLGNIVA-VSGAALLGSSPIISYYFNIITPIGILTNIWAIPLAGLVVSMSMIGL 414
Query: 131 LIAILLMILSL------DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
++ ++ + SL ++ G+ + ++ + + + P + I
Sbjct: 415 ILGLVHPVFSLVIFRLFVYYLLRLLGTGMKFM-------ALLPFDIEVPQPPLFILLAIY 467
Query: 185 VEFLLM-VFCKTN------------IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNL 231
+ + KT ++ G ++ + ++++ + +++ + G
Sbjct: 468 SVLIYLPFLLKTRYIPYNIKRQKMKLKWAGVLVTCLIVMMVLMGIFPSQLEIIFFDVGQG 527
Query: 232 VALV 235
A++
Sbjct: 528 DAII 531
>gi|20807422|ref|NP_622593.1| hydrolase of metallo-beta-lactamase fold [Thermoanaerobacter
tengcongensis MB4]
gi|20515944|gb|AAM24197.1| predicted hydrolases of metallo-beta-lactamase fold
[Thermoanaerobacter tengcongensis MB4]
Length = 759
Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 40/230 (17%), Positives = 85/230 (36%), Gaps = 26/230 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F + AI YFY + +K S +K + A IGT
Sbjct: 320 LWDVGFQLSFVATLAILYFY---------RPIDERLFKLPSYLKGIIALNLSAQIGTI-- 368
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG- 152
F++ +FH I ++NI +P+++ +I + L A L + ++ +
Sbjct: 369 ----PFVMYYFHYISFVSFLSNIAIVPLVNIAIILSFLSAFLGFVFPTASVFVNYINIPF 424
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRH----IGSIMIGIT 208
++++ + IP + IV+ ++++ + I + +
Sbjct: 425 IELLFKVTSFFEKFPYASVNVFIP--PVIVIVLYYIVLGILISRIELRKKKLAVAASFMV 482
Query: 209 IIILFTFPYSFSPDLLIS----EKGNLVALVDKNTLISNYSNPPSFIFSQ 254
I +LF + Y DL ++ +G+ + + + +FS
Sbjct: 483 IALLFFWNYFVPKDLEVTFLDVGQGDATFVRTPHGRAFLIDGGGNPVFSN 532
>gi|332091784|gb|EGI96863.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
dysenteriae 155-74]
Length = 398
Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 53/123 (43%), Gaps = 9/123 (7%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 250 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW-- 307
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
+ I E + L+V + N R + ++ + + +++ +
Sbjct: 308 ---GLKSLPEGWINIAERWQWLSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKP 364
Query: 220 SPD 222
PD
Sbjct: 365 RPD 367
>gi|253688155|ref|YP_003017345.1| DNA internalization-related competence protein ComEC/Rec2
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|251754733|gb|ACT12809.1| DNA internalization-related competence protein ComEC/Rec2
[Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 763
Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 54/143 (37%), Gaps = 8/143 (5%)
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
++ + ++ T + + FH + L AN+ A+P++SFV P L+A+
Sbjct: 365 RRRWFWLRWIHLQTGITLLLMPLQLHIFHGFSITSLPANLWAVPLVSFVTTPLILLALST 424
Query: 137 MIL-SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
M L + + + L ++ + + + + + + V + +V
Sbjct: 425 MAFVPLGEMLWWLADISLRVV-----FAPLTYLQTGWIYLDASLLLGSVAGWGAVVIW-- 477
Query: 196 NIRHIGSIMIGITIIILFTFPYS 218
R + I ++IL +
Sbjct: 478 RFRWWRIHPMSIGVLILVLLAFR 500
>gi|220909204|ref|YP_002484515.1| ComEC/Rec2-like protein [Cyanothece sp. PCC 7425]
gi|219865815|gb|ACL46154.1| ComEC/Rec2-related protein [Cyanothece sp. PCC 7425]
Length = 769
Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 69/191 (36%), Gaps = 26/191 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F + I + P + + +S + L + +
Sbjct: 365 GFQFSFLATLGLI------VTAPPIAKRLDWLPANLATLMSVPLAATLWVLPIQLAV--- 415
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL--IAILLMILSLDNIPFGVMAW 151
F P YGL+ANI+ +L + I + +A L+ L L +M +
Sbjct: 416 ----------FGVFPPYGLLANIVTTFLLEVITIGGFISGLAALIWPL-LGTGIAWLMYY 464
Query: 152 GLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTI--VVEFLLMV-FCKTNIRHIGSIMIGI 207
+++ I H S + + IG I ++I ++ + ++ + + + I +G+
Sbjct: 465 PTALLLWIVHFFSRLPGSSLAIGAIAAWQVLSIYGLIFAVWLIPWWQRRWKLASGIAVGL 524
Query: 208 TIIILFTFPYS 218
++ +
Sbjct: 525 IVVPFLQLQTA 535
>gi|109898099|ref|YP_661354.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudoalteromonas atlantica T6c]
gi|109700380|gb|ABG40300.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudoalteromonas atlantica T6c]
Length = 762
Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Query: 100 LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI--PFGVMAWGLDIII 157
+ F + V + N++A+P+++ +++P L+ +++M+LS+ F ++ GL ++
Sbjct: 391 VAWQFSFVSVVSPVINLVAVPVVTLIIVPMCLLGVIMMLLSIPYWKHVFTLVDVGLQFLL 450
Query: 158 -HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
++ S + F I IP +V + L + + I + ++++ I ++ P
Sbjct: 451 DKLSLMESWSGAAFSIQAIPGIVWVCFTIAALTFLLPRGLIPRLLALVLCIPLLTFGLTP 510
Query: 217 YSFSPDLLISEKGNLVALV 235
+ + + G +++V
Sbjct: 511 AKRDWQINVLDVGQGLSVV 529
>gi|226311586|ref|YP_002771480.1| hypothetical protein BBR47_19990 [Brevibacillus brevis NBRC 100599]
gi|226094534|dbj|BAH42976.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC
100599]
Length = 800
Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 53/147 (36%), Gaps = 2/147 (1%)
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
++ + + FLI HFH + N++ PILS + +P G IA++
Sbjct: 378 VRVPVWIRTLLAVTLSAQLVSFPFLIYHFHLFSPVSWLVNLVVTPILSAIALPFGYIAVV 437
Query: 136 LMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
L + L IP + L I I F P ++ + FL +
Sbjct: 438 LDFVHPFLAVIPVWLSTAMLKWIHLPLFAIEKMRLPFTYWPHPSWWWLALYTCFLGALPI 497
Query: 194 KTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I +T +I +F +
Sbjct: 498 SWRLGYHRKRDIMLTFVIFLSFIVAAR 524
>gi|46143198|ref|ZP_00135692.2| COG2333: Predicted hydrolase (metallo-beta-lactamase superfamily)
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
Length = 193
Score = 53.6 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 53/123 (43%), Gaps = 9/123 (7%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 8 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW-- 65
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + +++ +
Sbjct: 66 GLKSLPEGWINIAECWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKP 122
Query: 220 SPD 222
PD
Sbjct: 123 RPD 125
>gi|229192538|ref|ZP_04319499.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus ATCC 10876]
gi|228590845|gb|EEK48703.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus ATCC 10876]
Length = 659
Score = 53.6 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
I ++ L+ HF Y + N+L +P LS +V+P +I +L M + L
Sbjct: 244 ISIISQLVSTPILLYHFGYFSPYSSLLNLLYVPFLSIIVLPCSIIILLCMPIVPFLAKGF 303
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTN 196
V++ GL + +++ S+ + G P + +++ +
Sbjct: 304 ADVLSIGLSMSNDFLSYCESLPFTQLIFGETPFNLVAVYCASIVSILMVWERR 356
>gi|255264815|ref|ZP_05344157.1| competence protein [Thalassiobium sp. R2A62]
gi|255107150|gb|EET49824.1| competence protein [Thalassiobium sp. R2A62]
Length = 254
Score = 53.3 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 48/122 (39%), Gaps = 9/122 (7%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + LSPP+GP PG FDF ++++ + A+GY + ++ +
Sbjct: 133 PLELGLHVMTTGHLSPPAGPPEPGRFDFRRMAWFERLGAVGYTRA--PVLAAGPDAPDGA 190
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-------IANILAIPIL 122
+ I++ ++ IG A A+ + L +A++LAI L
Sbjct: 191 GLWVYKIRRQLSLTVQDQIGGEVGAFAAAITTGDRSGMGQQTLSALRRSNLAHLLAISGL 250
Query: 123 SF 124
Sbjct: 251 HM 252
>gi|270261194|ref|ZP_06189467.1| hypothetical protein SOD_a04190 [Serratia odorifera 4Rx13]
gi|270044678|gb|EFA17769.1| hypothetical protein SOD_a04190 [Serratia odorifera 4Rx13]
Length = 773
Score = 53.3 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/225 (13%), Positives = 74/225 (32%), Gaps = 31/225 (13%)
Query: 58 MIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANIL 117
M S+ + W W + + +I + F + + + AN+
Sbjct: 366 MPLSARFRSAWYWAPVRWL----------HIQFGITLLLVPMQAALFLGLTLTSMPANLW 415
Query: 118 AIPILSFVVIPAGLIAIL--LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI 175
A+P++S V +P LIA++ + L L + + L + + + + +
Sbjct: 416 AVPVVSLVTVPLILIAVICGALPL-LSGGFWWLADLTLLWV-----FTPLHYLQRGWVDL 469
Query: 176 PETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP-----DLLISEKGN 230
S + +LL+++ + + + I + P D+L G
Sbjct: 470 GAASLLVSAAGWLLVIYWRFHWWLCYPAGLAAVAICCVLWREKEPPYRWRVDMLDVGHGL 529
Query: 231 LVAL-VDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDL 274
V + + ++ + +W + H P + +
Sbjct: 530 AVVIERNGKGILFDTG-------DRWATGSAAERHILPMLNWRGI 567
>gi|289262|gb|AAC36907.1| comE ORF3 [Bacillus subtilis]
Length = 776
Score = 53.3 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 50/137 (36%), Gaps = 4/137 (2%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
+ + L+ HFH + + N+L +P +F ++P + +LL+ LS
Sbjct: 358 VSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGAVAGVLLLSLSASFGRLF 417
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRI---PETSFVTIVVEFLLMVFCKTNIRHIGSIM 204
+W +I I I+ + + P + + ++++ R + +M
Sbjct: 418 F-SWFDLLISWINRLITNIADVDVFTIMIAHPAPILLFLFTVTIILLLMAIEKRSLSQLM 476
Query: 205 IGITIIILFTFPYSFSP 221
+ I F P
Sbjct: 477 VTGGICCTVMFLLFIYP 493
>gi|92117258|ref|YP_576987.1| ComEC/Rec2-related protein [Nitrobacter hamburgensis X14]
gi|91800152|gb|ABE62527.1| ComEC/Rec2-related protein [Nitrobacter hamburgensis X14]
Length = 413
Score = 53.3 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 42/110 (38%), Gaps = 3/110 (2%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
LS+ K P + +E ARL PP P PG +DF Y++GI A G+ K++
Sbjct: 177 LSVKKGTAP-AVGSFVELKARLQPPLTPLRPGSYDFARDMYFQGIGASGFVMGAIKIVNP 235
Query: 62 SESHNTWTW--KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV 109
+ ++ + IR + A A+ L I
Sbjct: 236 PRGGGIALRYAALMQEMRDAIDARIRLVLSGDSRAIATALLTGRRDAITT 285
>gi|229163270|ref|ZP_04291225.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus R309803]
gi|228620333|gb|EEK77204.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus R309803]
Length = 693
Score = 53.3 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 50/132 (37%), Gaps = 26/132 (19%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL------SL 141
I ++ L+ HF Y ++ N+L +P LS +V+P +I ++ M + L
Sbjct: 278 ISIISQLVSTPILLYHFGYFSPYSILLNLLYVPFLSIIVLPCSIIILICMPIVPFLAKGL 337
Query: 142 ------------------DNIPFGVMAWGLDIIIHIAHRISVAHNEFCI--GRIPETSFV 181
++ PF + +G I+ +A + + + + +
Sbjct: 338 ANVLSMGLSISNDFLSYCESFPFTRLVFGQTSILLVAVYFVIIVSILIVWERGMSKRVVS 397
Query: 182 TIVVEFLLMVFC 193
+V FL + C
Sbjct: 398 IVVGGFLFVCTC 409
>gi|134095374|ref|YP_001100449.1| putative DNA internalization-related competence protein ComEC/Rec2
(partial) [Herminiimonas arsenicoxydans]
gi|133739277|emb|CAL62326.1| Putative competence protein [Herminiimonas arsenicoxydans]
Length = 552
Score = 52.9 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 62/202 (30%), Gaps = 18/202 (8%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQ 78
G+ L P PG F + ++ I Y W S+
Sbjct: 105 GLVVLFDPWAVLGPG-----FWLSFAAVAVILYVSVGRAAANGDAGKLRWRAALQSA--- 156
Query: 79 SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI 138
+ + F + +AN +AIP+ SF+V P L+ +L
Sbjct: 157 -------TLTQYAVTLGLVPLTVLLFGQASLVSPLANAVAIPLFSFLVTPLALLGSVL-P 208
Query: 139 LSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP-ETSFVTIVVEFLLMVFCKTN- 196
L G + + + + + +S IP F ++ + M+ +
Sbjct: 209 APLSFWCLGFAHFLVAELAQVLNWLSGFSLAVWTVPIPDAWMFALALIGTIWMLAPRGWP 268
Query: 197 IRHIGSIMIGITIIILFTFPYS 218
R++G ++ P +
Sbjct: 269 ARYLGLFAWLPLVLNAPAHPRA 290
>gi|326942108|gb|AEA18004.1| ComE operon protein 3 [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 773
Score = 52.9 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
I ++ L+ HF Y + N+L +P LS +V+P +I +L M + L
Sbjct: 358 ISIISQLVSTPILLYHFGYFSPYSIFLNLLYVPFLSTIVLPCSIIILLCMPIVPFLAKGF 417
Query: 146 FGVMAWGLDII-IHIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTN 196
V++ GL + + +++ S+ N+ G+ + +++ +
Sbjct: 418 ADVLSIGLSMSNVFLSYCESLPFNQLIFGKTSFNLVAVYCASIVSILMVWERR 470
>gi|228941492|ref|ZP_04104042.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228974422|ref|ZP_04134990.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228981017|ref|ZP_04141319.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis Bt407]
gi|228778677|gb|EEM26942.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis Bt407]
gi|228785258|gb|EEM33269.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228818142|gb|EEM64217.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar berliner ATCC 10792]
Length = 659
Score = 52.9 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
I ++ L+ HF Y + N+L +P LS +V+P +I +L M + L
Sbjct: 244 ISIISQLVSTPILLYHFGYFSPYSIFLNLLYVPFLSTIVLPCSIIILLCMPIVPFLAKGF 303
Query: 146 FGVMAWGLDII-IHIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTN 196
V++ GL + + +++ S+ N+ G+ + +++ +
Sbjct: 304 ADVLSIGLSMSNVFLSYCESLPFNQLIFGKTSFNLVAVYCASIVSILMVWERR 356
>gi|325297465|ref|YP_004257382.1| ComEC/Rec2-like protein [Bacteroides salanitronis DSM 18170]
gi|324317018|gb|ADY34909.1| ComEC/Rec2-related protein [Bacteroides salanitronis DSM 18170]
Length = 659
Score = 52.9 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 67/186 (36%), Gaps = 24/186 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + + + I ++ + W WK ++ + L +
Sbjct: 360 SFQLSFVAVLSLLLIYPF---IERLFHFRWKPLNWLWKSMALTMAAQLGTL--------- 407
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
F++ +F P Y L+AN++ P+ ++ +A++ ++ V+ +
Sbjct: 408 ----PFILCYFGTFPTYFLLANLVVTPLSIVIL----GLALVCLLFGAVPWLVKVLGLSV 459
Query: 154 DIIIHIAHRISVAHN----EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITI 209
+++ I + + + F ++ FLL + ++ R IG +
Sbjct: 460 ELLNGIMEWVQGLSGSQITSVYLSPVQAGVFALSLISFLLYLSRRSARRLIGVLCCTNLF 519
Query: 210 IILFTF 215
+ + F
Sbjct: 520 LGMLLF 525
>gi|321312042|ref|YP_004204329.1| DNA channel for uptake in competent cells [Bacillus subtilis BSn5]
gi|320018316|gb|ADV93302.1| DNA channel for uptake in competent cells [Bacillus subtilis BSn5]
Length = 775
Score = 52.9 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 48/136 (35%), Gaps = 2/136 (1%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
+ + L+ HFH + + N+L +P +F ++P + +LL+ L S +
Sbjct: 357 VSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGAVAGVLLLSLSASFGRLF 416
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
F + + I+ + P + + ++++ R + +MI
Sbjct: 417 FSWFDLLISWTNRLITNIADVDVFTIMIAHPAPVLLFLFTVAIILLLMAIEKRSLSQLMI 476
Query: 206 GITIIILFTFPYSFSP 221
I F P
Sbjct: 477 TGGICCTVMFLLFIYP 492
>gi|297569040|ref|YP_003690384.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfurivibrio alkaliphilus AHT2]
gi|296924955|gb|ADH85765.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfurivibrio alkaliphilus AHT2]
Length = 854
Score = 52.9 bits (125), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 54/155 (34%), Gaps = 15/155 (9%)
Query: 32 PGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTY 91
P LF +F + + G +P + T + + + S L A +
Sbjct: 393 PALFGASFQLSFAATA--GIIMLVPSLQDRYREATTPGRRLLFWVITSLLVSAVATL--- 447
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-------LDNI 144
+ + HFH + + + +LA P++ F +P LI + L L I
Sbjct: 448 ---VTAPLAMHHFHRVSLLSPLTTLLATPLIFFWTLPLALIGLALSTFGQAGVLGWLAGI 504
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
+ GLD+ + + ++ F P +
Sbjct: 505 LLTAASRGLDLTVTMTVWLAELPGSFFYFAPPSVA 539
>gi|323526601|ref|YP_004228754.1| DNA internalization-like competence protein ComEC/Rec2
[Burkholderia sp. CCGE1001]
gi|323383603|gb|ADX55694.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia sp. CCGE1001]
Length = 964
Score = 52.9 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 50/133 (37%), Gaps = 3/133 (2%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
A++ + + + + F IP+ G +AN AIP +S +V P+ L ++L LD
Sbjct: 455 AHVQLAVTLALAPLTVYWFAQIPLIGPLANAFAIPWVSVLVTPSVLAGLVL-PAPLDAFA 513
Query: 146 FGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSI 203
+ LD ++ +S + + + + L + + +R +
Sbjct: 514 LRLAHGLLDAMMAGLQWLSGPRWALWWLPQPDGWTLAAAAAGVLWCLAPRGWPLRWAAPL 573
Query: 204 MIGITIIILFTFP 216
+ + P
Sbjct: 574 TWLPLVAAAPSGP 586
>gi|312883538|ref|ZP_07743263.1| hypothetical protein VIBC2010_12004 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368761|gb|EFP96288.1| hypothetical protein VIBC2010_12004 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 695
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDI 155
+ ++ FH I + L NIL +P SFVVIP +A L + ++ I + + LD+
Sbjct: 320 APIVVLFFHGISTFSLFLNILFVPWFSFVVIPLNFLAFLTLSFGKVNQILWSSVDASLDL 379
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
+I++ + + + IP F+ +VV ++F K + +G +I
Sbjct: 380 VIYVLNHLPQGWWDIDSELIPYFFFLPLVV-MCSLIFSKKTLGLLGITII 428
>gi|328957259|ref|YP_004374645.1| DNA channel for uptake in competent cells [Carnobacterium sp. 17-4]
gi|328673583|gb|AEB29629.1| DNA channel for uptake in competent cells [Carnobacterium sp. 17-4]
Length = 730
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 73/183 (39%), Gaps = 25/183 (13%)
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL-----------MILSL 141
+ + L HF G+ AN+L +P+ ++ ++P ++ ++ L
Sbjct: 322 TLISIPVLSFHFFEFSWIGMFANLLFVPLFTWFIMPLMILLFFSSYIFSGTLFFHFLIDL 381
Query: 142 DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHI 200
G++ W +++ I + G++P F+ + + ++ + +
Sbjct: 382 AECSLGMIEW---LVLKIRLF---PYGTIVTGKVPLMLFIVTTMVLITFLIALEQQKKRK 435
Query: 201 GSIMIGITIIILFTFPYSFSP--DLLISEKGNLVALV-----DKNTLISNYSNPPSFIFS 253
+M+ IT+ I+F +SP ++LI + G A + + + + +F
Sbjct: 436 RVLMLLITVFIVFIQYQKYSPFGEVLILDVGQGDATLIKEPFGRGVYLIDTGGALAFEKE 495
Query: 254 QWK 256
+W+
Sbjct: 496 EWQ 498
>gi|170703289|ref|ZP_02894084.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia ambifaria IOP40-10]
gi|170131799|gb|EDT00332.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia ambifaria IOP40-10]
Length = 828
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/219 (14%), Positives = 70/219 (31%), Gaps = 9/219 (4%)
Query: 30 AFPGLFDFNFSSY------YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE 83
F +F + G A+ F + + + W +I +
Sbjct: 367 VLSAGFWLSFGAVAVILMAVAGWRAVREFDGDDSAPDGAAAVDRWRRLRIGCTRAGRRIA 426
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
+ + + F I V G + N AIP +S VV P ++A + + LD
Sbjct: 427 EATRVQYAVTLGLAPLTAAWFAQISVSGPLGNAFAIPWVSSVVTPI-VLAGIGLPAPLDA 485
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV-VEFLLMVFCKTN-IRHIG 201
F + L+ ++ + ++ R+P+ + + V + + +R
Sbjct: 486 YAFRLAHAALEPMMALLRHLADWPAGVFWLRMPDWPVLVLACVGVGWALMPRGWPLRWAA 545
Query: 202 SIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ + P L + + G +++ +
Sbjct: 546 PLTWLPLVAPAPDAPLPGGFRLTVLDVGQGASVLVETAR 584
>gi|330445703|ref|ZP_08309355.1| DNA internalization-related competence protein ComEC/Rec2
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328489894|dbj|GAA03852.1| DNA internalization-related competence protein ComEC/Rec2
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 771
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 74/177 (41%), Gaps = 11/177 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIII-HIAH 161
F I +AN+ A+P +SF+ +P L+A++ + L L +I + W L I+ IA
Sbjct: 400 FGGISFAAPVANLFAVPWISFITVPFVLLAVMTLWLPILSSILWQCANWSLFPIVEGIAW 459
Query: 162 RISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ + S + IV+ L+ F + + ++ ++++ + S
Sbjct: 460 LKGAWYGLSTSYQPLLWSVIIIVLGATLLPF--KRFKWLYLSLLFLSVMGILKPSKKPSQ 517
Query: 222 -DLLISEKGNLVALVD-KNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQE 276
+++ + G+ +A++ K Y W+ ++ P ++ +++
Sbjct: 518 WQIMVLDVGHGLAVIIHKAGRAILYDTGNR-----WQENVVAESTILPVLENIGIKQ 569
>gi|238757621|ref|ZP_04618805.1| hypothetical protein yaldo0001_19420 [Yersinia aldovae ATCC 35236]
gi|238704126|gb|EEP96659.1| hypothetical protein yaldo0001_19420 [Yersinia aldovae ATCC 35236]
Length = 760
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 49/120 (40%), Gaps = 8/120 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHR 162
FH + + + AN+ A+PI+S + +P L+A+ +L ++ I + + L +
Sbjct: 388 FHGVSLLSIPANLWAVPIVSLLTVPCVLLALAFTLLPAVAGIFWHMADLSLTATLF---- 443
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
N F IG +P + + + + + +G+ ++ + S D
Sbjct: 444 ---PLNYFNIGWVPTGAASVALSYSGWLAILIWRFQWWRNYPLGVMVLCINMVLLSQRRD 500
>gi|328675321|gb|AEB27996.1| competence protein [Francisella cf. novicida 3523]
Length = 672
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 52/116 (44%), Gaps = 12/116 (10%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-----LDNIPFGVMAWG 152
+ +F + ++ANI+AIP++SF ++P L+++LL + L + +
Sbjct: 331 PISVYYFGGFSIVSILANIVAIPLVSFFIVPLLLLSLLLSFIGVKLWLLPMLFLKFLVAY 390
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF-CKTNIRHIGSIMIGI 207
L + + A IS S V ++ +L++F ++R +G M +
Sbjct: 391 LSFLTNYAGFISYWS------YFSFFSLVITILGIILVIFPFSKSLRILGLAMCLV 440
>gi|322832234|ref|YP_004212261.1| DNA internalization-related competence protein ComEC/Rec2 [Rahnella
sp. Y9602]
gi|321167435|gb|ADW73134.1| DNA internalization-related competence protein ComEC/Rec2 [Rahnella
sp. Y9602]
Length = 748
Score = 52.5 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/248 (15%), Positives = 93/248 (37%), Gaps = 32/248 (12%)
Query: 38 NFSSYYKGISAIGYFYS---IPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
+F + A+ +++ +P M + + W ++ +
Sbjct: 317 SFWLSCFAVGALVFWFQWVPLPAMFQQAWYWALFRW---------------GHLQVGMTL 361
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL--LMILSLDNIPFGVMAWG 152
+ FH + V+ AN+ A+P++S + +P L+A+L +L + ++
Sbjct: 362 LLLPLQVWIFHGVNVFSFPANMWAVPVVSLITVPLVLLALLTNAAPCALMDNAQALLWQL 421
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRH---IGSIMIGIT 208
D + +A A + I + E+ ++ +L+++ + +R+ + + I+
Sbjct: 422 ADATLRLALWGVKALPDGWIP-LGESFLAVSLMGWLVLLCWRICPLRYCLSLLLSLFAIS 480
Query: 209 IIILFTFPYSF-SPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
+ L P D+L G V L+ KN Y W+ + P
Sbjct: 481 SVWLNRNPSERWRVDMLDIGHGLSV-LISKNGRGILYDTGNR-----WEGGSAAEQNIIP 534
Query: 268 HVQKEDLQ 275
++ +++Q
Sbjct: 535 YLNWKNIQ 542
>gi|167765260|ref|ZP_02437373.1| hypothetical protein BACSTE_03648 [Bacteroides stercoris ATCC
43183]
gi|167696888|gb|EDS13467.1| hypothetical protein BACSTE_03648 [Bacteroides stercoris ATCC
43183]
Length = 684
Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 64/185 (34%), Gaps = 15/185 (8%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + ++AI + + + +
Sbjct: 342 LFDVGFQLSFSAVAAIVLL-----------QPGLYGLLSVKNRLLRKAWGLVTVSVAAQI 390
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWG 152
+A + ++ F + L+ N+L IP++S +V A +I ++L L + V+
Sbjct: 391 GTAPLVMLY-FSRFSTHFLLTNLLVIPLVSLIVY-AAVILLVLTPFPVLQQLFADVVEIP 448
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
L + + I I RI + + L++FC+ +R + + +L
Sbjct: 449 LRMQNALLRWIEQLPLA-SIDRIWVDIWDVFLFYCCLLLFCRVWMRRTAANVYIALSALL 507
Query: 213 FTFPY 217
Y
Sbjct: 508 LCVSY 512
>gi|91789018|ref|YP_549970.1| DNA internalization-like protein competence protein ComEC/Rec2
[Polaromonas sp. JS666]
gi|91698243|gb|ABE45072.1| DNA internalization-related competence protein ComEC/Rec2
[Polaromonas sp. JS666]
Length = 860
Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 54/134 (40%), Gaps = 8/134 (5%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F+ + + GL+AN +AIP ++ VV P ++ + L + AW + ++ +
Sbjct: 487 FNQVSLVGLLANAVAIPWVTLVVTPLAMLGV------LWAPVWDAAAWAVGLLAVFLQWL 540
Query: 164 SVAHNE-FCIGRIPETSFVTIVVEFLLMVF-CKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ + P V+ +L+ + R +G ++ ++
Sbjct: 541 AAWPLASVSVAAAPPWCAAFGVLGGVLLALRLPWHWRALGVPLLLPVLLWQPVRVAPGQF 600
Query: 222 DLLISEKGNLVALV 235
+LL ++ G A++
Sbjct: 601 ELLAADIGQGNAVL 614
>gi|332760116|gb|EGJ90414.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
flexneri 2747-71]
Length = 398
Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 66/175 (37%), Gaps = 12/175 (6%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 201 AAAVAALIFWYQWFPCPEWQLPPVLRAVVS---LIHLQLGITLLLMPMQIVIFHGISLTS 257
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+ AIP+++F+ +P L A+++ L L+ + + L ++ S+
Sbjct: 258 FIANLFAIPLVTFITVPLILAAMVVHFSGPLILEQGLWFLADRSLALLFW--GLKSLPEG 315
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
I + + L+V + N R + ++ + +++ + PD
Sbjct: 316 WINIVECWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPD 367
>gi|71280108|ref|YP_268850.1| DNA internalization-related competence protein ComEC/Rec2
[Colwellia psychrerythraea 34H]
gi|71145848|gb|AAZ26321.1| DNA internalization-related competence protein ComEC/Rec2
[Colwellia psychrerythraea 34H]
Length = 860
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 64/184 (34%), Gaps = 21/184 (11%)
Query: 43 YKGISAIGYF--YSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI---GTYGSASAS 97
+ ++A + Y++ + S W K +L + +
Sbjct: 369 FSLLTASFWLSVYAVAIIFVSLWRFKAWMNKG------PYLWRFFKTLFIIQVALTVMLM 422
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F I + L ANI+A+P +S IP L++++L+ +S +++ M L +
Sbjct: 423 PITALFFQKISLVSLFANIIAVPWMSAFSIPTALMSVVLIPIS-ESLAQWFMMLSLQSLT 481
Query: 158 HIAHR---ISVAHNEFCIGRIPETSFVTI----VVEFLLM--VFCKTNIRHIGSIMIGIT 208
+ +S N + V + L + + I +++ ++
Sbjct: 482 WLWFYLDLLSELPNAIISLSFVQQMIVLLVGNAAFSILYLSPCLWTRGGKQITFVLLALS 541
Query: 209 IIIL 212
I+
Sbjct: 542 AIVF 545
>gi|77460399|ref|YP_349906.1| DNA internalization-like competence protein ComEC/Rec2 [Pseudomonas
fluorescens Pf0-1]
gi|77384402|gb|ABA75915.1| putative membrane protein [Pseudomonas fluorescens Pf0-1]
Length = 747
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISV 165
I + G +AN+LA+P +SF V+P L+ LL+ + + + +D + I+
Sbjct: 376 ISLSGPLANLLAVPCVSFAVLPPALLGTLLLPIPYVGEGLLWLAGGLIDGLFRALALIAG 435
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ IP + LL++ +
Sbjct: 436 RWPAWIAASIPGWVLALGCIGALLLLLPRG 465
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 35/255 (13%), Positives = 88/255 (34%), Gaps = 14/255 (5%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ +L P G P FD+ + I A G ++ + +
Sbjct: 121 IKSGERWRLAVKLKRPGGLLNPDAFDYEAWLLAQRIGATGTVKDGQRLAPAQWAWRDSIR 180
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+++ ++ N A + + + + + G + ++L I ++ A
Sbjct: 181 QRLLAVDAQGRNGALAALVLGDGSGLGR---EDWQILQDTGTV-HLLVISGQHIGLLAAL 236
Query: 131 LIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL 189
+ A++ + L + + W L +A ++ + +P +V L
Sbjct: 237 MYALV---VGLARVGIWPLRWPWLPWACGLAFAAALGYGLLAGFDVPVRRACVMVA---L 290
Query: 190 MVFCKTNIRHIGS---IMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSN 246
++ + RH+G+ +++ ++L S P L +S V + + +
Sbjct: 291 VLLWRLRFRHLGAWWPLLLAFDGVLLMDPLASLRPGLWLSFVAVAVLIFTFGGRLGPWRW 350
Query: 247 PPSFIFSQWKSALIT 261
++ +QW A+
Sbjct: 351 WQTWTRAQWLIAIGL 365
>gi|228910162|ref|ZP_04073981.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis IBL 200]
gi|228849445|gb|EEM94280.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis IBL 200]
Length = 659
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
I ++ L+ HF Y + N+L +P LS +V+P +I +L M +
Sbjct: 244 ISIISQLVSTPILLYHFGYFSPYSIFLNLLYVPFLSIIVLPCSIIILLCMPI 295
>gi|291485007|dbj|BAI86082.1| putative integral membrane protein [Bacillus subtilis subsp. natto
BEST195]
Length = 767
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 48/136 (35%), Gaps = 2/136 (1%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
+ + L+ HFH + + N+L +P +F ++P + +LL+ L S +
Sbjct: 349 VSLIAQLGSLPILLYHFHQFSIISVPMNMLMVPFYTFCILPGAVAGVLLLSLSVSFGRLF 408
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
F + + I+ + P + + ++++ R + +M+
Sbjct: 409 FSWFDLLISWTNRLITNIADVEVFTIMIAHPAPVLLFLFTVTIILLLMAIEKRSLSQLMV 468
Query: 206 GITIIILFTFPYSFSP 221
I F P
Sbjct: 469 TGGICCTVMFLLFIYP 484
>gi|221068506|ref|ZP_03544611.1| DNA internalization-related competence protein ComEC/Rec2
[Comamonas testosteroni KF-1]
gi|220713529|gb|EED68897.1| DNA internalization-related competence protein ComEC/Rec2
[Comamonas testosteroni KF-1]
Length = 829
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 69/204 (33%), Gaps = 18/204 (8%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+ F + + + S + W K + ++ +L +
Sbjct: 388 LWQAGFWLSFIAVGVLLASGSGAADAKGQSAVRRWMAKLHALWREQWLISLALAPLGLLL 447
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
F + V GL+AN+LAIP ++ VV P L+A L + + + GL
Sbjct: 448 ----------FGQVSVVGLLANLLAIPWVTLVVTPLALLAAALPMAASAAAVAMLPLMGL 497
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETS--FVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
++ + P + I L++ +R + ++ +
Sbjct: 498 ------LQWLAALPWAVWVLPQPAWWASVLAIAAGLLVIAPLPGRLRLVAALFALPALFW 551
Query: 212 LFTFPYSFSPDLLISEKGNLVALV 235
+P +LL ++ G A++
Sbjct: 552 PQAWPRVGEFELLAADIGQGNAVI 575
>gi|229825120|ref|ZP_04451189.1| hypothetical protein GCWU000182_00471 [Abiotrophia defectiva ATCC
49176]
gi|229790492|gb|EEP26606.1| hypothetical protein GCWU000182_00471 [Abiotrophia defectiva ATCC
49176]
Length = 810
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 72/160 (45%), Gaps = 20/160 (12%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I K YD P+ + I +S + F +F ++ IG FY +P+++Y
Sbjct: 285 IGKSYD-LPSGLALAAIVIMSINHRVIYQSGFQLSF------LAVIGIFYIMPELMYIF- 336
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ + K I+ + L+ I ++ + + ++ +F+ I + G++ NI+ IP++S
Sbjct: 337 NVQSLNTKGINKLAYVILSSIICSVSI--NLATLPVILINFYEISLLGIVLNIIVIPLMS 394
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
+V+ GLI + F + I+ IA+ I
Sbjct: 395 VLVV-TGLIG------GFTALIFEMAG---RFILGIAYYI 424
>gi|197263804|ref|ZP_03163878.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197242059|gb|EDY24679.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
Length = 672
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV IP L ++L L+ + + L + ++
Sbjct: 298 FHGISVTAMLANLFAVPWVTFVTIPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 357
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I + +L+++ + N+ + + ++L ++P
Sbjct: 358 NAL-----PQGWVNIDNRWQWLTFLPWLMLIAWRLNV-WRTWPAVCLCGLLLMSWPLWRP 411
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 412 ----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLT 467
Query: 276 EKN 278
+
Sbjct: 468 PEG 470
>gi|110804921|ref|YP_688441.1| hypothetical protein SFV_0914 [Shigella flexneri 5 str. 8401]
gi|110614469|gb|ABF03136.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|313650847|gb|EFS15248.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
flexneri 2a str. 2457T]
gi|332758999|gb|EGJ89309.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
flexneri 4343-70]
gi|333007026|gb|EGK26521.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
flexneri K-218]
gi|333019989|gb|EGK39260.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
flexneri K-304]
Length = 398
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 66/175 (37%), Gaps = 12/175 (6%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 201 AAAVAALIFWYQWFPCPEWQLPPVLRAVVS---LIHLQLGITLLLMPMQIVIFHGISLTS 257
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+ AIP+++F+ +P L A+++ L L+ + + L ++ S+
Sbjct: 258 FIANLFAIPLVTFITVPLILAAMVVHFSGPLILEQGLWFLADRSLALLFW--GLKSLPEG 315
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
I + + L+V + N R + ++ + +++ + PD
Sbjct: 316 WINIVECWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPD 367
>gi|332767861|gb|EGJ98051.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
flexneri 2930-71]
Length = 398
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 66/175 (37%), Gaps = 12/175 (6%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 201 AAAVAALIFWYQWFPCPEWQLPPVLRAVVS---LIHLQLGITLLLMPMQIVIFHGISLTS 257
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+ AIP+++F+ +P L A+++ L L+ + + L ++ S+
Sbjct: 258 FIANLFAIPLVTFITVPLILAAMVVHFSGPLILEQGLWFLADRSLALLFW--GLKSLPEG 315
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
I + + L+V + N R + ++ + +++ + PD
Sbjct: 316 WINIVECWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPD 367
>gi|320173254|gb|EFW48463.1| hypothetical protein SDB_04231 [Shigella dysenteriae CDC 74-1112]
Length = 754
Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 70/183 (38%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I + IAN+LAI +++F+ +P L A+++ L L+ + + L ++
Sbjct: 380 FHGISLTSFIANLLAITLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSF 219
S+ I + + L+V + N R + ++ + + +++ +
Sbjct: 438 GLKSLPEGWINIAERWQW---LSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKP 494
Query: 220 SP---DLLISEKGNLVA-LVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQ 275
P + + + G +A ++ +N Y W P + +L+
Sbjct: 495 RPNEWQVYMLDVGQGLAMVIARNGKAILYDTG-----LAWPEGDSGQQLIIPWLHWHNLE 549
Query: 276 EKN 278
+
Sbjct: 550 PEG 552
>gi|117921026|ref|YP_870218.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella sp. ANA-3]
gi|117613358|gb|ABK48812.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella sp. ANA-3]
Length = 773
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/233 (15%), Positives = 77/233 (33%), Gaps = 33/233 (14%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + ++ I Y I E + T+ K + Q I+ + ++
Sbjct: 325 FWLSFCALAIILYTLESAPRIQPVEGNATFRAKARGRLAQ--FWSIQWRLSLVLGLVQAV 382
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F F + V+ L N+L +P S +VIP ++A +L ++ + H
Sbjct: 383 F----FGGLSVHSLWMNMLVVPWFSLIVIPLSMLAFIL------WWVGTLLGQAWFALFH 432
Query: 159 IAHRISVAHNEF--CIGRIPETS-------FVTIVVEFLLMVFCK--------TNIRH-I 200
+A + + + G +P + L ++ + +
Sbjct: 433 LADLTLLPYGKLLELSGDLPAHWHSVSETLLGASLCALLALILWRYLPHHSRYGLWHLPL 492
Query: 201 GSIMIGITIIILFTFPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSF 250
+ I ++I S SP L+ L +++++ Y +F
Sbjct: 493 ALLFIPFILVIFPRVTESSSPQWTLHLLDVGQGLAVVIEQDKRALIYDTGAAF 545
>gi|170694755|ref|ZP_02885906.1| ComEC/Rec2-related protein [Burkholderia graminis C4D1M]
gi|170140386|gb|EDT08563.1| ComEC/Rec2-related protein [Burkholderia graminis C4D1M]
Length = 1015
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
A++ + + + + F IP+ G +AN AIP +S +V P ++A +++ LD
Sbjct: 509 AHVQFAVTLALAPLTVYWFAQIPLIGPLANAFAIPWVSVLVTP-SVLAGVVLPAPLDAYA 567
Query: 146 FGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSI 203
+ + LD++I R+S + + + + L + + +R +
Sbjct: 568 WRIAHALLDVMIAGLQRLSGPRWVLWWLPQPSGWTLAAAAAGVLWCLAPRGWPLRWAAPL 627
>gi|302038043|ref|YP_003798365.1| putative competence protein ComEC/Rec2 related protein [Candidatus
Nitrospira defluvii]
gi|300606107|emb|CBK42440.1| putative Competence protein ComEC/Rec2 related protein [Candidatus
Nitrospira defluvii]
Length = 843
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/197 (15%), Positives = 62/197 (31%), Gaps = 18/197 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD +F Y + ++ + + + + +E
Sbjct: 354 LFDISFQLSY----VSVWALALALSRETPVDELPLPQESPAGRMVYWFHESLRLTSLVTL 409
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL-LMILSLDNIPFGV---- 148
A+ + F+ + G+ AN+L +P + FV +P L++ + +M +P
Sbjct: 410 ATVPLVACY-FNQVSWMGVFANLLMVPFVGFVFLPISLLSAVWVMATHSSTLPGAAFIDS 468
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIM---- 204
+ GL I H ++ P + + L H ++
Sbjct: 469 LGQGL---IASTHVLAGLPGAEWFVAAPTIPMMLL-FYLLGWALLAGWPAHAAPLLRRSM 524
Query: 205 IGITIIILFTFPYSFSP 221
IL + +S P
Sbjct: 525 ASGLACILLWWLWSPRP 541
>gi|271500781|ref|YP_003333806.1| DNA internalization-like competence protein ComEC/Rec2 [Dickeya
dadantii Ech586]
gi|270344336|gb|ACZ77101.1| DNA internalization-related competence protein ComEC/Rec2 [Dickeya
dadantii Ech586]
Length = 785
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/248 (15%), Positives = 82/248 (33%), Gaps = 32/248 (12%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F ++A+ ++Y + + W W + ++ +
Sbjct: 361 SFWLSALAVAALIFWYQWAPLSPHMQHAWRWVWLRGLHMQAGVTLLLM------------ 408
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ FH + + L AN+ A+P++SFV P L+A+ LM ++A GL +
Sbjct: 409 PLQVLIFHGVSLSSLPANLWAVPLVSFVTTPLILLALPLM-------GIPLVAQGLWWLA 461
Query: 158 HIA-HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+ + + G +P + + + + ++LF
Sbjct: 462 DRSLALVFLPLQAMPPGWLPLGEHLVPYSVAGWLAVIVWRFGWWRTYPFSLLALVLFMVL 521
Query: 217 YSFSP------DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQ 270
P D+L G L ++++ Y P W+ P+++
Sbjct: 522 RPKPPAPLWRIDMLDVGHG-LAVVIEQQGKAWLYDTGPG-----WEGGNSAEREILPYLK 575
Query: 271 KEDLQEKN 278
LQ +
Sbjct: 576 WRGLQLEG 583
>gi|309781219|ref|ZP_07675956.1| DNA internalization-related competence protein ComEC/Rec2
[Ralstonia sp. 5_7_47FAA]
gi|308920040|gb|EFP65700.1| DNA internalization-related competence protein ComEC/Rec2
[Ralstonia sp. 5_7_47FAA]
Length = 839
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 50/177 (28%), Gaps = 7/177 (3%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHF 104
G AI + + + + W ++ + G F
Sbjct: 383 GAVAIIFIAAQMALDGHRSENAGWVGATRRALAGGTRIQFAVTFGLLPLTLLL------F 436
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS 164
V + AN LAIP +SFV P LI L L + ++ ++
Sbjct: 437 QQTSVVSVAANGLAIPAVSFVTTPLALIGAAL-PDPLAQPVLALAEASFRWLVVWLEWLA 495
Query: 165 VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ + V + + + ++ +R G +++ P
Sbjct: 496 KPRWSVWVAPVGPMWAVLLSMVAVALLLVPGGLRAWAWRAQGALLLLPLVLAREPLP 552
>gi|311069160|ref|YP_003974083.1| DNA channel for uptake in competent cells [Bacillus atrophaeus
1942]
gi|310869677|gb|ADP33152.1| DNA channel for uptake in competent cells [Bacillus atrophaeus
1942]
Length = 777
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 51/151 (33%), Gaps = 23/151 (15%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM----ILS 140
A + + LI +F + + NI+ +P + V+P +I LL+ +
Sbjct: 356 LAMVSLIAQLGSLPILIYYFQQFSLISIPMNIIMVPFYTMFVMPFSMIGFLLLSLSEPVG 415
Query: 141 LDNIPFG---VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL-MVFCKTN 196
+ + + +M W +I + I P ++ + +V T
Sbjct: 416 -ECLFYWFDYIMCWSDKLI----KYAADIEQFTVIAARPN---ALVLFGLIGSIVVLLTA 467
Query: 197 I-------RHIGSIMIGITIIILFTFPYSFS 220
+ R + ++ + ++ FP
Sbjct: 468 MEKSALYQRLLSVLLFIAMLFLVVIFPRLDP 498
>gi|167037815|ref|YP_001665393.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320116233|ref|YP_004186392.1| DNA internalization-like competence protein ComEC/Rec2
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166856649|gb|ABY95057.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319929324|gb|ADV80009.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 757
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/233 (14%), Positives = 80/233 (34%), Gaps = 30/233 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F + AI YFY +K+S + + +
Sbjct: 321 LWDVGFQLSFVATLAILYFYKP-------------IREKLSMLNPKIRELVALTLSAQIG 367
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-GVMAW- 151
F + +FH I + L++NI+ +P+ + V ++ L ++ L P + +
Sbjct: 368 TI--PFTMYYFHYISIISLLSNIVIVPLANIAV----VLGFLSAMIGLIFPPLSYFINFI 421
Query: 152 ---GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK--TNIRHIGSIMIG 206
+++I++I + +P + + L ++ + I +
Sbjct: 422 NIPVVEVILYITKLFNSFPYASINTIVPPLYVIVLYYGILAVLLSSFDKKTKKISIAIAL 481
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSAL 259
+I +F + Y DL + + + ++ + +F+ L
Sbjct: 482 TFVIAIFFYNYLLPKDLEV----TFLDVGQGDSTFVRTPHGKTFLIDGGGRPL 530
>gi|167040715|ref|YP_001663700.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter sp. X514]
gi|300914755|ref|ZP_07132071.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter sp. X561]
gi|307724011|ref|YP_003903762.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter sp. X513]
gi|166854955|gb|ABY93364.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter sp. X514]
gi|300889690|gb|EFK84836.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter sp. X561]
gi|307581072|gb|ADN54471.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter sp. X513]
Length = 757
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/233 (14%), Positives = 80/233 (34%), Gaps = 30/233 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F + AI YFY +K+S + + +
Sbjct: 321 LWDVGFQLSFVATLAILYFYKP-------------IREKLSMLNPKIRELVALTLSAQIG 367
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-GVMAW- 151
F + +FH I + L++NI+ +P+ + V ++ L ++ L P + +
Sbjct: 368 TI--PFTMYYFHYISIISLLSNIVIVPLANIAV----VLGFLSAMIGLIFPPLSYFINFI 421
Query: 152 ---GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK--TNIRHIGSIMIG 206
+++I++I + +P + + L ++ + I +
Sbjct: 422 NIPVVEVILYITKLFNSFPYASINTIVPPLYVIVLYYGILAVLLSSFDKKTKKISIAIAL 481
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSAL 259
+I +F + Y DL + + + ++ + +F+ L
Sbjct: 482 TFVIAIFFYNYLLPKDLEV----TFLDVGQGDSTFVRTPHGKTFLIDGGGRPL 530
>gi|228993068|ref|ZP_04152991.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
pseudomycoides DSM 12442]
gi|228766716|gb|EEM15356.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
pseudomycoides DSM 12442]
Length = 774
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 51/133 (38%), Gaps = 8/133 (6%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA---ILLMILSLDNI 144
+ +++ L+ HF Y + N+L +P+LS VV+P ++ IL + +
Sbjct: 359 LSVISQLASTPILLYHFGYFSPYSIFLNLLYVPLLSCVVLPCSIVIFACILFVPFVAKWL 418
Query: 145 PFGVMAWGLDIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKT--NIRHI 200
+++ L I I ++ F G+ P V + + + + + +
Sbjct: 419 A-QMLSVCLTISNDILQYCENLPFLRFTFGQTPLFLIVLYCFSIVSIFIVWERVVRKKFL 477
Query: 201 GSIMIGITIIILF 213
+ I +F
Sbjct: 478 FLTVGFFLFICIF 490
>gi|228999118|ref|ZP_04158700.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
mycoides Rock3-17]
gi|228760735|gb|EEM09699.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
mycoides Rock3-17]
Length = 774
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 51/133 (38%), Gaps = 8/133 (6%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA---ILLMILSLDNI 144
+ +++ L+ HF Y + N+L +P+LS VV+P ++ IL + +
Sbjct: 359 LSVISQLASTPILLYHFGYFSPYSIFLNLLYVPLLSCVVLPCSIVIFACILFVPFVAKWL 418
Query: 145 PFGVMAWGLDIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKT--NIRHI 200
+++ L I I ++ F G+ P V + + + + + +
Sbjct: 419 A-QMLSVCLTISNDILQYCENLPFLRFTFGQTPLFLIVLYCFSIVSIFIVWERVVRKKFL 477
Query: 201 GSIMIGITIIILF 213
+ I +F
Sbjct: 478 FLTVGFFLFICIF 490
>gi|229006666|ref|ZP_04164300.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
mycoides Rock1-4]
gi|228754527|gb|EEM03938.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
mycoides Rock1-4]
Length = 774
Score = 51.7 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 51/133 (38%), Gaps = 8/133 (6%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA---ILLMILSLDNI 144
+ +++ L+ HF Y + N+L +P+LS VV+P ++ IL + +
Sbjct: 359 LSVISQLASTPILLYHFGYFSPYSIFLNLLYVPLLSCVVLPCSIVIFACILFVPFVAKWL 418
Query: 145 PFGVMAWGLDIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKT--NIRHI 200
+++ L I I ++ F G+ P V + + + + + +
Sbjct: 419 A-QMLSVCLTISNDILQYCENLPFLRFTFGQTPLFLIVLYCFSIVSIFIVWERVVRKKFL 477
Query: 201 GSIMIGITIIILF 213
+ I +F
Sbjct: 478 FLTVGFFLFICIF 490
>gi|294010879|ref|YP_003544339.1| ComEC/Rec2-related protein [Sphingobium japonicum UT26S]
gi|292674209|dbj|BAI95727.1| ComEC/Rec2-related protein [Sphingobium japonicum UT26S]
Length = 327
Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 51/129 (39%), Gaps = 1/129 (0%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
I RL PP+ P+ PG +DF +Y++GI A G ++ + + +
Sbjct: 169 GAIIAFRTRLMPPAPPSLPGGYDFARRAYFEGIGATGRALPPVAVLRPATAAPRLRTRLF 228
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
+ + + + + GL A++L+I L + A +I
Sbjct: 229 EHVLERVPGKGAGIAAALATGDQGAIAQADAEAMRRSGL-AHLLSISGLHVTALIAAVIF 287
Query: 134 ILLMILSLD 142
+L+ +++L
Sbjct: 288 LLMRMMALS 296
>gi|119511870|ref|ZP_01630970.1| competence protein [Nodularia spumigena CCY9414]
gi|119463512|gb|EAW44449.1| competence protein [Nodularia spumigena CCY9414]
Length = 785
Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 70/178 (39%), Gaps = 19/178 (10%)
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS--FVVIPAGLIAIL 135
+ + + F +P YG++ NI++ P+++ + IA L
Sbjct: 402 LPLAIASLIAVPLAATIWTLPVQLYVFGVMPAYGVLLNIISTPLIATISIGGIISAIAAL 461
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
+ + GV+ + D +I + S + N +G I + I +++V+
Sbjct: 462 VWPAGGSALA-GVLYFPTDWLIKLVEVFSNLPGNYLRVGSISTWQLLGIY-ALIILVWLV 519
Query: 195 TNI--RHIGSIMIGITIIILFTFPYSFS------------PDLLISEKGNLVALVDKN 238
R + ++ I+++++ ++ Y+ + P ++I ++G + + +
Sbjct: 520 RWWQKRWWFAGLMVISLVLIPSWYYTNTLFRITVLAAGTEPVVVIQDRGKVTLINSGD 577
>gi|300390222|gb|ADK10923.1| ComEC [Thermoanaerobacterium saccharolyticum]
Length = 757
Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 9/125 (7%)
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA- 129
K I IK + E+ + + I I FH I + L+ NIL +PI+S V+
Sbjct: 345 KGIVKIKSEKIKEVVSATLAAQIGTVPII-IYFFHNISIISLLPNILIVPIVSVAVVLGF 403
Query: 130 --GLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVV 185
++ ++ M +IP ++ ++I++++ S + H + + P +
Sbjct: 404 LSAILGLIYMPF---SIPLNLINIPVVEIVLYLTRIFSQIPHASISVSQPPVYMMLCYYA 460
Query: 186 EFLLM 190
+L+
Sbjct: 461 ALILL 465
>gi|315645944|ref|ZP_07899065.1| DNA internalization-related competence protein ComEC/Rec2
[Paenibacillus vortex V453]
gi|315278705|gb|EFU42019.1| DNA internalization-related competence protein ComEC/Rec2
[Paenibacillus vortex V453]
Length = 884
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
I + I +F+ + + +IAN++ +P++S +V+P G++++LL + +
Sbjct: 388 VGITVVAQLISFPLTIYYFNQVSLLSVIANLILVPVISLIVLPLGMVSLLLSWVWMRGAG 447
Query: 146 FG--VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
+ + W + I ++ + + P +++ L ++
Sbjct: 448 WLANITEWLNQLTFRIVEWMNASSAFMTLWPSPSLAWILAYYVALYVLL 496
>gi|297622796|ref|YP_003704230.1| DNA internalization-related competence protein ComEC/Rec2 [Truepera
radiovictrix DSM 17093]
gi|297163976|gb|ADI13687.1| DNA internalization-related competence protein ComEC/Rec2 [Truepera
radiovictrix DSM 17093]
Length = 796
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 74/216 (34%), Gaps = 16/216 (7%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES 64
+ +P+PA + L PS LFD +F Y + I F
Sbjct: 339 AGRLEPWPALALAALVTLLLNPSF-----LFDLSFQLSYGSVMGILLFAGPTLRRLLGAR 393
Query: 65 HNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ W ++ A + A F+ HF+ +P++G + N++A+P+ +
Sbjct: 394 AASLAWWHPGTLLVGG-----AVVSASAQALTLPFVAHHFNLVPLFGPLVNVVAVPLATL 448
Query: 125 VV---IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+V AGL ++ + L+ G +I ++ + P
Sbjct: 449 LVPLGFLAGLAGLVSLPLAEALGALASPLAG--AMIAVSALAAPWPQVTWGELEPIGFLY 506
Query: 182 TIVVEFLLMVFCKTNIR-HIGSIMIGITIIILFTFP 216
V + + +R G +++ +I P
Sbjct: 507 FGVGALAAALVAQGRLRPWRGLLVVAAAMIASSLTP 542
>gi|91776445|ref|YP_546201.1| DNA internalization-related competence protein ComEC/Rec2
[Methylobacillus flagellatus KT]
gi|91710432|gb|ABE50360.1| DNA internalization-related competence protein ComEC/Rec2
[Methylobacillus flagellatus KT]
Length = 802
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 61/153 (39%), Gaps = 7/153 (4%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F + + +AN AIP++S V++P L+ L + SL + W + + + + +
Sbjct: 411 FGQVSLISPLANAFAIPLVSLVIVPLTLLGSFLPLDSL----LWLAHWLMQLAMALLLWL 466
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT--NIRHIGSIMIGITIIILFTFPYSFSP 221
S + + IP + + + + + + +R +G + + + P
Sbjct: 467 SESPSAIWQQHIPSIPAMLLALAGVACLLLPSGVPLRWLGLAGMLPLFLDAPSMPARGDM 526
Query: 222 DLLISEKGNLVA-LVDKNTLISNYSNPPSFIFS 253
+ + + G +A +V+ + Y P F
Sbjct: 527 RVAVLDVGQGLAVVVNTQNHVLLYDTGPRFSSE 559
>gi|255320327|ref|ZP_05361511.1| DNA internalization-related competence protein ComEC/Rec2
[Acinetobacter radioresistens SK82]
gi|262379387|ref|ZP_06072543.1| metallo-beta-lactamase superfamily hydrolase [Acinetobacter
radioresistens SH164]
gi|255302522|gb|EET81755.1| DNA internalization-related competence protein ComEC/Rec2
[Acinetobacter radioresistens SK82]
gi|262298844|gb|EEY86757.1| metallo-beta-lactamase superfamily hydrolase [Acinetobacter
radioresistens SH164]
Length = 812
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 66/188 (35%), Gaps = 17/188 (9%)
Query: 40 SSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIF 99
++++ A I + I + + WK+ + ++ +
Sbjct: 371 AAFWLSFGACFILLRIYESIDRQPAQPAFNWKQ----RVLTAGKLLIESQGKIFIALFPL 426
Query: 100 LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL----MILSLDNIPFGVMAWGLDI 155
++ F + + NIL IP+L VV+P ++A L L L + F GL++
Sbjct: 427 VLIFFKQVSWIAPLTNILVIPLLGAVVVPLDILAACLSYIISPLGL--LLFHCSDLGLNL 484
Query: 156 IIHIAHRISVAHNEFCIG-RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
+ I + N G V++ + +++ ++ I ++
Sbjct: 485 GLWILEILDHLFNPQLQGIAFTPLLIVSLSIGLIILYLPRS------VIPKAWALLCFVP 538
Query: 215 FPYSFSPD 222
S +PD
Sbjct: 539 VFTSRAPD 546
>gi|187924541|ref|YP_001896183.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia phytofirmans PsJN]
gi|187715735|gb|ACD16959.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia phytofirmans PsJN]
Length = 929
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 53/148 (35%), Gaps = 4/148 (2%)
Query: 59 IYSSESHNTWTWKKISSIKQSFLN-EIRANIGTYGSASASIFLIKHFHCIPVYGLIANIL 117
++ + ++ + A + + + + I F IP+ G +AN
Sbjct: 478 GAAASRWSRLVIVLRRRLRDAGARLRSAAQVQFAVTIALAPLTIYWFAQIPLIGPLANAF 537
Query: 118 AIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIP 176
AIP +S +V PA ++A + + D + LD++ +S + + +
Sbjct: 538 AIPWVSLLVTPA-VLAGVALPAPFDAYAWHGAHALLDLLAVGLQALSGPAWTLWRLPQPD 596
Query: 177 ETSFVTIVVEFLLMVFCKTN-IRHIGSI 203
+ V L + + +R +
Sbjct: 597 AWTLAAAAVGVLWCLAPRGWPLRWAAPL 624
>gi|332762683|gb|EGJ92946.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
flexneri K-671]
Length = 398
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 66/175 (37%), Gaps = 12/175 (6%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 201 AAAVAALIFWYQWFPCPEWQLPPVLRAVVS---LIHLQLGITLLLMPMQIVIFHGISLTS 257
Query: 112 LIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
IAN+ AIP+++F+ +P L A+++ L L+ + + L ++ S+
Sbjct: 258 FIANLFAIPLVTFITVPLILAAMVVHFSGPLILEQGLWFLADRSLALLFW--GLKSLPEG 315
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
I + + LMV + N R + ++ + +++ + PD
Sbjct: 316 WINIVECWQW---LSFSPWFLMVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPD 367
>gi|323702387|ref|ZP_08114052.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfotomaculum nigrificans DSM 574]
gi|323532693|gb|EGB22567.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfotomaculum nigrificans DSM 574]
Length = 815
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/169 (13%), Positives = 64/169 (37%), Gaps = 19/169 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F + ++ G FY PK++ + W + +
Sbjct: 354 LYDIGFQLSF--VATWGLFYITPKLL---DLWPGWPRAL----------ALLVAVPLAAQ 398
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ ++ +F+ + ++AN+L + +++ +++ G +++L + L + ++ GL
Sbjct: 399 LATLPLVVLYFNLVSPVSILANLLTVHLVA-LIMLFGGMSLLPGLFYLPLAHWLNVSTGL 457
Query: 154 --DIIIHIAHR-ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRH 199
D+ + + S+ + + P V + + + I
Sbjct: 458 LTDLFLWLVQWCNSLPGAAWYLPTPPWWVVVAYYICLVGSLELVHRIEW 506
>gi|195874043|ref|ZP_03080162.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|195630913|gb|EDX49499.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Newport
str. SL317]
Length = 737
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV IP L ++L L+ + + L + ++
Sbjct: 363 FHGISVTAMLANLFAVPWVTFVTIPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 422
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I + +L+++ + N+ + + ++L ++P
Sbjct: 423 NAL-----PQGWVNIDNRWQWLTFLPWLMLIAWRLNV-WRTWPAVCLCGLLLMSWPLWRP 476
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 477 ----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLT 532
Query: 276 EKN 278
+
Sbjct: 533 PEG 535
>gi|209519979|ref|ZP_03268758.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia sp. H160]
gi|209499576|gb|EDZ99652.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia sp. H160]
Length = 873
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 70/199 (35%), Gaps = 20/199 (10%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHN---------TWTWKKISSIKQ--SFLNEIR-- 85
F + + AI + S ++ W + +S ++ + +R
Sbjct: 390 FWLSFCAVGAILFAMSGRPRGRDRQASRHDEDGAALAGWQALRRASFQRLRALAERLRSA 449
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
A++ + + + + F IP+ G +AN AIP +S +V P ++A + + LD
Sbjct: 450 AHVQFAVTVALAPLTVYWFAQIPLAGPLANAFAIPWVSLLVTP-TVLAGIALPAPLDAFA 508
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIP---ETSFVTIVVEFLLMVFCKTN-IRHIG 201
+ LD + +A + + + +P + V L + + +R
Sbjct: 509 WRAAHTLLDGL--VAGLQLLLGPRWTLWWLPQPHAWALAAATVGVLWCLAPRGWPLRWAA 566
Query: 202 SIMIGITIIILFTFPYSFS 220
+ ++ +
Sbjct: 567 PLTWLPLLLPSADGALAQP 585
>gi|194450505|ref|YP_002044975.1| hypothetical protein SeHA_C1081 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|205359285|ref|ZP_03224258.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
gi|194408809|gb|ACF69028.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|205337144|gb|EDZ23908.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
Length = 737
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV IP L ++L L+ + + L + ++
Sbjct: 363 FHGISVTAMLANLFAVPWVTFVTIPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 422
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I + +L+++ + N+ + + ++L ++P
Sbjct: 423 NAL-----PQGWVNIDNRWQWLTFLPWLMLIAWRLNV-WRTWPAVCLCGLLLMSWPLWRP 476
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 477 ----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLT 532
Query: 276 EKN 278
+
Sbjct: 533 PEG 535
>gi|194445241|ref|YP_002040181.1| hypothetical protein SNSL254_A1016 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194403904|gb|ACF64126.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Newport
str. SL254]
Length = 737
Score = 51.3 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV IP L ++L L+ + + L + ++
Sbjct: 363 FHGISVTAMLANLFAVPWVTFVTIPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 422
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I + +L+++ + N+ + + ++L ++P
Sbjct: 423 NAL-----PQGWVNIDNRWQWLTFLPWLMLIAWRLNV-WRTWPAVCLCGLLLMSWPLWRP 476
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 477 ----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLT 532
Query: 276 EKN 278
+
Sbjct: 533 PEG 535
>gi|90021347|ref|YP_527174.1| DNA internalization-related competence protein ComEC/Rec2
[Saccharophagus degradans 2-40]
gi|89950947|gb|ABD80962.1| DNA internalization-related competence protein ComEC/Rec2
[Saccharophagus degradans 2-40]
Length = 839
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/187 (13%), Positives = 68/187 (36%), Gaps = 8/187 (4%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + ++ + + ++ +++ T + S I + + + +
Sbjct: 368 FWLSFGAVACLFFSFTAKPAAFATNVETTKAFASASKILRGAKALMLMQWQLFVGLFVLL 427
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG---LDI 155
++ I AN++A+P++S +V+P L+A +L + + G + L I
Sbjct: 428 IVLG--QQISWVSPFANVVAVPVVSILVVPLVLLASVLFSI-WEWGALGCLQVADTLLAI 484
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
++ + + N + + ++ + R + +G+ I + F
Sbjct: 485 VLWWLNWVVDIQNTLPVFNLSLSTPAKWLA--FFATVLILLPRALACRALGVAIAVCVFF 542
Query: 216 PYSFSPD 222
S PD
Sbjct: 543 DQSSKPD 549
>gi|192360228|ref|YP_001982255.1| DNA internalization-related competence protein ComEC/Rec2
[Cellvibrio japonicus Ueda107]
gi|190686393|gb|ACE84071.1| DNA internalization-related competence protein ComEC/Rec2
[Cellvibrio japonicus Ueda107]
Length = 811
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 8/125 (6%)
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLD----IIIH 158
+ IP+ +AN +AIP+++F V+P L+ +L + L + A G+D +
Sbjct: 426 NTIPLLSPVANFVAIPLVTFFVVPCLLLGAVLAFVSQGLGGFFLMLAAVGIDGLMQWLDW 485
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+ S H+ +P + + +L++ R G + + + I + P
Sbjct: 486 LIGLASSWHSPTLTFSLPVAAVLGAAG-LVLLLPVGLVPRWWGYVSLVMGIALAVL-PLP 543
Query: 219 FSPDL 223
P+L
Sbjct: 544 DRPEL 548
Score = 40.6 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 30/206 (14%), Positives = 64/206 (31%), Gaps = 9/206 (4%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE-----SHNT 67
RL P G PG FD+ +G+ A GY +
Sbjct: 153 PGEYWRFHVRLKRPRGMVNPGGFDYQAWLLRRGLGATGYIVQGEPDTSDRWIPIQARIDH 212
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
W W ++ + + + + + + G I++++AI L
Sbjct: 213 WRWHLQQWVRDNTASNNKGILVALLIGDTGGVEKSQWQQVQQTG-ISHLIAISGLHVGF- 270
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHI-AHRISVAHNEFCIGRIPETSFVTIVVE 186
L+ L + + V I ++ A ++ ++ IP + ++
Sbjct: 271 -LALVGYLAGLYVGRCLNGFVQGRPAQIFAYLGAIVFALFYSALAGFNIPTVRTLIMLGV 329
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIIL 212
F L F R + + ++++
Sbjct: 330 FYLAAFFYRRARLSHIYFMALALVLV 355
>gi|147668675|ref|YP_001213493.1| DNA internalization-related competence protein ComEC/Rec2
[Dehalococcoides sp. BAV1]
gi|146269623|gb|ABQ16615.1| DNA internalization-related competence protein ComEC/Rec2
[Dehalococcoides sp. BAV1]
Length = 796
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Query: 75 SIKQSFLNEIRANIGTYGSASASIF--LIKHFHCIPVYGLIANILAIPILSFVVIPAGLI 132
I ++ L + + +A A I+ L+ +F I + G +A +LA+P + F+++ + L
Sbjct: 371 GIFRATLGLVLDGLAVSLAAIAGIWPVLLYYFENISLIGPVATLLAMPAMPFIIVLSFLT 430
Query: 133 AILLMILSLDNIPFGVMAW-GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
A+L ++ I G + W ++ + + G P + I L M+
Sbjct: 431 ALLGLVFPAGAIFMGYLTWLPCRYMLVVVSLTASVPGVLMSGLRPGAMLMGIYYFLLGML 490
Query: 192 FC 193
+
Sbjct: 491 YW 492
>gi|325280502|ref|YP_004253044.1| ComEC/Rec2-related protein [Odoribacter splanchnicus DSM 20712]
gi|324312311|gb|ADY32864.1| ComEC/Rec2-related protein [Odoribacter splanchnicus DSM 20712]
Length = 622
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 42/128 (32%), Gaps = 6/128 (4%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
I +FH I + G +AN++A+P+ +F++ A L L++ L
Sbjct: 336 ITIAAQLPTLPISAYYFHTINLNGFLANLVAVPLATFLLYAAML--CLILPFLLSQYLAW 393
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT----NIRHIGSI 203
+ II+ H + + + + + + T R
Sbjct: 394 IPEVTEKIIMGFLHIFAPYSFNLHHLYPSVPTVLLSYISLIFLYLYFTKPGKKWRRYSMF 453
Query: 204 MIGITIII 211
+ I +
Sbjct: 454 TLFILLCW 461
>gi|161614779|ref|YP_001588744.1| hypothetical protein SPAB_02531 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161364143|gb|ABX67911.1| hypothetical protein SPAB_02531 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 624
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 250 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 309
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I + +L+++ + N+ + + ++L ++P
Sbjct: 310 NAL-----PQGWVNIDNRWQWLTFLPWLMLIAWRLNV-WRTWPAVCLCGLLLMSWPLWRP 363
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 364 ----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLT 419
Query: 276 EKN 278
+
Sbjct: 420 PEG 422
>gi|238913244|ref|ZP_04657081.1| hypothetical protein SentesTe_19264 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
Length = 754
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 380 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 439
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I + +L+++ + N+ + + ++L ++P
Sbjct: 440 NAL-----PQGWVNIDNRWQWLTFLPWLMLIAWRLNV-WRTWPAVCLCGLLLMSWPLWRP 493
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 494 ----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLT 549
Query: 276 EKN 278
+
Sbjct: 550 PEG 552
>gi|282880794|ref|ZP_06289490.1| ComEC/Rec2-like protein [Prevotella timonensis CRIS 5C-B1]
gi|281305328|gb|EFA97392.1| ComEC/Rec2-like protein [Prevotella timonensis CRIS 5C-B1]
Length = 414
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 58/158 (36%), Gaps = 9/158 (5%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D +F + + AI Y + W + SS + + ++
Sbjct: 248 LWDVSFQLSFMAVLAILILY------HPIYHLLPLHWLQCSSFIRLLWGMMTVSVAAQIG 301
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + +F Y L N++A+P+ +F++ A L+ +L NI VMAW
Sbjct: 302 --TAPLVAYYFGRFSCYFLFTNLIAVPLTTFILYTACLVFMLSFWTLAQNIVAKVMAWTA 359
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
+ I+ + I T+ + + L+
Sbjct: 360 QCLNQQLSVIASWTGA-SVENIHLTAIQVLAIYLLISC 396
>gi|73747979|ref|YP_307218.1| DNA internalization-related competence protein,ComEC
[Dehalococcoides sp. CBDB1]
gi|73659695|emb|CAI82302.1| DNA internalization-related competence protein,ComEC
[Dehalococcoides sp. CBDB1]
Length = 796
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Query: 75 SIKQSFLNEIRANIGTYGSASASIF--LIKHFHCIPVYGLIANILAIPILSFVVIPAGLI 132
I ++ L + + +A A I+ L+ +F I + G +A +LA+P + F+++ + L
Sbjct: 371 GIFRATLGLVLDGLAVSLAAIAGIWPVLLYYFENISLIGPVATLLAMPAMPFIIVLSFLT 430
Query: 133 AILLMILSLDNIPFGVMAW-GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
A+L ++ I G + W ++ + + G P + I L M+
Sbjct: 431 ALLGLVFPAGAIFMGYLTWLPCRYMLVVVSLTASVPGVLMSGLRPGAMLMGIYYFLLGML 490
Query: 192 FC 193
+
Sbjct: 491 YW 492
>gi|320085225|emb|CBY95010.1| Uncharacterized protein ycaI [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 754
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 380 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 439
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I + +L+++ + N+ + + ++L ++P
Sbjct: 440 NAL-----PQGWVNIDNRWQWLTFLPWLMLIAWRLNV-WRTWPAVCLCGLLLMSWPLWRP 493
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 494 ----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLT 549
Query: 276 EKN 278
+
Sbjct: 550 PEG 552
>gi|289431977|ref|YP_003461850.1| DNA internalization-related competence protein ComEC/Rec2
[Dehalococcoides sp. GT]
gi|288945697|gb|ADC73394.1| DNA internalization-related competence protein ComEC/Rec2
[Dehalococcoides sp. GT]
Length = 796
Score = 51.0 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Query: 75 SIKQSFLNEIRANIGTYGSASASIF--LIKHFHCIPVYGLIANILAIPILSFVVIPAGLI 132
I ++ L + + +A A I+ L+ +F I + G +A +LA+P + F+++ + L
Sbjct: 371 GIFRATLGLVLDGLAVSLAAIAGIWPVLLYYFENISLIGPVATLLAMPAMPFIIVLSFLT 430
Query: 133 AILLMILSLDNIPFGVMAW-GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
A+L ++ I G + W ++ + + G P + I L M+
Sbjct: 431 ALLGLVFPAGAIFMGYLTWLPCRYMLVVVSLTASVPGVLMSGLRPGAMLMGIYYFLLGML 490
Query: 192 FC 193
+
Sbjct: 491 YW 492
>gi|323492533|ref|ZP_08097681.1| ComEC/rec2 family protein [Vibrio brasiliensis LMG 20546]
gi|323313320|gb|EGA66436.1| ComEC/rec2 family protein [Vibrio brasiliensis LMG 20546]
Length = 746
Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/191 (12%), Positives = 75/191 (39%), Gaps = 12/191 (6%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
+ + + ++ +F + V + N+L +P S++V+P +A+ M+ +
Sbjct: 362 LQFALVIAMAPIVVYYFQGVSVGSVAYNLLFVPWFSWLVMPLAFVALSAMLAGVGTSWLW 421
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF-VTIVVEFLLMVFCKTNIRHIGSIMIG 206
+D ++ + + + +E+ ++ + + F+ + R +++
Sbjct: 422 ---SAVDWSLYPVNWM-LIRSEWGWYQLSQWQLKWLLTGLFVFSLLWLIR-RKAMLLIMS 476
Query: 207 ITIIILFTFPYSFSPDLLISEKG-NLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHE 265
+ ++ + + S L + G L +V+++ Y W+++ I
Sbjct: 477 MLVLSSINWSATPSWQLTTLDVGHGLAVVVEQDEQALLYDTGAG-----WETSSIAEQVI 531
Query: 266 APHVQKEDLQE 276
P++ ++ +
Sbjct: 532 TPYLIQQGIDN 542
>gi|241662663|ref|YP_002981023.1| DNA internalization-like competence protein ComEC/Rec2 [Ralstonia
pickettii 12D]
gi|240864690|gb|ACS62351.1| DNA internalization-related competence protein ComEC/Rec2
[Ralstonia pickettii 12D]
Length = 839
Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 48/177 (27%), Gaps = 7/177 (3%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHF 104
G AI + + + + W ++ + G F
Sbjct: 383 GAVAIIFIAAQMALDGHRSENAGWVGATRRALAGGTRIQFAVTFGLLPLTLLL------F 436
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS 164
V AN LAIP +SFV P LI L L + ++ ++
Sbjct: 437 QQTSVVSAAANGLAIPAVSFVTTPLALIGAAL-PDPLAQPVLELAEASFRWLVVWLEWLA 495
Query: 165 VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ V + + + ++ +R G +++ P
Sbjct: 496 TPRWSVWVAPAGPIWAVLLSMVAVALLLMPGGLRAWAWRAQGALLLLPLVLAREPLP 552
>gi|205360686|ref|ZP_03224692.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
gi|205347803|gb|EDZ34434.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
Length = 737
Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 363 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 422
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I + +L+++ + N+ + + ++L ++P
Sbjct: 423 NAL-----PQGWVNIDNRWQWLTFLPWLMLIAWRLNV-WRTWPAVCLCGLLLMSWPLWRP 476
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 477 ----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLT 532
Query: 276 EKN 278
+
Sbjct: 533 PEG 535
>gi|200390993|ref|ZP_03217604.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|199603438|gb|EDZ01984.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
Length = 737
Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 363 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 422
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I + +L+++ + N+ + + ++L ++P
Sbjct: 423 NAL-----PQGWVNIDNRWQWLTFLPWLMLIAWRLNV-WRTWPAVCLCGLLLMSWPLWRP 476
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 477 ----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLT 532
Query: 276 EKN 278
+
Sbjct: 533 PEG 535
>gi|171321906|ref|ZP_02910799.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia ambifaria MEX-5]
gi|171092803|gb|EDT38073.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia ambifaria MEX-5]
Length = 829
Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/220 (13%), Positives = 70/220 (31%), Gaps = 10/220 (4%)
Query: 30 AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT-------WTWKKISSIKQSFLN 82
F +F + + A+ + ++ + +S W + +
Sbjct: 367 VLSAGFWLSFGAVAVILMAVAGWRAVREFDGGDDSAPDGAAAFDRWRRLRTWCARAGRRI 426
Query: 83 EIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD 142
+ + + F I V G + N AIP +S VV P ++A + + LD
Sbjct: 427 AEATRVQYAVTLGLAPLTAAWFAQISVSGPLGNAFAIPWVSSVVTPI-VLAGIGLPAPLD 485
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV-VEFLLMVFCKTN-IRHI 200
F + L+ ++ + ++ R+P + + V + + +R
Sbjct: 486 AYAFRLAHAALEPMMALLRHLADWPAGVFWLRMPGWPVLVLACVGVGWALMPRGWPLRWA 545
Query: 201 GSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ + P L + + G +++ +
Sbjct: 546 APLTWLPLVAPAPDAPPPGGFRLTVLDVGQGASVLVETAR 585
>gi|197300920|ref|ZP_03166236.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197289753|gb|EDY29114.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 664
Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 290 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 349
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I + +L+++ + N+ + + ++L ++P
Sbjct: 350 NAL-----PQGWVNIDNRWQCLTFLPWLMLIAWRLNV-WRTWPAVCLCGLLLMSWPLWRP 403
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 404 ----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLT 459
Query: 276 EKN 278
+
Sbjct: 460 PEG 462
>gi|327393336|dbj|BAK10758.1| DNA Internalization-related competence YcaI [Pantoea ananatis
AJ13355]
Length = 751
Score = 51.0 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 17/130 (13%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F+ I + LIAN+LAIP++SFV +P L+A+LL + +L + L ++
Sbjct: 376 PLQAGLFNGISITALIANLLAIPVVSFVTVPLILVAMLLPVPALSTWFWLAADGSLRFLL 435
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRH-----IGSIMIGITIIIL 212
+ +P + F +++ + I +
Sbjct: 436 ------------TSLALLPPGWWPLQGAAFFMLMVWGGLLVWRTGALFSLPWSCSAIALA 483
Query: 213 FTFPYSFSPD 222
F + P+
Sbjct: 484 MVFSRHYKPE 493
>gi|194472723|ref|ZP_03078707.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|205358697|ref|ZP_03224107.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|194459087|gb|EDX47926.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|205332427|gb|EDZ19191.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
Length = 737
Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 363 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 422
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I + +L+++ + N+ + + ++L ++P
Sbjct: 423 NAL-----PQGWVNIDNRWQWLTFLPWLMLIAWRLNV-WRTWPAVCLCGLLLMSWPLWRP 476
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 477 ----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLT 532
Query: 276 EKN 278
+
Sbjct: 533 PEG 535
>gi|205357313|ref|ZP_03223712.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205322488|gb|EDZ10327.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
Length = 737
Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 363 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 422
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I + +L+++ + N+ + + ++L ++P
Sbjct: 423 NAL-----PQGWVNIDNRWQWLTFLPWLMLIAWRLNV-WRTWPAVCLCGLLLMSWPLWRP 476
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 477 ----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLT 532
Query: 276 EKN 278
+
Sbjct: 533 PEG 535
>gi|205360022|ref|ZP_03224496.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Weltevreden
str. HI_N05-537]
gi|205341493|gb|EDZ28257.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Weltevreden
str. HI_N05-537]
Length = 737
Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 363 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 422
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I + +L+++ + N+ + + ++L ++P
Sbjct: 423 NAL-----PQGWVNIDNRWQWLTFLPWLMLIAWRLNV-WRTWPAVCLCGLLLMSWPLWRP 476
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 477 ----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLT 532
Query: 276 EKN 278
+
Sbjct: 533 PEG 535
>gi|221134262|ref|ZP_03560567.1| DNA internalization-related competence protein ComEC/Rec2
[Glaciecola sp. HTCC2999]
Length = 702
Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 66/156 (42%), Gaps = 17/156 (10%)
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIK--HFHCIPVYGLIANILAIPILSFVVIPAG 130
+S +S +++ A I + + +F I F I + ++AN+ AIPI++ ++P G
Sbjct: 267 LSKSVRSLWDKVMAFIMIQIALTILLFPINIVVFGQIFPWSILANLWAIPIVTLFLVPVG 326
Query: 131 LIAILLMIL-------SLDNI---PFGVMAWGLDIIIHIAHRIS---VAHNEFCIGRIP- 176
++ + + ++ S D+I ++ G + +I H ++ + F I
Sbjct: 327 MMLLCVYLIKIQYDISSFDSIINGGMWLLNMGFNGLISGLHMMTQFPILSTVFAPVNISL 386
Query: 177 -ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
V +++ ++ R G ++ I +
Sbjct: 387 DPVWCVALLMGIVVFFVFYKQWRLWGWCLLLIPAGM 422
>gi|313618874|gb|EFR90744.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
innocua FSL S4-378]
Length = 454
Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 74/179 (41%), Gaps = 7/179 (3%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F ++ + Y S + + + + F+ + I + +S
Sbjct: 12 SFILFFIIQPHVIYEVGFQLSYVVSFGIILSSRQILVRQQSPFVKSL--TISFISTMMSS 69
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDI 155
+ ++ HF+ G+ N+L +P+ + +V+P L LL I+S L IP ++ + + +
Sbjct: 70 VVMMYHFYSFSWVGIFFNLLYVPLFTIIVLPGCLGVFLLSIISPTLMKIPEYMLTFLIQL 129
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
+ + + + ++ I P T + +++ +L+ F + + IGI I
Sbjct: 130 MESLTNLFAKIPHQTIITGRPNTIMLVLIIATILLFFYQWQKKQF---PIGIFICFCLL 185
>gi|16800585|ref|NP_470853.1| hypothetical protein lin1517 [Listeria innocua Clip11262]
gi|16413990|emb|CAC96748.1| comEC [Listeria innocua Clip11262]
Length = 746
Score = 50.6 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 74/179 (41%), Gaps = 7/179 (3%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F ++ + Y S + + + + F+ + I + +S
Sbjct: 304 SFILFFIIQPHVIYEVGFQLSYVVSFGIILSSRQILVRQQSPFVKSL--TISFISTMMSS 361
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDI 155
+ ++ HF+ G+ N+L +P+ + +V+P L LL I+S L IP ++ + + +
Sbjct: 362 VVMMYHFYSFSWVGIFFNLLYVPLFTIIVLPGCLGVFLLSIISPTLMKIPEYMLTFLIQL 421
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
+ + + + ++ I P T + +++ +L+ F + + IGI I
Sbjct: 422 MESLTNLFAKIPHQTIITGRPNTIMLVLIIATILLFFYQWQKKQF---PIGIFICFCLL 477
>gi|322649607|gb|EFY46038.1| hypothetical protein SEEM675_15964 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322654091|gb|EFY50414.1| hypothetical protein SEEM965_12787 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
Length = 724
Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 350 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 409
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I + +L+++ + N+ + + ++L ++P
Sbjct: 410 NAL-----PQGWVNIDNRWQCLTFLPWLMLIAWRLNV-WRTWPAVCLCGLLLMSWPLWRP 463
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 464 ----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLT 519
Query: 276 EKN 278
+
Sbjct: 520 PEG 522
>gi|91204982|ref|YP_537337.1| ComEC/Rec2 family protein [Rickettsia bellii RML369-C]
gi|91068526|gb|ABE04248.1| ComEC/Rec2 family protein [Rickettsia bellii RML369-C]
Length = 393
Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 2 LSITKKY-DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+SI KKY I +A+L P PG +DF F +Y I A GY S PK+I
Sbjct: 135 ISIPKKYLQKVRVNDYIALLAKLYKPQNSILPGGYDFGFYAYLADIGANGYAMSEPKIIA 194
>gi|304316629|ref|YP_003851774.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302778131|gb|ADL68690.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 760
Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 55/139 (39%), Gaps = 2/139 (1%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
++ I FH + + L+ NI+ +PI+S VI L A++ +I S I
Sbjct: 361 VVSVTVAAQLGTIPITIYSFHNLSIISLLPNIIIVPIVSIAVILGFLSALIGLIFSPLAI 420
Query: 145 PFGVMAWGL-DIIIHIAHRISVAHNEFCIGRIPETSFVTI-VVEFLLMVFCKTNIRHIGS 202
++ + ++I+ + + + +P + L+M+ + I +
Sbjct: 421 ILNMINTPIVELILFLTKIFAEIPHASINVSVPPFYMIIFYYTALLIMISSLSKINKLKV 480
Query: 203 IMIGITIIILFTFPYSFSP 221
I++ + + F + P
Sbjct: 481 ILLILVTSMTILFVNTLIP 499
>gi|261821320|ref|YP_003259426.1| hypothetical protein Pecwa_2040 [Pectobacterium wasabiae WPP163]
gi|261605333|gb|ACX87819.1| DNA internalization-related competence protein ComEC/Rec2
[Pectobacterium wasabiae WPP163]
Length = 763
Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/193 (12%), Positives = 72/193 (37%), Gaps = 15/193 (7%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIP 145
++ T + + FH + + L AN+ A+P+++FV P L+A+ + S L +
Sbjct: 375 HLQTGITLLLMPLQLHIFHGVSITSLPANLWAVPLVTFVTTPLILLALSTIAFSPLSEML 434
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK-TNIRHIGSIM 204
+ + L ++ + + + + + + + + +V + + R +
Sbjct: 435 WWLADVSLRVV-----FAPLTYLQTGWVYLDASLLIGSIAGWGAVVIWRFSWWRCYPMSI 489
Query: 205 IGITIIILFTFPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALIT 261
+ +++L P+ ++ L ++++ Y W+ +
Sbjct: 490 GALILVLLVFRIKRDEPEWRVDMLDVGHGLAIVIEQRGKAVLYDTGNR-----WEGGDMA 544
Query: 262 PFHEAPHVQKEDL 274
P+++ +
Sbjct: 545 TREILPYLRWRGI 557
>gi|324113756|gb|EGC07731.1| competence protein [Escherichia fergusonii B253]
Length = 754
Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 54/125 (43%), Gaps = 9/125 (7%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS---LDNIPFGVMAWGLDIIIHIA 160
FH + + LIAN+ A+P+++F+ +P L +++ + L+ + + + L I+
Sbjct: 380 FHGLSLSSLIANLFAVPLVTFISVPLILAGMVIHLTGPQVLEQGLWYLADYSLAIL---- 435
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
++ I E + ++ + N + ++ IIL ++P +
Sbjct: 436 -FRALELLPGGWVNISEQWRWLAFSPWPGLLIWRLNA-WRAVPFLCLSGIILLSWPLWRA 493
Query: 221 PDLLI 225
P + I
Sbjct: 494 PRIDI 498
>gi|218548429|ref|YP_002382220.1| hypothetical protein EFER_1057 [Escherichia fergusonii ATCC 35469]
gi|218355970|emb|CAQ88586.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
Length = 754
Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 54/125 (43%), Gaps = 9/125 (7%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS---LDNIPFGVMAWGLDIIIHIA 160
FH + + LIAN+ A+P+++F+ +P L +++ + L+ + + + L I+
Sbjct: 380 FHGLSLSSLIANLFAVPLVTFISVPLILAGMVIHLTGPQVLEQGLWYLADYSLAIL---- 435
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
++ I E + ++ + N + ++ IIL ++P +
Sbjct: 436 -FRALELLPGGWVNISEQWRWLAFSPWPGLLIWRLNA-WRAVPFLCLSGIILLSWPLWRA 493
Query: 221 PDLLI 225
P + I
Sbjct: 494 PRIDI 498
>gi|312110157|ref|YP_003988473.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. Y4.1MC1]
gi|311215258|gb|ADP73862.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. Y4.1MC1]
Length = 761
Score = 50.6 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 49/138 (35%), Gaps = 5/138 (3%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM---ILSLDN 143
SA FL+ +F + ++ L N++ +P+ SFV++P + ++L
Sbjct: 357 FTTFIAQLSALPFLLYYFFEVSLWSLPLNVIFVPLYSFVILPLSIASLLAYYAHPF-FSI 415
Query: 144 IPFGVMAWGLDIIIHI-AHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
++ + I I A S +GR V V LL R++
Sbjct: 416 PFMWLLQKIIVISSDIVALFSSSRSLSLILGRPSFFFLVCYAVAILLAFVQMERKRYLSL 475
Query: 203 IMIGITIIILFTFPYSFS 220
+ + I PY
Sbjct: 476 GWVALVIAFHAFSPYMDR 493
>gi|15837680|ref|NP_298368.1| DNA uptake protein [Xylella fastidiosa 9a5c]
gi|9106028|gb|AAF83888.1|AE003944_5 DNA uptake protein [Xylella fastidiosa 9a5c]
Length = 836
Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 40/112 (35%), Gaps = 3/112 (2%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNI 144
+ + F + F + G AN++AIP+ +FVV+P L+ L L +
Sbjct: 421 SAQGVATLGLLPFTVALFGQVSFVGPFANLIAIPLWTFVVVPLALLGTALEALVPGWGSP 480
Query: 145 PFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + + + ++ + + + ++ ++ +
Sbjct: 481 MWRLGGTCFEWSWQLFEYLAQTDFALWWLPESDGVALWLALLGAFWLLLPRG 532
Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 60/186 (32%), Gaps = 5/186 (2%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSI--PKMIYSSESHNTWTW 70
A + + RL P PG FD + +GI A GY + + + ++ N W
Sbjct: 184 AGSVWQLHVRLRAPHSLLNPGGFDSERYALAQGIVATGYVRAPTMAREVAAATGINAWRE 243
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ I + L+E + + + + GL +++AI ++
Sbjct: 244 RMSVRIADAVLSEASVYLRALALGDTRGLSQQDWEVLRATGL-THLIAISGFHVGMVAGA 302
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
++ ++ L L + IA + + +P + + + +
Sbjct: 303 CALLVSLLWRLFPHLAWRCPRPL-AMALIAVPAAAGYTVLAGASLPTVRTALM-IGIVAL 360
Query: 191 VFCKTN 196
Sbjct: 361 ARLTRR 366
>gi|332981262|ref|YP_004462703.1| DNA internalization-related competence protein ComEC/Rec2 [Mahella
australiensis 50-1 BON]
gi|332698940|gb|AEE95881.1| DNA internalization-related competence protein ComEC/Rec2 [Mahella
australiensis 50-1 BON]
Length = 769
Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 56/148 (37%), Gaps = 10/148 (6%)
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI 132
++ L EI A + + +F+ IP L+ANI IP F+ + ++
Sbjct: 361 LARFMPKALAEICAAT-LAPQIATLPIIAYYFNQIPTLSLLANIAIIPFNGFIFLAGLVL 419
Query: 133 AIL--LMILSLD--NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL 188
+ L L+ + P ++ ++I +++A + +P S IV ++
Sbjct: 420 SALGALLPVVASTIAYPLYIILRSVNI-----FTLAMAGIPWVAINVPSPSIPLIVAYYI 474
Query: 189 LMVFCKTNIRHIGSIMIGITIIILFTFP 216
+ R + I + ++F
Sbjct: 475 TICAVFLWRRMSRRQVTSIAVALVFIIA 502
>gi|322616413|gb|EFY13322.1| hypothetical protein SEEM315_12428 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322619663|gb|EFY16538.1| hypothetical protein SEEM971_17422 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322622641|gb|EFY19486.1| hypothetical protein SEEM973_13535 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629790|gb|EFY26565.1| hypothetical protein SEEM974_05236 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632488|gb|EFY29234.1| hypothetical protein SEEM201_14795 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322637017|gb|EFY33720.1| hypothetical protein SEEM202_02140 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322641443|gb|EFY38081.1| hypothetical protein SEEM954_01443 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322646091|gb|EFY42607.1| hypothetical protein SEEM054_01090 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322658623|gb|EFY54885.1| hypothetical protein SEEM19N_16652 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663480|gb|EFY59682.1| hypothetical protein SEEM801_11942 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322670216|gb|EFY66356.1| hypothetical protein SEEM507_18719 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322671452|gb|EFY67574.1| hypothetical protein SEEM877_09728 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322676808|gb|EFY72875.1| hypothetical protein SEEM867_07876 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682733|gb|EFY78752.1| hypothetical protein SEEM180_06927 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322686412|gb|EFY82394.1| hypothetical protein SEEM600_05905 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323195935|gb|EFZ81102.1| hypothetical protein SEEM581_13191 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323199777|gb|EFZ84866.1| hypothetical protein SEEM501_09303 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323202770|gb|EFZ87806.1| hypothetical protein SEEM460_08239 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323209041|gb|EFZ93978.1| hypothetical protein SEEM020_20005 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323211517|gb|EFZ96356.1| hypothetical protein SEEM6152_19293 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323217998|gb|EGA02713.1| hypothetical protein SEEM0077_06184 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323226703|gb|EGA10899.1| hypothetical protein SEEM0055_22791 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323229800|gb|EGA13923.1| hypothetical protein SEEM0052_13217 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233025|gb|EGA17121.1| hypothetical protein SEEM3312_03169 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323240760|gb|EGA24802.1| hypothetical protein SEEM5258_12779 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323243076|gb|EGA27097.1| hypothetical protein SEEM1156_20629 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323249761|gb|EGA33663.1| ComEC family competence protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323252766|gb|EGA36604.1| ComEC family competence protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323254796|gb|EGA38597.1| ComEC family competence protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323260003|gb|EGA43631.1| hypothetical protein SEEM8284_18128 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323267996|gb|EGA51475.1| ComEC family competence protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323269843|gb|EGA53292.1| ComEC family competence protein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 754
Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 380 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 439
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I + +L+++ + N+ + + ++L ++P
Sbjct: 440 NAL-----PQGWVNIDNRWQCLTFLPWLMLIAWRLNV-WRTWPAVCLCGLLLMSWPLWRP 493
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 494 ----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLT 549
Query: 276 EKN 278
+
Sbjct: 550 PEG 552
>gi|194735838|ref|YP_002114034.1| hypothetical protein SeSA_A1097 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|194711340|gb|ACF90561.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
Length = 756
Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 382 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 441
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I + +L+++ + N+ + + ++L ++P
Sbjct: 442 NAL-----PQGWVNIDNRWQCLTFLPWLMLIAWRLNV-WRTWPAVCLCGLLLMSWPLWRP 495
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 496 ----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLT 551
Query: 276 EKN 278
+
Sbjct: 552 PEG 554
>gi|326201893|ref|ZP_08191763.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium papyrosolvens DSM 2782]
gi|325987688|gb|EGD48514.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium papyrosolvens DSM 2782]
Length = 785
Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 73/202 (36%), Gaps = 33/202 (16%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + ++ FY K + + + + A +G
Sbjct: 340 LFDIGFQLSFGATLSLVLFYPRIKSFTEGKYIPNV-------VSDTLAATVAAQLGVI-- 390
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM---- 149
+ +F+ + +I+NIL +P++ FV I I +++ L NI V+
Sbjct: 391 ----PVTLYYFNNFSTFSIISNILVVPLVEFVTI----IGFIMVFTGLLNIYLAVIIGYI 442
Query: 150 -AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV-FCKTN--------IRH 199
L I+ I + F + ++P + ++ +L ++ K +H
Sbjct: 443 NNTFLSFILFITEVTAKIP--FSLLKLPTPTLGMVLFYYLFIIYMFKGRNYFKVKKYTKH 500
Query: 200 IGSIMIGITIIILFTFPYSFSP 221
+ ++ +TIII P
Sbjct: 501 LKRAVVILTIIIFGAKALIPKP 522
>gi|311031603|ref|ZP_07709693.1| Late competence protein ComEC (membrane metal-binding protein and
hydrolase of the metallo-beta-lactamase superfamily)
[Bacillus sp. m3-13]
Length = 704
Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/204 (15%), Positives = 79/204 (38%), Gaps = 36/204 (17%)
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
+ I Q F+ + A + ++ L+ HF+ + + N++ +P S V+P +
Sbjct: 292 NGIAQLFIVSMIAQV------ASLPLLLHHFYQFSFWSPLLNVIFVPFYSLYVLPISFLL 345
Query: 134 ILLMILSLDNIPF--GVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
++ LS +++ ++++ L+ + +A RI+ + P ++ + L V
Sbjct: 346 FFVLFLSPEHVTLIVPLLSYPLEYMNFLALRIAEIPLGTLVFGKPNP---ILMAAYCLAV 402
Query: 192 -----FCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT------- 239
+ N R +G+I++ ++ + Y ++ G +V L
Sbjct: 403 VFFFYMWEINKRWLGTIVLLTGLVFQWNIDY-------VNPYGKVVVLDIGQGDAIYISL 455
Query: 240 ------LISNYSNPPSFIFSQWKS 257
+ + +F +WK
Sbjct: 456 PFYKGDYLIDTGGAFTFPQEEWKE 479
>gi|172061066|ref|YP_001808718.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia ambifaria MC40-6]
gi|171993583|gb|ACB64502.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia ambifaria MC40-6]
Length = 833
Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/220 (13%), Positives = 71/220 (32%), Gaps = 10/220 (4%)
Query: 30 AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT-------WTWKKISSIKQSFLN 82
F +F + + A+ + ++ + +S W + +
Sbjct: 371 VLSAGFWLSFGAVAVILMAVAGWRAVREFDGGDDSAPDGAAAADRWRRPRAWCTRAGRRI 430
Query: 83 EIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD 142
+ + + F I V G + N AIP +S VV P ++A + + LD
Sbjct: 431 AEATRVQYAVTLGLAPLTAAWFAQISVSGPLGNAFAIPWVSSVVTPI-VLAGIGLPAPLD 489
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV-VEFLLMVFCKTN-IRHI 200
F + L+ ++ + ++ R+P+ + + V + + +R
Sbjct: 490 AYAFRLAHAALEPMMALLRHLADWPAGVFWLRMPDWPVLVLACVGVGWALMPRGWPLRWA 549
Query: 201 GSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ + P L + + G +++ +
Sbjct: 550 APLTWLPLVAPAPDAPPPGGFRLTVLDVGQGASVLIETAR 589
>gi|314978349|gb|EFT22443.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL072PA2]
Length = 762
Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/204 (12%), Positives = 65/204 (31%), Gaps = 15/204 (7%)
Query: 46 ISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFH 105
+ ++G++ S+ W+ ++ + + + +
Sbjct: 326 VGSVGFWLSVCATAGILWWAQPWS---VAMEWAPAWLAVGVTVPWAAQVTTQPVITWMAG 382
Query: 106 CIPVYGLIANILAIPIL---SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
+ GL+AN+ A P + S + + GL+A + + L + + W + II IAH
Sbjct: 383 TVSTTGLVANLAAAPFVPPASTLGMVTGLLAFIWLPLGM--PFGRLAGWCVQPIIWIAHF 440
Query: 163 ISVAHNEFCIGRIPETSFVTIV-----VEFLLMVFCKTNI--RHIGSIMIGITIIILFTF 215
+ A + + + + + G +I ++
Sbjct: 441 GAKAPSGLIRWPAGGWALGVLAGLCMGLALITPTVLAKPWLTALAGLAVIAAMVVRPPLP 500
Query: 216 PYSFSPDLLISEKGNLVALVDKNT 239
+ + I + G A + +
Sbjct: 501 GWPGQWQVAICDVGQGSAALVRAG 524
>gi|304397073|ref|ZP_07378952.1| DNA internalization-related competence protein ComEC/Rec2 [Pantoea
sp. aB]
gi|304355222|gb|EFM19590.1| DNA internalization-related competence protein ComEC/Rec2 [Pantoea
sp. aB]
Length = 751
Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 46/114 (40%), Gaps = 7/114 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F+ I + L+AN++AIP++SF+ +P A+LL I + +G + + H +
Sbjct: 382 FNGISLTALLANLVAIPVISFITMPLITFALLLPIAPVSGFFWGAADLSVRALF---HCL 438
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
++ + T F +V ++ + + + + +
Sbjct: 439 ALLPPGWW-PLSGTTWFTIMVWGS--LILWRAQF-FFSLPLSSFVLALAMIWSR 488
>gi|332675294|gb|AEE72110.1| putative ComE operon protein 3 [Propionibacterium acnes 266]
Length = 764
Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/204 (12%), Positives = 65/204 (31%), Gaps = 15/204 (7%)
Query: 46 ISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFH 105
+ ++G++ S+ W+ ++ + + + +
Sbjct: 328 VGSVGFWLSVCATAGILWWAQPWS---VAMEWAPAWLAVGVTVPWAAQVTTQPVITWMAG 384
Query: 106 CIPVYGLIANILAIPIL---SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
+ GL+AN+ A P + S + + GL+A + + L + + W + II IAH
Sbjct: 385 TVSTTGLVANLAAAPFVPPASTLGMVTGLLAFIWLPLGM--PFGRLAGWCVQPIIWIAHF 442
Query: 163 ISVAHNEFCIGRIPETSFVTIV-----VEFLLMVFCKTNI--RHIGSIMIGITIIILFTF 215
+ A + + + + + G +I ++
Sbjct: 443 GAKAPSGLIRWPAGGWALGVLAGLCMGLALITPTVLAKPWLTALAGLAVIAAMVVRPPLP 502
Query: 216 PYSFSPDLLISEKGNLVALVDKNT 239
+ + I + G A + +
Sbjct: 503 GWPGQWQVAICDVGQGSAALVRAG 526
>gi|289427084|ref|ZP_06428800.1| ComEC/Rec2-like protein [Propionibacterium acnes J165]
gi|295130457|ref|YP_003581120.1| ComEC/Rec2-like protein [Propionibacterium acnes SK137]
gi|289159553|gb|EFD07741.1| ComEC/Rec2-like protein [Propionibacterium acnes J165]
gi|291375645|gb|ADD99499.1| ComEC/Rec2-like protein [Propionibacterium acnes SK137]
gi|313772362|gb|EFS38328.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL074PA1]
gi|313807373|gb|EFS45860.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL087PA2]
gi|313809882|gb|EFS47603.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL083PA1]
gi|313818421|gb|EFS56135.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL046PA2]
gi|313825063|gb|EFS62777.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL063PA1]
gi|313830795|gb|EFS68509.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL007PA1]
gi|313834013|gb|EFS71727.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL056PA1]
gi|314960143|gb|EFT04245.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL002PA2]
gi|314973220|gb|EFT17316.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL053PA1]
gi|314975892|gb|EFT19987.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL045PA1]
gi|314983640|gb|EFT27732.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL005PA1]
gi|314987588|gb|EFT31679.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL005PA2]
gi|314990073|gb|EFT34164.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL005PA3]
gi|315080790|gb|EFT52766.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL078PA1]
gi|315084459|gb|EFT56435.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL027PA2]
gi|315085799|gb|EFT57775.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL002PA3]
gi|315096129|gb|EFT68105.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL038PA1]
gi|327326048|gb|EGE67838.1| putative ComE operon protein 3 [Propionibacterium acnes HL096PA2]
gi|327332080|gb|EGE73817.1| putative ComE operon protein 3 [Propionibacterium acnes HL096PA3]
gi|327443285|gb|EGE89939.1| putative DNA internalization competence protein ComEC/Rec2
[Propionibacterium acnes HL013PA2]
gi|327446069|gb|EGE92723.1| putative DNA internalization competence protein ComEC/Rec2
[Propionibacterium acnes HL043PA2]
gi|327447949|gb|EGE94603.1| putative DNA internalization competence protein ComEC/Rec2
[Propionibacterium acnes HL043PA1]
gi|328753611|gb|EGF67227.1| putative DNA internalization competence protein ComEC/Rec2
[Propionibacterium acnes HL020PA1]
gi|328760451|gb|EGF74019.1| putative ComE operon protein 3 [Propionibacterium acnes HL099PA1]
Length = 762
Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/204 (12%), Positives = 65/204 (31%), Gaps = 15/204 (7%)
Query: 46 ISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFH 105
+ ++G++ S+ W+ ++ + + + +
Sbjct: 326 VGSVGFWLSVCATAGILWWAQPWS---VAMEWAPAWLAVGVTVPWAAQVTTQPVITWMAG 382
Query: 106 CIPVYGLIANILAIPIL---SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
+ GL+AN+ A P + S + + GL+A + + L + + W + II IAH
Sbjct: 383 TVSTTGLVANLAAAPFVPPASTLGMVTGLLAFIWLPLGM--PFGRLAGWCVQPIIWIAHF 440
Query: 163 ISVAHNEFCIGRIPETSFVTIV-----VEFLLMVFCKTNI--RHIGSIMIGITIIILFTF 215
+ A + + + + + G +I ++
Sbjct: 441 GAKAPSGLIRWPAGGWALGVLAGLCMGLALITPTVLAKPWLTALAGLAVIAAMVVRPPLP 500
Query: 216 PYSFSPDLLISEKGNLVALVDKNT 239
+ + I + G A + +
Sbjct: 501 GWPGQWQVAICDVGQGSAALVRAG 524
>gi|146296058|ref|YP_001179829.1| DNA internalization-related competence protein ComEC/Rec2
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145409634|gb|ABP66638.1| DNA internalization-related competence protein ComEC/Rec2
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 751
Score = 50.2 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
++ + A + + +F + + + N++A+P+ +V P GL+ +L++
Sbjct: 365 ISSLCAVSVSAQILILPLLA-YYFCEVSLISFLTNLIAVPLAGALV-PIGLVYYILLLFG 422
Query: 141 LDNIPF-GVMAWGLDIIIHIAH 161
+D I V+ + ++I ++
Sbjct: 423 IDFIVLKWVLLVIVKVLIWVSQ 444
>gi|94967171|ref|YP_589219.1| DNA internalization-related competence protein ComEC/Rec2
[Candidatus Koribacter versatilis Ellin345]
gi|94549221|gb|ABF39145.1| DNA internalization-related competence protein ComEC/Rec2
[Candidatus Koribacter versatilis Ellin345]
Length = 868
Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 52/152 (34%), Gaps = 7/152 (4%)
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ +F + + ++ + +FH + + +AN L +P+ V++PA A+L
Sbjct: 456 FRVTFAAYELLLVSLLMEFTLALPMAVYFHRVTLMAPVANALVVPLTG-VLMPACAAAVL 514
Query: 136 LMILSLDNIPFGVMAWGLDIIIHIAHRISVA-HNEFCIGRIPETSFVTIVVE----FLLM 190
L + L M L + I ++V H GR+ S V + L M
Sbjct: 515 LGFVWLRLARLPAM-VALWSLKAITGAVAVLGHLRVSTGRVATPSLVVALSAAVAIALAM 573
Query: 191 VFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
+ + + I P
Sbjct: 574 LLARRRCWLAAVGSLAIIASGAAVLFIVPQPQ 605
>gi|289425534|ref|ZP_06427311.1| ComEC/Rec2-like protein [Propionibacterium acnes SK187]
gi|289154512|gb|EFD03200.1| ComEC/Rec2-like protein [Propionibacterium acnes SK187]
gi|313764600|gb|EFS35964.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL013PA1]
gi|313792290|gb|EFS40391.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL110PA1]
gi|313801761|gb|EFS42995.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL110PA2]
gi|313816137|gb|EFS53851.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL059PA1]
gi|313827960|gb|EFS65674.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL063PA2]
gi|313838591|gb|EFS76305.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL086PA1]
gi|314915594|gb|EFS79425.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL005PA4]
gi|314919939|gb|EFS83770.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL050PA3]
gi|314931953|gb|EFS95784.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL067PA1]
gi|314955820|gb|EFT00220.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL027PA1]
gi|314958302|gb|EFT02405.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL002PA1]
gi|314962949|gb|EFT07049.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL082PA1]
gi|315077592|gb|EFT49648.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL053PA2]
gi|315098393|gb|EFT70369.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL059PA2]
gi|315101251|gb|EFT73227.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL046PA1]
gi|315108475|gb|EFT80451.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL030PA2]
gi|327450923|gb|EGE97577.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL087PA3]
gi|327452998|gb|EGE99652.1| putative DNA internalization competence protein ComEC/Rec2
[Propionibacterium acnes HL092PA1]
gi|327453727|gb|EGF00382.1| putative DNA internalization competence protein ComEC/Rec2
[Propionibacterium acnes HL083PA2]
gi|328754345|gb|EGF67961.1| putative DNA internalization competence protein ComEC/Rec2
[Propionibacterium acnes HL087PA1]
gi|328754925|gb|EGF68541.1| putative DNA internalization competence protein ComEC/Rec2
[Propionibacterium acnes HL025PA2]
Length = 762
Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/204 (12%), Positives = 65/204 (31%), Gaps = 15/204 (7%)
Query: 46 ISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFH 105
+ ++G++ S+ W+ ++ + + + +
Sbjct: 326 VGSVGFWLSVCATAGILWWAQPWS---VAMEWAPAWLAVGVTVPWAAQVTTQPVITWMAG 382
Query: 106 CIPVYGLIANILAIPIL---SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
+ GL+AN+ A P + S + + GL+A + + L + + W + II IAH
Sbjct: 383 TVSTTGLVANLAAAPFVPPASTLGMVTGLLAFIWLPLGM--PFGRLAGWCVQPIIWIAHF 440
Query: 163 ISVAHNEFCIGRIPETSFVTIV-----VEFLLMVFCKTNI--RHIGSIMIGITIIILFTF 215
+ A + + + + + G +I ++
Sbjct: 441 GAKAPSGLIRWPAGGWALGVLAGLCMGLALITPTVLAKPWLTALAGLAVIAAMVVRPPLP 500
Query: 216 PYSFSPDLLISEKGNLVALVDKNT 239
+ + I + G A + +
Sbjct: 501 GWPGQWQVAICDVGQGSAALVRAG 524
>gi|313820183|gb|EFS57897.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL036PA1]
gi|313823009|gb|EFS60723.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL036PA2]
gi|314925412|gb|EFS89243.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL036PA3]
Length = 762
Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/204 (12%), Positives = 65/204 (31%), Gaps = 15/204 (7%)
Query: 46 ISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFH 105
+ ++G++ S+ W+ ++ + + + +
Sbjct: 326 VGSVGFWLSVCATAGILWWAQPWS---VAMEWAPAWLAVGVTVPWAAQVTTQPVITWMAG 382
Query: 106 CIPVYGLIANILAIPIL---SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
+ GL+AN+ A P + S + + GL+A + + L + + W + II IAH
Sbjct: 383 TVSTTGLVANLAAAPFVPPASTLGMVTGLLAFIWLPLGM--PFGRLAGWCVQPIIWIAHF 440
Query: 163 ISVAHNEFCIGRIPETSFVTIV-----VEFLLMVFCKTNI--RHIGSIMIGITIIILFTF 215
+ A + + + + + G +I ++
Sbjct: 441 GAKAPSGLIRWPAGGWALGVLAGLCMGLALITPTVLAKPWLTALAGLAVIAAMVVRPPLP 500
Query: 216 PYSFSPDLLISEKGNLVALVDKNT 239
+ + I + G A + +
Sbjct: 501 GWPGQWQVAICDVGQGSAALVRAG 524
>gi|159026475|emb|CAO86447.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 719
Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 61/173 (35%), Gaps = 23/173 (13%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
I S L+ F+ I +Y + NI+ P+++ + L + L L
Sbjct: 387 PVAISLAASLWTMPLLMFTFNSISLYNIPINIITTPLITLI----SLGGVFTAFLGLIYP 442
Query: 145 PFGVMAWGL-----DIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMV--FC-KT 195
P G + + +++ I H S+ + + G++ + I + L+ +
Sbjct: 443 PLGSIGASILYYPLKLLLQITHFFSLLPFSTYSTGKLSLGVMLIIYICLTLICCNLWFRQ 502
Query: 196 NIRHIGSIMIG----------ITIIILFTFPYSFSPDLLISEKGNLVALVDKN 238
+G ++ T+ + P ++I +GN + + +
Sbjct: 503 RWHLVGLFILTLILIPIIYQHFTLTQVTVLATKSQPVIIIQNRGNTLLINGEE 555
>gi|325496852|gb|EGC94711.1| hypothetical protein ECD227_0949 [Escherichia fergusonii ECD227]
Length = 754
Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 55/125 (44%), Gaps = 9/125 (7%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS---LDNIPFGVMAWGLDIIIHIA 160
FH + + LIAN+ A+P+++F+ +P L +++ + L+ + + + L I+
Sbjct: 380 FHGLSLSSLIANLFAVPLVTFISVPLILAGMVIHLTGPQVLEQGLWYLADYSLAIL---- 435
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
++ I E + +++ + N + ++ IIL ++P +
Sbjct: 436 -FRALELLPGGWVNISEQWRWLAFSPWPVLLIWRLNA-WRAVPFLCLSGIILLSWPLWRA 493
Query: 221 PDLLI 225
P + I
Sbjct: 494 PRIDI 498
>gi|67921015|ref|ZP_00514534.1| ComEC/Rec2-related protein [Crocosphaera watsonii WH 8501]
gi|67857132|gb|EAM52372.1| ComEC/Rec2-related protein [Crocosphaera watsonii WH 8501]
Length = 744
Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 67/163 (41%), Gaps = 25/163 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + + + A + E + K++ + + S
Sbjct: 359 GFKLSFLATFALLVASPFI----------EKKLDFLPPKLAGM---------IAVPIAVS 399
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAW 151
S ++ FH Y + NILA P++ +V+ G+I+ + +++ +L + ++ W
Sbjct: 400 IWTSPLIMYFFHSFSFYLIPFNILATPLIMLLVV-GGIISAVFILIIPNLGILIAKILFW 458
Query: 152 GLDIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
L I++ A +I + + F +G+I + + I +L+
Sbjct: 459 PLQILLQSAQQIPQLKLSAFAVGQISLVTLIIIYS--ILVTIW 499
>gi|313623712|gb|EFR93859.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
innocua FSL J1-023]
Length = 684
Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 74/179 (41%), Gaps = 7/179 (3%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F ++ + Y S + + + + F+ + I + +S
Sbjct: 242 SFILFFIIQPHVIYEVGFQLSYVVSFGIILSSRQILVRQQSPFVKSL--TISFISTMMSS 299
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDI 155
+ ++ HF+ G+ N+L +P+ + +V+P L LL I+S L IP ++ + + +
Sbjct: 300 VVMMYHFYSFSWVGIFFNLLYVPLFTIIVLPGCLGIFLLSIISPTLMKIPEYMLTFLIQL 359
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
+ + + + ++ I P T + +++ +L+ F + + +GI I
Sbjct: 360 MESLTNLFAKIPHQTIITGRPNTIMLVLIIATILLFFYQWQKKQF---PVGIFICFCLL 415
>gi|187928056|ref|YP_001898543.1| DNA internalization-related competence protein ComEC/Rec2
[Ralstonia pickettii 12J]
gi|187724946|gb|ACD26111.1| DNA internalization-related competence protein ComEC/Rec2
[Ralstonia pickettii 12J]
Length = 840
Score = 50.2 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/183 (13%), Positives = 54/183 (29%), Gaps = 7/183 (3%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + ++ I + + S++ + W + ++ + G
Sbjct: 378 FWLSFGAVAIIFIAAQMALDGHRSDNPDGWVERTRRALAGGTRIQFAVTFGLLPLTLLL- 436
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F V AN LAIP +SF+ P LI L L + ++
Sbjct: 437 -----FQQTSVVSAAANGLAIPAVSFMTTPLALIGAAL-PDPLAQPVLMLAEASFRWLVV 490
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
++ + + V + + + ++ +R G +++
Sbjct: 491 WLEWLAKPRWSVWVAPVGPMWAVLLSMVAVALLLVPGGLRAWVWRAQGALLLLPLVLARE 550
Query: 219 FSP 221
P
Sbjct: 551 PLP 553
>gi|186682068|ref|YP_001865264.1| ComEC/Rec2-related protein [Nostoc punctiforme PCC 73102]
gi|186464520|gb|ACC80321.1| ComEC/Rec2-related protein [Nostoc punctiforme PCC 73102]
Length = 784
Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/220 (14%), Positives = 78/220 (35%), Gaps = 34/220 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + I ++P ++ I+ + L + +
Sbjct: 376 GFQLSFLATLGLI------VTVPALVNRLVWLPPAIASLIAVPLAATLWTLPVQLSV--- 426
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-GVMAWG 152
F +P Y L+ N+++ P++S + I + A++ +I + V+ +
Sbjct: 427 ----------FGVVPSYSLLLNVVSTPLISIISIGGIISALVGLIWTQAGSFLAAVLHYP 476
Query: 153 LDIIIHIAHRISVAHN-EFCIGRIPETSFVTI--VVEFLLMV-FCKTNIRHIGSIMIGIT 208
D +I + S +G I + I ++ + +V + + I+IG+
Sbjct: 477 TDWLIKLVEFFSKLPGNSVAVGSISIWQLLAIYALIILVWLVPWWQRRWWVANVIVIGLV 536
Query: 209 IIILFTFPYS----------FSPDLLISEKGNLVALVDKN 238
I L+ + P +++ E+G + + +
Sbjct: 537 FIPLWHSTNTLFRITVLESGTEPIIVVQERGTVTVINSGD 576
>gi|220929374|ref|YP_002506283.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium cellulolyticum H10]
gi|219999702|gb|ACL76303.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium cellulolyticum H10]
Length = 786
Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 64/159 (40%), Gaps = 16/159 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + ++ FY K S+ I + + A +G
Sbjct: 341 LFDIGFQLSFGATLSLVMFYQQIKTFIDSKYIPGV-------ISDTLAATLAAQLGVV-- 391
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFV-VIPAGLIAILLMILSLDNIPFGVMAWG 152
+ +F+ + +++NIL +P++ V +I ++ L+ ++L I +
Sbjct: 392 ----PVTLYYFNNFSTFSILSNILVVPLVEVVTIIGFIMVFAGLLNINLAVIIGYINNTF 447
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
L I+ + S F + ++P +F ++ +LL++
Sbjct: 448 LSFILFVTEVTSKIP--FSLLKLPTPTFGMVLFYYLLLI 484
>gi|238898331|ref|YP_002924012.1| DNA internalization-related competence protein with
metallo-beta-lactamase domain [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
gi|229466090|gb|ACQ67864.1| DNA internalization-related competence protein with
metallo-beta-lactamase domain [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
Length = 773
Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 73/186 (39%), Gaps = 19/186 (10%)
Query: 38 NFSSYYKGISAIGYFYS-IPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+F ++A+ ++Y +P + + + W + + L + + +
Sbjct: 336 SFWLSCFAVAALIFWYQWVPLRLSENRTWYQWLRQLLMKWLHLQLGMMLLLLPIQVAL-- 393
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL--LMILSLDNIPFGVMAWGLD 154
FH I + LIAN+ A+PI+SF+ IPA L+A L + + +I + + + +
Sbjct: 394 -------FHGISLSSLIANLWAVPIISFITIPAILLAFLTTFIPF-IASIFWFLADFSIG 445
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
++ +S I + + +L ++ + +I + I +
Sbjct: 446 LVFSPLLFLSKGWL-----SISKAGQLISYSGWLAVIIWRFQF-WRSHHIISVVIFCILL 499
Query: 215 FPYSFS 220
+ ++
Sbjct: 500 WIFTER 505
>gi|115352199|ref|YP_774038.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia ambifaria AMMD]
gi|115282187|gb|ABI87704.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia ambifaria AMMD]
Length = 829
Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/220 (12%), Positives = 72/220 (32%), Gaps = 10/220 (4%)
Query: 30 AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT------WTWKKISSIKQSFLNE 83
F +F + + A+ + ++ + +S + + ++
Sbjct: 367 VLSAGFWLSFGAVAVILMAVAGWRAVREFDGGDDSAPDGAAAVDRRRRLRAGCTRAGRRI 426
Query: 84 IRAN-IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD 142
A + + + F I V G + N AIP +S VV P ++A + + LD
Sbjct: 427 AEATRVQYAVTLGLAPLTAAWFAQISVSGPLGNAFAIPWVSSVVTPI-VLAGIGLPAPLD 485
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV-VEFLLMVFCKTN-IRHI 200
F + L+ ++ + ++ +P+ + + V + + +R
Sbjct: 486 AYAFRLAHAALEPMMALLRHLADWPAGVFWLPMPDWPVLVLACVGVGWALMPRGWPLRWA 545
Query: 201 GSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ + P L + + G +++ +
Sbjct: 546 APLTWLPLVAPAPDAPPPGGFRLTVLDVGQGASVLVETAR 585
>gi|316940650|gb|ADU74684.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium thermocellum DSM 1313]
Length = 766
Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 76/200 (38%), Gaps = 32/200 (16%)
Query: 32 PGL-FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGT 90
PG F+ F + ++ FY+ K + + + I + + A IG
Sbjct: 328 PGNLFNIGFQLSFAATISLVLFYTNLKNMLNFGFLPEF-------ITDVLASTLAAQIGV 380
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMA 150
+ +F+ I + +++N++ P++ F+ I L+A+L + I ++
Sbjct: 381 L------PITVFYFNKISLISVLSNLIVAPVVEFITIMGSLMAVLG---QIHIIFSVLIG 431
Query: 151 WG----LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC-------KTNIR- 198
+ L ++ + + P V I F+L +F K N++
Sbjct: 432 YCNNALLSFVLFVTKTTAELPYSVITVSTPSVVLVIIYYIFILFLFWYKPKYKVKLNLKY 491
Query: 199 --HIGSIMIGITIIILFTFP 216
G++ + + I + F +P
Sbjct: 492 CVLAGAVSVAL-IAVSFLWP 510
>gi|125973124|ref|YP_001037034.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium thermocellum ATCC 27405]
gi|256003919|ref|ZP_05428905.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium thermocellum DSM 2360]
gi|125713349|gb|ABN51841.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium thermocellum ATCC 27405]
gi|255992047|gb|EEU02143.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium thermocellum DSM 2360]
Length = 778
Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 76/200 (38%), Gaps = 32/200 (16%)
Query: 32 PGL-FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGT 90
PG F+ F + ++ FY+ K + + + I + + A IG
Sbjct: 340 PGNLFNIGFQLSFAATISLVLFYTNLKNMLNFGFLPEF-------ITDVLASTLAAQIGV 392
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMA 150
+ +F+ I + +++N++ P++ F+ I L+A+L + I ++
Sbjct: 393 L------PITVFYFNKISLISVLSNLIVAPVVEFITIMGSLMAVLG---QIHIIFSVLIG 443
Query: 151 WG----LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC-------KTNIR- 198
+ L ++ + + P V I F+L +F K N++
Sbjct: 444 YCNNALLSFVLFVTKTTAELPYSVITVSTPSVVLVIIYYIFILFLFWYKPKYKVKLNLKY 503
Query: 199 --HIGSIMIGITIIILFTFP 216
G++ + + I + F +P
Sbjct: 504 CVLAGAVSVAL-IAVSFLWP 522
>gi|323222910|gb|EGA07260.1| hypothetical protein SEEM0047_13300 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
Length = 559
Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 64/183 (34%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 185 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 244
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I + +L+++ + N+ + ++++ +
Sbjct: 245 NAL-----PQGWVNIDNRWQCLTFLPWLMLIAWRLNVWRTWPAVCLCGLLLMSWPLWRP- 298
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 299 ----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLT 354
Query: 276 EKN 278
+
Sbjct: 355 PEG 357
>gi|291616909|ref|YP_003519651.1| YcaI [Pantoea ananatis LMG 20103]
gi|291151939|gb|ADD76523.1| YcaI [Pantoea ananatis LMG 20103]
Length = 764
Score = 49.8 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 17/130 (13%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F+ I + LIAN+LAIP++SFV +P L+A+LL + ++ + L ++
Sbjct: 389 PLQAGLFNGISITALIANLLAIPVVSFVTVPLILVAMLLPVPAISTWFWLAADGSLRFLL 448
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRH-----IGSIMIGITIIIL 212
+ +P + F +++ + I +
Sbjct: 449 ------------TSLALLPPGWWPLQGAAFFMLMVWGGLLVWRTGALFSLPWSCSAIALA 496
Query: 213 FTFPYSFSPD 222
F + P+
Sbjct: 497 MVFSRHYKPE 506
>gi|303239327|ref|ZP_07325855.1| DNA internalization-related competence protein ComEC/Rec2
[Acetivibrio cellulolyticus CD2]
gi|302593113|gb|EFL62833.1| DNA internalization-related competence protein ComEC/Rec2
[Acetivibrio cellulolyticus CD2]
Length = 811
Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 15/164 (9%)
Query: 32 PG-LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGT 90
PG LF+ F + ++ FY K S + ++ + I A IG
Sbjct: 362 PGILFNIGFQLSFAATISLVLFYKYIKEKLSFKFLPSF-------VVDVLAATISAQIGV 414
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL-LMILSLDNIPFGVM 149
+ +F+ + V +++N+L +PI+ F+ I L+A+L + + L + +
Sbjct: 415 L------PITVFYFNKVSVVSILSNLLVVPIVEFITILGSLMALLGQIHVGLSILIGYIN 468
Query: 150 AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
L ++ + + P V + F
Sbjct: 469 NVLLSFVLLVTKFSASMPWSVITLTTPSVILVICYYAAITYFFW 512
>gi|315088784|gb|EFT60760.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL072PA1]
Length = 762
Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/179 (12%), Positives = 58/179 (32%), Gaps = 9/179 (5%)
Query: 46 ISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFH 105
+ ++G++ S+ W+ ++ + + + +
Sbjct: 326 VGSVGFWLSVCATAGILWWAQPWS---VAMEWAPAWLAVGVTVPWAAQVTTQPVITWMAG 382
Query: 106 CIPVYGLIANILAIPIL---SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
+ GL+AN+ A P + S + + GL+A + + L + + W + II IAH
Sbjct: 383 TVSTTGLVANLAAAPFVPPASTLGMVTGLLAFIWLPLGM--PFGRLAGWCVQPIIWIAHF 440
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ A + + + + + T + + + + P
Sbjct: 441 GAKAPSGLIRWPAGGWALGVL-AGLCMGLALITPTVLAKPWLTALAGLAVIAAMVVRPP 498
>gi|238784532|ref|ZP_04628540.1| hypothetical protein yberc0001_26090 [Yersinia bercovieri ATCC
43970]
gi|238714595|gb|EEQ06599.1| hypothetical protein yberc0001_26090 [Yersinia bercovieri ATCC
43970]
Length = 736
Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
FH + ++ + AN+ ++P++S + +P L+A+ +L F MA D+ + + +
Sbjct: 362 FHGVSLFSIPANLWSVPLISLLTVPCVLLALAFTLLPTTAGVFWFMA---DMSLTV---V 415
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
+ N+ G + + + + + S IGI ++ + +S D
Sbjct: 416 LLPLNQLKAGWLHTGATSVALGYGGWLAILIWRFQWWRSYPIGIMVLCVNLVLFSHRRD 474
>gi|281417316|ref|ZP_06248336.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium thermocellum JW20]
gi|281408718|gb|EFB38976.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium thermocellum JW20]
Length = 778
Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 76/200 (38%), Gaps = 32/200 (16%)
Query: 32 PGL-FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGT 90
PG F+ F + ++ FY+ K + + + I + + A IG
Sbjct: 340 PGNLFNIGFQLSFAATISLVLFYTNLKNMLNFGFLPEF-------ITDVLASTLAAQIGV 392
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMA 150
+ +F+ I + +++N++ P++ F+ I L+A+L + I ++
Sbjct: 393 L------PITVFYFNKISLISVLSNLIVAPVVEFITIMGSLMAVLG---QIHIIFSVLIG 443
Query: 151 WG----LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC-------KTNIR- 198
+ L ++ + + P V I F+L +F K N++
Sbjct: 444 YCNNALLSFVLFVTKTTAELPYSVITVSTPSVVLVIIYYIFILFLFWYKPKYKVKLNLKY 503
Query: 199 --HIGSIMIGITIIILFTFP 216
G++ + + I + F +P
Sbjct: 504 CVLAGAVSVAL-IALSFLWP 522
>gi|134296292|ref|YP_001120027.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia vietnamiensis G4]
gi|134139449|gb|ABO55192.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia vietnamiensis G4]
Length = 836
Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/159 (15%), Positives = 56/159 (35%), Gaps = 7/159 (4%)
Query: 47 SAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHC 106
+ G + + + W K ++ + + ++ + + F
Sbjct: 403 AGDGSSDATQQRVAQDRRRVLHAWCKRAAQRLADATRVQYAVTIG----LAPLTAAWFAQ 458
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVA 166
+ V G +N AIP +S VV P ++A + + LD F + L ++ + ++
Sbjct: 459 MSVSGPFSNAFAIPWVSSVVTPL-VLAGVALPAPLDAYAFRLAHAALGPMMTLLRHLADW 517
Query: 167 HNEFCIGRIPETSFVTIV-VEFLLMVFCKTN-IRHIGSI 203
RIP+ + + + + + +R I
Sbjct: 518 PAGVFWLRIPDWPVLALACMGAAWALMPRGWPLRWAAPI 556
>gi|317047560|ref|YP_004115208.1| DNA internalization-like competence protein ComEC/Rec2 [Pantoea sp.
At-9b]
gi|316949177|gb|ADU68652.1| DNA internalization-related competence protein ComEC/Rec2 [Pantoea
sp. At-9b]
Length = 752
Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 68/180 (37%), Gaps = 10/180 (5%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
++ + I F I L+AN+LA+P++SF+ +P L+A+++ + SL + +
Sbjct: 366 HLQLGMMLLMAPLQIFLFQGISWSALVANLLAVPVVSFITVPLILLAMMMPVASLASGLW 425
Query: 147 GVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIG 206
+ + ++ + ++ + + + + V ++ + + +
Sbjct: 426 WLADQSVHRVMQV---LASLPAGWLPWSDALPAMLLLWGGG---VVWRSGMVYRAPLQCC 479
Query: 207 ITIIILFTFPYSFSPD----LLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITP 262
+ L + S D +I L ++ + Y P + S +I P
Sbjct: 480 SVAVTLLLWRVSEPQDDWQIDMIDVGHGLAIVITQGDEAVLYDAGPRWTQGDAGSRVILP 539
>gi|254480654|ref|ZP_05093901.1| DNA internalization-related competence protein ComEC/Rec2 [marine
gamma proteobacterium HTCC2148]
gi|214039237|gb|EEB79897.1| DNA internalization-related competence protein ComEC/Rec2 [marine
gamma proteobacterium HTCC2148]
Length = 644
Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 65/184 (35%), Gaps = 14/184 (7%)
Query: 58 MIYSSESHNTWT--WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIAN 115
+ +S+ + W W+K + + + + + F AN
Sbjct: 236 LSFSAVAALLWMGLWQKSGLKGRYLAPHLYMALVMFPVGALW------FGGASWVSAPAN 289
Query: 116 ILAIPILSFVVIPAGLIAILLMILSLDNIP---FGVMAWGLDIIIHIAHRISVAHNEFCI 172
L IP++ V+P L+ +L LD+ + + +D + +A +++ F
Sbjct: 290 FLMIPLVGLCVVPLSLLGAFFSLLGLDSAASTLWKLAGLPIDWLWPLAEKLAGDQALFVA 349
Query: 173 GRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS-PDLLISEKGNL 231
S ++ L+V R + + + + + + P P L + + G
Sbjct: 350 TPASTLSICLGLLAVGLIVLPFG--RVLRVLCVVMLLPLFLARPQPSPEPQLNVLDVGQG 407
Query: 232 VALV 235
A+V
Sbjct: 408 TAVV 411
>gi|330862897|emb|CBX73034.1| uncharacterized protein ycaI [Yersinia enterocolitica W22703]
Length = 418
Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 55/144 (38%), Gaps = 9/144 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
FH I + + AN+ A+P++S + +P L+A++ +L M W L + A +
Sbjct: 44 FHGISLLSIPANLWAVPLVSLITVPCVLLALVFTLL----PLVAGMFWSLADLSLTAVLL 99
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSF--- 219
++ S +L M+ + + R+ ++ + + ++
Sbjct: 100 PLSPMRIGWFYTGSASVAIGFGGWLAMLIWRFSWWRNYSIGVMVLCVNLVLFTQRRDEYQ 159
Query: 220 -SPDLLISEKGNLVALVDKNTLIS 242
D+L G V + + I
Sbjct: 160 WRVDMLDIGHGLAVVIEREGKAII 183
>gi|314967977|gb|EFT12076.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL037PA1]
Length = 762
Score = 49.8 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/179 (12%), Positives = 58/179 (32%), Gaps = 9/179 (5%)
Query: 46 ISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFH 105
+ ++G++ S+ W+ ++ + + + +
Sbjct: 326 VGSVGFWLSVCATAGILWWAQPWS---VAMEWAPAWLAVGVTVPWAAQVTTQPVITWMAG 382
Query: 106 CIPVYGLIANILAIPIL---SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
+ GL+AN+ A P + S + + GL+A + + L + + W + II IAH
Sbjct: 383 TVSTTGLVANLAAAPFVPPASTLGMVTGLLAFIWLPLGM--PFGRLAGWCVQPIIWIAHF 440
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ A + + + + + T + + + + P
Sbjct: 441 GAKAPSGLIRWPAGGWALGVL-AGLCMGLALITPTVLAKPWLTALAGLAVIAAMVVRPP 498
>gi|229175000|ref|ZP_04302519.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus MM3]
gi|228608461|gb|EEK65764.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus MM3]
Length = 659
Score = 49.4 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
I ++ L+ HF Y + NIL +P LS +V+P +I ++ + + L
Sbjct: 244 ISFISQLVSTPILLYHFGYFSPYSIFLNILYVPFLSLIVLPCSIIVLVCIPIVPFLAKGL 303
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTN 196
V++ GL++ +++ ++ G+ P + +++ +
Sbjct: 304 ANVLSIGLNLSNDFLSYCENLPFIRLVFGQTPILLVALYYASIVSILMVWERR 356
>gi|188534267|ref|YP_001908064.1| Putative competence-related protein [Erwinia tasmaniensis Et1/99]
gi|188029309|emb|CAO97186.1| Putative competence-related protein [Erwinia tasmaniensis Et1/99]
Length = 754
Score = 49.4 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 64/179 (35%), Gaps = 21/179 (11%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHR 162
FH I + L+AN+ A+P++S V +P L+A++ L + + + +G+D + +
Sbjct: 383 FHGISLSALVANLWAVPLVSLVTVPLILVALVCHALPGISALLW----FGVDRSLAL--- 435
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF--- 219
+ + G +P +++ ++ + I L +
Sbjct: 436 VFIPLQYLPHGWLPVDRTLSVASVLCWLILACLRFGWWRTSTASIASTALLLCSWRSLLP 495
Query: 220 ----SPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDL 274
D+L G L +V +N + Y W H P + + L
Sbjct: 496 EPEWRVDMLDVGHG-LAVVVSRNGEATLYDTGNR-----WPGGDAARSHILPWLAWQGL 548
>gi|330975227|gb|EGH75293.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 738
Score = 49.4 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISV 165
I + G AN+LA+P +S +V+P L+ LL+ + + + L + ++
Sbjct: 376 ISLSGPFANLLAVPWVSVIVLPPALLGTLLLPVPVVGEGLLWLAGGALQWLFVFLDAVAA 435
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
A + +P ++ ++ LL++ K +R +G ++ + + D+L
Sbjct: 436 ALPAWLPSAVPIWAWWLSLLGALLLLLPKGVPMRPLGWPLLLLCVFPPLESVPEGQVDVL 495
Query: 225 ISEKGNLVALV 235
+ G +A++
Sbjct: 496 QLDVGQGLAIL 506
Score = 43.2 bits (100), Expect = 0.078, Method: Composition-based stats.
Identities = 31/256 (12%), Positives = 85/256 (33%), Gaps = 14/256 (5%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
P + +L PSG P FD+ + I A G ++ + +
Sbjct: 117 GGQPVNSGERWRMAVKLKRPSGLVNPYAFDYEAWLLAQRIGATGTVVDGERLAPARAAWR 176
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+++ ++ A + + + + G + ++L I +
Sbjct: 177 DALRQRLLAVDAQGREGGLAALVLGDGSG---LSSSDWQVLQDTGTV-HLLVISGQHIGL 232
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
+ + A++ L + L +A ++ + +P +V
Sbjct: 233 LAGVIYALVA---GLARWGLWPRSLPWLPWACALAFSAALGYGLLAGFEVPVRRACVMVA 289
Query: 186 EFLLMVFCKTNIRHIGSI---MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+++ + RH+G + ++ ++++F + P +S + ++ + +
Sbjct: 290 ---MVLLWRLRFRHLGVVWPLLLSFNVVLIFEPLVTLQPGFWLSFAAVGILILIFSGRLG 346
Query: 243 NYSNPPSFIFSQWKSA 258
+ S+ +QW A
Sbjct: 347 AWRWWQSWTRAQWLIA 362
>gi|52141179|ref|YP_085650.1| DNA internalization-related competence protein [Bacillus cereus
E33L]
gi|51974648|gb|AAU16198.1| DNA internalization-related competence protein [Bacillus cereus
E33L]
Length = 773
Score = 49.4 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 56/139 (40%), Gaps = 7/139 (5%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG---LIAILLMILSLDNI 144
I ++ L+ HF Y + NIL +P LS +V+P LI + ++ L
Sbjct: 358 ISLISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCSIIILICMPIIPF-LAKS 416
Query: 145 PFGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGS 202
V++ GL++ +++ S+ G+ P V + +++ + I G
Sbjct: 417 FANVLSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRI-SKGM 475
Query: 203 IMIGITIIILFTFPYSFSP 221
+ I I + + + P
Sbjct: 476 MFIFAGIFLFISTGHYVYP 494
>gi|327330754|gb|EGE72500.1| putative ComE operon protein 3 [Propionibacterium acnes HL097PA1]
Length = 762
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 26/204 (12%), Positives = 64/204 (31%), Gaps = 15/204 (7%)
Query: 46 ISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFH 105
+ ++G++ S+ W+ ++ + + + +
Sbjct: 326 VGSVGFWLSVCATAGILWWAKPWS---VAMEWAPAWLAVGVTVPWAAQVTTQPVITWMAG 382
Query: 106 CIPVYGLIANILAIPIL---SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
+ GL+AN+ A P + S + + GL+A + + L + W + II IAH
Sbjct: 383 TVSTTGLVANLAAAPFVPPASTLGMVTGLLAFIWLPLG--TPFGRLAGWCVQPIIWIAHF 440
Query: 163 ISVAHNEFCIGRIPETSFVTIV-----VEFLLMVFCKTNI--RHIGSIMIGITIIILFTF 215
+ A + + + + + G +I ++
Sbjct: 441 GAKAPSGLIRWPAGGWALGVLAGLCMGLALITPTVLAKPWLTALAGLAVIAAMVVRPPLP 500
Query: 216 PYSFSPDLLISEKGNLVALVDKNT 239
+ + I + G A + +
Sbjct: 501 GWPGQWQVAICDVGQGSAALVRAG 524
>gi|294651088|ref|ZP_06728425.1| competence protein comA [Acinetobacter haemolyticus ATCC 19194]
gi|292823037|gb|EFF81903.1| competence protein comA [Acinetobacter haemolyticus ATCC 19194]
Length = 761
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 18/147 (12%), Positives = 50/147 (34%), Gaps = 10/147 (6%)
Query: 82 NEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-- 139
+ I + ++ F + + + N++AIP+L ++P ++A + ++
Sbjct: 358 SHILIESQWKIFVALLPLVLIFFQQVSWFAPLTNLIAIPLLGACIVPLDILAACVWLIIP 417
Query: 140 SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT--NI 197
+L F + L ++ I + + V++++ L+ +
Sbjct: 418 TLGQWLFQMNDVFLSFLMLILDVLQSISPQLYGISFTPWMMVSLIIGIFLLFLPRGIVPK 477
Query: 198 RHIGSIMIGITIIILFTFPYSFSPDLL 224
+ I + P+ L
Sbjct: 478 FWAAVCFLPI------LWGVKAQPEAL 498
>gi|229031976|ref|ZP_04187961.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH1271]
gi|228729331|gb|EEL80323.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH1271]
Length = 773
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
I ++ L+ HF Y + NIL +P LS +V+P +I ++ + + L
Sbjct: 358 ISLISQLVSTPVLLYHFGYFSPYSIFLNILYVPFLSLIVLPCSIIILVCIPIVPFLAKGL 417
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTN 196
V++ GL++ +++ + F G+ P + +++ +
Sbjct: 418 ANVLSIGLNLSNDFLSYCENFPFIRFVFGQTPLLLVALYCASIVSILMVWERR 470
>gi|157369954|ref|YP_001477943.1| hypothetical protein Spro_1711 [Serratia proteamaculans 568]
gi|157321718|gb|ABV40815.1| DNA internalization-related competence protein ComEC/Rec2 [Serratia
proteamaculans 568]
Length = 737
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 30/195 (15%), Positives = 70/195 (35%), Gaps = 17/195 (8%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIP 145
+I + FH + + + AN+ A+P++S + +P L+A++ I L
Sbjct: 349 HIQLGITLLLLPMQAGLFHGLTLGSIPANLWAVPLVSLITVPLILLAVVAGIFPVLSAGL 408
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
+ + + L + + + + + S + +LL++F + + + +
Sbjct: 409 WRLADFTLAGV-----FTPLHYLQIGWVDLGAASLAVSLAGWLLVIFWRFHWWLRYATAL 463
Query: 206 GITIIILFTF-----PYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALI 260
+ + Y + D+L G L +++KN Y P W +
Sbjct: 464 VTLALCCVLWREREAQYRWRVDMLDVGHG-LAMVIEKNGRAILYDTGPR-----WGTGSA 517
Query: 261 TPFHEAPHVQKEDLQ 275
+ P + L
Sbjct: 518 AGRNILPFLNWRGLP 532
>gi|291085625|ref|ZP_06353537.2| DNA internalization-related competence protein ComEC/Rec2
[Citrobacter youngae ATCC 29220]
gi|291070461|gb|EFE08570.1| DNA internalization-related competence protein ComEC/Rec2
[Citrobacter youngae ATCC 29220]
Length = 708
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 31/210 (14%), Positives = 71/210 (33%), Gaps = 30/210 (14%)
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W + + + ++ + I FH I + +AN+ A+P+++F+
Sbjct: 301 PDWPRARSGRMLLAL-----THLQLGITVLLLPVQISMFHGISLTSFVANLFAVPLVTFI 355
Query: 126 VIPAGLIAILLMILSLDNI---PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P L +L+ + LD + + + L ++ + I
Sbjct: 356 SVPLILAGMLVHLTGLDVLESGLWYLADRSLAVLFW-----GLNALPQGWINIDARWQWL 410
Query: 183 IVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD--------------LLISE 227
+ LL+V + N R I ++ I + +I+ + D ++I+
Sbjct: 411 AFLPGLLLVAYRLNVWRTIPAVCIAVFLILSAPLWRAPRTDAWQVHMLDVGQGLAMVIAR 470
Query: 228 KGNLVALVDKNTLISNYSNPPSFIFSQWKS 257
G A++ L + + W
Sbjct: 471 NGK--AILYDTGLAWPEGDSAQQLIIPWLR 498
>gi|295399241|ref|ZP_06809223.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus thermoglucosidasius C56-YS93]
gi|294978707|gb|EFG54303.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus thermoglucosidasius C56-YS93]
Length = 761
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 9/140 (6%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM---ILSLDN 143
S FL+ +F + ++ L N++ +P+ SFV++P + ++L
Sbjct: 357 FTTFIAQLSVLPFLLYYFFEVSLWSLPLNVIFVPLYSFVILPLSIASLLAYYAHPF-FSI 415
Query: 144 IPFGVMAWGLDIIIH---IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHI 200
++ + +I +A S +GR V V LL R++
Sbjct: 416 PFMWLLQKII--VISSDIVALFSSSRSLSLILGRPSFFFLVCYAVAILLAFVQMERKRYL 473
Query: 201 GSIMIGITIIILFTFPYSFS 220
+ + I PY
Sbjct: 474 SLGWVALVIAFHAFSPYMDR 493
>gi|182680912|ref|YP_001829072.1| DNA internalization-related competence protein ComEC/Rec2 [Xylella
fastidiosa M23]
gi|182631022|gb|ACB91798.1| DNA internalization-related competence protein ComEC/Rec2 [Xylella
fastidiosa M23]
Length = 822
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 45/125 (36%), Gaps = 5/125 (4%)
Query: 76 IKQSFLNEIRANIGTYGSASAS--IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
++ R + G A+ F + F + G +AN++AIP+ +FVV+P L+
Sbjct: 394 MQDGHAASCRGFLSAQGVATLGLLPFTVALFGQVSFVGPLANLIAIPLWTFVVVPLALLG 453
Query: 134 ILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLM 190
L L + + + + ++ + + + ++ +
Sbjct: 454 TALEALVPGWGSPMWRLGGNFFQWSWQLFEYLAQTDFALWWLPESDGVALGLALLGAFWL 513
Query: 191 VFCKT 195
+ +
Sbjct: 514 LLPRG 518
Score = 42.5 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 63/189 (33%), Gaps = 14/189 (7%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFY--SIPKMIYSSESHNTWTW 70
A + + RL P PG FD + +GI A GY ++ + + ++ N W
Sbjct: 173 AGSVWQLHVRLRAPHSLMNPGGFDSERYALAQGIVATGYVRMPTMARELAAATGINAWRE 232
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ + I + L E + + + + GL +++AI ++
Sbjct: 233 RMSARIADAVLLEASVYLRALALGDTRGLSQQDWEVLRATGL-THLIAISGFHVGMVAGA 291
Query: 131 ---LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF 187
L+++L L+ MA IA + + +P + +
Sbjct: 292 CALLVSLLWRDLAWRWPRPIAMAL-------IAVPAAAGYTVLAGASLPTVRTALM-IGI 343
Query: 188 LLMVFCKTN 196
+ +
Sbjct: 344 VALARLTRR 352
>gi|320105758|ref|YP_004181348.1| DNA internalization-like competence protein ComEC/Rec2 [Terriglobus
saanensis SP1PR4]
gi|319924279|gb|ADV81354.1| DNA internalization-related competence protein ComEC/Rec2
[Terriglobus saanensis SP1PR4]
Length = 925
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 33/209 (15%), Positives = 86/209 (41%), Gaps = 12/209 (5%)
Query: 48 AIGYFYSIPKMIYSS--ESHNTWTWKKISSIKQSFLNEI-RANIGTYGSASASIFLIKHF 104
+ F +M+ S+ + + ++ + + + S+ ++ +F
Sbjct: 474 VLAQFRVSLRMVASALLPRNPQIAARALARVVRGSAWLLELVLFSAMAELIMSLPMMIYF 533
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRI 163
H + + L AN++ I ++ F++ ++ +L + + P GV+ G L + + HR+
Sbjct: 534 HRLTPFALPANLICIVLIPFLMGSLAILFVLACVGAPVAAPAGVITAGLLHAVTAVLHRV 593
Query: 164 SVAHNEFCIGRIPET----SFVTIVVEFLLMVFCKTNIRHIGSIMIG-ITIIILFTFPYS 218
S+AH P + +F ++V + ++ IG +++ + +IL+
Sbjct: 594 SLAHGADWRVAEPSSLHVVAFCILMVATVWLLRGSCKAAWIGVVLLPTMAALILWPIRPR 653
Query: 219 FSPDLLISEKGNLVALVDKNTLISNYSNP 247
SP+ L + V + +++ +
Sbjct: 654 LSPERL---EMTAVDVGQGDSIFVASPDG 679
>gi|251789910|ref|YP_003004631.1| hypothetical protein Dd1591_2310 [Dickeya zeae Ech1591]
gi|247538531|gb|ACT07152.1| DNA internalization-related competence protein ComEC/Rec2 [Dickeya
zeae Ech1591]
Length = 793
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 83/248 (33%), Gaps = 32/248 (12%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F ++A+ ++Y + + W W + ++ +
Sbjct: 369 SFWLSALAVAALIFWYQWAPLPLHLQHSWRWGWLRGLHMQIGVTLLLMPLQVLL------ 422
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDII 156
FH + + L AN+ A+P++SFV P L+A+ LM++ + + + + L ++
Sbjct: 423 ------FHGVSLSSLPANLWAVPLVSFVTTPLILLALPLMVVPGIAQVLWWLADRSLALV 476
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+ +P + V +L ++ + + +IL
Sbjct: 477 FLPLQAMPAGWLSLGEHIVPYS-----VAGWLAVIVW--RFAWWRTYPFSLLALILMAAL 529
Query: 217 YSFSP------DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQ 270
P D+L G L ++++ Y P W P+++
Sbjct: 530 RPKPPVPLWRVDMLDVGHG-LAVVIERQGKAWLYDTGPG-----WDGGNSAEREILPYLK 583
Query: 271 KEDLQEKN 278
LQ +
Sbjct: 584 WRGLQLEG 591
>gi|332975693|gb|EGK12577.1| DNA internalization-related competence protein ComEC/Rec2
[Desmospora sp. 8437]
Length = 484
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 19/155 (12%), Positives = 54/155 (34%), Gaps = 13/155 (8%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNE----------IRANIGTYG 92
+ G++A+ + P + + ++ + L+ +
Sbjct: 329 FFGLAALVMLWWNPYQLMEAGFQLSFVVTGALLVATGPLSRRIPTPWPRFNQLTAVTLIA 388
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
++ LI HFH + N + +P+++ +VIP G++++ + + + + W
Sbjct: 389 EVASFPLLIYHFHEFSILSFAVNGIVVPVMTALVIPLGMLSLGMGLFHVSFGFWPA--WA 446
Query: 153 LDIIIHIAHRISVAHNEFCIGRIP-ETSFVTIVVE 186
++ + + + RIP +
Sbjct: 447 ASKLLSGVESLLSFPASWTLFRIPWAPPSGMWMAG 481
>gi|307579380|gb|ADN63349.1| DNA internalization-related competence protein ComEC/Rec2 [Xylella
fastidiosa subsp. fastidiosa GB514]
Length = 836
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 45/125 (36%), Gaps = 5/125 (4%)
Query: 76 IKQSFLNEIRANIGTYGSASAS--IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
++ R + G A+ F + F + G +AN++AIP+ +FVV+P L+
Sbjct: 408 MQDGHAASCRGFLSAQGVATLGLLPFTVALFGQVSFVGPLANLIAIPLWTFVVVPLALLG 467
Query: 134 ILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLM 190
L L + + + + ++ + + + ++ +
Sbjct: 468 TALEALVPGWGSPMWRLGGNFFQWSWQLFEYLAQTDFALWWLPESDGVALGLALLGAFWL 527
Query: 191 VFCKT 195
+ +
Sbjct: 528 LLPRG 532
Score = 44.0 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 63/187 (33%), Gaps = 9/187 (4%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFY--SIPKMIYSSESHNTWTW 70
A + + RL P PG FD + +GI A GY ++ + + ++ N W
Sbjct: 184 AGSVWQLHVRLRAPHSLMNPGGFDSERYALAQGIVATGYVRMPTMARELAAATGINAWRE 243
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ + I + L E + + + + GL +++AI
Sbjct: 244 RMSARIADAVLLEASVYLRALALGDTRGLSQQDWEVLRATGL-THLIAISGFHV----GM 298
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
+ +++SL F +AW IA + + S T+ ++
Sbjct: 299 VAGACALLVSLLWRVFPHLAW--RWPRPIAMALIAVPAAAGYTVLAGASLPTVRTALMIG 356
Query: 191 VFCKTNI 197
+ +
Sbjct: 357 IVALARL 363
>gi|320354422|ref|YP_004195761.1| DNA internalization-like competence protein ComEC/Rec2
[Desulfobulbus propionicus DSM 2032]
gi|320122924|gb|ADW18470.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfobulbus propionicus DSM 2032]
Length = 850
Score = 49.4 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 34 LFDFNFSSYYKGISAIGYFY-SIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
LF +F + + +I Y +P +I +++ + W + + +K + T G
Sbjct: 366 LFTASFQLSFAAVLSINLIYPRLPILISDADTEHAWYKQLQTGLKTVQSLLYVSLAATAG 425
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMA 150
+ L+ HF+ + G + N+L P+L +P GL+AI + L+ L ++ F + +
Sbjct: 426 TV---PILLYHFNRFSLIGPLMNLLIEPLLCLWALPFGLVAIPFIWLAPDLSHVLFYLGS 482
Query: 151 WGLDIIIHIAHRI 163
G+++ + + +
Sbjct: 483 LGIELAVGMTNWA 495
>gi|255532432|ref|YP_003092804.1| ComEC/Rec2-like protein [Pedobacter heparinus DSM 2366]
gi|255345416|gb|ACU04742.1| ComEC/Rec2-related protein [Pedobacter heparinus DSM 2366]
Length = 604
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 60/160 (37%), Gaps = 24/160 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + + I Y PK+ + W + + + A +
Sbjct: 376 GFQLSFLAVFGLI------YLQPKI---------YGWLSVKNPILDKIWHTTA-MSLAAQ 419
Query: 94 ASASIFLIKHFHCIPVYGLIANI-LAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ + +FH P+Y L++N+ + +PI +++ G++ ++ + L + ++ +
Sbjct: 420 LATYPLSVYYFHQFPLYFLVSNLFITLPIA--LIMYLGILILMFRLTGLGALFEWLINFT 477
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
+ IA I I + +++ L+ F
Sbjct: 478 NRGLDKIAGL-----PFSGISAIWISKTELMLLYLTLICF 512
>gi|71275595|ref|ZP_00651880.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Xylella fastidiosa Dixon]
gi|71899492|ref|ZP_00681649.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Xylella fastidiosa Ann-1]
gi|71163486|gb|EAO13203.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Xylella fastidiosa Dixon]
gi|71730712|gb|EAO32786.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Xylella fastidiosa Ann-1]
Length = 825
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 40/112 (35%), Gaps = 3/112 (2%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNI 144
+ + F + F + G +AN++AIP+ +FVV+P L+ L L +
Sbjct: 410 SAQGVATLGLLPFTVALFGQVSFVGPLANLIAIPLWTFVVVPLALLGTALEALVPGWGSP 469
Query: 145 PFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + + ++ + + + ++ ++ +
Sbjct: 470 MWRLGGNCFQWSWQLFEYLAQTDFALWWLPESDGVALGLALLGAFWLLLPRG 521
Score = 42.9 bits (99), Expect = 0.093, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 62/187 (33%), Gaps = 9/187 (4%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSI--PKMIYSSESHNTWTW 70
A + + RL P PG FD + +GI A GY + + + ++ N W
Sbjct: 173 AGSVWQLHVRLRAPHSLLNPGGFDSERYALAQGIVATGYVRAPTMARELAAATGINAWRE 232
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ + I + L E + + + + GL +++AI
Sbjct: 233 RMSARIADAVLLEASVYLRALALGDTRGLSQQDWEVLRATGL-THLIAISGFHV----GM 287
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
+ +++SL F +AW +A + + S T+ ++
Sbjct: 288 VAGACALLVSLLWRVFPHLAW--RWPRPLAMALIAVPAAAGYTVLAGASLPTVRTALMIG 345
Query: 191 VFCKTNI 197
+ +
Sbjct: 346 IVALARL 352
>gi|57233639|ref|YP_180779.1| DNA internalization-related competence protein ComEC/Rec2
[Dehalococcoides ethenogenes 195]
gi|57224087|gb|AAW39144.1| DNA internalization-related competence protein ComEC/Rec2
[Dehalococcoides ethenogenes 195]
Length = 795
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 65/164 (39%), Gaps = 11/164 (6%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F S I M+ + I ++ L + +G +
Sbjct: 337 SFQLSFMSMLGLILVY-------PMLKELNLRLLERFGLSEGILRTALGIVLDGLGVSLA 389
Query: 94 ASASIF--LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
A A I+ L+ +F I + G +A +LA+P + F+++ + L A+L ++ + G +AW
Sbjct: 390 AIAGIWPVLLYYFENISLIGPVATLLAMPAMPFIIVLSFLTALLGLVFPAGAVFMGYLAW 449
Query: 152 -GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
++ + + G P + + + FLL V +
Sbjct: 450 LPCRYMLTVVSLTASLPGVLLAGIRPG-AILMGIYYFLLGVLYR 492
>gi|254491574|ref|ZP_05104753.1| DNA internalization-related competence protein ComEC/Rec2
[Methylophaga thiooxidans DMS010]
gi|224463052|gb|EEF79322.1| DNA internalization-related competence protein ComEC/Rec2
[Methylophaga thiooxydans DMS010]
Length = 749
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDII-IHIA 160
F I V IAN +A+P++SF+V+P L ++++I+S L + LD++ +
Sbjct: 377 FGQISVISPIANFIAVPLVSFLVVPIILFGMVMLIVSEPLARWLLNNADYLLDLMWQWLR 436
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMI 205
+ +++ +P + + +L++ + + + I++
Sbjct: 437 LLANSPISDWHSPFLPIVMIGFVAIAVILILLPRGWPAKWLALILL 482
Score = 42.5 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 73/207 (35%), Gaps = 26/207 (12%)
Query: 6 KKYDPFP-AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFY--SIPKMIYSS 62
+ +P+P A + RL PP G + PG FD+ + + I A GY + +++ +
Sbjct: 112 RASNPYPNAGEHWQFTVRLKPPRGMSNPGSFDYEKWLFTQRIGATGYVRDSTSNQLLQHA 171
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI---FLIKHFHCIPVYGLIANILAI 119
+ ++ ++ L + + I H+ + G +++LAI
Sbjct: 172 SVWDVNRLRQQLQVRLKKLLPDAEQLPLLQGLAIGIRDDLDDSHWQTLRQTG-TSHLLAI 230
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI-AHRISVAHNEFCIGR---- 174
L + A I L+ + +M +++ + AH +
Sbjct: 231 SGLHIGL--AAAIGFFLLRF-----LWSLMP---SLLLRVPAHYVGALGGVILAAFYACL 280
Query: 175 ----IPETSFVTIVVEFLLMVFCKTNI 197
+P +V +L + K +
Sbjct: 281 AGFTVPTQRAFVMVATIMLALVWKRPL 307
>gi|224369292|ref|YP_002603456.1| ComE [Desulfobacterium autotrophicum HRM2]
gi|223692009|gb|ACN15292.1| ComE [Desulfobacterium autotrophicum HRM2]
Length = 818
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 36/226 (15%), Positives = 84/226 (37%), Gaps = 17/226 (7%)
Query: 32 PG-LFDFNFS-SYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIG 89
PG LF +F S++ + +G + K+ +++ ++ + I + + A +G
Sbjct: 352 PGALFSISFQLSFFAVLFILGGMAVVKKLTADTDTGGSFFNRAIKRVGMFMAVSLFAILG 411
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFG 147
++ +F+ I G+ N++ IP F+ +P GL+A+ + L +
Sbjct: 412 ------TQPLVMHYFNQISFAGIFTNLILIPGAGFLALPLGLLALFVYPFFVGLSALLVA 465
Query: 148 V----MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
+ + + +D + ++ + + + + L MVF R G +
Sbjct: 466 LAGFILGFCIDFLGWVSALSMAWSHAVTPDFVEISCYYLFCFG-LFMVFKNMKKR--GVL 522
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
++ +I Y D ++ N+ L + P
Sbjct: 523 LVVAAFVIFSAREYFLILDRFFNKNVNVFVLDVGQGSAALIEAPQG 568
>gi|256752148|ref|ZP_05493014.1| ComEC/Rec2-related protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256748962|gb|EEU62000.1| ComEC/Rec2-related protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 536
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 36/231 (15%), Positives = 80/231 (34%), Gaps = 31/231 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F + AI YFY +K+S + + +
Sbjct: 321 LWDVGFQLSFVATLAILYFYKP-------------IREKLSMLNPKIRELVALTLSAQIG 367
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
F + +FH I + L++NI+ +P+ + V ++ L ++ L P +
Sbjct: 368 TI--PFTMYYFHYISIISLLSNIVIVPLANIAV----VLGFLSAMIGLIFPPLSYFINFI 421
Query: 154 DI-----IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK--TNIRHIGSIMIG 206
+I I++I + +P + + L ++ + I +
Sbjct: 422 NIPVVEVILYITKLFNSFPYASINTIVPPLYVIVLYYGILAVLLSSFDKKTKKISIAIAL 481
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKS 257
+I +F + Y DL + + + ++ + +F F++W
Sbjct: 482 TFVIAIFFYNYLLPKDLEV----TFLDVGQGDSTFVRTPHGKTF-FNRWGR 527
>gi|78044560|ref|YP_359264.1| DNA internalization-related competence protein ComEC/Rec2
[Carboxydothermus hydrogenoformans Z-2901]
gi|77996675|gb|ABB15574.1| DNA internalization-related competence protein ComEC/Rec2
[Carboxydothermus hydrogenoformans Z-2901]
Length = 725
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 29/226 (12%), Positives = 76/226 (33%), Gaps = 33/226 (14%)
Query: 46 ISAIGYFYSIPKMIYSSESHNTWTWK-KISSIKQSFLNEIR----------ANIGTYGSA 94
+SA Y P+ ++S+ ++ I I +++ +
Sbjct: 300 LSAFFYLLIKPQELFSAGFLLSYLATLGIFLIGLPLAEKLKLYLPSYLADTIGVTVGAQI 359
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
+ H+ +IAN+L +P+ +++ +G+ + L L +
Sbjct: 360 LTEPIVFYHYSLFATLSIIANLLVVPLTG-IIMASGIFGLFLSPLR------HLTELLTV 412
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV-FC---KTNIRHIGSIMIGITII 210
+++ ++++ + P + + + +L + F K I + +I I+
Sbjct: 413 FTLNMNSQMALIPGATIAVKKPFFTLIFLFYCWLFLGYFWLVKKEKIDIVKFCVIAFLIL 472
Query: 211 ILFTFPYSFSPDLLISEKGNLV--ALVDKNTLISNYSNPPSFIFSQ 254
+F P E G V A+ + + + + +
Sbjct: 473 GIFLVPK---------EHGKTVFLAVGQGDAAVIHTLRGRTIVVDT 509
>gi|170729597|ref|YP_001775030.1| DNA uptake protein [Xylella fastidiosa M12]
gi|167964390|gb|ACA11400.1| DNA uptake protein [Xylella fastidiosa M12]
Length = 825
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 40/112 (35%), Gaps = 3/112 (2%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNI 144
+ + F + F + G +AN++AIP+ +FVV+P L+ L L +
Sbjct: 410 SAQGVATLGLLPFTVALFGQVSFVGPLANLIAIPLWTFVVVPLALLGTALEALVPGWGSP 469
Query: 145 PFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + + ++ + + + ++ ++ +
Sbjct: 470 MWRLGGNCFQWSWQLFEYLAQTDFALWWLPESDGVALGLALLGAFWLLLPRG 521
Score = 42.9 bits (99), Expect = 0.097, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 62/187 (33%), Gaps = 9/187 (4%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSI--PKMIYSSESHNTWTW 70
A + + RL P PG FD + +GI A GY + + + ++ N W
Sbjct: 173 AGSVWQLHVRLRAPHSLLNPGGFDSERYALAQGIVATGYVRAPTMARELAAATGINAWRE 232
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ + I + L E + + + + GL +++AI
Sbjct: 233 RMSARIADAVLLEASVYLRALALGDTRGLSQQDWEVLRATGL-THLIAISGFHV----GM 287
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
+ +++SL F +AW +A + + S T+ ++
Sbjct: 288 VAGACALLVSLLWRVFPHLAW--RWPRPLAMALIAVPAAAGYTVLAGASLPTVRTALMIG 345
Query: 191 VFCKTNI 197
+ +
Sbjct: 346 IVALARL 352
>gi|303231465|ref|ZP_07318196.1| ComEC/Rec2-like protein [Veillonella atypica ACS-049-V-Sch6]
gi|302513902|gb|EFL55913.1| ComEC/Rec2-like protein [Veillonella atypica ACS-049-V-Sch6]
Length = 730
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 74/196 (37%), Gaps = 31/196 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + Y + + +P W +K + I A +
Sbjct: 402 SFQLSFGATYGLL-----LFGMPLY--------RWITVLPPIVKAPLVLCISAQLLLI-- 446
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSF-VVIPAG-LIAILLMILSLDNIPFGVMAW 151
F + +FH + + L A I+ P+L +V+ G I LL+ + + + V+ W
Sbjct: 447 ----PFQLYYFHYLSLASLFAAIIITPLLDIAIVMLFGCTIISLLIPIGM---VWNVIDW 499
Query: 152 GLDIIIHI-AHRISVAHNEFCIGRIPETSFVTI--VVEFLLMVFCKTNIRH----IGSIM 204
L I +++ AH + + + IG I T V V L + ++ G ++
Sbjct: 500 ILTICLYVNAHLANSSICLWWIGTISATLGVLYYGCVGLLYINLVSLKLKFRTFTKGIVL 559
Query: 205 IGITIIILFTFPYSFS 220
+GI II + +
Sbjct: 560 MGIGIIAIAYSGILYR 575
>gi|317475619|ref|ZP_07934880.1| competence protein [Bacteroides eggerthii 1_2_48FAA]
gi|316908189|gb|EFV29882.1| competence protein [Bacteroides eggerthii 1_2_48FAA]
Length = 684
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 65/185 (35%), Gaps = 15/185 (8%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + ++AI + +Y S +KI + A +
Sbjct: 342 LFDVGFQLSFSAVAAI---LLLQPGLYGLVSVKNTVLRKIWGL---------ATVSVAAQ 389
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWG 152
+ ++ +F + L+ N+ IP++S +V A ++ ++L L + ++
Sbjct: 390 VGTAPLVMFYFSRFSTHFLLTNLWVIPLVSLIVY-AAVVLLVLTPFPGLQQVVADMVEGL 448
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+ + I I + + ++ F L++ C+ R + +L
Sbjct: 449 VRVQNLSLRWIEQLPWA-SIDHVWVDMWDVVLFYFCLLLVCRVWARRTALNVYIALSGLL 507
Query: 213 FTFPY 217
Y
Sbjct: 508 LGAAY 512
>gi|330962640|gb|EGH62900.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. maculicola str. ES4326]
Length = 738
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHIAHRISV 165
I + G AN++A+P +S +V+P L+ LL+ + L + L+ + R++
Sbjct: 376 ISLSGPFANLVAVPWVSVIVLPPALLGTLLLPVPLLGEGLLWLAGGALEWLFMFLDRVAA 435
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
+ +P ++ + LL++ + +R +G ++ + + ++L
Sbjct: 436 VLPAWLPSAVPGWAWGLSFLGGLLLLLPRGVPMRPLGWPLLLLCVFPPLEEVPDGQVEVL 495
Query: 225 ISEKGNLVALV 235
+ G +A++
Sbjct: 496 QLDVGQGLAIL 506
>gi|218128566|ref|ZP_03457370.1| hypothetical protein BACEGG_00136 [Bacteroides eggerthii DSM 20697]
gi|217989290|gb|EEC55604.1| hypothetical protein BACEGG_00136 [Bacteroides eggerthii DSM 20697]
Length = 684
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 65/185 (35%), Gaps = 15/185 (8%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + ++AI + +Y S +KI + A +
Sbjct: 342 LFDVGFQLSFSAVAAI---LLLQPGLYGLVSVKNTVLRKIWGL---------ATVSVAAQ 389
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWG 152
+ ++ +F + L+ N+ IP++S +V A ++ ++L L + ++
Sbjct: 390 VGTAPLVMFYFSRFSTHFLLTNLWVIPLVSLIVY-AAVVLLVLTPFPGLQQVVADMVEGL 448
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+ + I I + + ++ F L++ C+ R + +L
Sbjct: 449 VRVQNLSLRWIEQLPWA-SIDHVWVDMWDVVLFYFCLLLVCRVWARRTALNVYIALSGLL 507
Query: 213 FTFPY 217
Y
Sbjct: 508 LGAAY 512
>gi|70726328|ref|YP_253242.1| hypothetical protein SH1327 [Staphylococcus haemolyticus JCSC1435]
gi|68447052|dbj|BAE04636.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 726
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 53/134 (39%), Gaps = 12/134 (8%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
+ S++I I HF+ I GL++N++ +P SF++ P + D
Sbjct: 331 LTFIAQLSSTIISIYHFNQIQWIGLLSNLIFVPFYSFIIFPLSIFLFFAYHFVSDMTLIN 390
Query: 148 VM--------AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRH 199
++ LD+ + + + + E S +++ + + FC ++
Sbjct: 391 LVFDKIYIVHNKLLDLFLTFKYYQIFISPKSAV----EFSIFVLLIVLIYIFFCYKKLKI 446
Query: 200 IGSIMIGITIIILF 213
+ +I ++ +F
Sbjct: 447 LFLFVIVFIVLCVF 460
>gi|284054879|ref|ZP_06385089.1| ComEC/Rec2-related protein [Arthrospira platensis str. Paraca]
Length = 449
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 32/241 (13%), Positives = 81/241 (33%), Gaps = 53/241 (21%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F + +G ++P ++ S + I+ + + +
Sbjct: 20 GFQFSFLAT------LGLLVTVPPLMRSLQWLPPVIASCIAVPIAAAIWIL--------- 64
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV-MAWG 152
I F+ + + + NILA+P ++ + + L A++ +I + +
Sbjct: 65 ----PLQIYVFNLVSPFSIFVNILAVPFITVITLGGMLTAVVALIWPWAASVLVSGLYYP 120
Query: 153 LDIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFC---------------KTN 196
L +I+I ++ N +G + + + + + +T
Sbjct: 121 LQGLIYIVEFFNNLPGNSIAVGTLSLAQLIGLYSINIWLCLSPIIRPAKASQTDHNKRTR 180
Query: 197 I--RH---IGSIMIGITIIIL------------FTFPYSFSPDLLISEKGNLVALVDKNT 239
I R + I++ I II L + P L++ ++ ++ + +
Sbjct: 181 INARFYQVLAGILMAIAIITLPMAYAQFTQFRVTVLATAEKPILVVEDRDRVLLVNAGDE 240
Query: 240 L 240
Sbjct: 241 R 241
>gi|167855113|ref|ZP_02477885.1| alanyl-tRNA synthetase [Haemophilus parasuis 29755]
gi|167853748|gb|EDS24990.1| alanyl-tRNA synthetase [Haemophilus parasuis 29755]
Length = 758
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLM-ILSLDNIPFGVMAWGLDII 156
F + L+AN++ +P+ SF++IP L ++L + + + WG+D I
Sbjct: 382 FDGTSPFALLANLIIVPLYSFILIPLILFSLLTDNLFQTWWLCHQLAEWGIDWI 435
>gi|296158319|ref|ZP_06841150.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia sp. Ch1-1]
gi|295891263|gb|EFG71050.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia sp. Ch1-1]
Length = 863
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 65/182 (35%), Gaps = 18/182 (9%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYS------SESHNTWTWKKISSIKQSFLNEIR------- 85
F + ++AI + S + + ++S + L +R
Sbjct: 440 FWLSFCAVAAILFAMSGRPRVQDHEQHHDPANEGGEPSSQLSGLCAGLLRRVRGAGERLR 499
Query: 86 --ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
A++ + + + + F IP+ G +AN AIP +S +V PA L ++L LD
Sbjct: 500 SAAHVQFAVTVALAPLTVYWFTQIPLIGPLANAFAIPWVSLLVTPAILAGVVL-PAPLDV 558
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIG 201
+ V L+ + R+S + + + + + + + +R
Sbjct: 559 HAWHVAHALLEWLAAGLQRLSGPAWLLWRLPQPDTWALAAAALGVFWCLAPRGWPLRWAA 618
Query: 202 SI 203
+
Sbjct: 619 PL 620
>gi|153868966|ref|ZP_01998680.1| DNA internalization-related competence protein ComEC/Rec2
[Beggiatoa sp. PS]
gi|152074460|gb|EDN71312.1| DNA internalization-related competence protein ComEC/Rec2
[Beggiatoa sp. PS]
Length = 799
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 61/152 (40%), Gaps = 9/152 (5%)
Query: 106 CIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIA--H 161
I L AN +AIP +SFVV+P L+ ++ + ++ V A+ LD + ++
Sbjct: 392 YISFSSLPANAIAIPWVSFVVVPLTLLGTAIISFLPTEGSLLLRVAAYTLD-TLWVSMIW 450
Query: 162 RISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFS 220
+V P + + +V +++ + + +G + ++ F P
Sbjct: 451 FENVEWGVLQWTIPPFWTILVAMVGIAILLLPRGFPGKWLGIFWLLPIFLVPFPHPNQGE 510
Query: 221 P--DLLISEKGNLVALVDKNTLISNYSNPPSF 250
DLL +G + +N + Y P F
Sbjct: 511 VWLDLLDVGQGLAAVVRTQNYTLV-YDTGPKF 541
>gi|312961641|ref|ZP_07776139.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas fluorescens WH6]
gi|311283900|gb|EFQ62483.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas fluorescens WH6]
Length = 741
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLI--AILLMILSLDNIPFGVMAWGLDIIIHIAHRIS 164
+ V +AN++A+P +S VV+P L+ A+L + L + LD + ++
Sbjct: 376 VSVSAPLANLVAVPWISLVVLPLALLGTALLWVPF-LGAGIVWLAGGALDGLFQGLAWLA 434
Query: 165 VAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITI 209
+ +P + + +L++ K R +G M+ + +
Sbjct: 435 GQVPAWIPAEVPLRYWCVSLAGAILLLLPKGVPFRLLGWPMLLLAV 480
>gi|121534790|ref|ZP_01666610.1| DNA internalization-related competence protein ComEC/Rec2
[Thermosinus carboxydivorans Nor1]
gi|121306585|gb|EAX47507.1| DNA internalization-related competence protein ComEC/Rec2
[Thermosinus carboxydivorans Nor1]
Length = 796
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 18/162 (11%), Positives = 53/162 (32%), Gaps = 22/162 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRAN---IGT 90
L+D +F + + + + Y +K ++ + L E+ A +
Sbjct: 343 LYDISFQLSFAATAGLVFLY-----------------RKTLAVLTTVLPELLAGPFAVTL 385
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN-IPFGVM 149
FL +F+ + + +AN++ +P++ VVI + + + +
Sbjct: 386 AAQLGVLPFLAWYFNTLSLSAFLANLIIVPLVEGVVILGLAACLASLFTGWGAKVLLALC 445
Query: 150 AWGLDIIIHIAHRISV-AHNEFCIGRIPETSFVTIVVEFLLM 190
+ ++ +A ++ + + +
Sbjct: 446 GLAIGAVVQLAAFLAALPGGVVYLPPFTIWAGLIYYFLIAWA 487
>gi|219870708|ref|YP_002475083.1| recombination protein 2 [Haemophilus parasuis SH0165]
gi|219690912|gb|ACL32135.1| recombination protein 2 / DNA internalization-related competence
protein ComEC/Rec2 / predicted membrane metal-binding
protein [Haemophilus parasuis SH0165]
Length = 759
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLM-ILSLDNIPFGVMAWGLDII 156
F + L+AN++ +P+ SF++IP L ++L + + + WG+D I
Sbjct: 383 FDGTSPFALLANLIIVPLYSFILIPLILFSLLTDNLFQTWWLCHQLAEWGIDWI 436
>gi|318606260|emb|CBY27758.1| putative hydrolase of the metallo-beta-lactamase superfamily,
clustered with KDO2-Lipid A biosynthesis genes [Yersinia
enterocolitica subsp. palearctica Y11]
Length = 761
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 55/144 (38%), Gaps = 9/144 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
FH I + + AN+ A+P++S + +P L+A++ +L M W L + A +
Sbjct: 387 FHGISLLSIPANLWAVPLVSLITVPCVLLALVFTLL----PLVAGMFWSLADLSLTAVLL 442
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSF--- 219
++ S +L M+ + + R+ ++ + + ++
Sbjct: 443 PLSPMRIGWLYTGSASVAIGFGGWLAMLIWRFSWWRNYSIGVMVLCVNLVLFTQRRDEYQ 502
Query: 220 -SPDLLISEKGNLVALVDKNTLIS 242
D+L G V + + I
Sbjct: 503 WRVDMLDIGHGLAVVIEREGKAII 526
>gi|227356794|ref|ZP_03841179.1| possible competence protein EC [Proteus mirabilis ATCC 29906]
gi|227163084|gb|EEI48019.1| possible competence protein EC [Proteus mirabilis ATCC 29906]
Length = 789
Score = 49.0 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 7/130 (5%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDII 156
F F ++ L+ N+ A+PI+SF+ +P + + L L I + + ++
Sbjct: 411 PFQYYLFGGGNLFSLLVNLWAVPIISFITVPLIMCGLFTAFLPVLQPIIWSWVDQSINWA 470
Query: 157 IHIA-HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
A + ++ + + L+V + RH I+I I +
Sbjct: 471 FFCAPYFLAYWQPCGAVP-----WLFALSGIMTLLVIKMSWWRHHVIILITIATFLYCEL 525
Query: 216 PYSFSPDLLI 225
+S D I
Sbjct: 526 SFSKRYDWRI 535
>gi|28198275|ref|NP_778589.1| DNA uptake protein [Xylella fastidiosa Temecula1]
gi|28056345|gb|AAO28238.1| DNA uptake protein [Xylella fastidiosa Temecula1]
Length = 789
Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 45/125 (36%), Gaps = 5/125 (4%)
Query: 76 IKQSFLNEIRANIGTYGSASAS--IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
++ R + G A+ F + F + G +AN++AIP+ +FVV+P L+
Sbjct: 361 MQDGHAASCRGFLSAQGVATLGLLPFTVALFGQVSFVGPLANLIAIPLWTFVVVPLALLG 420
Query: 134 ILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLM 190
L L + + + + ++ + + + ++ +
Sbjct: 421 TALEALVPGWGSPMWRLGGNFFQWSWQLFEYLAQTDFALWWLPESDGVALGLALLGAFWL 480
Query: 191 VFCKT 195
+ +
Sbjct: 481 LLPRG 485
Score = 43.6 bits (101), Expect = 0.054, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 63/187 (33%), Gaps = 9/187 (4%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFY--SIPKMIYSSESHNTWTW 70
A + + RL P PG FD + +GI A GY ++ + + ++ N W
Sbjct: 137 AGSVWQLHVRLRAPHSLMNPGGFDSERYALAQGIVATGYVRMPTMARELAAATGINAWRE 196
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ + I + L E + + + + GL +++AI
Sbjct: 197 RMSARIADAVLLEASVYLRALALGDTRGLSQQDWEVLRATGL-THLIAISGFHV----GM 251
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
+ +++SL F +AW IA + + S T+ ++
Sbjct: 252 VAGACALLVSLLWRVFPHLAW--RWPRPIAMALIAVPAAAGYTVLAGASLPTVRTALMIG 309
Query: 191 VFCKTNI 197
+ +
Sbjct: 310 IVALARL 316
>gi|74317777|ref|YP_315517.1| DNA internalization-related competence protein ComEC/Rec2
[Thiobacillus denitrificans ATCC 25259]
gi|74057272|gb|AAZ97712.1| DNA internalization-related competence protein ComEC/Rec2
[Thiobacillus denitrificans ATCC 25259]
Length = 778
Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 27/216 (12%), Positives = 70/216 (32%), Gaps = 11/216 (5%)
Query: 51 YFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY 110
+ S + W + + ++ + + + L+ F + +
Sbjct: 352 WAVVSAGFWLSFGAMAAILWVSFGRVARPAKLRGWISVQAAVTLALAPALLLLFQQVSLV 411
Query: 111 GLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF 170
AN +AIP++S++V P L+ +++ L + A ++ + S
Sbjct: 412 SPFANAVAIPVVSWLVTPLALLGVIVPPL------WDAAAAVMEWLGSGLAWASNLSWAV 465
Query: 171 CIGRIPETSFVTIVVEF-LLMVFCKT-NIRHIGSIMIGITII--ILFTFPYSFSPDLLIS 226
+ P+ + + ++ + R +G + + P F D++
Sbjct: 466 MVRPAPQPWTAALALAGTFWLLLPRGFPARALGGLFFLPLAFSPVETLAPGGFRADVIDV 525
Query: 227 EKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITP 262
+G + + Y +F S ++ P
Sbjct: 526 GQGTAILIRTA-RHALLYDTGAAFADSDAGERIVVP 560
>gi|149927850|ref|ZP_01916101.1| DNA internalization-related competence protein ComEC/Rec2
[Limnobacter sp. MED105]
gi|149823472|gb|EDM82703.1| DNA internalization-related competence protein ComEC/Rec2
[Limnobacter sp. MED105]
Length = 811
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 60/161 (37%), Gaps = 12/161 (7%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
F ++ +I+ ++ H + K I + + IG + F+ +
Sbjct: 376 FGAVAVLIFVTQGHYLFIKPKQELIANAVKAQYTVTIGLILPCAML------FNQQSLIS 429
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII-HIAHRISVAHNEF 170
+AN L+IP +SFV P L+ L+ + + A L + + + +
Sbjct: 430 PLANALSIPWMSFVSTPLALLGGLVQ----QPVLLWLAANSLALQRKWLVYFNELNWATL 485
Query: 171 CIGRIPETSFVTIVVEFLLMVFCKTNI-RHIGSIMIGITII 210
+ P + + L+++ I R G +I + +I
Sbjct: 486 PVHNQPGWINALVALGCLVLILPAGLIPRWTGIALIALLLI 526
>gi|325954423|ref|YP_004238083.1| ComEC/Rec2-related protein [Weeksella virosa DSM 16922]
gi|323437041|gb|ADX67505.1| ComEC/Rec2-related protein [Weeksella virosa DSM 16922]
Length = 667
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 75/192 (39%), Gaps = 29/192 (15%)
Query: 30 AFP-GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI 88
P LFD F + + +F +++ ++ W + S I QSF +
Sbjct: 326 VRPNDLFDIGFRLSFSAV----FF-----IVWLNDITMKWVRRG-SFISQSFKGLL--TT 373
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
T F +F+ L NI+ IP +++++ GL++ILL + +D +P +
Sbjct: 374 STAAQLGTMPFASLYFNQFSWLFLFGNIVLIP-AAYLMMILGLLSILL--VGIDFVPTFI 430
Query: 149 MA---WGLDIIIHIAHRISVAHNEF--CIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
+ + ++ I ++ + P TSF+ IV L+ R +
Sbjct: 431 VEVNNFFINTINTYIGWLATWDKLVWRNLYISPFTSFLLIVA---LVCL-----RFVFVQ 482
Query: 204 MIGITIIILFTF 215
I +I+L
Sbjct: 483 QSKIALIVLLIA 494
>gi|332162204|ref|YP_004298781.1| hypothetical protein YE105_C2582 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325666434|gb|ADZ43078.1| hypothetical protein YE105_C2582 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 761
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 55/144 (38%), Gaps = 9/144 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
FH I + + AN+ A+P++S + +P L+A++ +L M W L + A +
Sbjct: 387 FHGISLLSIPANLWAVPLVSLITVPCVLLALVFTLL----PLVAGMFWSLADLSLTAVLL 442
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSF--- 219
++ S +L M+ + + R+ ++ + + ++
Sbjct: 443 PLSPMRIGWFYTGSASVAIGFGGWLAMLIWRFSWWRNYSIGVMVLCVNLVLFTQRRDEYQ 502
Query: 220 -SPDLLISEKGNLVALVDKNTLIS 242
D+L G V + + I
Sbjct: 503 WRVDMLDIGHGLAVVIEREGKAII 526
>gi|299067171|emb|CBJ38367.1| conserved membrane protein of unknown function, ComEC/Rec2 domain
[Ralstonia solanacearum CMR15]
Length = 845
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 21/185 (11%), Positives = 53/185 (28%), Gaps = 10/185 (5%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+F + A + + + W+ + + + +
Sbjct: 384 LSFGAVAVIFLAARIVAADARDDGRRPAWPVRAWRGLRGAAR---------VQLAVTFGL 434
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ F + V +AN LAIP++SFV P L+ L +
Sbjct: 435 LPLTLLLFQQVSVVSAVANALAIPVVSFVTTPLALMGAAL-PEPWSQPVLAWAEASFAWL 493
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+ +++ + + + V + ++ R G +++
Sbjct: 494 MPWLDALALPDWSVWVAPVAPAWAWGLAVVGVPLLLVPGGHRAWAWRAKGAVLLLPMLLA 553
Query: 217 YSFSP 221
+ +P
Sbjct: 554 RAPAP 558
>gi|330945619|gb|EGH47113.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. pisi str. 1704B]
Length = 294
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISV 165
I + G AN+LA+P +S +V+P L+ LL+ + + + L + ++
Sbjct: 11 ISLSGPFANLLAVPWVSVIVLPPALLGTLLLPVPVVGEGLLWLAGGALQWLFVFLDAVAA 70
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
A + +P ++ ++ LL++ K +R +G ++ + + ++L
Sbjct: 71 ALPAWLPSAVPIWAWWLSLLGALLLLLPKGVPMRPLGWPLLLLCVFPPLESVPEGQVEVL 130
Query: 225 ISEKGNLVALV 235
+ G +A++
Sbjct: 131 QLDVGQGLAIL 141
>gi|22299245|ref|NP_682492.1| competence protein [Thermosynechococcus elongatus BP-1]
gi|22295427|dbj|BAC09254.1| competence protein [Thermosynechococcus elongatus BP-1]
Length = 761
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 29/215 (13%), Positives = 73/215 (33%), Gaps = 25/215 (11%)
Query: 42 YYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI 101
+ + I F + +I S++ + + ++ + A + + A
Sbjct: 357 WIEDIGFQLSFLATLGLIVSAQPISDRLHWLPTPLRSPLAVALAATLWVLPLSLAI---- 412
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPA---GLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F IPVYGL AN++A P L + + + +L L + ++++ +++
Sbjct: 413 --FGTIPVYGLPANVIANPFLILLTVGGFISATVGFILPPLG--SALAWLLSYPTALLLW 468
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF----- 213
+ I V ++ +L+V+ R ++ + + ++
Sbjct: 469 LIETIGRWPGAVIALGSLGWLQVIVLYGLMLLVWLSPPWRRRWFLLFTLGVTLVLVPFIF 528
Query: 214 ---------TFPYSFSPDLLISEKGNLVALVDKNT 239
+ P L+I + V + +
Sbjct: 529 RQTTLFQATVLANTRVPTLVIQQPAGTVVINGGDA 563
>gi|50842381|ref|YP_055608.1| putative ComE operon protein 3 [Propionibacterium acnes KPA171202]
gi|50839983|gb|AAT82650.1| putative ComE operon protein 3 [Propionibacterium acnes KPA171202]
Length = 784
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 60/203 (29%), Gaps = 19/203 (9%)
Query: 49 IGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP 108
+G++ S W+ ++ + + + + +
Sbjct: 351 VGFWLSACATAGILWWAQPWS---VAMEWAPAWLAVGVTVPWAAQVTTQPVITWMAGTVS 407
Query: 109 VYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-----GVMAWGLDIIIHIAHRI 163
GL+AN+ A P V PA + ++ +L+ P + W + II IAH
Sbjct: 408 TTGLVANLAAAP----FVPPASALGMVTGLLAFIWPPLGTPFGRLAGWCVQPIIWIAHFG 463
Query: 164 SVAHNEFCIGRIPETSFVTIV-----VEFLLMVFCKTNI--RHIGSIMIGITIIILFTFP 216
+ A + + + + + G +I ++
Sbjct: 464 AKAPSGLIRWPAGGWALGVLAGLCVGLALITPTVLARPWLTALAGLAVIAAMVVRPPLPG 523
Query: 217 YSFSPDLLISEKGNLVALVDKNT 239
+ + I + G A + +
Sbjct: 524 WPGQWQVAICDVGQGSAALVRAG 546
>gi|291567021|dbj|BAI89293.1| competence protein [Arthrospira platensis NIES-39]
Length = 817
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 58/161 (36%), Gaps = 21/161 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F + +G ++P ++ S + I+ + + +
Sbjct: 388 GFQFSFLAT------LGLLVTVPPLMRSLQWLPPVIASCIAVPIAAAIWIL--------- 432
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-GVMAWG 152
I F+ + + + NILA+P ++ + + L A++ +I + +
Sbjct: 433 ----PLQIYVFNLVSPFSIFVNILAVPFITVITLGGMLTAVVALIWPWAASVLVSALYYP 488
Query: 153 LDIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
L +I+I ++ N +G + + + + +
Sbjct: 489 LQGLIYIVEFFNNLPGNSIAVGTLSLAQLIGLYSINIWLCL 529
>gi|94499585|ref|ZP_01306122.1| DNA internalization-related competence protein ComEC/Rec2
[Oceanobacter sp. RED65]
gi|94428339|gb|EAT13312.1| DNA internalization-related competence protein ComEC/Rec2
[Oceanobacter sp. RED65]
Length = 722
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 50/151 (33%), Gaps = 7/151 (4%)
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL 131
+ + +I L+ + V G++ N++ IPI SFV++P
Sbjct: 339 GFAGSGTVSFWRALIRSQKLAFLAGAIVLVFFNQYVSVSGVLINLILIPIFSFVILPCSF 398
Query: 132 IAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
+A+L L V + +++ H + + + + + LL
Sbjct: 399 LALLAASLGNIQGIIYV-EEAMHWVLYCLHVNREWVDWWPNIHADNKWLMIVALSLLLF- 456
Query: 192 FCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
R ++++ + SPD
Sbjct: 457 -----PRVFHLRCFAAAVMVVALSMPASSPD 482
>gi|66044877|ref|YP_234718.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Pseudomonas syringae pv. syringae
B728a]
gi|63255584|gb|AAY36680.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Pseudomonas syringae pv. syringae
B728a]
Length = 738
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISV 165
I + G AN+LA+P +S +V+P L+ LL+ + + + L + ++
Sbjct: 376 ISLSGPFANLLAVPWVSVIVLPPALLGTLLLPVPVVGEGLLWLAGGALQGLFVFLGAVAA 435
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
A + +P ++ ++ LL++ K +R +G ++ + + D+L
Sbjct: 436 ALPAWLPSAVPVWAWWLSLLGALLLLLPKGVPLRPLGWPLLLLCVFPPLESVPEGQVDVL 495
Query: 225 ISEKGNLVALV 235
+ G +A++
Sbjct: 496 QLDVGQGLAIL 506
Score = 40.6 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 31/256 (12%), Positives = 83/256 (32%), Gaps = 14/256 (5%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
P + +L P+G P FD+ + I A G + + +
Sbjct: 117 GGQPVNSGERWRMAIKLKRPAGLVNPDAFDYEAWLLAQRIGATGTVVDGQLLAPARAAWR 176
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+++ ++ A + + + + G + ++L I +
Sbjct: 177 DAIRQRLLAVDAQGREGGLAALVLGDGSG---LSSTDWQVLQDTGTV-HLLVISGQHIGL 232
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
+ + A++ L L +A ++ + +P +V
Sbjct: 233 LAGVIYALVA---GLARWGLWPRFLPWLPSACALAFSAALGYGLLAGFEVPVRRACVMVA 289
Query: 186 EFLLMVFCKTNIRHIGSI---MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+++ + RH+G + ++ +++F + P +S + ++ + +
Sbjct: 290 ---MVLLWRLRFRHLGVVWPLLLSFNAVLIFEPLVTLQPGFWLSFAAVGILILIFSGRLG 346
Query: 243 NYSNPPSFIFSQWKSA 258
+S S+ +QW A
Sbjct: 347 AWSWWQSWTRAQWLIA 362
>gi|123441854|ref|YP_001005837.1| hypothetical protein YE1542 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088815|emb|CAL11621.1| putative membrane protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 761
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 55/144 (38%), Gaps = 9/144 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
FH I ++ + AN+ A+P++S + +P L+A++ +L M W L + A +
Sbjct: 387 FHGISLFSIPANLWAVPLVSLITVPCVLLALVFTLL----PSVAGMFWSLADLSLTAVLL 442
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSF--- 219
++ S +L M+ + R+ ++ + + ++
Sbjct: 443 PLSPMRIGWFYTGSASVAIGFGGWLAMLIWRFAWWRNYSIGVMVLCVNLVLFTQRRDEYQ 502
Query: 220 -SPDLLISEKGNLVALVDKNTLIS 242
D+L G V + + I
Sbjct: 503 WRVDMLDIGHGLAVVIEREGKAII 526
>gi|239827787|ref|YP_002950411.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. WCH70]
gi|239808080|gb|ACS25145.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. WCH70]
Length = 759
Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 50/146 (34%), Gaps = 4/146 (2%)
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
S + SA FL+ +F + ++ + NI+ +P+ SF ++P A+
Sbjct: 347 DSVFWRLF-FTAFIAQLSALPFLLYYFFEVSLWSIPLNIIFVPLYSFAIMPLSFAAVGTH 405
Query: 138 ILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK- 194
+ L ++ + I + S H+ + P F+ + F +
Sbjct: 406 YIHSLLSFPFIWLLQKIIVISSDVVAFFSSNHSLSLVLGRPSFFFLICYAAAIFAAFVQM 465
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFS 220
R+ + I + PY
Sbjct: 466 EKRRYFSIGWVAFVITLHAWSPYMDR 491
>gi|150002657|ref|YP_001297401.1| competence protein [Bacteroides vulgatus ATCC 8482]
gi|149931081|gb|ABR37779.1| competence protein [Bacteroides vulgatus ATCC 8482]
Length = 650
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 49/122 (40%), Gaps = 5/122 (4%)
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL 131
++ ++ I A + + +I F PVY L AN++ P++ V+I +
Sbjct: 382 RVRHPVPRYIWGIVA-VSLAAQLGTAPVVIYKFAYFPVYFLPANLIVAPLV-LVIIYGTV 439
Query: 132 IAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
+ +L ++ + V+ GL+ ++ + + + + + + V L ++
Sbjct: 440 ASFVLSPFTV--LHIWVV-KGLNGVLRLLNDSMQWVGDLPVSHSGDIHLSLLQVGILYVL 496
Query: 192 FC 193
Sbjct: 497 LF 498
>gi|196039278|ref|ZP_03106584.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus NVH0597-99]
gi|196029905|gb|EDX68506.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus NVH0597-99]
Length = 579
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 56/139 (40%), Gaps = 7/139 (5%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG---LIAILLMILSLDNI 144
I ++ L+ HF Y + NIL +P LS +V+P LI + ++ L
Sbjct: 164 ISLISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCSIIILICMPIIPF-LAKS 222
Query: 145 PFGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGS 202
V++ GL++ +++ S+ G+ P V + +++ + I G
Sbjct: 223 FANVLSIGLNLSNDFLSYCESLPFIRLNFGQTPILLVALYCVSIISILMVWERRI-SKGM 281
Query: 203 IMIGITIIILFTFPYSFSP 221
+ I I + + + P
Sbjct: 282 MFIFAGIFLFISTCHYVYP 300
>gi|226952099|ref|ZP_03822563.1| competence factor involved in DNA uptake [Acinetobacter sp. ATCC
27244]
gi|226837155|gb|EEH69538.1| competence factor involved in DNA uptake [Acinetobacter sp. ATCC
27244]
Length = 812
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 16/140 (11%), Positives = 51/140 (36%), Gaps = 3/140 (2%)
Query: 82 NEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-- 139
+ I + ++ F + + + N++AIP+L ++P ++A + ++
Sbjct: 409 SHILIESQWKIFVALLPLVLIFFQQVSWFAPLTNLIAIPLLGACIVPLDILAACVWLITP 468
Query: 140 SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI-R 198
+L F + L ++ I + + V++++ L+ + + +
Sbjct: 469 TLGQWLFQMNDVFLSFLMLILDVLQSISPQLYGISFTPWMMVSLIIGIFLLFLPRGIVPK 528
Query: 199 HIGSIMIGITIIILFTFPYS 218
++ + P +
Sbjct: 529 FWAAVCFLPIFWGVKAQPEA 548
>gi|283795069|ref|ZP_06344222.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium sp. M62/1]
gi|291077410|gb|EFE14774.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium sp. M62/1]
Length = 831
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 60/183 (32%), Gaps = 39/183 (21%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + + AIG+ ++ S WT +
Sbjct: 344 AFQLSFGAVF----AIGWAGK--ELTDSFRCRRGWTRAL--------------AVSAAIQ 383
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAW 151
++ HF PVYG++ N + IP++++VV AGL + L +++ F +
Sbjct: 384 LVTGPLVLWHFFEYPVYGILLNFIVIPLMTYVV-GAGLAGLFLGLMAELFSACSFSAVFE 442
Query: 152 GLDIII----------------HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
GL ++ + + I P + L ++ +T
Sbjct: 443 GLFGLLAAGSMGTCHYILAFYEWLCRAVGKLPIYSLILGRPALWKLAAYYLMLSVLLWRT 502
Query: 196 NIR 198
R
Sbjct: 503 AKR 505
>gi|206560545|ref|YP_002231310.1| metallo-beta-lactamase superfamily membrane protein [Burkholderia
cenocepacia J2315]
gi|198036587|emb|CAR52484.1| metallo-beta-lactamase superfamily membrane protein [Burkholderia
cenocepacia J2315]
Length = 835
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/216 (12%), Positives = 72/216 (33%), Gaps = 6/216 (2%)
Query: 30 AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRAN-- 87
F +F + + A+ + ++ + + W+ + A+
Sbjct: 377 VLSAGFWLSFGAVAVILLAVAGWRAVREADEAGMEGGAADWRSRLRAWTTRCGRRLADAT 436
Query: 88 -IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
+ + + F + + G N AIP +S VV P ++A + + LD F
Sbjct: 437 RVQYAVTIGLAPLTAAWFAQVSLSGPFGNAFAIPWVSSVVTPV-VLAGIALPPPLDAAAF 495
Query: 147 GVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV-VEFLLMVFCKTN-IRHIGSIM 204
+ L+ ++ + ++ R+P+ + + V ++ + +R +
Sbjct: 496 RLAHAALEPMMTLLGHLADWPAGVFWLRMPDWPVLALACVGVAWVLMPRGWPLRWAAPLT 555
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ P + + + G A++ +
Sbjct: 556 WLPLVAPAPDAPPPGGFRMTVLDVGQGAAVLVETAR 591
>gi|15891941|ref|NP_359655.1| hypothetical protein RC0018 [Rickettsia conorii str. Malish 7]
gi|15619051|gb|AAL02556.1| unknown [Rickettsia conorii str. Malish 7]
Length = 82
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 20 IARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH-NTWTWKKISSIKQ 78
+A+L P P +DF F +Y I A GY S P++I +E++ +++ ++ S I
Sbjct: 2 LAKLYKPQNSILPEGYDFGFYAYLSDIGANGYAMSEPQIIERNETNFDSFIYRVRSYIYN 61
Query: 79 SFLNEIRANIGT 90
+ + +I+ +
Sbjct: 62 NLIEKIKGLLQL 73
>gi|238789315|ref|ZP_04633102.1| hypothetical protein yfred0001_41240 [Yersinia frederiksenii ATCC
33641]
gi|238722647|gb|EEQ14300.1| hypothetical protein yfred0001_41240 [Yersinia frederiksenii ATCC
33641]
Length = 726
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 48/120 (40%), Gaps = 8/120 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHR 162
F I + + AN+ A+PI+SF+ +P L+A++ + ++ + + + L +
Sbjct: 352 FQGISLLSIPANLWAVPIVSFMTVPCVLLALVFTLFPTIAAVFWLLADMSLTAVF----- 406
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
+ + +G + + + +V + + IGI I+ + D
Sbjct: 407 --LPFDYLNVGWLYTGTTSIALGYGGWLVMLIWRFQWWRNYPIGIMILCANLILLTQRRD 464
>gi|53803220|ref|YP_115031.1| DNA internalization-related competence protein ComEC/Rec2
[Methylococcus capsulatus str. Bath]
gi|53756981|gb|AAU91272.1| DNA internalization-related competence protein ComEC/Rec2
[Methylococcus capsulatus str. Bath]
Length = 801
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/159 (13%), Positives = 54/159 (33%), Gaps = 6/159 (3%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+ P S + + + + L A S + L+ F I +
Sbjct: 354 AVTSPGFWLSFLAVAFILYLLTGRLHRPGLVGGLAWTNWATSLGLAPVLLFFFGQISLVS 413
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH---IAHRISVAHN 168
+AN+ A+P+L + P L + L++++ + +M + ++ +S
Sbjct: 414 PLANLFAVPVLGLAITPLALFSALVLLV-WPAVGEVLMGFTETLVAWSWKALEWLSALSW 472
Query: 169 EFCIGRIPETSFVTI-VVEFLLMVFCKT-NIRHIGSIMI 205
P + + +++ + R +G ++
Sbjct: 473 AQWQHAAPPFPMALLAALGVAVLMVPRGIPGRWLGLFLL 511
>gi|16329718|ref|NP_440446.1| ComE [Synechocystis sp. PCC 6803]
gi|1652202|dbj|BAA17126.1| ComE [Synechocystis sp. PCC 6803]
Length = 709
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 54/147 (36%), Gaps = 4/147 (2%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDN 143
+ S + L++ F L NIL P+L+ + + + A+ +I L +
Sbjct: 393 VIAVPLAASVWTTPILLQQFGYFIPAALPLNILITPLLALLSLGGMVSALCALIFPPLGS 452
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
++A+ ++ IA + +G + V + F L+ R G +
Sbjct: 453 ATGWLLAFPARWLMAIADQFQQL-PTVAVGEVGLGQVVIMYGAFCLIWAFPWWRRRWGLV 511
Query: 204 --MIGITIIILFTFPYSFSPDLLISEK 228
+ TII+ F +L I +
Sbjct: 512 STFLLGTIILPLIFSLQTRVELTIFDS 538
>gi|204930093|ref|ZP_03221114.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|204321087|gb|EDZ06288.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
Length = 704
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 59/161 (36%), Gaps = 18/161 (11%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 350 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 409
Query: 161 HRISVAHNEFCIGRIPET-SFVTIVVEFLL-MVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+ ++ I + +F + + +T + + ++L ++P
Sbjct: 410 N--ALPQGWVNIDNRWQWLTFWPWLTLIAWRLNVWRTW------PAVCLCGLLLMSWPLW 461
Query: 219 FSPDLLISEKGNLVALVD-KNTLISNYSNPPSFIFSQWKSA 258
I+ G V ++D L I A
Sbjct: 462 RP----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRA 498
>gi|296133956|ref|YP_003641203.1| DNA internalization-related competence protein ComEC/Rec2
[Thermincola sp. JR]
gi|296032534|gb|ADG83302.1| DNA internalization-related competence protein ComEC/Rec2
[Thermincola potens JR]
Length = 810
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 66/161 (40%), Gaps = 11/161 (6%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGT--YGSASASIFLIKHFHCIPV 109
F + ++ +++ + I ++ +R ++ S LI +F+ +P+
Sbjct: 351 FTTGAQLSFAATWGILYLTSPIKNLIGFMPAALRGSLAVIFAAQISTMPLLIYYFNYLPL 410
Query: 110 YGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP-FGVMAWGLDIIIHIAHRISVAHN 168
+ ++AN+L +P+++ ++ L+A + + L +P ++ G ++ + I
Sbjct: 411 FSVLANLLVVPLITLII----LLACTSLTVGLLFLPGAVLLNTGTSCLLQVVRWIIWIVG 466
Query: 169 EFCIG----RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
+ + P + I L+++ R + ++
Sbjct: 467 RLPVAVYNIQSPRLWELVIWYGILVLLGALYWERLLYLRVL 507
>gi|218905462|ref|YP_002453296.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH820]
gi|218534783|gb|ACK87181.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH820]
Length = 654
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIP 145
I ++ L+ HF Y + NIL +P LS +V+P +I ++ + + L
Sbjct: 239 ISLISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSF 298
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGSI 203
V++ GL++ +++ S+ G+ P V + +++ + I G +
Sbjct: 299 ANVLSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRI-SKGMV 357
Query: 204 MIGITIIILFTFPYSFSP 221
I I + + + P
Sbjct: 358 FIFAGIFLFISTGHYVYP 375
>gi|330973874|gb|EGH73940.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. aceris str. M302273PT]
Length = 600
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISV 165
I + G AN+LA+P +S +V+P L+ LL+ + + + L + ++
Sbjct: 238 ISLSGPFANLLAVPWVSVIVLPPALLGTLLLPVPVVGEGLLWLAGGALQGLFVFLGAVAA 297
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
A + +P ++ ++ LL++ K +R +G ++ + + D+L
Sbjct: 298 ALPAWLPSAVPVWAWWLSLLGALLLLLPKGVPLRPLGWPLLLLCVFPPLESVPEGQVDVL 357
Query: 225 ISEKGNLVALV 235
+ G +A++
Sbjct: 358 QLDVGQGLAIL 368
>gi|301055817|ref|YP_003794028.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis CI]
gi|300377986|gb|ADK06890.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus biovar anthracis str. CI]
Length = 773
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIP 145
I ++ L+ HF Y + NIL +P LS +V+P +I ++ + + L
Sbjct: 358 ISLISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSF 417
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGSI 203
V++ GL++ +++ S+ G+ P V + +++ + I G +
Sbjct: 418 ANVLSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRI-SKGMV 476
Query: 204 MIGITIIILFTFPYSFSP 221
I I + + + P
Sbjct: 477 FIFAGIFLFISTGHYVYP 494
>gi|254684082|ref|ZP_05147942.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. CNEVA-9066]
Length = 773
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIP 145
I ++ L+ HF Y + NIL +P LS +V+P +I ++ + + L
Sbjct: 358 ISLISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSF 417
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGSI 203
V++ GL++ +++ S+ G+ P V + +++ + I G +
Sbjct: 418 ANVLSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRI-SKGMV 476
Query: 204 MIGITIIILFTFPYSFSP 221
I I + + + P
Sbjct: 477 FIFAGIFLFISTGHYVYP 494
>gi|118479491|ref|YP_896642.1| DNA internalization-related competence protein [Bacillus
thuringiensis str. Al Hakam]
gi|118418716|gb|ABK87135.1| DNA internalization-related competence protein [Bacillus
thuringiensis str. Al Hakam]
Length = 773
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIP 145
I ++ L+ HF Y + NIL +P LS +V+P +I ++ + + L
Sbjct: 358 ISLISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSF 417
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGSI 203
V++ GL++ +++ S+ G+ P V + +++ + I G +
Sbjct: 418 ANVLSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRI-SKGMV 476
Query: 204 MIGITIIILFTFPYSFSP 221
I I + + + P
Sbjct: 477 FIFAGIFLFISTGHYVYP 494
>gi|49481367|ref|YP_038379.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|254721916|ref|ZP_05183705.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. A1055]
gi|49332923|gb|AAT63569.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 773
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIP 145
I ++ L+ HF Y + NIL +P LS +V+P +I ++ + + L
Sbjct: 358 ISLISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSF 417
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGSI 203
V++ GL++ +++ S+ G+ P V + +++ + I G +
Sbjct: 418 ANVLSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRI-SKGMV 476
Query: 204 MIGITIIILFTFPYSFSP 221
I I + + + P
Sbjct: 477 FIFAGIFLFISTGHYVYP 494
>gi|30264396|ref|NP_846773.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. Ames]
gi|47529847|ref|YP_021196.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. 'Ames Ancestor']
gi|49187219|ref|YP_030471.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. Sterne]
gi|165872029|ref|ZP_02216669.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. A0488]
gi|167638533|ref|ZP_02396809.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. A0193]
gi|177653305|ref|ZP_02935557.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. A0174]
gi|254736430|ref|ZP_05194136.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. Western North America USA6153]
gi|254750906|ref|ZP_05202945.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. Vollum]
gi|254757766|ref|ZP_05209793.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. Australia 94]
gi|30259054|gb|AAP28259.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. Ames]
gi|47504995|gb|AAT33671.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. 'Ames Ancestor']
gi|49181146|gb|AAT56522.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. Sterne]
gi|164712160|gb|EDR17697.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. A0488]
gi|167513381|gb|EDR88751.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. A0193]
gi|172081587|gb|EDT66659.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. A0174]
Length = 772
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIP 145
I ++ L+ HF Y + NIL +P LS +V+P +I ++ + + L
Sbjct: 358 ISLISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSF 417
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGSI 203
V++ GL++ +++ S+ G+ P V + +++ + I G +
Sbjct: 418 ANVLSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRI-SKGMV 476
Query: 204 MIGITIIILFTFPYSFSP 221
I I + + + P
Sbjct: 477 FIFAGIFLFISTGHYVYP 494
>gi|229186565|ref|ZP_04313726.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus BGSC 6E1]
gi|228596824|gb|EEK54483.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus BGSC 6E1]
Length = 663
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIP 145
I ++ L+ HF Y + NIL +P LS +V+P +I ++ + + L
Sbjct: 248 ISLISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSF 307
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGSI 203
V++ GL++ +++ S+ G+ P V + +++ + I G +
Sbjct: 308 ANVLSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRI-SKGMV 366
Query: 204 MIGITIIILFTFPYSFSP 221
I I + + + P
Sbjct: 367 FIFAGIFLFISTGHYVYP 384
>gi|225866306|ref|YP_002751684.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus 03BB102]
gi|225789679|gb|ACO29896.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus 03BB102]
Length = 663
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIP 145
I ++ L+ HF Y + NIL +P LS +V+P +I ++ + + L
Sbjct: 248 ISLISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSF 307
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGSI 203
V++ GL++ +++ S+ G+ P V + +++ + I G +
Sbjct: 308 ANVLSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRI-SKGMV 366
Query: 204 MIGITIIILFTFPYSFSP 221
I I + + + P
Sbjct: 367 FIFAGIFLFISTGHYVYP 384
>gi|326389877|ref|ZP_08211441.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter ethanolicus JW 200]
gi|325994145|gb|EGD52573.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter ethanolicus JW 200]
Length = 757
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 36/227 (15%), Positives = 80/227 (35%), Gaps = 30/227 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F + AI YFY + S + I+ + A IGT
Sbjct: 321 LWDVGFQLSFVATLAILYFYKPIREKLSMLN---------PKIRDLVALTLSAQIGTI-- 369
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG----VM 149
F + ++H I + L++NI+ +P+ + V ++ L ++ L P +
Sbjct: 370 ----PFTMYYYHYISIISLLSNIVIVPLANIAV----VLGFLSAMIGLIFPPLSYFINYI 421
Query: 150 AWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK--TNIRHIGSIMIG 206
++ I++I + +P + + L ++ + I +
Sbjct: 422 NIPVVEAILYITKLFNSFPYASINTIVPPLYVIVLYYGILTVLLSSFDKKTKKISIAIAL 481
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFS 253
+I +F + Y DL + + + ++ + +F+
Sbjct: 482 TFVIAIFFYNYLLPKDLEV----TFLDVGQGDSTFVRTPHGKTFLID 524
>gi|294776911|ref|ZP_06742372.1| ComEC/Rec2-like protein [Bacteroides vulgatus PC510]
gi|294449159|gb|EFG17698.1| ComEC/Rec2-like protein [Bacteroides vulgatus PC510]
Length = 650
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 49/122 (40%), Gaps = 5/122 (4%)
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL 131
++ ++ I A + + +I F PVY L AN++ P++ V+I +
Sbjct: 382 RVRHPVPRYIWGIVA-VSLAAQLGTAPVVIYKFAYFPVYFLPANLIVAPLV-LVIIYGSV 439
Query: 132 IAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
+ +L ++ + V+ GL+ ++ + + + + + + V L ++
Sbjct: 440 ASFVLSPFTV--LHIWVV-KGLNGVLRLLNDSMQWVGDLPVSHSGDIHLSLLQVGILYVL 496
Query: 192 FC 193
Sbjct: 497 LF 498
>gi|284048789|ref|YP_003399128.1| DNA internalization-related competence protein ComEC/Rec2
[Acidaminococcus fermentans DSM 20731]
gi|283953010|gb|ADB47813.1| DNA internalization-related competence protein ComEC/Rec2
[Acidaminococcus fermentans DSM 20731]
Length = 785
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 50/143 (34%), Gaps = 17/143 (11%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD---- 142
++ + FL+ HFH + + L+AN+L +P+LS V I +L L L
Sbjct: 366 SVPISAQLLSLPFLVIHFHTLSLVSLLANVLLVPVLSLCVT-GSAIGAILGSLGLILPGR 424
Query: 143 ---NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI-- 197
+ +M + L +A + G++P + + + V K
Sbjct: 425 PVLAVVSQLMGFALWGGEKLAQ---LPGTHLVTGQVPLWGWPLYFL-LIGAVLEKGWFQP 480
Query: 198 ---RHIGSIMIGITIIILFTFPY 217
R ++ + +
Sbjct: 481 FRPRLRRGTILAAGFGLGALVAF 503
>gi|89901253|ref|YP_523724.1| DNA internalization-like protein competence protein ComEC/Rec2
[Rhodoferax ferrireducens T118]
gi|89345990|gb|ABD70193.1| DNA internalization-related competence protein ComEC/Rec2
[Rhodoferax ferrireducens T118]
Length = 766
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 59/156 (37%), Gaps = 15/156 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F + V GL AN LAIP ++ VV P + + + L + V AW + + +
Sbjct: 396 FGQVSVVGLAANALAIPWVTLVVTPLAMAGVAVAPL------WDVAAWAIAALTWYLQML 449
Query: 164 SVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP- 221
+ + + P + V V+ ++V + ++ ++ + + P
Sbjct: 450 AALSFATITVAQAPLWAGVAGVIGGAVLVM---QLPWSLRLLGLPLMLPVLLWQAPRPPE 506
Query: 222 ---DLLISEKGNLVALVDKNT-LISNYSNPPSFIFS 253
+LL ++ G A++ + Y P F
Sbjct: 507 GQFELLAADIGQGNAVLVRTAHHALLYDAGPRFSRE 542
Score = 37.1 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 28/228 (12%), Positives = 70/228 (30%), Gaps = 21/228 (9%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
+ ++ A + RL P G + P +DF + +G+ A GY + PK
Sbjct: 120 LQRQPAALQAGERWQFTVRLKAPHGASNPFGYDFELWLWEQGLQATGYVRAGPKDPAPQR 179
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGT--YGSASASIFLI-------KHFHCIPVYGLIA 114
T+ + +Q +I + Y A++ + + G+ A
Sbjct: 180 LIQTY-RHPVELARQLVREQIVGQVEDRKYAGLIAALVVGDQNAIDRADWDVFRATGV-A 237
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGR 174
++++I L + L L + + L + A +
Sbjct: 238 HLMSISGLHVTMFAW------LATLVVGWLWRRSSRLCLWLPAPSAALVGGVLLAAAYAL 291
Query: 175 IPETSFV----TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+++ + ++ + + +++ P++
Sbjct: 292 FSGWGVPSQRTVLMLATVGLLRLSGKRWPWPHVWLLTCAVVVAVDPWA 339
>gi|329924043|ref|ZP_08279306.1| DNA internalization competence protein ComEC/Rec2-like protein
[Paenibacillus sp. HGF5]
gi|328940882|gb|EGG37190.1| DNA internalization competence protein ComEC/Rec2-like protein
[Paenibacillus sp. HGF5]
Length = 849
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
I + I +F+ + + + AN++ +P++S VV+P G++++L + +
Sbjct: 352 VGITVVAQLISFPLTIYYFNQVSLISVFANLILVPVISLVVLPLGMVSLL-----MGWVW 406
Query: 146 FGVMAW---GLDIIIHIAHRISVAHNEFCI--GRIPETSFVTIVVEFLLM 190
W + + HI RI N + P S I+ F+++
Sbjct: 407 MRGAGWLAAVTEWLNHITFRIVEWMNGSSVFMTLWPSPSLAWILCYFVVL 456
>gi|170707463|ref|ZP_02897917.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. A0389]
gi|190566917|ref|ZP_03019833.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis Tsiankovskii-I]
gi|229604357|ref|YP_002868614.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. A0248]
gi|170127707|gb|EDS96580.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. A0389]
gi|190561908|gb|EDV15877.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis Tsiankovskii-I]
gi|229268765|gb|ACQ50402.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. A0248]
Length = 692
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIP 145
I ++ L+ HF Y + NIL +P LS +V+P +I ++ + + L
Sbjct: 278 ISLISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSF 337
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGSI 203
V++ GL++ +++ S+ G+ P V + +++ + I G +
Sbjct: 338 ANVLSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRI-SKGMV 396
Query: 204 MIGITIIILFTFPYSFSP 221
I I + + + P
Sbjct: 397 FIFAGIFLFISTGHYVYP 414
>gi|270307472|ref|YP_003329530.1| DNA internalization competence protein [Dehalococcoides sp. VS]
gi|270153364|gb|ACZ61202.1| DNA internalization competence protein [Dehalococcoides sp. VS]
Length = 795
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 61/161 (37%), Gaps = 10/161 (6%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F S I M+ + I ++ L + +G +
Sbjct: 337 SFQLSFMSMLGLILVY-------PMLKELNLRLLERFGLSEGILRTALGIVLDGLGVSLA 389
Query: 94 ASASIF--LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
A A I+ L+ +F I + G +A +LA+P + F+++ + L A+L ++ + G + W
Sbjct: 390 AIAGIWPVLLYYFENISLIGPVATLLAMPAMPFIIVLSFLTALLGLVFPAGAVFMGYLTW 449
Query: 152 -GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
++ + + G P + I L ++
Sbjct: 450 LPCRYMLTVVSLTASLPGVLLAGIRPGAILMGIYYFLLGVL 490
>gi|65321697|ref|ZP_00394656.1| COG0658: Predicted membrane metal-binding protein [Bacillus
anthracis str. A2012]
gi|227817101|ref|YP_002817110.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. CDC 684]
gi|227007070|gb|ACP16813.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
anthracis str. CDC 684]
Length = 722
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIP 145
I ++ L+ HF Y + NIL +P LS +V+P +I ++ + + L
Sbjct: 308 ISLISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSF 367
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGSI 203
V++ GL++ +++ S+ G+ P V + +++ + I G +
Sbjct: 368 ANVLSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRI-SKGMV 426
Query: 204 MIGITIIILFTFPYSFSP 221
I I + + + P
Sbjct: 427 FIFAGIFLFISTGHYVYP 444
>gi|228929369|ref|ZP_04092392.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228830275|gb|EEM75889.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
Length = 693
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIP 145
I ++ L+ HF Y + NIL +P LS +V+P +I ++ + + L
Sbjct: 278 ISLISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSF 337
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGSI 203
V++ GL++ +++ S+ G+ P V + +++ + I G +
Sbjct: 338 ANVLSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRI-SKGMV 396
Query: 204 MIGITIIILFTFPYSFSP 221
I I + + + P
Sbjct: 397 FIFAGIFLFISTGHYVYP 414
>gi|196034371|ref|ZP_03101780.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus W]
gi|195992913|gb|EDX56872.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus W]
Length = 693
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIP 145
I ++ L+ HF Y + NIL +P LS +V+P +I ++ + + L
Sbjct: 278 ISLISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSF 337
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGSI 203
V++ GL++ +++ S+ G+ P V + +++ + I G +
Sbjct: 338 ANVLSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRI-SKGMV 396
Query: 204 MIGITIIILFTFPYSFSP 221
I I + + + P
Sbjct: 397 FIFAGIFLFISTGHYVYP 414
>gi|228948038|ref|ZP_04110323.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228811624|gb|EEM57960.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
Length = 693
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIP 145
I ++ L+ HF Y + NIL +P LS +V+P +I ++ + + L
Sbjct: 278 ISLISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSF 337
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGSI 203
V++ GL++ +++ S+ G+ P V + +++ + I G +
Sbjct: 338 ANVLSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRI-SKGMV 396
Query: 204 MIGITIIILFTFPYSFSP 221
I I + + + P
Sbjct: 397 FIFAGIFLFISTGHYVYP 414
>gi|78066886|ref|YP_369655.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia sp. 383]
gi|77967631|gb|ABB09011.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia sp. 383]
Length = 830
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 24/179 (13%), Positives = 60/179 (33%), Gaps = 7/179 (3%)
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
S W + + + ++ + + F + + G N AIP +S
Sbjct: 413 SSRLRAWGARAGRRIAEATRVQYAVTIG----LAPLTAAWFAQVSLSGPFGNAFAIPWVS 468
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
VV P ++A + + LD F + L+ ++ + ++ R+P+ + +
Sbjct: 469 SVVTPV-VLAGIALPAPLDAYAFRLAHAALEPMMTLLGHLADWPAGVFWLRMPDWPTLVL 527
Query: 184 V-VEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
V + + +R + + P L + + G +++ +
Sbjct: 528 ACVGVAWALMPRGWPLRWAAPLTWLPLVAPAADAPPPGGFRLTVLDVGQGASVLVETAR 586
>gi|315282385|ref|ZP_07870807.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
marthii FSL S4-120]
gi|313613967|gb|EFR87689.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
marthii FSL S4-120]
Length = 707
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNI 144
I + +S+ ++ HF+ G+ N+L +PI +++P + LL + S L I
Sbjct: 312 AISFVSTMMSSVVMMYHFYSFSWVGIFFNLLYVPIFXIIILPGCISVFLLSMCSPVLSAI 371
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF--CKTNIRHIGS 202
P V+ + + I + ++ + + P T + +++ +L+ F + IG
Sbjct: 372 PESVLTFLIQFIESFTNVLAKIPRQTIVTGRPNTIILVLIIGTILLFFYQWQKKKFPIGI 431
Query: 203 IMIGITII 210
+ +
Sbjct: 432 FIFFCLLC 439
>gi|228916957|ref|ZP_04080518.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228842678|gb|EEM87765.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 693
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIP 145
I ++ L+ HF Y + NIL +P LS +V+P +I ++ + + L
Sbjct: 278 ISLISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSF 337
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGSI 203
V++ GL++ +++ S+ G+ P V + +++ + I G +
Sbjct: 338 ANVLSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRI-SKGMV 396
Query: 204 MIGITIIILFTFPYSFSP 221
I I + + + P
Sbjct: 397 FIFAGIFLFISTGHYVYP 414
>gi|319792890|ref|YP_004154530.1| DNA internalization-related competence protein comec/rec2
[Variovorax paradoxus EPS]
gi|315595353|gb|ADU36419.1| DNA internalization-related competence protein ComEC/Rec2
[Variovorax paradoxus EPS]
Length = 779
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 54/134 (40%), Gaps = 8/134 (5%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F + + GL+AN +AIP ++ VV P + ++ L + V AW + + +
Sbjct: 407 FQQVSLVGLLANAIAIPWVTLVVTPLAMGGAVVTPL------WDVAAWAVQALAVLLQWS 460
Query: 164 SVAHNEFCIGRIPETSFVT--IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ P + LL + ++R +G ++ ++ P +
Sbjct: 461 AGLPFATLSMAAPPWWMAACGVAGGALLAMHLPWSMRALGLPLLLPVLLWQMPRPAAGEF 520
Query: 222 DLLISEKGNLVALV 235
+LL ++ G A++
Sbjct: 521 ELLAADIGQGNAVL 534
>gi|300704510|ref|YP_003746113.1| hypothetical protein RCFBP_20314 [Ralstonia solanacearum CFBP2957]
gi|299072174|emb|CBJ43506.1| conserved membrane protein of unknown function, ComEC/Rec2 domain
[Ralstonia solanacearum CFBP2957]
Length = 845
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/185 (11%), Positives = 48/185 (25%), Gaps = 10/185 (5%)
Query: 30 AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIG 89
F +F + A + + W+ + + I
Sbjct: 377 VMSAGFWLSFGAVAVIFLATRMAAADAGGNDRQSTWPRRAWRALCGGAR---------IQ 427
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM 149
+ + F + V AN LAIP++S V P LI +L
Sbjct: 428 LAVTFGLLPLTLLLFQQVSVVSAAANALAIPVVSLVTTPLALIGAVL-PEPWAQPVLAWA 486
Query: 150 AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITI 209
++ ++ + + + + ++ R G+ +
Sbjct: 487 EASFGWLVSWLDGLAAPAWSVWTAPVAPAWAWLLAIGGVPLLLAPGGHRAWAWRAQGVLL 546
Query: 210 IILFT 214
++
Sbjct: 547 LLPMV 551
>gi|229123864|ref|ZP_04253057.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus 95/8201]
gi|228659578|gb|EEL15225.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus 95/8201]
Length = 693
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIP 145
I ++ L+ HF Y + NIL +P LS +V+P +I ++ + + L
Sbjct: 278 ISLISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSF 337
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGSI 203
V++ GL++ +++ S+ G+ P V + +++ + I G +
Sbjct: 338 ANVLSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRI-SKGMV 396
Query: 204 MIGITIIILFTFPYSFSP 221
I I + + + P
Sbjct: 397 FIFAGIFLFISTGHYVYP 414
>gi|196044739|ref|ZP_03111973.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus 03BB108]
gi|196024227|gb|EDX62900.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus 03BB108]
Length = 693
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIP 145
I ++ L+ HF Y + NIL +P LS +V+P +I ++ + + L
Sbjct: 278 ISLISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSF 337
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGSI 203
V++ GL++ +++ S+ G+ P V + +++ + I G +
Sbjct: 338 ANVLSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIISVLMVWERRI-SKGMV 396
Query: 204 MIGITIIILFTFPYSFSP 221
I I + + + P
Sbjct: 397 FIFAGIFLFISTGHYVYP 414
>gi|119470092|ref|ZP_01612858.1| putative DNA internalization-related competence protein ComEC/Rec2
with Metallo-beta-lactamase superfamily domain
[Alteromonadales bacterium TW-7]
gi|119446513|gb|EAW27787.1| putative DNA internalization-related competence protein ComEC/Rec2
with Metallo-beta-lactamase superfamily domain
[Alteromonadales bacterium TW-7]
Length = 755
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 74/171 (43%), Gaps = 6/171 (3%)
Query: 71 KKISSIKQSFLNEIRANIGTYGSASAS--IFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
K + SFL + A I S F+ + V GL+ N++AIP LSF+++P
Sbjct: 363 KNVPHFTNSFLKVLFALITIQASLFIGLLPLSFYFFNGVSVAGLVINLVAIPFLSFILMP 422
Query: 129 AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL 188
++ + + ++ + GL I +++ IG I + V I
Sbjct: 423 CLILLTAISSVFDISMVIIFIDSGLAFIFTCLNKLPAGFGWLNIGIIGLS--VIIYAYIT 480
Query: 189 LMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKG-NLVALVDKN 238
L++F + R + + + + + I + + L + + G L+AL++K+
Sbjct: 481 LLIFYFSPYRRLAFLPLTM-LYIDYLLADKPTWKLHVFDVGHGLMALIEKD 530
>gi|310643092|ref|YP_003947850.1| DNA internalization-like competence protein comec/rec2
[Paenibacillus polymyxa SC2]
gi|309248042|gb|ADO57609.1| DNA internalization-like competence protein ComEC/Rec2
[Paenibacillus polymyxa SC2]
Length = 848
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 46/126 (36%), Gaps = 13/126 (10%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN-- 143
I + + +F+ + AN + +P+++++V+P G +A+ + L D
Sbjct: 349 VAITVTAQLVSFPMTVFYFNQFSLLSFAANFVLVPLITYIVLPLGTVAMGMAFLWGDGAR 408
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE--------FLLMVFCKT 195
I D+ + ++V + I +S + V+ + T
Sbjct: 409 ILAWPAEQLNDLTFWLVKWLNV---DDAYVSIWPSSSILWVLAYYAALYSVLYWLKTWLT 465
Query: 196 NIRHIG 201
+ R G
Sbjct: 466 SRRKTG 471
>gi|197284611|ref|YP_002150483.1| hypothetical protein PMI0717 [Proteus mirabilis HI4320]
gi|194682098|emb|CAR41675.1| putative membrane protein [Proteus mirabilis HI4320]
Length = 789
Score = 48.3 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 7/130 (5%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDII 156
F F ++ L+ N+ A+PI+SF+ +P + + L L I + + ++
Sbjct: 411 PFQYYLFGGGNLFSLLVNLWAVPIISFITVPLIMCGLFTAFLPVLQPIIWSWVDQSINWA 470
Query: 157 IHIA-HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
A + ++ + + L+V + RH I+I I +
Sbjct: 471 FFCAPYFLTYWQPCGAVP-----WLFALSGIMTLLVIKMSWWRHHVIILITIATFLYCEL 525
Query: 216 PYSFSPDLLI 225
+S D I
Sbjct: 526 SFSKRYDWRI 535
>gi|163816648|ref|ZP_02208011.1| hypothetical protein COPEUT_02838 [Coprococcus eutactus ATCC 27759]
gi|158447905|gb|EDP24900.1| hypothetical protein COPEUT_02838 [Coprococcus eutactus ATCC 27759]
Length = 808
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 16/153 (10%), Positives = 57/153 (37%), Gaps = 16/153 (10%)
Query: 40 SSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRAN--------IGTY 91
GI+ + + P ++ + ++ ++ L +I + I
Sbjct: 329 MMTSAGIACVIQAVADPYIVMDAGFQLSFAAVLGIAVVDPMLEKIVGHGGRLSALRINVS 388
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVV---IPAGLIAILLMILSLDNIPFGV 148
+ + + ++ +F+ P+Y ++ N++ +P +S ++ + A ++ + ++
Sbjct: 389 VTLTTTPLVVYYFYQFPLYSVVLNMVVVPFVSVLIFCSMAAIFFGMMPGVWGFASVTAQF 448
Query: 149 MAWGLDIIIHIAHRI-----SVAHNEFCIGRIP 176
+A + I+ + + +G +
Sbjct: 449 LAMPVRYILAAYRALCELMCKLPEYSVNVGHVS 481
>gi|260592561|ref|ZP_05858019.1| ComEC/Rec2 family protein [Prevotella veroralis F0319]
gi|260535607|gb|EEX18224.1| ComEC/Rec2 family protein [Prevotella veroralis F0319]
Length = 514
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 62/163 (38%), Gaps = 9/163 (5%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + + +I FY P MI + + + + A +GT
Sbjct: 351 LFDIGFQLSFASVWSIMLFY--PLMIAMFRKGKLLHFTIMRWLCSMIALSVAAQLGTL-- 406
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
++ +F + + L +++A+P + ++ GL+ + + S ++ +
Sbjct: 407 ----PLIVYYFDRVSLVSLPCSLIAVPCTTLIIYMTGLLFLFAPLSSFSLFISKCLSITI 462
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN 196
+ + + H I+ + +I +S I+ L+ +
Sbjct: 463 EWLNNTLHWIACLPGA-SMEQIHISSLHIILYYVALLTAWRLW 504
>gi|229104956|ref|ZP_04235612.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock3-28]
gi|228678450|gb|EEL32671.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock3-28]
Length = 715
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 22/95 (23%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F + I S I+ + I + +
Sbjct: 268 GFQFSFVGSFALI----------------LSAPILLRHSNGVIRNAIYISIISQL----- 306
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
++ L+ HF Y + N++ +P LS +V+P
Sbjct: 307 -VSTPILLYHFGYFSPYSIFLNLIYVPFLSILVLP 340
>gi|319643285|ref|ZP_07997913.1| competence protein [Bacteroides sp. 3_1_40A]
gi|317385189|gb|EFV66140.1| competence protein [Bacteroides sp. 3_1_40A]
Length = 639
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 49/122 (40%), Gaps = 5/122 (4%)
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL 131
++ ++ I A + + +I F PVY L AN++ P++ V+I +
Sbjct: 371 RVRHPVPRYIWGIVA-VSLAAQLGTAPVVIYKFAYFPVYFLPANLVVAPLV-LVIIYGSV 428
Query: 132 IAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
+ +L ++ + V+ GL+ ++ + + + + + + V L ++
Sbjct: 429 ASFVLSPFTV--LHIWVV-KGLNGVLRLLNDSMQWVGDLPVSHSGDIHLSLLQVGILYVL 485
Query: 192 FC 193
Sbjct: 486 LF 487
>gi|254882156|ref|ZP_05254866.1| competence protein [Bacteroides sp. 4_3_47FAA]
gi|254834949|gb|EET15258.1| competence protein [Bacteroides sp. 4_3_47FAA]
Length = 650
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 49/122 (40%), Gaps = 5/122 (4%)
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL 131
++ ++ I A + + +I F PVY L AN++ P++ V+I +
Sbjct: 382 RVRHPVPRYIWGIVA-VSLAAQLGTAPVVIYKFAYFPVYFLPANLVVAPLV-LVIIYGSV 439
Query: 132 IAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
+ +L ++ + V+ GL+ ++ + + + + + + V L ++
Sbjct: 440 ASFVLSPFTV--LHIWVV-KGLNGVLRLLNDSMQWVGDLPVSHSGDIHLSLLQVGILYVL 496
Query: 192 FC 193
Sbjct: 497 LF 498
>gi|159900163|ref|YP_001546410.1| ComEC/Rec2-related protein [Herpetosiphon aurantiacus ATCC 23779]
gi|159893202|gb|ABX06282.1| ComEC/Rec2-related protein [Herpetosiphon aurantiacus ATCC 23779]
Length = 493
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 52/150 (34%), Gaps = 13/150 (8%)
Query: 47 SAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHC 106
+A + + P + W+ + + + + A I T ++ HF
Sbjct: 340 TASLFAWGKPIEAQLRQW---LRWRWLEWMIEPLTATLAAQIWTL------PIILYHFGN 390
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRIS 164
+ + +AN+L +P++ +++ +G + L + L + + L ++ A ++
Sbjct: 391 LSLIAPVANVLIVPVVP-LIMASGAMLACLGLFGRWLALLALPITWAALTWVVEAAEWLA 449
Query: 165 VAHN-EFCIGRIPETSFVTIVVEFLLMVFC 193
I R + V +
Sbjct: 450 DLSWAAVEIPRFGMSWLVLAYGLSVGAKAW 479
>gi|299783043|gb|ADJ41041.1| Competence protein [Lactobacillus fermentum CECT 5716]
Length = 745
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 67/201 (33%), Gaps = 14/201 (6%)
Query: 100 LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIII 157
+ FH + L+ N L IP S +++P + +L L L + + +
Sbjct: 363 SVYQFHSLS---LVINYLMIPFFSLIIMPLAIGGGILYPLFPGLGAVVNAGLILFHRGLA 419
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+A+ G++P V + + L MV + ++ + + FP
Sbjct: 420 ALAN----LPGTITFGKVPAW--VAVSLVLLTMVTWEKRGAVKWLVLGYVVTFVWLHFPL 473
Query: 218 SFSPDLLISEKGNLVALVDK---NTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDL 274
+ +G+ + + + ++ + +F WK + +A L
Sbjct: 474 QGEVTFVDIGQGDCIIIREPFNRRVMMIDTGGKLNFQTEGWKKRTNSATDKATSTSLNYL 533
Query: 275 QEKNQSSLKEILRSMQPRKFL 295
+ + L + S +
Sbjct: 534 KSEGIDHLDAVWLSHSDADHI 554
>gi|238795853|ref|ZP_04639366.1| hypothetical protein ymoll0001_25250 [Yersinia mollaretii ATCC
43969]
gi|238720316|gb|EEQ12119.1| hypothetical protein ymoll0001_25250 [Yersinia mollaretii ATCC
43969]
Length = 727
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 45/120 (37%), Gaps = 8/120 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM-AWGLDIIIHIAHR 162
FH + ++ + AN+ A+P++S + +P L+A+ +L F VM + ++
Sbjct: 353 FHGVSLFSIPANLWAVPLISLLTVPCVLLAMAFTLLPTIAGVFWVMADMSITAVL----- 407
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
+ N G + + + S IG+ + + +S D
Sbjct: 408 --LPLNHLRAGWFHTGVTSVALGYGGWLGILIWRFQWWRSYPIGVVALCVNLALFSHRRD 465
>gi|302389459|ref|YP_003825280.1| DNA internalization-related competence protein ComEC/Rec2
[Thermosediminibacter oceani DSM 16646]
gi|302200087|gb|ADL07657.1| DNA internalization-related competence protein ComEC/Rec2
[Thermosediminibacter oceani DSM 16646]
Length = 772
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 36/224 (16%), Positives = 75/224 (33%), Gaps = 28/224 (12%)
Query: 4 ITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE 63
I +K DP G L S F F +F++ + I +F + + S
Sbjct: 309 IGRKSDPLN-SLGFAGFLLLLANSFNIFSASFQLSFAAT---LGIILFFKPLQRFFVSIP 364
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ + S I A + + FL +FH I + G + N + +P+
Sbjct: 365 AF----------FRDSLAVLISAQLLLF------PFLAYYFHKISLAGFLLNFIIVPLAG 408
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
++ L I+ + + + ++ + S F +P + +
Sbjct: 409 AALLGGFLTGIVSFLPFFAVPIVKITGVLVFLMDWVTTLASRLP--FATFSVPSLGPLAV 466
Query: 184 VVEFLLMVFCKTNIRHIG------SIMIGITIIILFTFPYSFSP 221
+ F L+ + +G +IG+ +I+ + P
Sbjct: 467 LAYFALIAAVFAPVEALGIKRRQKFAVIGLCFLIVAWSIFWVKP 510
>gi|332705351|ref|ZP_08425429.1| ComEC/Rec2-related protein [Lyngbya majuscula 3L]
gi|332355711|gb|EGJ35173.1| ComEC/Rec2-related protein [Lyngbya majuscula 3L]
Length = 786
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 22/198 (11%), Positives = 66/198 (33%), Gaps = 38/198 (19%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + +G + P +I W I+S+ + +
Sbjct: 368 GFQLSFLAT------LGLLITAPGIIQ----RLDWLPPAIASL---------VAVPIAAA 408
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ F + Y + +++A P++S + + G+++ L + + GL
Sbjct: 409 VWTLPLQLYVFQVVASYSIPVSVIATPLISIITL-GGIVSALA------GLIWPTAGSGL 461
Query: 154 DIIIH---------IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI--RHIGS 202
+++ + + + +G+I + + + + R
Sbjct: 462 AWLLYYPTHGLMGLVEFFNQLPGSSVAVGKISLGQL-LFLYGLIALACLIKWLHPRWWLI 520
Query: 203 IMIGITIIILFTFPYSFS 220
++ +T+++L + +
Sbjct: 521 SLVAVTVVVLPQWQQASK 538
>gi|314923142|gb|EFS86973.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL001PA1]
Length = 762
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 60/203 (29%), Gaps = 19/203 (9%)
Query: 49 IGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP 108
+G++ S W+ ++ + + + + +
Sbjct: 329 VGFWLSACATAGILWWAQPWS---VAMEWAPAWLAVGVTVPWAAQVTTQPVITWMAGTVS 385
Query: 109 VYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-----GVMAWGLDIIIHIAHRI 163
GL+AN+ A P V PA + ++ +L+ P + W + II IAH
Sbjct: 386 TTGLVANLAAAP----FVPPASALGMVTGLLAFIWPPLGTPFGRLAGWCVQPIIWIAHFG 441
Query: 164 SVAHNEFCIGRIPETSFVTIV-----VEFLLMVFCKTNI--RHIGSIMIGITIIILFTFP 216
+ A + + + + + G +I ++
Sbjct: 442 AKAPSGLIRWPAGGWALGVLAGLCVGLALITPTVLARPWLTALAGLAVIAAMVVRPPLPG 501
Query: 217 YSFSPDLLISEKGNLVALVDKNT 239
+ + I + G A + +
Sbjct: 502 WPGQWQVAICDVGQGSAALVRAG 524
>gi|313892614|ref|ZP_07826201.1| putative DNA internalization competence protein ComEC/Rec2-like
protein [Dialister microaerophilus UPII 345-E]
gi|313119011|gb|EFR42216.1| putative DNA internalization competence protein ComEC/Rec2-like
protein [Dialister microaerophilus UPII 345-E]
Length = 727
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 69/187 (36%), Gaps = 15/187 (8%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI---PAGLIAILLMILSLD 142
A + ++ +FH P+Y + +NI P+L FV+I A + +L L
Sbjct: 383 AALSISAQLLIVPIILYNFHNFPIYFIFSNIFVTPLLDFVIIFGLTAAIFVWILPP--LS 440
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
+ + L+ + I H I+ + S V +L V+ IR
Sbjct: 441 GGILYITDYILEFSLIINHFIANLPKARYLTGGMNLSEVLTYYGAILFVYVNKKIRKEKI 500
Query: 203 IMIG-------ITIIILFTFPYSFSPDLLISEKGNLV--ALVDKNTLISNY-SNPPSFIF 252
+ IG + I ++ ++I + G V ++ KN I Y F
Sbjct: 501 MYIGSISLLSLLIITTIYLKITEEKEYVIIPDTGKTVSAGIISKNEKILYYEYKGNRFSG 560
Query: 253 SQWKSAL 259
++KS L
Sbjct: 561 KEFKSVL 567
>gi|229075999|ref|ZP_04208972.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock4-18]
gi|228707111|gb|EEL59311.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock4-18]
Length = 715
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 22/95 (23%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F + I S + I+ + I + +
Sbjct: 268 GFQFSFVGSFALI----------------LSAPILLRRSNGVIRNAIYISIISQL----- 306
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
++ L+ HF Y + N + +P LS +V+P
Sbjct: 307 -VSTPILLYHFGYFSPYSIFLNFIYVPFLSIIVLP 340
>gi|313499950|gb|ADR61316.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas putida BIRD-1]
Length = 657
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISV 165
+ + +AN++A+P +S V+P L+ L++ L + + LD++ ++
Sbjct: 295 VSLSAPLANLVAVPWVSLAVLPLALLGTLMLPLAGVGEALLWLAGGLLDVLFRGLALVAQ 354
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGI 207
+ +P +++ + + LL++ + +R +G +M+
Sbjct: 355 QRPAWVPPALPLWAWLLVCLGALLILLPRGVPLRGLGGVMLLA 397
Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 22/196 (11%), Positives = 57/196 (29%), Gaps = 11/196 (5%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P A L P G P D + + A G + + +
Sbjct: 39 PLRAGEQWRLAVTLQRPDGLLNPHGPDREAQLLARRVGATGTVKAGQLLAPVAGGWRDAL 98
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+++ ++ + + + + + + G + ++L I ++
Sbjct: 99 RQRLLMVEANGRQAALVALVLGDG---AGLAREDWQTLQATGTV-HLLVISGQHIGLVAG 154
Query: 130 GLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL 188
L ++ L L +A ++A+ G +P ++
Sbjct: 155 LLYGLVA---GLARWGLWPARLPWLPWACGLAMAAALAYGWLAGGGVPVQRACLMLA--- 208
Query: 189 LMVFCKTNIRHIGSIM 204
+++ + RH+G
Sbjct: 209 VVLLWRLRFRHLGVFF 224
>gi|304415502|ref|ZP_07396139.1| hypothetical protein REG_1906 [Candidatus Regiella insecticola
LSR1]
gi|304282641|gb|EFL91167.1| hypothetical protein REG_1906 [Candidatus Regiella insecticola
LSR1]
Length = 738
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 13/146 (8%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAIL--LMILSLDNIPFGVMAWGLDIIIHIAH 161
FH + + L+AN+ A+PI+S + +PA L+A+L LM + + V +++I
Sbjct: 390 FHGVSLSALVANMWAVPIVSIITVPAVLMALLTSLMPAVASWL-WYVADLSINMI----- 443
Query: 162 RISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF-- 219
+ + + + S + +L ++ + SI + + ++L+ F Y
Sbjct: 444 FFPLNTLQKGWLAVGKNSILASYSGWLAVIIWRFQWWKSHSIAVLVLCLVLWGFSYGKQE 503
Query: 220 ---SPDLLISEKGNLVALVDKNTLIS 242
D+L G V + +I
Sbjct: 504 YRWRVDMLDVGHGLAVVIERAGKVII 529
>gi|228935645|ref|ZP_04098459.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228824005|gb|EEM69823.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
Length = 693
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIP 145
I ++ L+ HF Y + NIL +P LS +V+P +I ++ + + L
Sbjct: 278 ISLISQLVSTPILLYHFGYYSPYSIFLNILYVPFLSLIVLPCSIIILICLPIIPFLAKSF 337
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVE-FLLMVFCKTNIRHIGSI 203
V++ GL++ +++ S+ G+ P V F +++ + I G +
Sbjct: 338 ANVLSIGLNLSNDFLSYCESLPFTRLNFGQTPILLVALYCVSIFSVLMVWERRI-SKGMV 396
Query: 204 MIGITIIILFTFPYSFSP 221
I I + + + P
Sbjct: 397 FIFAGIFLFISTGHYVYP 414
>gi|311745830|ref|ZP_07719615.1| putative ComEC/Rec2 family protein [Algoriphagus sp. PR1]
gi|126576033|gb|EAZ80311.1| putative ComEC/Rec2 family protein [Algoriphagus sp. PR1]
Length = 643
Score = 47.9 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 50/142 (35%), Gaps = 10/142 (7%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
+ + + +FH P Y L+ N++ IP+ +F+++ + I L+ +
Sbjct: 384 IVAVSIAAQLATFPLTLFYFHAFPTYFLLGNLIIIPL-AFLIM---HLGIPLLAFGWVPV 439
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS------FVTIVVEFLLMVFCKTNIR 198
++ + I + I + +I + S F+ V+ + + R
Sbjct: 440 LGELLGVLVSKTILFQNFIVLRIQSLPYPQIDQISIEWYSMFLVWVLLLIWYCWPDMKKR 499
Query: 199 HIGSIMIGITIIILFTFPYSFS 220
+ I + + Y +
Sbjct: 500 KLAWIGLFSLFLWAGLRVYDQT 521
>gi|295092102|emb|CBK78209.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium cf. saccharolyticum K10]
Length = 859
Score = 47.5 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 60/183 (32%), Gaps = 39/183 (21%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + + AIG+ ++ S WT +
Sbjct: 372 AFQLSFGAVF----AIGWAGK--ELTDSFRCRRGWTRAL--------------AVSAAIQ 411
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAW 151
++ HF PVYG++ N + IP++++VV AGL + L +++ F +
Sbjct: 412 LVTGPLVLWHFFEYPVYGILLNFIVIPLMTYVV-GAGLAGLFLGLMAELFSACSFSAVFE 470
Query: 152 GLDIII----------------HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
GL ++ + + I P + L ++ +T
Sbjct: 471 GLFGLLAAGSMGTCHYILAFYEWLCRAVGKLPIYSLILGRPALWKLAAYYLMLSVLLWRT 530
Query: 196 NIR 198
R
Sbjct: 531 AER 533
>gi|282854161|ref|ZP_06263498.1| ComEC/Rec2-like protein [Propionibacterium acnes J139]
gi|282583614|gb|EFB88994.1| ComEC/Rec2-like protein [Propionibacterium acnes J139]
Length = 764
Score = 47.5 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 60/203 (29%), Gaps = 19/203 (9%)
Query: 49 IGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP 108
+G++ S W+ ++ + + + + +
Sbjct: 331 VGFWLSACATAGILWWAQPWS---VAMEWAPAWLAVGVTVPWAAQVTTQPVITWMAGTVS 387
Query: 109 VYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-----GVMAWGLDIIIHIAHRI 163
GL+AN+ A P V PA + ++ +L+ P + W + II IAH
Sbjct: 388 TTGLVANLAAAP----FVPPASALGMVTGLLAFIWPPLGTPFGRLAGWCVQPIIWIAHFG 443
Query: 164 SVAHNEFCIGRIPETSFVTIV-----VEFLLMVFCKTNI--RHIGSIMIGITIIILFTFP 216
+ A + + + + + G +I ++
Sbjct: 444 AKAPSGLIRWPAGGWALGVLAGLCVGLALITPTVLARPWLTALAGLAVIAAMVVRPPLPG 503
Query: 217 YSFSPDLLISEKGNLVALVDKNT 239
+ + I + G A + +
Sbjct: 504 WPGQWQVAICDVGQGSAALVRAG 526
>gi|161503889|ref|YP_001571001.1| hypothetical protein SARI_01979 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865236|gb|ABX21859.1| hypothetical protein SARI_01979 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 729
Score = 47.5 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 355 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEGVWFLTDRALAALFYLL 414
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I + + +L ++ + NI + + ++L ++P
Sbjct: 415 NAL-----PQGWVNIDQRWQWLTLSPWLTLIAWRLNI-WRTWPAVCFSGLLLMSWPLWRP 468
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 469 ----INPSGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPGGDSGQQVIIPWLRWHNLT 524
Query: 276 EKN 278
+
Sbjct: 525 PEG 527
>gi|150390808|ref|YP_001320857.1| ComEC/Rec2-related protein [Alkaliphilus metalliredigens QYMF]
gi|149950670|gb|ABR49198.1| ComEC/Rec2-related protein [Alkaliphilus metalliredigens QYMF]
Length = 488
Score = 47.5 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 5/114 (4%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS-FVVIPAGLIAILLMILSLDNIP 145
I + HF + V L+ NI +PIL+ +++ AI + L +
Sbjct: 373 AITLAAQIGTIPIIAYHFQQVSVVSLLTNIAIVPILAPLLIVALCGFAISFISFGLSQLI 432
Query: 146 FGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTNIR 198
+ L I I + + G I I+ +L++ + N+R
Sbjct: 433 AYSVNGLLSYIFWIMEGANQIPFSSLSTGAID---IFVILCYYLILTAIRLNLR 483
>gi|314966911|gb|EFT11010.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL082PA2]
gi|315093171|gb|EFT65147.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL060PA1]
gi|315103324|gb|EFT75300.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL050PA2]
gi|315105529|gb|EFT77505.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL030PA1]
gi|327327732|gb|EGE69508.1| putative ComE operon protein 3 [Propionibacterium acnes HL103PA1]
Length = 762
Score = 47.5 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 60/203 (29%), Gaps = 19/203 (9%)
Query: 49 IGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP 108
+G++ S W+ ++ + + + + +
Sbjct: 329 VGFWLSACATAGILWWAQPWS---VAMEWAPAWLAVGVTVPWAAQVTTQPVITWMAGTVS 385
Query: 109 VYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-----GVMAWGLDIIIHIAHRI 163
GL+AN+ A P V PA + ++ +L+ P + W + II IAH
Sbjct: 386 TTGLVANLAAAP----FVPPASALGMVTGLLAFIWPPLGTPFGRLAGWCVQPIIWIAHFG 441
Query: 164 SVAHNEFCIGRIPETSFVTIV-----VEFLLMVFCKTNI--RHIGSIMIGITIIILFTFP 216
+ A + + + + + G +I ++
Sbjct: 442 AKAPSGLIRWPAGGWALGVLAGLCVGLALITPTVLARPWLTALAGLAVIAAMVVRPPLPG 501
Query: 217 YSFSPDLLISEKGNLVALVDKNT 239
+ + I + G A + +
Sbjct: 502 WPGQWQVAICDVGQGSAALVRAG 524
>gi|229098796|ref|ZP_04229734.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock3-29]
gi|228684640|gb|EEL38580.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock3-29]
Length = 715
Score = 47.5 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 22/95 (23%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F + I S I+ + I + +
Sbjct: 268 GFQFSFVGSFALI----------------LSAPILLRHSNGIIRNAIYISIISQL----- 306
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
++ L+ HF Y + N++ +P LS +V+P
Sbjct: 307 -VSTPILLYHFGYFSPYSIFLNLIYVPFLSILVLP 340
>gi|229117822|ref|ZP_04247186.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock1-3]
gi|228665619|gb|EEL21097.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock1-3]
Length = 715
Score = 47.5 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 22/95 (23%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F + I S I+ + I + +
Sbjct: 268 GFQFSFVGSFALI----------------LSAPILLRHSNGIIRNAIYISIISQL----- 306
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
++ L+ HF Y + N++ +P LS +V+P
Sbjct: 307 -VSTPILLYHFGYFSPYSIFLNLIYVPFLSILVLP 340
>gi|157375962|ref|YP_001474562.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella sediminis HAW-EB3]
gi|157318336|gb|ABV37434.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella sediminis HAW-EB3]
Length = 767
Score = 47.5 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 57/147 (38%), Gaps = 19/147 (12%)
Query: 79 SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL--- 135
+ I+ + ++F F + YGL+ N L +P S VVIP +++++
Sbjct: 364 TLFWSIQWRLSLGLGLLQALF----FGGMSPYGLLFNFLFVPWFSIVVIPLSILSLVMWG 419
Query: 136 -LMILSLD-NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
M + + + F ++ L +++ + + P + + + LM
Sbjct: 420 AAMAIGFELSGIFAIVDISLAPMLYAFTIFKQLPSAW----FPISDKMIMAFALGLMGLW 475
Query: 194 ------KTNIRHIGSIMIGITIIILFT 214
K + + S+ + ++ L++
Sbjct: 476 LITHSIKVKWKLVSSVFLLPALLTLWS 502
>gi|255536110|ref|YP_003096481.1| Competence protein [Flavobacteriaceae bacterium 3519-10]
gi|255342306|gb|ACU08419.1| Competence protein [Flavobacteriaceae bacterium 3519-10]
Length = 592
Score = 47.5 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 79/202 (39%), Gaps = 24/202 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + + GI ++ + P + Y N + ++ + S +I
Sbjct: 337 GFQLSFLAVF-GI----FWLNQPILNYLPRPKNNFQNFLVNVVSVSVAAQIV-------- 383
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM-AWG 152
++ +FH ++AN++ IP ++I L+ +L SL+ ++
Sbjct: 384 --TLPLVLFYFHQYSFISILANLIVIPFSEVLII-FSLLMTVLTAFSLEFKLLNLIYDSF 440
Query: 153 LDIIIHIAHRISVAHNEFC---IGRIPETSFVTIVVEFLLMVFCK----TNIRHIGSIMI 205
+ + + H +VA F +PE +++ FL + +R + +++
Sbjct: 441 VSAALEMIHLFAVAGFAFYRMIPMSMPEVLVSFVMIYFLRFAILRFTIKNAMRIVYFLLL 500
Query: 206 GITIIILFTFPYSFSPDLLISE 227
+ + +L + + ++L+
Sbjct: 501 FVALRMLLNYKANEIDEVLVHR 522
>gi|167586760|ref|ZP_02379148.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia ubonensis Bu]
Length = 784
Score = 47.5 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/213 (14%), Positives = 71/213 (33%), Gaps = 3/213 (1%)
Query: 30 AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIG 89
F +F + + A+ + ++ + E + + + +
Sbjct: 329 VLSAGFWLSFGAVAVILLAVSGWRAVQEPGAEPEGAGFGERLRAWRRRAIRRVAEASRVQ 388
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM 149
+ + F I V G +AN AIP +S VV P ++A + + LD F +
Sbjct: 389 YAVTIGLAPLTAAWFAQISVSGPLANAFAIPWVSSVVTPI-VLAGIALPAPLDAAAFRLA 447
Query: 150 AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV-VEFLLMVFCKTN-IRHIGSIMIGI 207
LD ++ R++ +P+ + + V ++ + +R +
Sbjct: 448 RASLDPMMAALERLADWPRSVFWLPMPDWPVLMLACVGVAWVLLPRGWPLRWAAPLTWLP 507
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ P L + + G A++ +
Sbjct: 508 LVAPAPDRPPDGGFRLTVVDVGQGAAVLVETAR 540
>gi|224456415|ref|ZP_03664888.1| putative ComEC/Rec2-related protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254370024|ref|ZP_04986031.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|151568269|gb|EDN33923.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|282158476|gb|ADA77867.1| Putative ComEC/Rec2-related protein [Francisella tularensis subsp.
tularensis NE061598]
Length = 422
Score = 47.5 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG----- 152
+ +F V ++ANI+AIP++SFV++P L+ +LL + ++ +M
Sbjct: 81 PISVYYFGGFSVVSILANIVAIPLVSFVIVPLLLLCLLLSFIGINLWLLPMMFLKLLVAY 140
Query: 153 LDIIIHIAHRISVAH 167
L + + A IS
Sbjct: 141 LSFLTNYAGFISYWS 155
>gi|119486029|ref|ZP_01620091.1| ComEC/Rec2-related protein [Lyngbya sp. PCC 8106]
gi|119456804|gb|EAW37932.1| ComEC/Rec2-related protein [Lyngbya sp. PCC 8106]
Length = 832
Score = 47.5 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 21/170 (12%), Positives = 65/170 (38%), Gaps = 25/170 (14%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F + +G S+P +I + W I+S+ + S
Sbjct: 403 GFQFSFLAT------LGLLVSVPPII----NRLDWIPPTIASLLA---------VPLAAS 443
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAW 151
+ F+ + Y ++ N++ +P ++ + + GL A ++ + + + ++ +
Sbjct: 444 IWTVPLQLYVFNVVSPYSILVNVITVPFVAVITL-GGLFAGVVALFWPTAGSAISALLEY 502
Query: 152 GLDIIIHIAHRISVAHN-EFCIGRIPETSFVTI--VVEFLLMVFCKTNIR 198
+ ++ + S +G + + + + ++ + ++ + R
Sbjct: 503 PVGGLLALVRFFSQQPGNSMALGSLSQFQLIALYSLIGLVWLIGSQREAR 552
Score = 42.5 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 57/186 (30%), Gaps = 18/186 (9%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
+ TI L P P+ PG FD F +Y A +S S
Sbjct: 198 QATGLHPGATIAVTGSLYKPQPPSNPGAFD--FRAYLARQGAFAGLKGRYLTSLTSTSGQ 255
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL--------IANILA 118
TW W +++Q + +G + S ++ Y + +A+ILA
Sbjct: 256 TWGWW---AVRQRIVRAQVQGLGIPKGSVVSAMVLGRRAVDLPYDVRDQFVQVGLAHILA 312
Query: 119 IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
++ ++A+ P + G+ ++ + + +
Sbjct: 313 ASGFHVSLVLGVVLALSRA-----ASPRQRLTIGMIALLAYVGLTGASPSVLRAALMGLA 367
Query: 179 SFVTIV 184
+ +
Sbjct: 368 ALIGFA 373
>gi|218248812|ref|YP_002374183.1| ComEC/Rec2-like protein [Cyanothece sp. PCC 8801]
gi|218169290|gb|ACK68027.1| ComEC/Rec2-related protein [Cyanothece sp. PCC 8801]
Length = 748
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 27/214 (12%), Positives = 80/214 (37%), Gaps = 36/214 (16%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F S + I +IP ++ + I+ + + +
Sbjct: 361 GFQFSFLSTFGLI------VTIPPLMKRLDWLPPAIATLIAVPLAATIWVL--------- 405
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAW 151
+ F + Y + NI+ P+++ + I G+I+ + +S L + ++ +
Sbjct: 406 ----PLSLYKFSILATYSIPTNIITSPLITAISI-GGMISSAIAFISPILGSFVVKILYY 460
Query: 152 GLDIIIHIAH-RISVAHNEFCIGRIPETSFVTI--VVEFLLMV-FCKTNIRHIGSIMIGI 207
+ +I + + + + + +G++ + I ++ + + F + + +G+
Sbjct: 461 PVYFLIKLLEIIVHLPGSYYAVGKLSLGVMLLIYVILVLIWLNPFWQRYWKLAALFSLGL 520
Query: 208 TIIILF----------TFPYSFSPDLLISEKGNL 231
I+ + +P ++I ++G +
Sbjct: 521 IILPIIYQNLTLIKVTILEAKSNPVVVIQDRGKV 554
>gi|160900512|ref|YP_001566094.1| DNA internalization-like competence protein ComEC/Rec2 [Delftia
acidovorans SPH-1]
gi|160366096|gb|ABX37709.1| DNA internalization-related competence protein ComEC/Rec2 [Delftia
acidovorans SPH-1]
Length = 832
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 53/152 (34%), Gaps = 12/152 (7%)
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
S + + + F + + GL+AN+ AIP ++FVV P L+ L P
Sbjct: 439 SLALAPLGLMLFGQLSLSGLLANLAAIPWVTFVVTPLALLGAL-------WPPLW-TGAA 490
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN----IRHIGSIMIGIT 208
L + + + + + ++P++ + + R G M
Sbjct: 491 LALAPLLELLQWLDQWAWAVVQLPQSPLWAGLAALCGGLALVAPVPAGWRCWGLAMCLPA 550
Query: 209 IIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ P DL+ + G A++ +
Sbjct: 551 LWWPSPAPAHGEFDLMAVDIGQGNAVLVRTAR 582
>gi|305666296|ref|YP_003862583.1| competence protein [Maribacter sp. HTCC2170]
gi|88708288|gb|EAR00525.1| competence protein [Maribacter sp. HTCC2170]
Length = 672
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 53/133 (39%), Gaps = 18/133 (13%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHN-TWTWKKISSIKQSFLNEIRANIGTYGS 93
FD F Y + AI + Y + + + ++ W+ +S +
Sbjct: 350 FDVGFQMSYAAVFAIVWIYPLLQRFWYPKNWLLNKGWQLLS-------------VSIAAQ 396
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +FH P I+N++ +P L ++ GL +++ ++ LD P ++
Sbjct: 397 IGVVPISLYYFHQFPGLFFISNLVIVPFLGLIL---GLGIMVIALILLDFAPNSLIEL-Y 452
Query: 154 DIIIHIAHRISVA 166
+++I + + +
Sbjct: 453 NLLIGVMNSVIAW 465
>gi|254368621|ref|ZP_04984637.1| hypothetical protein FTAG_01613 [Francisella tularensis subsp.
holarctica FSC022]
gi|157121524|gb|EDO65715.1| hypothetical protein FTAG_01613 [Francisella tularensis subsp.
holarctica FSC022]
Length = 671
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG----- 152
+ +F V ++ANI+AIP++SFV++P L+ +LL + ++ +M
Sbjct: 330 PISVYYFGGFSVVSILANIVAIPLVSFVIVPLLLLCLLLSFIGINLWLLPMMFLKLLVAY 389
Query: 153 LDIIIHIAHRISVAH 167
L + + A IS
Sbjct: 390 LSFLTNYAGFISYWS 404
>gi|254375280|ref|ZP_04990760.1| hypothetical protein FTDG_01474 [Francisella novicida GA99-3548]
gi|151572998|gb|EDN38652.1| hypothetical protein FTDG_01474 [Francisella novicida GA99-3548]
Length = 671
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG----- 152
+ +F V ++ANI+AIP++SFV++P L+ +LL + ++ +M
Sbjct: 330 PISVYYFGGFSVVSILANIVAIPLVSFVIVPLLLLCLLLSFIGINLWLLPMMFLKLLVAY 389
Query: 153 LDIIIHIAHRISVAH 167
L + + A IS
Sbjct: 390 LSFLTNYAGFISYWS 404
>gi|134302713|ref|YP_001122681.1| putative ComEC/Rec2-related protein [Francisella tularensis subsp.
tularensis WY96-3418]
gi|134050490|gb|ABO47561.1| Putative ComEC/Rec2-related protein [Francisella tularensis subsp.
tularensis WY96-3418]
Length = 671
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG----- 152
+ +F V ++ANI+AIP++SFV++P L+ +LL + ++ +M
Sbjct: 330 PISVYYFGGFSVVSILANIVAIPLVSFVIVPLLLLCLLLSFIGINLWLLPMMFLKLLVAY 389
Query: 153 LDIIIHIAHRISVAH 167
L + + A IS
Sbjct: 390 LSFLTNYAGFISYWS 404
>gi|89257164|ref|YP_514526.1| competence-related protein [Francisella tularensis subsp.
holarctica LVS]
gi|156503390|ref|YP_001429455.1| ComEC/Rec2-related competence protein [Francisella tularensis
subsp. holarctica FTNF002-00]
gi|290953362|ref|ZP_06557983.1| competence protein [Francisella tularensis subsp. holarctica URFT1]
gi|295313409|ref|ZP_06804016.1| competence protein [Francisella tularensis subsp. holarctica URFT1]
gi|89144995|emb|CAJ80355.1| Competence-related protein [Francisella tularensis subsp.
holarctica LVS]
gi|156253993|gb|ABU62499.1| ComEC/Rec2-related competence protein [Francisella tularensis
subsp. holarctica FTNF002-00]
Length = 671
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG----- 152
+ +F V ++ANI+AIP++SFV++P L+ +LL + ++ +M
Sbjct: 330 PISVYYFGGFSVVSILANIVAIPLVSFVIVPLLLLCLLLSFIGINLWLLPMMFLKLLVAY 389
Query: 153 LDIIIHIAHRISVAH 167
L + + A IS
Sbjct: 390 LSFLTNYAGFISYWS 404
>gi|328676228|gb|AEB27098.1| competence protein [Francisella cf. novicida Fx1]
Length = 671
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG----- 152
+ +F V ++ANI+AIP++SFV++P L+ +LL + ++ +M
Sbjct: 330 PISVYYFGGFSVVSILANIVAIPLVSFVIVPLLLLCLLLSFIGINLWLLPMMFLKLLVAY 389
Query: 153 LDIIIHIAHRISVAH 167
L + + A IS
Sbjct: 390 LSFLTNYAGFISYWS 404
>gi|57340130|gb|AAW50052.1| hypothetical protein FTT0179 [synthetic construct]
Length = 457
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG----- 152
+ +F V ++ANI+AIP++SFV++P L+ +LL + ++ +M
Sbjct: 107 PISVYYFGGFSVVSILANIVAIPLVSFVIVPLLLLCLLLSFIGINLWLLPMMFLKLLVAY 166
Query: 153 LDIIIHIAHRISVAH 167
L + + A IS
Sbjct: 167 LSFLTNYAGFISYWS 181
>gi|208779960|ref|ZP_03247303.1| competence protein [Francisella novicida FTG]
gi|208743964|gb|EDZ90265.1| competence protein [Francisella novicida FTG]
Length = 671
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG----- 152
+ +F V ++ANI+AIP++SFV++P L+ +LL + ++ +M
Sbjct: 330 PISVYYFGGFSVVSILANIVAIPLVSFVIVPLLLLCLLLSFIGINLWLLPMMFLKLLVAY 389
Query: 153 LDIIIHIAHRISVAH 167
L + + A IS
Sbjct: 390 LSFLTNYAGFISYWS 404
>gi|118496769|ref|YP_897819.1| competence protein [Francisella tularensis subsp. novicida U112]
gi|194324077|ref|ZP_03057852.1| competence protein [Francisella tularensis subsp. novicida FTE]
gi|118422675|gb|ABK89065.1| competence protein [Francisella novicida U112]
gi|194321974|gb|EDX19457.1| competence protein [Francisella tularensis subsp. novicida FTE]
Length = 671
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG----- 152
+ +F V ++ANI+AIP++SFV++P L+ +LL + ++ +M
Sbjct: 330 PISVYYFGGFSVVSILANIVAIPLVSFVIVPLLLLCLLLSFIGINLWLLPMMFLKLLVAY 389
Query: 153 LDIIIHIAHRISVAH 167
L + + A IS
Sbjct: 390 LSFLTNYAGFISYWS 404
>gi|332637227|ref|ZP_08416090.1| metallo-beta-lactamase superfamily hydrolase [Weissella cibaria
KACC 11862]
Length = 754
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 51/136 (37%), Gaps = 8/136 (5%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG-VMAWGLDII 156
L+ H + ++AN++A+P+ +++VIP L+ I +M+ +I
Sbjct: 364 PVLLWHTYAWHPISILANLVAMPVFTWLVIPVLLVGI-----GAAWCGLTPIMSCCNALI 418
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV--FCKTNIRHIGSIMIGITIIILFT 214
I I+ + + V + V + R IG +++ I ++
Sbjct: 419 NGIQFGIAQMDRVPGELVFGQPPLLLSGVALVGTVSWLLRRRRRTIGLVLLVIYGVMFLL 478
Query: 215 FPYSFSPDLLISEKGN 230
+ + ++ G
Sbjct: 479 PRLATGGFVAFADVGQ 494
>gi|184155086|ref|YP_001843426.1| competence protein [Lactobacillus fermentum IFO 3956]
gi|183226430|dbj|BAG26946.1| competence protein [Lactobacillus fermentum IFO 3956]
Length = 745
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 67/201 (33%), Gaps = 14/201 (6%)
Query: 100 LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIII 157
+ FH + L+ N L IP S +++P + +L L L + + +
Sbjct: 363 SVYQFH---LLSLVINYLMIPFFSLIIMPLAIGGGILYPLFPGLGAVVNAGLILFHRGLA 419
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+A+ G++P V + + L MV + ++ + + FP
Sbjct: 420 ALAN----LPGTITFGKVPAW--VAVSLVLLTMVTWEKRGAVKWLVLGYVVTFVWLHFPL 473
Query: 218 SFSPDLLISEKGNLVALVDK---NTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDL 274
+ +G+ + + + ++ + +F WK + +A L
Sbjct: 474 QGEVTFVDIGQGDCIIIREPFNRRVMMIDTGGKLNFQTEGWKKRTNSATDKATSTSLNYL 533
Query: 275 QEKNQSSLKEILRSMQPRKFL 295
+ + L + S +
Sbjct: 534 KSEGIDHLDAVWLSHSDADHI 554
>gi|254372134|ref|ZP_04987627.1| hypothetical protein FTCG_01276 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151569865|gb|EDN35519.1| hypothetical protein FTCG_01276 [Francisella novicida GA99-3549]
Length = 671
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG----- 152
+ +F V ++ANI+AIP++SFV++P L+ +LL + ++ +M
Sbjct: 330 PISVYYFGGFSVVSILANIVAIPLVSFVIVPLLLLCLLLSFIGINLWLLPMMFLKLLVAY 389
Query: 153 LDIIIHIAHRISVAH 167
L + + A IS
Sbjct: 390 LSFLTNYAGFISYWS 404
>gi|239637601|ref|ZP_04678573.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus warneri L37603]
gi|239596819|gb|EEQ79344.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus warneri L37603]
Length = 696
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 83 EIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
++ + A + I HF+ I GLI+N++ +P SF++ P ++ +L
Sbjct: 294 KLIVAVTFIAQLGALLISIYHFNQIQWIGLISNLVFVPFYSFLIFPLSILFFVLSHF 350
>gi|71899425|ref|ZP_00681584.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Xylella fastidiosa Ann-1]
gi|71730834|gb|EAO32906.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Xylella fastidiosa Ann-1]
Length = 825
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 40/112 (35%), Gaps = 3/112 (2%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNI 144
+ + F + F + G +AN++AIP+ +FVV+P L+ L L +
Sbjct: 410 SAQGVATLGLLPFTVALFGQVSFVGPLANLIAIPLWTFVVVPLVLLGTALEALVPGWGSP 469
Query: 145 PFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + + ++ + + + ++ ++ +
Sbjct: 470 MWRLGGNCFQWSWQLFEYLAQTDFALWWLPESDGVALGLALLGAFWLLLPRG 521
Score = 42.5 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 62/187 (33%), Gaps = 9/187 (4%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSI--PKMIYSSESHNTWTW 70
A + + RL P PG FD + +GI A GY + + + ++ N W
Sbjct: 173 AGSVWQLHVRLRAPHSLLNPGGFDSERYALAQGIVATGYVRTPTMARELAAATGINAWRE 232
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ + I + L E + + + + GL +++AI
Sbjct: 233 RMSARIADAVLLEASVYLRALALGDTRGLSQQDWEVLRATGL-THLIAISGFHV----GM 287
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
+ +++SL F +AW +A + + S T+ ++
Sbjct: 288 VAGACALLVSLLWRVFPHLAW--RWPRPLAMALIAVPAAAGYTVLAGASLPTVRTALMIG 345
Query: 191 VFCKTNI 197
+ +
Sbjct: 346 IVALARL 352
>gi|303228978|ref|ZP_07315788.1| ComEC/Rec2-like protein [Veillonella atypica ACS-134-V-Col7a]
gi|302516392|gb|EFL58324.1| ComEC/Rec2-like protein [Veillonella atypica ACS-134-V-Col7a]
Length = 730
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 73/196 (37%), Gaps = 31/196 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + Y + + +P W +K + I A +
Sbjct: 402 SFQLSFGATYGLL-----LFGMPLY--------RWITVLPPIVKAPLVLCISAQLLLI-- 446
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSF-VVIPAG-LIAILLMILSLDNIPFGVMAW 151
F + +FH + + L A I+ P+L +V+ G I L + + + + V+ W
Sbjct: 447 ----PFQLYYFHYLSLASLFAAIIITPLLDIAIVMLFGCTIISLFIPIGM---VWNVIDW 499
Query: 152 GLDIIIHI-AHRISVAHNEFCIGRIPETSFVTI--VVEFLLMVFCKTNIRH----IGSIM 204
L I +++ AH + + + IG I T V V L + ++ G ++
Sbjct: 500 ILTICLYVNAHLANSSICLWWIGTISATLGVLYYGCVGLLYINLVSLKLKFRTFTKGIVL 559
Query: 205 IGITIIILFTFPYSFS 220
+GI II + +
Sbjct: 560 MGIGIIAIAYSGILYR 575
>gi|227514788|ref|ZP_03944837.1| competence protein EC [Lactobacillus fermentum ATCC 14931]
gi|227086836|gb|EEI22148.1| competence protein EC [Lactobacillus fermentum ATCC 14931]
Length = 745
Score = 47.5 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 67/201 (33%), Gaps = 14/201 (6%)
Query: 100 LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIII 157
+ FH + L+ N L IP S +++P + +L L L + + +
Sbjct: 363 SVYQFH---LLSLVINYLMIPFFSLIIMPLAIGGGILYPLFPGLGAVVNAGLILFHRGLA 419
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+A+ G++P V + + L MV + ++ + + FP
Sbjct: 420 ALAN----LPGTITFGKVPAW--VAVSLVLLTMVTWEKRGAVKWLVLGYVVTFVWLHFPL 473
Query: 218 SFSPDLLISEKGNLVALVDK---NTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDL 274
+ +G+ + + + ++ + +F WK + +A L
Sbjct: 474 QGEVTFVDIGQGDCIIIREPFNRRVMMIDTGGKLNFQTEGWKKRTNSATDKATSTSLNYL 533
Query: 275 QEKNQSSLKEILRSMQPRKFL 295
+ + L + S +
Sbjct: 534 KSEGIDHLDAVWLSHSDADHI 554
>gi|222151485|ref|YP_002560641.1| hypothetical protein MCCL_1238 [Macrococcus caseolyticus JCSC5402]
gi|222120610|dbj|BAH17945.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 743
Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL-LMILSL 141
+A L HF+ + GL+ N+L IP+ SF++ P +L LM+ +
Sbjct: 357 VAALPILFYHFNIVYFIGLLTNLLFIPLFSFIIFPLCTFILLCLMLFNF 405
>gi|300775956|ref|ZP_07085815.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
gi|300505089|gb|EFK36228.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
Length = 592
Score = 47.1 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 24/159 (15%), Positives = 63/159 (39%), Gaps = 12/159 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + ++ +G F+ + + ++ S IK+ N I ++
Sbjct: 336 LFDVGFQLSF--LAVLGIFWLNQPL-------LKYFPRQDSYIKKILFNTITVSLS--AQ 384
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ ++ +FH + +IAN + +P +++ + L+ L+ + + + + +
Sbjct: 385 LATLPVVLYYFHQFSLISIIANFVIVPFSEIIIVFSFLMTALISASADFELINRLYDFVI 444
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
I++ + H + IP + V ++ +
Sbjct: 445 QILLKMIHWFAEVD-VLFFENIPMNGIEVLSVSVVIFLL 482
>gi|314981252|gb|EFT25346.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL110PA3]
gi|315091821|gb|EFT63797.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL110PA4]
Length = 762
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 26/203 (12%), Positives = 60/203 (29%), Gaps = 19/203 (9%)
Query: 49 IGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP 108
+G++ S W+ ++ + + + + +
Sbjct: 329 VGFWLSACATAGILWWAQPWS---VAMEWAPAWLAVGVTVPWAAQVTTQPVITWMAGIVS 385
Query: 109 VYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-----GVMAWGLDIIIHIAHRI 163
GL+AN+ A P V PA + ++ +L+ P + W + II IAH
Sbjct: 386 TTGLVANLAAAP----FVPPASALGMVTGLLAFIWPPLGTPFGRLAGWCVQPIIWIAHFG 441
Query: 164 SVAHNEFCIGRIPETSFVTIV-----VEFLLMVFCKTNI--RHIGSIMIGITIIILFTFP 216
+ A + + + + + G +I ++
Sbjct: 442 AKAPSGLIRWPAGGWALGVLAGLCVGLALITPTVLARPWLTALAGLAVIAAMVVRPPLPG 501
Query: 217 YSFSPDLLISEKGNLVALVDKNT 239
+ + I + G A + +
Sbjct: 502 WPGQWQVAICDVGQGSAALVRAG 524
>gi|210609807|ref|ZP_03288114.1| hypothetical protein CLONEX_00298 [Clostridium nexile DSM 1787]
gi|210152734|gb|EEA83740.1| hypothetical protein CLONEX_00298 [Clostridium nexile DSM 1787]
Length = 744
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 39/101 (38%), Gaps = 7/101 (6%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDI 155
L+ + P+Y L+ NI IP++S V+ GLI L + + + + V L++
Sbjct: 351 PVLLYFYFEFPLYSLLLNIAVIPMMS-WVLGLGLIGSLFLPICQPIGMVLVKVCGIFLEL 409
Query: 156 IIHIAHRISVAHNEFCIGRIPETS----FVTIVVEFLLMVF 192
++ + P + V +++V
Sbjct: 410 FEWMSRFAGRLPGARMVFGQPAWWQISAYYLFVFGSVILVL 450
>gi|260893332|ref|YP_003239429.1| DNA internalization-related competence protein ComEC/Rec2
[Ammonifex degensii KC4]
gi|260865473|gb|ACX52579.1| DNA internalization-related competence protein ComEC/Rec2
[Ammonifex degensii KC4]
Length = 791
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 23/173 (13%), Positives = 66/173 (38%), Gaps = 16/173 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ + G F+ P++ ++W K++++ + + +
Sbjct: 342 GFQLSFAATW------GIFFVGPEVNR--WWQDSWGKTKLTAL-IPYGWFL--AVPLGAE 390
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL--LMILSLDNIPFGVMAW 151
+ H+ + L+AN+L P+++ + L+A+L L+ + F V +
Sbjct: 391 LGVLPLVAWHYGLVSPVSLLANLLTAPLITVIFAGGFLVALLGALLPFLGQALAFLVSPF 450
Query: 152 GLDIIIHIAH-RISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
+ + + + H + + + +P + + + + R +G
Sbjct: 451 -IHLFLFLVHLCQQLPYAAVYLSTVPLLAVIFWYPA-VWLAVRGGKWRRVGIA 501
>gi|330686114|gb|EGG97735.1| DNA internalization competence protein ComEC/Rec2-like protein
[Staphylococcus epidermidis VCU121]
Length = 728
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 83 EIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
++ + A + I HF+ I GLI+N++ +P SF + P ++ +L
Sbjct: 326 KLIIEVTFIAQLGALLISIYHFNQIQWIGLISNLVFVPFYSFFIFPLAILFYILSHF 382
>gi|73662479|ref|YP_301260.1| hypothetical protein SSP1170 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494994|dbj|BAE18315.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 693
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 32/67 (47%)
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI 132
+ +K + + + + S+SI HF+ I G++AN+ +P +F++ PA LI
Sbjct: 281 LPILKDANIVKSMIFVSVIAQLSSSIISAAHFNQIQWIGILANLFFVPFYTFILFPASLI 340
Query: 133 AILLMIL 139
+
Sbjct: 341 YFASLHF 347
>gi|297544364|ref|YP_003676666.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296842139|gb|ADH60655.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 757
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 60/160 (37%), Gaps = 16/160 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F + AI YFY + S + I+ A IGT
Sbjct: 321 LWDVGFQLSFVATLAILYFYKPIQKKLSMLN---------PKIRDLIAITFSAQIGTI-- 369
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG- 152
+ +FH I + ++NI+ +P+ V+ L AI+ +IL + +
Sbjct: 370 ----PLTMYYFHYISIISFLSNIVIVPLADVAVVLGFLSAIIGLILPFLSYFINYINIPF 425
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
++ I++I + ++ IP + + L + F
Sbjct: 426 VEAILYITNLLNSFPYASINTIIPPLYVIVLYYGILAVTF 465
>gi|289578091|ref|YP_003476718.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter italicus Ab9]
gi|289527804|gb|ADD02156.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter italicus Ab9]
Length = 757
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 60/160 (37%), Gaps = 16/160 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F + AI YFY + S + I+ A IGT
Sbjct: 321 LWDVGFQLSFVATLAILYFYKPIQKKLSMLN---------PKIRDLIAITFSAQIGTI-- 369
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG- 152
+ +FH I + ++NI+ +P+ V+ L AI+ +IL + +
Sbjct: 370 ----PLTMYYFHYISIISFLSNIVIVPLADVAVVLGFLSAIIGLILPFLSYFINYINIPF 425
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
++ I++I + ++ IP + + L + F
Sbjct: 426 VEAILYITNLLNSFPYASINTIIPPLYVIVLYYGILAVTF 465
>gi|307544569|ref|YP_003897048.1| ComEC-type competence protein [Halomonas elongata DSM 2581]
gi|307216593|emb|CBV41863.1| ComEC-type competence protein [Halomonas elongata DSM 2581]
Length = 779
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 55/150 (36%), Gaps = 7/150 (4%)
Query: 68 WTWKKIS-SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
W + ++ L +R + ++ L F + + N++A+P++S ++
Sbjct: 351 WQGRSRPRGVRGWCLALVRTQWLLAPLMATAVLLA--FGRLAPAAPLVNLVAVPLVSALM 408
Query: 127 IPAGLIAILLM---ILSLDNIPFGV-MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P GL LL LS+ + GL ++ A + R P +
Sbjct: 409 VPLGLAGWLLAWVPPLSMACWTLFAGLTQGLATVLEAAVALLPLWQPLPEQRWPLVIGLG 468
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+V + R G++++ + L
Sbjct: 469 LVSALWALPGLDRRWRVAGTLLLAAGSVWL 498
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 34/216 (15%), Positives = 73/216 (33%), Gaps = 3/216 (1%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
ARL PP+G A PG FD+ + +GI A GY P +E+ +
Sbjct: 128 IQVGERWRLTARLRPPAGAANPGTFDYRGWLWREGIQATGYLRQTPAPHRLAEAGVSVRR 187
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
++ + + L + + A L + +++ I L ++ A
Sbjct: 188 LALAHLDEQGLAPRPSRWLAALTLGAERRLEAQDWELLNASGTTHLVVISGLHIGLVAAF 247
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
+ + ++ MA A ++ + P + + + L +
Sbjct: 248 ALGVARLLARCLMPGRWRMAI---WPWWFAGMVAAGYALLAGLEAPAMRALVMALVGLWV 304
Query: 191 VFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
+ + + + +I+L ++ P L +S
Sbjct: 305 ASGRHAPGAWQAWWLALALILLLDPLSAWRPGLWLS 340
>gi|110639347|ref|YP_679556.1| competence protein [Cytophaga hutchinsonii ATCC 33406]
gi|110282028|gb|ABG60214.1| competence protein [Cytophaga hutchinsonii ATCC 33406]
Length = 626
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN-I 144
+I + ++ HF P+Y + AN+L IPI + + A + +I L+ L +
Sbjct: 371 VSITICAQITTLPVILYHFQSFPLYFIPANMLLIPISTVALF-ASMFSIFLVGLGIHANW 429
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF 187
F W +++ +A IS +P +S I F
Sbjct: 430 IFRSTQWLIELFQQVAASIS---------MLPNSSVAPISFSF 463
>gi|325981945|ref|YP_004294347.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosomonas sp. AL212]
gi|325531464|gb|ADZ26185.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosomonas sp. AL212]
Length = 786
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 65/162 (40%), Gaps = 23/162 (14%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAIL-----LMILSLDNIPFGVMAWGLDIIIH 158
F + + +AN +AIP++S +V+P L+A + ++ L D V+ L + +
Sbjct: 404 FQQVSLISPVANAIAIPLISLIVVPLTLLATIPVFDFMLPLIHD--VLSVLMVILQSLSN 461
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT---------NIRHIGSIMIGITI 209
++H + H+ P + V+ L M+ + R +G I +
Sbjct: 462 LSHTVWQQHSP------PVWTIGVAVIGILWMLLPGSLGVGFFSGFPARWLGVIAVLPVF 515
Query: 210 IILFTFPYSFSPDLLISEKGNLVALVDK-NTLISNYSNPPSF 250
++ P + L + + G +A+V + + P F
Sbjct: 516 LVKPPQPKTGELWLTVLDVGQGLAVVARTEHHALLFDTGPGF 557
>gi|322420565|ref|YP_004199788.1| DNA internalization-like competence protein ComEC/Rec2 [Geobacter
sp. M18]
gi|320126952|gb|ADW14512.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacter sp. M18]
Length = 786
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 70/191 (36%), Gaps = 15/191 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD +F + I G P + S + + + S +
Sbjct: 341 LFDVSFQLSFLAI--WGLAVLPPTLSAPSSTKGKALRWPLLLMVASAAAIL--------- 389
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + + HF + + GL+AN+L +P++ + + +G + ++L + + ++
Sbjct: 390 -ATLVHVAYHFQRVSLVGLVANLLVVPLMGYGAVVSGFVGLVLACV-WEVPAAALLHLAA 447
Query: 154 DIIIHIAHRISVAH-NEFCIGRIPE-TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
++ + G P+ + + + C ++ +++ ++ ++
Sbjct: 448 LLVHWSDQVVEHLSRAPVLEGYAPDRLDLLIACLVLCAVTLCSCKVQRFAAVVPLLSALV 507
Query: 212 LFTFPYSFSPD 222
L P + + D
Sbjct: 508 LRAVPGATAAD 518
>gi|329121283|ref|ZP_08249910.1| competence protein EC [Dialister micraerophilus DSM 19965]
gi|327470217|gb|EGF15680.1| competence protein EC [Dialister micraerophilus DSM 19965]
Length = 727
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 6/109 (5%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI---PAGLIAILLMILSLD 142
A + ++ +FH P+Y + +NI P+L FV+I A + +L L
Sbjct: 383 AALSISAQLLIVPIILYNFHNFPIYFIFSNIFVTPLLDFVIIFGLTAAIFVWILPP--LS 440
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNEFCI-GRIPETSFVTIVVEFLLM 190
+ + L+ + I H I+ + G + + +T L +
Sbjct: 441 GGILYITDYILEFSLTINHFIANLPKARYLTGGMNLSEVLTYYGAILFV 489
>gi|242239637|ref|YP_002987818.1| hypothetical protein Dd703_2209 [Dickeya dadantii Ech703]
gi|242131694|gb|ACS85996.1| DNA internalization-related competence protein ComEC/Rec2 [Dickeya
dadantii Ech703]
Length = 747
Score = 47.1 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 30/229 (13%), Positives = 77/229 (33%), Gaps = 15/229 (6%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA-NIGTYGSASASIFLIKHFHCIPVY 110
F+ + + W + +RA ++ + + F I +
Sbjct: 324 FWLSALAVAALIFWYQWAPLSAGRWRGVCGWWVRALHLQIGITLLLVPLQVLLFQGISLS 383
Query: 111 GLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
L AN+ A+P++S + P L+ + LM+ S L + + + L ++ + +
Sbjct: 384 SLPANLWAVPLVSLITTPLVLVTLPLMVFSPLAHALWWLADRSLALVFAL-----LQALP 438
Query: 170 FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDL---LIS 226
P + + +L ++ + + + ++ L P + SP ++
Sbjct: 439 DGWLPAPASLLPFSALGWLAVISWRLGWWRSQTAGLLALMLWLALRPRTPSPQWRVDMLD 498
Query: 227 EKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQ 275
L ++++ Y W+ P+++ L+
Sbjct: 499 VGHGLAVVIERQGKAVLYDTGAR-----WEGGDSMTRDILPYLRWRGLR 542
>gi|330811014|ref|YP_004355476.1| Competence protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379122|gb|AEA70472.1| Competence protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 748
Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 66/171 (38%), Gaps = 3/171 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHIAHRISV 165
+ + G + N+LA+P +S +V+P L+ L+ + L + LD++ ++
Sbjct: 376 VSLSGPLVNLLAVPWISLLVLPLALLGTALLPVPLMGEGLLWIAGGLLDLLFKGLALVAG 435
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
+ +P + L++ K +R +G M+ + + ++
Sbjct: 436 RMPAWVPAAVPPWALGIAAFGAFLLLLPKGVPLRVLGWPMVLLMVFPPQEHLPQGHAEIW 495
Query: 225 ISEKGNLVALVDKNTL-ISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDL 274
+ G +A++ + Y P F + ++ P V++ DL
Sbjct: 496 QLDVGQGLAVLVRTRRHALLYDAGPRFGEADAGERVVLPTLRKLGVRRLDL 546
Score = 39.8 bits (91), Expect = 0.70, Method: Composition-based stats.
Identities = 33/254 (12%), Positives = 80/254 (31%), Gaps = 10/254 (3%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P + +L PSG P FD+ +GI A G + + +
Sbjct: 120 PVNSGERWRLAVKLKRPSGLLNPHGFDYAAWLLSRGIGATGTIKDGHLLQAARGAWRDEV 179
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+ ++ + + A + + + + G + ++L I ++ A
Sbjct: 180 RQALAQVDAHGRSGALAALVLGDG---GGLSREDWQVLQDTGTV-HLLVISGQHIGLL-A 234
Query: 130 GLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPE-TSFVTIVVEF 187
GL+ +L+ + L +A ++ + +P + I +
Sbjct: 235 GLVYLLVA--GAARYGLWPVGLAWLPWACGLAFCAALGYGLLAGFEVPVRRACAMIGLVL 292
Query: 188 LLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNP 247
L + K ++ + +++ S P +S + + + +
Sbjct: 293 LWRLRFKQPDPWWAWLLAFVGVLVFDPLA-SLRPGFWLSFAAVAILMFTFGARLGPWRWW 351
Query: 248 PSFIFSQWKSALIT 261
++ +QW AL
Sbjct: 352 QTWTRAQWLVALGL 365
>gi|310767181|gb|ADP12131.1| Putative competence-like protein [Erwinia sp. Ejp617]
Length = 754
Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 27/179 (15%), Positives = 57/179 (31%), Gaps = 19/179 (10%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
FH I + L+AN+ A+P++S V +P L+A++ L + +D + + +
Sbjct: 383 FHGISLSALVANLWAVPLISLVTVPLILLALMCNALPWISPLLW---QCVDRSLAL---V 436
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF---- 219
+ G P ++ + + M I L +
Sbjct: 437 FMPLQSLPRGWFPLDHALSAASLLCWLALICLRFGWWRTSMASIASTALLICSWRSLFPA 496
Query: 220 ---SPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQ 275
D+L G L ++ + + Y W P + + ++
Sbjct: 497 AEWRVDMLDVGHG-LAVVISRQGEATLYDTGHR-----WPGGDAAQSQILPWLAWQGIR 549
>gi|301155975|emb|CBW15445.1| conserved inner membrane protein [Haemophilus parainfluenzae T3T1]
Length = 790
Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 8/137 (5%)
Query: 59 IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILA 118
Y S W +K+S + L +G + + F+ + + G +AN++A
Sbjct: 344 RYVPLSIIEWQHQKLSGKVRWILGLFHLQLGLLILFT--PIQLFFFNGLALNGFLANLIA 401
Query: 119 IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
+P+ SFV++P L A+L +A G I +S + I +
Sbjct: 402 VPLYSFVLVPLILFAMLTNGAFSSWHFSNAIAQG------ITQCLSFFQGSYMPISINLS 455
Query: 179 SFVTIVVEFLLMVFCKT 195
+T ++ F+ V
Sbjct: 456 LILTALLSFVFGVMLGG 472
>gi|270159268|ref|ZP_06187924.1| DNA internalization-related competence protein ComEC/Rec2
[Legionella longbeachae D-4968]
gi|289165908|ref|YP_003456046.1| DNA uptake/competence proteins [Legionella longbeachae NSW150]
gi|269987607|gb|EEZ93862.1| DNA internalization-related competence protein ComEC/Rec2
[Legionella longbeachae D-4968]
gi|288859081|emb|CBJ13010.1| putative DNA uptake/competence proteins [Legionella longbeachae
NSW150]
Length = 740
Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 63/158 (39%), Gaps = 7/158 (4%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII- 156
+ + + G IAN+ AIP++ +++P L+ + + LS+ I ++ + ++
Sbjct: 367 PLTLYWYAYGSINGFIANLFAIPLVGLLIVPLSLMTMTVSSLSIAKILMKAVSLLITLLF 426
Query: 157 --IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITII--IL 212
+ ++ ++ + I I E + V I + ++ + I + + +
Sbjct: 427 KGLSLSEYLAALNINCPIYSI-ELALVLIGALLMWVLLPTKPFQWIAMLWLLLPFFPPRT 485
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
D+L +G VA+ ++ + Y F
Sbjct: 486 IIQAGEAKIDVLDVGQGLAVAIRTQH-HVLLYDTGDRF 522
>gi|313813081|gb|EFS50795.1| putative DNA internalization-related competence protein ComEC/Rec2
[Propionibacterium acnes HL025PA1]
Length = 762
Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 26/204 (12%), Positives = 63/204 (30%), Gaps = 15/204 (7%)
Query: 46 ISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFH 105
+ ++G + S+ W+ ++ + + + +
Sbjct: 326 VGSVGLWLSVCATAGILWWAQPWS---VAMEWAPAWLAVGVTVPWAARVTTQPVITWMAG 382
Query: 106 CIPVYGLIANILAIPIL---SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
+ GL+AN+ A P + S + + GL+A + + L + W + II IAH
Sbjct: 383 TVSTTGLVANLAAAPFVPPASTLGMVTGLLAFIWLPLG--TPFGRLAGWCVQPIIWIAHF 440
Query: 163 ISVAHNEFCIGRIPETSFVTIV-----VEFLLMVFCKTNI--RHIGSIMIGITIIILFTF 215
+ A + + + + + G +I ++
Sbjct: 441 GAKAPSGLIRWPAGGWALGVLAGLCMGLALITPTVLAKPWLTALAGLAVIAAMVVRPPLP 500
Query: 216 PYSFSPDLLISEKGNLVALVDKNT 239
+ + I + G A + +
Sbjct: 501 GWPGQWQVAICDVGQGSAALVRAG 524
>gi|88705097|ref|ZP_01102809.1| DNA internalization-related competence protein ComEC/Rec2
[Congregibacter litoralis KT71]
gi|88700792|gb|EAQ97899.1| DNA internalization-related competence protein ComEC/Rec2
[Congregibacter litoralis KT71]
Length = 776
Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 55/152 (36%), Gaps = 7/152 (4%)
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
Y + + F G + N++A+P+ +F+V+P L A++L L + +
Sbjct: 382 QGYMLLAMLPLGLFWFQEAGSIGAVVNLVAVPLTTFLVVPLLLCAVVLAPL-WYALADHL 440
Query: 149 MAWG--LDIIIHIAHRISVAH-NEFCIGRIPET--SFVTIVVEFLLMVFCKTNIRHIGSI 203
+ W + + A + + R+ + +++ + R
Sbjct: 441 LEWAAIVLATLWSALEYWEPMLGPWGVLRVSPGNVQLFLALFGVVILALPRFPGRIFSVG 500
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
++ + + I +LL + G A++
Sbjct: 501 LLLVPLSIP-DSRGDDFVELLFFDVGQGTAVL 531
>gi|196248982|ref|ZP_03147682.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. G11MC16]
gi|196211858|gb|EDY06617.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. G11MC16]
Length = 748
Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 48/121 (39%), Gaps = 6/121 (4%)
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
HF+ I ++ + N+L +P+ SFV++P + + + + +++ ++
Sbjct: 369 YHFYEISIWSVGLNVLFVPLYSFVILPLA-FVVAALPF---PPLVWLFSCLIELTNNVVR 424
Query: 162 RISVAHNEFCIGRIPETSFV--TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
SV H + PE + + + ++ + G + + +++ PY
Sbjct: 425 FFSVDHPLTIVLGRPEPWCLAVYVAAIVVALLLWERGQLFRGLAAVAMAMVLQLVSPYVD 484
Query: 220 S 220
Sbjct: 485 P 485
>gi|290890475|ref|ZP_06553550.1| hypothetical protein AWRIB429_0940 [Oenococcus oeni AWRIB429]
gi|290479871|gb|EFD88520.1| hypothetical protein AWRIB429_0940 [Oenococcus oeni AWRIB429]
Length = 676
Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 51/137 (37%), Gaps = 12/137 (8%)
Query: 79 SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI 138
F + + T S F HF + AN +IPI V++P +A++L
Sbjct: 272 PFKQGLLMSSVTIPIILNSKFT-WHF-----LSMPANFFSIPIFGIVIMPLIGLAVVLHP 325
Query: 139 LSLDNIPF--GVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN 196
+ F ++A D+I IS + G++ + + +V LL +
Sbjct: 326 FWTQAVCFINYLVALFADLI----EMISKIPGKIVFGKMEDYLVIPLVCLILLSFDQRKK 381
Query: 197 IRHIGSIMIGITIIILF 213
IR+ + I F
Sbjct: 382 IRNFSLMAIATAFTASF 398
>gi|254247797|ref|ZP_04941118.1| ComEC/Rec2-related protein [Burkholderia cenocepacia PC184]
gi|124872573|gb|EAY64289.1| ComEC/Rec2-related protein [Burkholderia cenocepacia PC184]
Length = 576
Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 29/219 (13%), Positives = 73/219 (33%), Gaps = 9/219 (4%)
Query: 30 AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIG 89
F +F + + A+ + ++ ++ E+ + S + + R +
Sbjct: 115 VLSAGFWLSFGAVAVILLAVAGWRAVREVDDIDEAGAEGGTTGLRSRLRGWGTRCRRRLA 174
Query: 90 TY------GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
+ + F + + G N AIP +S VV P ++A + + LD
Sbjct: 175 EATRVQYAVTIGLAPLTAAWFAQVSLSGPFGNAFAIPWVSSVVTPV-VLAGIALPPPLDA 233
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV-VEFLLMVFCKTN-IRHIG 201
F + L+ ++ + ++ R+P+ + + V + + +R
Sbjct: 234 AAFRLAHAALEPMMTLLGYLADWPAGVFWLRMPDWPVLALACVGVAWALMPRGWPLRWAA 293
Query: 202 SIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ + P L + + G A++ +
Sbjct: 294 PLTWLPLVAPAPDAPPPGGFRLTVLDVGQGAAVLVETAR 332
>gi|328554293|gb|AEB24785.1| hypothetical protein BAMTA208_13120 [Bacillus amyloliquefaciens
TA208]
Length = 783
Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 51/146 (34%), Gaps = 14/146 (9%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
A S+ FL+ HF I + N++ +P + VIP +I LL++LS
Sbjct: 356 LAMASFIAELSSLPFLLYHFQQISLVSFPMNMVMVPFYTLFVIPFSVIGFLLLLLSRQAG 415
Query: 145 -PFGVMAWGLDIIIHIAH----RISVAHNEFCIGRIPET-SFVTIVVEF--LLMVFCKT- 195
+ D+++ H + I P+ S + + V L K
Sbjct: 416 EFLFYLF---DLVMKPVHDFITYAASVDLFTMIASKPDFLSLLMLAVSVFTLFAALEKGG 472
Query: 196 --NIRHIGSIMIGITIIILFTFPYSF 219
+R + I+F +S
Sbjct: 473 FLKLRKSALFFFAVLAYIMFRPYFSP 498
>gi|262373139|ref|ZP_06066418.1| competence factor [Acinetobacter junii SH205]
gi|262313164|gb|EEY94249.1| competence factor [Acinetobacter junii SH205]
Length = 804
Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 54/137 (39%), Gaps = 8/137 (5%)
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
F +I + +I F I ++N++AIPILS +V+P + A + ++
Sbjct: 402 FAIKILIESQWKIFIALMPLVIIFFQQIAWIAPLSNLIAIPILSMLVVPLDIFAACVWLI 461
Query: 140 --SLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-CIGRIPETSFVTIVVEFLLMVFCKT- 195
SL + F + L I+I + + + I IP S + + L++ K
Sbjct: 462 FPSLGLVLFTLNNMLLSILIGLLDVLMSLTPDLQGISYIPL-SLFALSIGILILFMPKGT 520
Query: 196 ---NIRHIGSIMIGITI 209
+ + + I
Sbjct: 521 IPKSWGLVCFLPILFGA 537
>gi|226330702|ref|ZP_03806220.1| hypothetical protein PROPEN_04622 [Proteus penneri ATCC 35198]
gi|225201497|gb|EEG83851.1| hypothetical protein PROPEN_04622 [Proteus penneri ATCC 35198]
Length = 536
Score = 46.7 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 61/174 (35%), Gaps = 15/174 (8%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + + AI ++Y + + W ++ ++ L +
Sbjct: 110 SFWLSFSAVFAIIFWYWMSPLKAKYNHQKRWFILRLIHLQFGLLIILL------------ 157
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
F F + I N+ A+PI+SF+ +P + +L S +D+ I
Sbjct: 158 PFQFYLFGGANFFSFIVNLWAVPIISFITVPLIMFGLLTSFSSFLQPIIW---HWVDLSI 214
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
+ A + + + ++++ + RH ++I + I++
Sbjct: 215 NFAFWCAPLFLPYWQYSGTVPFLLGFSGVGIIVMIKMSWWRHHFILLIAVGILL 268
>gi|323140376|ref|ZP_08075306.1| DNA internalization competence protein ComEC/Rec2-like protein
[Phascolarctobacterium sp. YIT 12067]
gi|322415132|gb|EFY05921.1| DNA internalization competence protein ComEC/Rec2-like protein
[Phascolarctobacterium sp. YIT 12067]
Length = 701
Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 58/174 (33%), Gaps = 28/174 (16%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + A G + +P + + + + E A +
Sbjct: 273 GFQLSFGA------AAGLLWLLPA-----------CQRLLPQALPAPIGE-AAAVSLAAQ 314
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + +F + L++NI+ +P+L A + A+L + + + + AW
Sbjct: 315 LAVLPLEVYYFQQFSLIALVSNIVLVPVLEIAAQLALVGALL--PVCGEYL-LQLAAWLT 371
Query: 154 DIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFL------LMVFCKTNIRHI 200
++ A + + ++ IG++P V + F R
Sbjct: 372 AQVLTQARFFADLPYSTVVIGKLPAYCLVLYYAALFVWADFPWLQFWSNRERRC 425
>gi|323490044|ref|ZP_08095265.1| ComE operon protein 3 [Planococcus donghaensis MPA1U2]
gi|323396340|gb|EGA89165.1| ComE operon protein 3 [Planococcus donghaensis MPA1U2]
Length = 744
Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 19/154 (12%), Positives = 60/154 (38%), Gaps = 12/154 (7%)
Query: 76 IKQSFLNEIRAN--IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
+ ++ + I+A I + L+ HF+ + + + N L +P+ + V++PA +
Sbjct: 327 MLRTIQSPIKAGFVITFISQVTLYPLLLFHFYELSLSAFVVNSLFVPLFTVVILPANFLL 386
Query: 134 ILLMILSLDN-----IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL 188
+ L + L + + +D+++ + ++ + + P +++ +
Sbjct: 387 LCLTAVFLPAANFVFYFYEPLRQQVDVLM---NGLASLPYQLWVPGKPGLGIFVLLMSSV 443
Query: 189 --LMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ R +++ + ++ PY
Sbjct: 444 YFFYCAVERKFRWRYLLILIVPALLFTLMPYMDP 477
>gi|307266449|ref|ZP_07547985.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter wiegelii Rt8.B1]
gi|306918557|gb|EFN48795.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 757
Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 32/227 (14%), Positives = 78/227 (34%), Gaps = 30/227 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F + AI YFY +K+S + + + +
Sbjct: 321 LWDVGFQLSFVATLAILYFYKP-------------IREKLSMLNPKIQDLVALTLSAQIG 367
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG----VM 149
F + ++H I + L++NI+ +P+ + V ++ L ++ L P +
Sbjct: 368 TI--PFTMYYYHYISIISLLSNIVIVPLANIAV----VLGFLSAMIGLIFPPLSYFINYI 421
Query: 150 AWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK--TNIRHIGSIMIG 206
++ I++I + +P + + L ++ + I +
Sbjct: 422 NIPVVEAILYITKLFNSFPYASINTIVPPLYVIVLYYGILTVLLSSFDKKTKKISIAIAL 481
Query: 207 ITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFS 253
+I +F + Y DL + + + ++ + +F+
Sbjct: 482 TFVIAIFFYNYLLPKDLEV----TFLDVGQGDSTFVRTPHGKTFLID 524
>gi|259908917|ref|YP_002649273.1| Putative competence-related protein [Erwinia pyrifoliae Ep1/96]
gi|224964539|emb|CAX56049.1| Putative competence-related protein [Erwinia pyrifoliae Ep1/96]
gi|283478913|emb|CAY74829.1| Recombination protein 2 [Erwinia pyrifoliae DSM 12163]
Length = 754
Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 27/179 (15%), Positives = 57/179 (31%), Gaps = 19/179 (10%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
FH I + L+AN+ A+P++S V +P L+A++ L + +D + + +
Sbjct: 383 FHGISLSALVANLWAVPLISLVTVPLILLALMCNALPWISPLLW---QCVDRSLAL---V 436
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF---- 219
+ G P ++ + + M I L +
Sbjct: 437 FMPLQSLPRGWFPLDHALSAASLLCWLALICLRFGWWRTSMASIASTALLICSWRSLFPA 496
Query: 220 ---SPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQ 275
D+L G L ++ + + Y W P + + ++
Sbjct: 497 AEWRVDMLDVGHG-LAVVISRQGEATLYDTGHR-----WPGGDAAQSQILPWLAWQGIR 549
>gi|251796205|ref|YP_003010936.1| DNA internalization-related competence protein ComEC/Rec2
[Paenibacillus sp. JDR-2]
gi|247543831|gb|ACT00850.1| DNA internalization-related competence protein ComEC/Rec2
[Paenibacillus sp. JDR-2]
Length = 863
Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 17/118 (14%), Positives = 42/118 (35%), Gaps = 8/118 (6%)
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
+ + ++ + A + + +F+ + + AN++ +P +SF+V+P
Sbjct: 374 VRRAMPDWRKGKALLDLLVVTVVAQAVSFPLTVFYFNQFHLLSIPANLILVPFISFIVMP 433
Query: 129 AGLIAILLMILSLDNIPFGVMAWGL-----DIIIHIAHRISVAHNEFCIGRIPETSFV 181
G +A++ L G M + D + + I P ++
Sbjct: 434 IGAVALI---FGLLWPLGGQMLAAVSVYANDWTFLLVSWLGEMDAVRTIWATPPLWWI 488
>gi|121604112|ref|YP_981441.1| DNA internalization-like competence protein ComEC/Rec2 [Polaromonas
naphthalenivorans CJ2]
gi|120593081|gb|ABM36520.1| DNA internalization-related competence protein ComEC/Rec2
[Polaromonas naphthalenivorans CJ2]
Length = 845
Score = 46.7 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 54/153 (35%), Gaps = 9/153 (5%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F+ + + GL+AN LAIP ++ +V P ++ + L + AW + ++ + +
Sbjct: 476 FNQVSLVGLLANALAIPWVTLLVTPLAMLGVFYAPL------WDAAAWAVGLLTGLLQGL 529
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRH--IGSIMIGITIIILFTFPYSFSP 221
+ V ++ + +G ++ ++
Sbjct: 530 ASWPLASVDVAAAPLWCAVAGVLGGGLLALRLPWHWRALGIPLLLPVLLWQPARVAPGQF 589
Query: 222 DLLISEKGNLVALV-DKNTLISNYSNPPSFIFS 253
+LL ++ G A++ T Y P F
Sbjct: 590 ELLAADIGQGNAVLVRTATHALLYDTGPRFSRE 622
Score = 38.2 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 35/87 (40%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L + +K P A + RL P G + P FD+ + +GI A GY + P
Sbjct: 177 LELQRKPQPLRAGERWQMTVRLKAPHGNSNPHGFDYELWLWEQGIQATGYVRASPHDAPP 236
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANI 88
+ ++ + +QS I A +
Sbjct: 237 ARLSSSPWRHAVEGARQSVREAIYARV 263
>gi|260663630|ref|ZP_05864519.1| DNA internalization competence protein ComEC/Rec2 [Lactobacillus
fermentum 28-3-CHN]
gi|260551856|gb|EEX24971.1| DNA internalization competence protein ComEC/Rec2 [Lactobacillus
fermentum 28-3-CHN]
Length = 745
Score = 46.3 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 68/201 (33%), Gaps = 14/201 (6%)
Query: 100 LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIII 157
+ FH + L+ N L IP S +++P + +L L L + + +
Sbjct: 363 SVYQFH---LLSLVINYLMIPFFSLIIMPLAIGGGILYPLFPGLGAVVNAGLILFHRGLA 419
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
+A+ G++P V + + L MV + ++ + + FP
Sbjct: 420 ALAN----LPGTITFGKVPAW--VAVSLVLLTMVTWEKRGAVKWLVLGYVVTFVWLHFPL 473
Query: 218 SFSPDLLISEKGNLVALVDK---NTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDL 274
+ +G+ + + + ++ + +F WK + +A + L
Sbjct: 474 QGEVTFVDIGQGDCIIIREPFNRRVMMIDTGGKLNFQTEGWKKRTNSATDKATNTSLNYL 533
Query: 275 QEKNQSSLKEILRSMQPRKFL 295
+ + L + S +
Sbjct: 534 KSEGIDYLDAVWLSHSDADHI 554
>gi|302206694|gb|ADL11036.1| Competence protein ComE-like protein [Corynebacterium
pseudotuberculosis C231]
gi|308276937|gb|ADO26836.1| Competence protein ComE-like protein [Corynebacterium
pseudotuberculosis I19]
Length = 555
Score = 46.3 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 50/132 (37%), Gaps = 7/132 (5%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV-VIPAGLIAILLMILSLDNIP 145
+ + I + + ANI+A P++ + VI +A++ + +D
Sbjct: 348 AVAVAAELVTVPLVAMMAGRISLVSVPANIIAAPVVPLITVIGLAAVALVWIP-PIDWPV 406
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV-----TIVVEFLLMVFCKTNIRHI 200
++ I +AH S +PE++ + TI ++L+ F +
Sbjct: 407 IQLLDLLASWIGIVAHWCSSWRGSTLGVPMPESALLGTLWVTIAAVWVLLAFQSQKAWPL 466
Query: 201 GSIMIGITIIIL 212
G ++ +I+
Sbjct: 467 GIALLVAAPVIV 478
>gi|315224125|ref|ZP_07865965.1| competence protein [Capnocytophaga ochracea F0287]
gi|314945858|gb|EFS97867.1| competence protein [Capnocytophaga ochracea F0287]
Length = 636
Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 16/133 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSES-HNTWTWKKISSIKQSFLNEIRANIGTYG 92
L+D F Y + +I FY + + + E+ + W W FL + A I
Sbjct: 351 LYDVGFQLSYAAVFSIMKFYPVMRKWWQPENKYLQWIWSL-------FLVGLSAQIVVL- 402
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAW 151
+ +FH P+ ++N++ +P+L ++I G+IA+ L L V+
Sbjct: 403 -----PISLYYFHQFPILFFVSNLVVVPLLQPILI-GGIIALCLGSFGILPYAIVFVLEK 456
Query: 152 GLDIIIHIAHRIS 164
+ ++ + I+
Sbjct: 457 LIALMNFLVAFIA 469
>gi|308174346|ref|YP_003921051.1| DNA channel for uptake in competent cells [Bacillus
amyloliquefaciens DSM 7]
gi|307607210|emb|CBI43581.1| DNA channel for uptake in competent cells [Bacillus
amyloliquefaciens DSM 7]
Length = 745
Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 8/101 (7%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F+ Y+ + G+ S S + S + + A + S+
Sbjct: 280 FNPYF--LWQAGFQLSFAVSASLILSSSILKKAGKSRLAGLAMASFIAEL------SSLP 331
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
FL+ HF I + N++ +P + VIP +I LL++L
Sbjct: 332 FLLYHFQQISLVSFPMNMVMVPFYTLFVIPVSVIGFLLLLL 372
>gi|294055979|ref|YP_003549637.1| ComEC/Rec2-related protein [Coraliomargarita akajimensis DSM 45221]
gi|293615312|gb|ADE55467.1| ComEC/Rec2-related protein [Coraliomargarita akajimensis DSM 45221]
Length = 529
Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 25/192 (13%), Positives = 70/192 (36%), Gaps = 11/192 (5%)
Query: 34 LFDFNFSSYYK-GISAIGYFYSIPKMIYSSESHNT--WTWKKISSIKQSFLNEIRANIGT 90
F ++S + I ++ S+ + + W W+ S + I +I
Sbjct: 334 GFQLSYSVVLSILLFGIPFYNSLQQATEPFRWLPSEDWNWRHQLSKRVHTTLCISFSISL 393
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV-- 148
+++ HF I ++ N+ I + S +VI +G++++ + ++ + +
Sbjct: 394 AAWLASAPLCAGHFGYISPASILLNVALIGLAS-LVICSGVLSLATSLCGIEGLASFINH 452
Query: 149 -MAWGLDIIIH-IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRH---IGSI 203
G+ I+ + ++ ++ F P + ++ + C ++H
Sbjct: 453 AAWLGIAIMDYTVSAFTALPTLVFHCPNFPLSYSYAALIGLFASLACYRRMQHPARYALP 512
Query: 204 MIGITIIILFTF 215
I + + +
Sbjct: 513 SIVVAFCLYLGW 524
>gi|300858996|ref|YP_003783979.1| hypothetical protein cpfrc_01579 [Corynebacterium
pseudotuberculosis FRC41]
gi|300686450|gb|ADK29372.1| putative membrane protein [Corynebacterium pseudotuberculosis
FRC41]
gi|302331247|gb|ADL21441.1| Competence protein ComE-like protein [Corynebacterium
pseudotuberculosis 1002]
Length = 555
Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 50/132 (37%), Gaps = 7/132 (5%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV-VIPAGLIAILLMILSLDNIP 145
+ + I + + ANI+A P++ + VI +A++ + +D
Sbjct: 348 AVAVAAELVTVPLVAMMAGRISLVSVPANIIAAPVVPLITVIGLAAVALVWIP-PIDWPV 406
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV-----TIVVEFLLMVFCKTNIRHI 200
++ I +AH S +PE++ + TI ++L+ F +
Sbjct: 407 IQLLDLLASWIGIVAHWCSSWRGSTLGVPMPESALLGTLWVTIAAVWVLLAFQSQKAWPL 466
Query: 201 GSIMIGITIIIL 212
G ++ +I+
Sbjct: 467 GIALLVAAPVIV 478
>gi|42783452|ref|NP_980699.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus ATCC 10987]
gi|42739381|gb|AAS43307.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus ATCC 10987]
Length = 773
Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 55/138 (39%), Gaps = 5/138 (3%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIP 145
I ++ L+ HF Y + NIL +P LS VV+ ++ ++ + + L
Sbjct: 358 ISFISQLVSTPILLYHFGYFSPYSIFLNILYVPFLSLVVLSCSIVILICIPVIPFLAKRL 417
Query: 146 FGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGSI 203
V++ GL++ +++ ++ G+ V + +++ + + G +
Sbjct: 418 ANVLSIGLNLSNDFLSYCENLPFTRLNFGQTSILLVALYCVSIISILMVWERRMA-KGIL 476
Query: 204 MIGITIIILFTFPYSFSP 221
I + + + + P
Sbjct: 477 FISAGVFLFISTCHYVYP 494
>gi|314936292|ref|ZP_07843639.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus hominis subsp. hominis C80]
gi|313654911|gb|EFS18656.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus hominis subsp. hominis C80]
Length = 729
Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 47/117 (40%), Gaps = 19/117 (16%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
I S+ I I HF+ G I+N++ +P+ SF++ P ++ + D
Sbjct: 333 ITIIAQFSSMIISIYHFNQFQWIGFISNVIFVPLYSFIIFPLSIVLFIFYHFFSD----- 387
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGR---------IPETSFVTIVVEFLLMVFCKT 195
L I +A+++ H+ I + S ++++ F+L+ T
Sbjct: 388 -----LRYINMVANQLFELHDRIMQPFILFRNYQINIADQSNLSLLYCFILLTLLTT 439
>gi|228476141|ref|ZP_04060849.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus hominis SK119]
gi|228269964|gb|EEK11444.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus hominis SK119]
Length = 729
Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 47/117 (40%), Gaps = 19/117 (16%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
I S+ I I HF+ G I+N++ +P+ SF++ P ++ + D
Sbjct: 333 ITIIAQFSSMIISIYHFNQFQWIGFISNVIFVPLYSFIIFPLSIVLFIFYHFFSD----- 387
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGR---------IPETSFVTIVVEFLLMVFCKT 195
L I +A+++ H+ I + S ++++ F+L+ T
Sbjct: 388 -----LRYINMVANQLFELHDRIMQPFILFRNYQINIADQSNLSLLYCFILLTLLTT 439
>gi|158520784|ref|YP_001528654.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfococcus oleovorans Hxd3]
gi|158509610|gb|ABW66577.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfococcus oleovorans Hxd3]
Length = 840
Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 56/150 (37%), Gaps = 19/150 (12%)
Query: 32 PGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTY 91
P LF +F + + I + + + + + + + L A +GT
Sbjct: 366 PALFAVSFQLSFSAVFFIVFGMGVMQARVA-----RISRRPVKIAANFLLVSFLAIVGTL 420
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
+ +F+ + GL +N + +P++ FV +P GL+ ++ + P G + +
Sbjct: 421 ------PLTLHYFNQTSLVGLASNCILVPMVGFVAVPLGLVGVIG---HMAWPPAGSLLF 471
Query: 152 GLDII-----IHIAHRISVAHNEFCIGRIP 176
G+ + +A I+ P
Sbjct: 472 GMAGTVVQGALAVAQAIAGLPFAAAHTITP 501
>gi|170733465|ref|YP_001765412.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia cenocepacia MC0-3]
gi|169816707|gb|ACA91290.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia cenocepacia MC0-3]
Length = 829
Score = 46.3 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 24/181 (13%), Positives = 59/181 (32%), Gaps = 9/181 (4%)
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
W + + ++ + + + F + + G N AIP
Sbjct: 412 RSWLRGWATRGRRRLAEATR------VQYAVTIGLAPLTAAWFAQVSLSGPFGNAFAIPW 465
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+S VV P ++A + + LD F + L+ ++ + ++ R+P+ +
Sbjct: 466 VSSVVTPV-VLAGIALPPPLDAAAFRLAHAALEPMMTLLGYLADWPAGVFWLRMPDWPVL 524
Query: 182 TIV-VEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
+ V + + +R + + P L + + G A++ +
Sbjct: 525 ALACVGVAWALMPRGWPLRWAAPLTWLPLVAPAPDAPPPGGFRLTVLDVGQGAAVLVETA 584
Query: 240 L 240
Sbjct: 585 R 585
>gi|329123094|ref|ZP_08251664.1| competence protein EC [Haemophilus aegyptius ATCC 11116]
gi|327471649|gb|EGF17091.1| competence protein EC [Haemophilus aegyptius ATCC 11116]
Length = 788
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ + F+ + + G +AN++A+PI SF ++P L A+ +A G+ +
Sbjct: 382 TPLQLFLFNGLSLSGFLANLMAVPIYSFFLVPLILFAVFTNGAMFSWQLANKLAEGITWL 441
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
I + F + + +++ +
Sbjct: 442 ISLFQGNW-----FNVSFNLALVLTALCGGIFMLIIWR 474
>gi|145639650|ref|ZP_01795253.1| DNA mismatch repair protein [Haemophilus influenzae PittII]
gi|145271207|gb|EDK11121.1| DNA mismatch repair protein [Haemophilus influenzae PittII]
gi|309750620|gb|ADO80604.1| Recombination protein Rec2 [Haemophilus influenzae R2866]
Length = 788
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ + F+ + + G +AN++A+PI SF+++P L A+ +A G+ +
Sbjct: 382 TPLQLFLFNGLSLSGFLANLMAVPIYSFLLVPLILFAVFTNGTMFSWQLANKLAEGITGL 441
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
I + N F + + +++ +
Sbjct: 442 ISV-----FQGNWFNVSFNLALVLTALCAGIFMLIIWR 474
>gi|292670835|ref|ZP_06604261.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292647456|gb|EFF65428.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 811
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
F + +++ + N W + + S I A + +A L HF+ +
Sbjct: 369 FLATAGLLFLAPLLNRWMKRLPHVLAGSLSITIAAQL------AALPILAWHFNQVSFSS 422
Query: 112 LIANILAIPILSFVVI--PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH-N 168
L +N+ +P++ ++I AG +A ++ + L NI F + L + + ++ +
Sbjct: 423 LFSNLFVVPLVELIIILGLAGGLAAFIVPI-LGNIVFSFDSILLGAVFEMTRALAALPFS 481
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCK 194
+ + + + + + + K
Sbjct: 482 KIWLPSMGILPGICYYILLVFICMPK 507
>gi|238753505|ref|ZP_04614868.1| hypothetical protein yruck0001_20350 [Yersinia ruckeri ATCC 29473]
gi|238708458|gb|EEQ00813.1| hypothetical protein yruck0001_20350 [Yersinia ruckeri ATCC 29473]
Length = 764
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 30/197 (15%), Positives = 70/197 (35%), Gaps = 21/197 (10%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL-LMILSLDNIP 145
++ + I FH I + + AN+ A+PI+SF+ +P L+A++ L +
Sbjct: 370 HVQLGMMLLLAPLQIGLFHGISLSAIPANLWAVPIVSFITVPTVLLALISSASTHLAELW 429
Query: 146 FGVMAWGLDI-IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK-TNIRHIGSI 203
+ L + ++ + + + +V + R
Sbjct: 430 WWASNASLTLAMLPLDSLSQSWLPRG------GDYLALSFIGWFAIVIWRFQWWRSHSVS 483
Query: 204 MIGITIIILFTFPYSF----SPDLLISEKGNLVALVDKNTLISNYSNPPSF-IFSQWKSA 258
++ + I ++F D+L + G+ +A+V + F ++WK
Sbjct: 484 VLVLCINLIFLTSRRDMAGWRVDML--DIGHGLAVVIER-----RQRAVVFDTGNRWKQG 536
Query: 259 LITPFHEAPHVQKEDLQ 275
+ P++ L+
Sbjct: 537 SMADKVILPYLNWRGLR 553
>gi|237730876|ref|ZP_04561357.1| competence domain-containing protein [Citrobacter sp. 30_2]
gi|226906415|gb|EEH92333.1| competence domain-containing protein [Citrobacter sp. 30_2]
Length = 754
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 19/177 (10%), Positives = 65/177 (36%), Gaps = 12/177 (6%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +++ + W + +Q A++ + I FH +
Sbjct: 331 ASAVAALLFWYQWVPLPDWPLSRAGRQFLA---LAHLQLGITLLLLPVQIAMFHGFSLTS 387
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILS---LDNIPFGVMAWGLDIIIHIAHRISVAHN 168
+AN+ A+P+++FV +P L +++ + +++ + + L ++ +
Sbjct: 388 FLANLFAVPLVTFVSVPLILAGMIMHLAGTVMVESSLWYLADRSLALLFW-----GLRSL 442
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPDLL 224
I + ++++ + N +R + + + +++ + D+
Sbjct: 443 PEGWINIDARWQWLAFLPGMMIIAWRLNILRTLPVVCFSVLLLLSGPLWRAPRTDVW 499
>gi|262375596|ref|ZP_06068829.1| predicted protein [Acinetobacter lwoffii SH145]
gi|262309850|gb|EEY90980.1| predicted protein [Acinetobacter lwoffii SH145]
Length = 820
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 15/138 (10%), Positives = 52/138 (37%), Gaps = 5/138 (3%)
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
+ F ++ + ++ F + ++N++AIP + +++P ++A LL
Sbjct: 410 RLYFAMKVLVESQWKIFLALFPLMMLFFKQVAWITPLSNLVAIPWIGLLIVPVDILAALL 469
Query: 137 MILS--LDNIPFGVMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
+S L ++ F + + +++ + + + + + ++ L++
Sbjct: 470 FFISEPLSSLLFQLNDIFIHMLLAFLNLLDRLFAPQLIPVAMNVWMIALCILGLLIVFLP 529
Query: 194 KT--NIRHIGSIMIGITI 209
+ + + I
Sbjct: 530 RGLVPKSWTAIACVPLCI 547
>gi|313633201|gb|EFS00079.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
seeligeri FSL N1-067]
Length = 693
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 39/99 (39%), Gaps = 2/99 (2%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F ++ + Y S + ++ ++ + I + +S
Sbjct: 251 SFILFFIIQPYVIYEVGFQLSYAVSFGIILSSRGILAKLQHPLSKSL--AISFVSTMMSS 308
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
I ++ HF+ G+ N+L +PI + ++P + +LL
Sbjct: 309 IVMMYHFYSFSWVGIFFNLLYVPIFTIFILPGCFLVLLL 347
>gi|300722538|ref|YP_003711828.1| putative recombination protein with metallo-hydrolase domain
[Xenorhabdus nematophila ATCC 19061]
gi|297629045|emb|CBJ89630.1| putative recombination protein with metallo-hydrolase domain
[Xenorhabdus nematophila ATCC 19061]
Length = 781
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 51/123 (41%), Gaps = 16/123 (13%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F + + L+AN+ A+PI+SF+ +P + ++ + L + + + + +
Sbjct: 410 FQGVNIASLVANLWAVPIISFISVPLVMSGLICIFLPVVQPFLWQL---------VDYSV 460
Query: 164 SVAHNEFCIGRIPE-----TSFVTIVVEFLLMVFCKTNIR--HIGSIMIGITIIILFTFP 216
S A + +F+ ++ + L+V + N + + I I + ++ P
Sbjct: 461 SFALAPLSVLTYSWIETGYYAFIMTLLGWFLVVIWRLNWWKSYKWLLAISIGVTACYSIP 520
Query: 217 YSF 219
+
Sbjct: 521 ANE 523
>gi|77360603|ref|YP_340178.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudoalteromonas haloplanktis TAC125]
gi|76875514|emb|CAI86735.1| putative DNA internalization-related competence protein ComEC/Rec2
with Metallo-beta-lactamase superfamily domain
[Pseudoalteromonas haloplanktis TAC125]
Length = 755
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 68/173 (39%), Gaps = 12/173 (6%)
Query: 83 EIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD 142
+ I + F+ + + GL+ N++AIP+L+F+++P L+ +L + LD
Sbjct: 377 GMLCAIQGALFIGLLPLSLYFFNGVSLAGLVLNLIAIPLLAFIIMPLLLVVAILSSI-LD 435
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNEFCIG----RIPETSFVTIVVEFLLMVFC-KTNI 197
M+ + + + + + G + + ++ ++ M+
Sbjct: 436 ------MSLIVSLFDPVLYFLYQQLMAIPPGWRWFNVGTITLDIVMFSYVTMLLLYLVKF 489
Query: 198 RHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
+ + I + + ++ + S + L+ L++K+ Y PS+
Sbjct: 490 KWLACIPLSVLLVDSYFTSKSDWQVNIFDVGHGLMVLLEKDNNALIYDFGPSY 542
>gi|300087171|ref|YP_003757693.1| DNA internalization-like competence protein ComEC/Rec2
[Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299526904|gb|ADJ25372.1| DNA internalization-related competence protein ComEC/Rec2
[Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 792
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 22/168 (13%), Positives = 56/168 (33%), Gaps = 11/168 (6%)
Query: 34 LFDFNFSSYYKGISAI-GYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
F +F + I + G + +++ + ++ I + T
Sbjct: 335 SFQMSFGAMAGLIFLLPGMEHLTRRLVGRFPGSQSRFYQPAYYIGAGLA------VTTAA 388
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW- 151
+ + +F + G IA + A+P++ ++ A L + + +P + W
Sbjct: 389 VVGVAPLIAYYFGALATAGGIATLAAMPVVPLIIFGALTTGALALASPVLAVPTAALTWA 448
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRH 199
GL ++ + + + F+ + L + + N R
Sbjct: 449 GLTYLVGVVDWFARWPLPEFGVF--DAGFIWLFYGLLGLGAWRLN-RW 493
>gi|167010885|ref|ZP_02275816.1| competence-related protein [Francisella tularensis subsp.
holarctica FSC200]
Length = 400
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +F V ++ANI+AIP++SFV++P L+ +LL + ++ +M L
Sbjct: 330 PISVYYFGGFSVVSILANIVAIPLVSFVIVPLLLLCLLLSFIGINLWLLPMMFLKL 385
>gi|145642142|ref|ZP_01797711.1| recombination protein 2 [Haemophilus influenzae R3021]
gi|145273133|gb|EDK13010.1| recombination protein 2 [Haemophilus influenzae 22.4-21]
Length = 788
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ + F+ + + G +AN++A+PI SF+++P L A+ +A G+ +
Sbjct: 382 TPLQLFLFNGLSLSGFLANLMAVPIYSFLLVPLILFAVFTNGTMFSWQLANKLAEGITGL 441
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
I + N F + + +++ +
Sbjct: 442 ISV-----FQGNWFNVSFNLALVLTALCAGIFMLIIWR 474
>gi|206976054|ref|ZP_03236964.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus H3081.97]
gi|222097770|ref|YP_002531827.1| DNA internalization-related competence protein comec/rec2 [Bacillus
cereus Q1]
gi|206745806|gb|EDZ57203.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus H3081.97]
gi|221241828|gb|ACM14538.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Q1]
Length = 773
Score = 46.3 bits (108), Expect = 0.009, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 56/139 (40%), Gaps = 7/139 (5%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG---LIAILLMILSLDNI 144
I ++ L+ HF Y + NIL +P LS VV+P LI I ++ +
Sbjct: 358 ISFISQLVSTPILLYHFGYFSPYSIFLNILYVPFLSLVVLPCSIVILICIPIIPFLAKRL 417
Query: 145 PFGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGS 202
V++ GL++ +++ ++ G+ P V + +++ + + G
Sbjct: 418 G-NVLSIGLNLSNDFLSYCENLPFTRLNFGQTPILLVALYCVSIISILMVWERRMT-KGI 475
Query: 203 IMIGITIIILFTFPYSFSP 221
+ I + + + + P
Sbjct: 476 LFISAGVFLFISTCHYVYP 494
>gi|319896474|ref|YP_004134667.1| inner membrane protein [Haemophilus influenzae F3031]
gi|317431976|emb|CBY80324.1| conserved inner membrane protein [Haemophilus influenzae F3031]
Length = 788
Score = 45.9 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ + F+ + + G +AN++A+PI SF+++P L A+ +A G+ +
Sbjct: 382 TPLQLFLFNGLSLSGFLANLMAVPIYSFLLVPLILFAVFTNGTMFSWQLANKLAEGITGL 441
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
I + N F + + +++ +
Sbjct: 442 ISV-----FQGNWFNVSFNLALVLTALCAGIFMLIIWR 474
>gi|145630640|ref|ZP_01786419.1| DNA mismatch repair protein [Haemophilus influenzae R3021]
gi|144983766|gb|EDJ91216.1| DNA mismatch repair protein [Haemophilus influenzae R3021]
Length = 788
Score = 45.9 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ + F+ + + G +AN++A+PI SF+++P L A+ +A G+ +
Sbjct: 382 TPLQLFLFNGLSLSGFLANLMAVPIYSFLLVPLILFAVFTNGTMFSWQLANKLAEGITGL 441
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
I + F + + +++ +
Sbjct: 442 ISVFQGNW-----FNVSFNLALVLTALCAGIFMLIIWR 474
>gi|324328229|gb|ADY23489.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 773
Score = 45.9 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 56/139 (40%), Gaps = 7/139 (5%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG---LIAILLMILSLDNI 144
I ++ L+ HF Y + NIL +P LS VV+P LI I ++ +
Sbjct: 358 ISFISQLVSTPILLYHFGYFSPYSIFLNILYVPFLSLVVLPCSIVILICIPIIPFLAKRL 417
Query: 145 PFGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGS 202
V++ GL++ +++ ++ G+ P V + +++ + + G
Sbjct: 418 G-NVLSIGLNLSNDFLSYCENLPFTRLNFGQTPILLVALYCVSIISILMVWERRMT-KGI 475
Query: 203 IMIGITIIILFTFPYSFSP 221
+ I + + + + P
Sbjct: 476 LFISAGVFLFISTCHYVYP 494
>gi|257061871|ref|YP_003139759.1| ComEC/Rec2-related protein [Cyanothece sp. PCC 8802]
gi|256592037|gb|ACV02924.1| ComEC/Rec2-related protein [Cyanothece sp. PCC 8802]
Length = 748
Score = 45.9 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 27/214 (12%), Positives = 79/214 (36%), Gaps = 36/214 (16%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F S + I +IP ++ + I+ + + +
Sbjct: 361 GFQFSFLSTFGLI------VTIPPLMKRLDWLPPAIATLIAVPLAATIWVL--------- 405
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAW 151
+ F + Y + NI+ P+++ + I G+I+ + +S L + ++ +
Sbjct: 406 ----PLSLYKFSILATYSIPTNIITSPLITAISI-GGMISSAIAFISPILGSFVVKILYY 460
Query: 152 GLDIIIHIAH-RISVAHNEFCIGRIPETSFVTI--VVEFLLMV-FCKTNIRHIGSIMIGI 207
+ +I + + + + +G++ + I ++ + + F + + +G+
Sbjct: 461 PVYFLIKSLEIIVHLPGSYYAVGKLSLGVMLLIYVILVLIWLNPFWQRYWKLAALFSLGL 520
Query: 208 TIIILF----------TFPYSFSPDLLISEKGNL 231
I+ + +P ++I ++G +
Sbjct: 521 IILPIIYQNLTLIKVTILEAKSNPVVVIQDRGKV 554
>gi|217961815|ref|YP_002340385.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH187]
gi|229141063|ref|ZP_04269605.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus BDRD-ST26]
gi|217066299|gb|ACJ80549.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus AH187]
gi|228642341|gb|EEK98630.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus BDRD-ST26]
Length = 773
Score = 45.9 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 56/139 (40%), Gaps = 7/139 (5%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG---LIAILLMILSLDNI 144
I ++ L+ HF Y + NIL +P LS VV+P LI I ++ +
Sbjct: 358 ISFISQLVSTPILLYHFGYFSPYSIFLNILYVPFLSLVVLPCSIVILICIPIIPFLAKRL 417
Query: 145 PFGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGS 202
V++ GL++ +++ ++ G+ P V + +++ + + G
Sbjct: 418 G-NVLSIGLNLSNDFLSYCENLPFTRLNFGQTPILLVALYCVSIISILMVWERRMT-KGI 475
Query: 203 IMIGITIIILFTFPYSFSP 221
+ I + + + + P
Sbjct: 476 LFISAGVFLFISTCHYVYP 494
>gi|333029263|ref|ZP_08457324.1| ComEC/Rec2-related protein [Bacteroides coprosuis DSM 18011]
gi|332739860|gb|EGJ70342.1| ComEC/Rec2-related protein [Bacteroides coprosuis DSM 18011]
Length = 692
Score = 45.9 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 60/174 (34%), Gaps = 15/174 (8%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + + +I F + S I + + ++
Sbjct: 348 LFDVGFQLSFSAVLSILLFSRP----------TLELYHPKSKIGIYLWSSLVISLVAQLG 397
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
S +I +F P Y L+AN++ IP+++ ++ + + SL ++ +
Sbjct: 398 --TSPLIIYYFGSFPTYFLLANLIVIPLITILLYILVVSVLTYACTSLSSVLLLIAIHLT 455
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV---FCKTNIRHIGSIM 204
+ + + S T +T++ L V + ++ + I+
Sbjct: 456 EWLNGVVRMFSTLPLSSIKSLYINTFELTLLYAILFFVYKLIFSSRVKWLYCIL 509
>gi|262275602|ref|ZP_06053411.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Grimontia hollisae CIP 101886]
gi|262219410|gb|EEY70726.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Grimontia hollisae CIP 101886]
Length = 749
Score = 45.9 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 7/117 (5%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F + L +N++A+PI+S + +P LIA+++ + + + + L I I
Sbjct: 379 FGGVSFLSLFSNLIAVPIVSLLTVPLILIALVMEWFPVAQLFWQMADMSLWPITQILD-- 436
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
I IP T + ++V + K IR I + + +L +
Sbjct: 437 KANMGWLDIQNIPLTFILAVMVILYGLTTFKL-IR----IPVLGAVALLTLVSWRHP 488
>gi|114777002|ref|ZP_01452022.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Mariprofundus ferrooxydans PV-1]
gi|114552523|gb|EAU54983.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Mariprofundus ferrooxydans PV-1]
Length = 824
Score = 45.9 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 27/172 (15%), Positives = 65/172 (37%), Gaps = 6/172 (3%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEI--RANIGTYGSASASIFLIKHFHCIPV 109
F + ++ + + + +Q + I A + + + + F +PV
Sbjct: 359 FSATAALLLWAVQSRADHALQAAGRRQRLITAITTLAWVSLVATLATLPITLATFGRLPV 418
Query: 110 YGLIANILAIPILSFVVIPAGLIAILLMILS---LDNIPFGVMAWGLDIIIHIAHRIS-V 165
Y + AN+L +PI + +V+PA L+A L + + L + + +H+ R++ +
Sbjct: 419 YSIPANLLLVPIYALLVMPAALLAELTALFNLPTLAGGFMQIAGMAAEAGLHLLQRMTHL 478
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
P + L + R + + + + +I L++
Sbjct: 479 PAGNLWAVHPPLWLGGLYLAGMLFAGRQALHKRKLQAALSALLVIGLYSSAV 530
>gi|145629075|ref|ZP_01784874.1| recombination protein [Haemophilus influenzae 22.1-21]
gi|144978578|gb|EDJ88301.1| recombination protein [Haemophilus influenzae 22.1-21]
Length = 703
Score = 45.9 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ + F+ + + G +AN++A+PI SF+++P L A+ +A G+ +
Sbjct: 382 TPLQLFLFNGLSLSGFLANLMAVPIYSFLLVPLILFAVFTNGTMFSWQLANKLAEGITGL 441
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
I + N F + + +++ +
Sbjct: 442 ISV-----FQGNWFNVSFNLALVLTALCAGIFMLIIWR 474
>gi|229543792|ref|ZP_04432852.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
coagulans 36D1]
gi|229328212|gb|EEN93887.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
coagulans 36D1]
Length = 760
Score = 45.9 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 53/140 (37%), Gaps = 10/140 (7%)
Query: 57 KMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANI 116
++ ++ + + + + + I +A L F+ + GL+AN+
Sbjct: 328 QLSFAVCAALLLSGPLLERFRGPLQKGL--AISFISQLAALPILSYSFYAFSIAGLVANL 385
Query: 117 LAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVA----HNEFCI 172
+P+ ++V++P +A + F + A D ++ ++ + A +
Sbjct: 386 FYVPLYTYVLLPLAALAFVSE---WAPPLFSIFATCFDGLVTLSEKTGEAFDGRWSTLVT 442
Query: 173 GRIPETSFVTIV-VEFLLMV 191
GR P + + F +V
Sbjct: 443 GRPPYWGLILMTGAGFYGLV 462
>gi|53715185|ref|YP_101177.1| competence protein [Bacteroides fragilis YCH46]
gi|52218050|dbj|BAD50643.1| competence protein [Bacteroides fragilis YCH46]
Length = 699
Score = 45.9 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 63/161 (39%), Gaps = 19/161 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA--NIGTY 91
LFD F + ++AI Y W ++++ + S L ++ A ++
Sbjct: 357 LFDVGFQLSFSAVAAILLLY-------------PWLFRQLP-VGNSLLKKVWALMSVSLA 402
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
+ ++ +F P + L+ N+L IP++S ++ A + ++L + F V+
Sbjct: 403 AQIGTAPLVLLYFSRFPTHFLLTNLLVIPLVS-GIMYATVALLVLTPFPMLYTGFSVVVR 461
Query: 152 GL-DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
L D + + + I R+ +L++
Sbjct: 462 SLVDWLNTMVRWVEHLPLA-SIDRVWIYPTEAFAFYLVLLI 501
Score = 43.2 bits (100), Expect = 0.070, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 68/221 (30%), Gaps = 25/221 (11%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGY------------FYSIP 56
+ + + +A +SPPS P FD+ YKGIS I + F
Sbjct: 148 EGLRSGDELIFLAHVSPPSNNGNPDEFDYARYLRYKGISGIAFVASGNWKITGYRFSRSC 207
Query: 57 KMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANI 116
+ I + + A Y + V G +++
Sbjct: 208 RQIALEYRERILDQYRALKFNSDEFAVLAALTVGYKEELSEDI----RETYSVSGA-SHV 262
Query: 117 LAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP 176
LA+ L G + ++L+ L +P +G+ + + ++ F G P
Sbjct: 263 LALSGLHI-----GFLYMMLLFF-LKWLPGNA--FGVRLFRAVVIITALWGFAFFTGLSP 314
Query: 177 ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
I+ L + + + I+L P+
Sbjct: 315 SVVRSVIMFSLLALSVLSRRTGISLNTLALTACIMLVVHPF 355
>gi|237712462|ref|ZP_04542943.1| competence protein [Bacteroides sp. 9_1_42FAA]
gi|229453783|gb|EEO59504.1| competence protein [Bacteroides sp. 9_1_42FAA]
Length = 650
Score = 45.9 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 44/110 (40%), Gaps = 5/110 (4%)
Query: 79 SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI 138
++ I A + + +I F PV L AN++ P++ FV+I + + +L
Sbjct: 389 RYIWGIVA-VSLAAQLGTAPVVIYKFAYFPVCFLPANLIVAPLV-FVIIYGSVASFVLSP 446
Query: 139 LSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL 188
++ + V+ GL+ ++ + + + I + V L
Sbjct: 447 FTV--LHIWVV-KGLNGVLWLLNNSMQWVGDLPISHSGDIHLSLFQVGIL 493
>gi|154686817|ref|YP_001421978.1| hypothetical protein RBAM_023870 [Bacillus amyloliquefaciens FZB42]
gi|154352668|gb|ABS74747.1| ComEC [Bacillus amyloliquefaciens FZB42]
Length = 783
Score = 45.9 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 8/101 (7%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F+ Y+ + G+ S S + S + + A + S+
Sbjct: 318 FNPYF--LWQAGFQLSFAVSASLILSSSILKKAGKSRLAGLAMASFIAEL------SSLP 369
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
FL+ HF I + N++ +P + VIP +I LL++L
Sbjct: 370 FLLYHFQQISLVSFPMNMVMVPFYTLFVIPVSVIGFLLLLL 410
>gi|288549443|ref|ZP_05967105.2| hypothetical protein ENTCAN_05483 [Enterobacter cancerogenus ATCC
35316]
gi|288319104|gb|EFC58042.1| DNA internalization-related competence protein ComEC/Rec2
[Enterobacter cancerogenus ATCC 35316]
Length = 754
Score = 45.9 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 71/184 (38%), Gaps = 29/184 (15%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F+ ++A+ +++ + S + ++ L +
Sbjct: 326 SFALSAFAVAALIFWFQWLPLPDWRWSRRLRPIVNLVHLQAGMLVLLLPLQVVI------ 379
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
FH + + L+AN+ A+P+++FV +P L+ + L +L L L+ II
Sbjct: 380 ------FHGVSLSSLVANLFAVPLVTFVSVPLILLGMALHLLPL---------TSLETII 424
Query: 158 HIAHRISVAHNEFCIGRIPETSFV-------TIVVEFLLMVFCKTN-IRHIGSIMIGITI 209
A S+ + + R+P+ + + ++ + R + ++ + ++
Sbjct: 425 WFAADKSLGVLFWLLMRLPDGWLGVDQRWQYLTLFPWFALIGWRFRAWRVVPAVCLATSV 484
Query: 210 IILF 213
++ F
Sbjct: 485 MMAF 488
>gi|167630486|ref|YP_001680985.1| DNA internalization-related competence protein comec/rec2
[Heliobacterium modesticaldum Ice1]
gi|167593226|gb|ABZ84974.1| DNA internalization-related competence protein comec/rec2
[Heliobacterium modesticaldum Ice1]
Length = 881
Score = 45.9 bits (107), Expect = 0.011, Method: Composition-based stats.
Identities = 32/250 (12%), Positives = 87/250 (34%), Gaps = 34/250 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRAN------ 87
F +F++ + + F ++ + + + + ++ + + +
Sbjct: 375 GFQLSFAATW---GILYLFPTLHRALQPANERLVRSLERRLDVPLTIAGSFVRSGIRLIS 431
Query: 88 ----IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
+ + S + +F+ + GL+AN+ I++ V I + +LL I S
Sbjct: 432 DALLVSLAAQLAVSPLGLYYFNLFSIVGLLANLAGGAIIALVTILGFVSFLLLPIWSTGA 491
Query: 144 IPFGVMA-WGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK----TNIR 198
+ F +++ + ++ H ++ P + + +L+++F + ++R
Sbjct: 492 LSFTLVSAAAVSLLNTFLHSLAGLPGAALTVATPSP--LLLTAYYLVLIFFRESLTGHLR 549
Query: 199 H--------IGSIMIGITIIILFTFPYSFSPDLLIS------EKGNLVALVDKNTLISNY 244
+ + I+ F +L I+ G L+ ++ +
Sbjct: 550 PKTAAYIQDWSVRLAPVLFILFLAFRLLAPEELRITFMDVGQGDGILIETPGGKKVLVDT 609
Query: 245 SNPPSFIFSQ 254
PP FI
Sbjct: 610 PGPPLFILRN 619
>gi|237726653|ref|ZP_04557134.1| competence protein [Bacteroides sp. D4]
gi|229435179|gb|EEO45256.1| competence protein [Bacteroides dorei 5_1_36/D4]
Length = 650
Score = 45.9 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 44/110 (40%), Gaps = 5/110 (4%)
Query: 79 SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI 138
++ I A + + +I F PV L AN++ P++ FV+I + + +L
Sbjct: 389 RYIWGIVA-VSLAAQLGTAPVVIYKFAYFPVCFLPANLIVAPLV-FVIIYGSVASFVLSP 446
Query: 139 LSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL 188
++ + V+ GL+ ++ + + + I + V L
Sbjct: 447 FTV--LHIWVV-KGLNGVLWLLNNSMQWVGDLPISHSGDIHLSLFQVGIL 493
>gi|225012320|ref|ZP_03702756.1| ComEC/Rec2-related protein [Flavobacteria bacterium MS024-2A]
gi|225003297|gb|EEG41271.1| ComEC/Rec2-related protein [Flavobacteria bacterium MS024-2A]
Length = 672
Score = 45.9 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 66/187 (35%), Gaps = 26/187 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F ++ + + + ++ + + W KKI ++ I
Sbjct: 348 GFQLSYLAVFGILGIY-------PLLKKLWNPSNWFLKKIWNLA---------AISIAAQ 391
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-GVMAWG 152
+ S I +FH P L++NI+ +P + LI + ++L+ N G
Sbjct: 392 IAVSPISIYYFHQFPSLFLLSNIIILPFFGAFL-SLSLIILFAILLNFSNPLLFQFYDIG 450
Query: 153 LDIIIHIAHRISVAHNEF--CIGRIPETSFVT---IVVEFLLM---VFCKTNIRHIGSIM 204
+D + I + ++ I ++F+ I++ L F K + ++
Sbjct: 451 VDCLNKIINWVAQQEAFLFENIYYSASSTFLLYCIIILAVLFFYKKTFLKGTWVLLFILV 510
Query: 205 IGITIII 211
+I+
Sbjct: 511 FISNLIL 517
>gi|207722856|ref|YP_002253290.1| dna translocation competence protein coma [Ralstonia solanacearum
MolK2]
gi|206588040|emb|CAQ18620.1| dna translocation competence protein coma [Ralstonia solanacearum
MolK2]
Length = 834
Score = 45.9 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 20/173 (11%), Positives = 43/173 (24%), Gaps = 10/173 (5%)
Query: 30 AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIG 89
F +F + A + + W+ + + I
Sbjct: 365 VMSAGFWLSFGAVAVIFLATRMAAADAGGNDRQSTWPRRAWRALCGGAR---------IQ 415
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM 149
+ + F + V AN LAIP++S V P LI L
Sbjct: 416 LAVTFGLLPLTLLLFQQVSVVSAAANALAIPVVSLVTTPLALIGAAL-PERWAQPVLAWA 474
Query: 150 AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
++ ++ + + + + + ++ R
Sbjct: 475 EASFGWLVSWLDGLAAPAWSVWMAPVAPAWAWLLAIGGVPLLLAPGGHRAWAW 527
>gi|325917580|ref|ZP_08179780.1| DNA internalization-related competence protein ComEC/Rec2
[Xanthomonas vesicatoria ATCC 35937]
gi|325536214|gb|EGD08010.1| DNA internalization-related competence protein ComEC/Rec2
[Xanthomonas vesicatoria ATCC 35937]
Length = 782
Score = 45.9 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 65/172 (37%), Gaps = 10/172 (5%)
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI 132
S ++ ++ A +G + F + G +AN++AIP +FVV+P L+
Sbjct: 373 RSILRGFLSAQMVATVGLLPLTVSL------FGQASLVGPLANLVAIPWWTFVVVPLCLL 426
Query: 133 AILLMILSLDN--IPFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLL 189
L L + + W ++ + + + + + + ++
Sbjct: 427 GTALEALHAGAGVWAWQLAGWCFELTWPVFVWLGQTTVALWWVPESDGIALIAALLGAFW 486
Query: 190 MVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
++ + T + + ++ + T P + DL + + G +A++ +
Sbjct: 487 LLLPRGTPGKAVAMLLWLPLLWPDRTLPGAGEADLQVLDVGQGLAVLVRTQR 538
>gi|265752168|ref|ZP_06087961.1| competence protein [Bacteroides sp. 3_1_33FAA]
gi|263236960|gb|EEZ22430.1| competence protein [Bacteroides sp. 3_1_33FAA]
Length = 639
Score = 45.6 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 44/110 (40%), Gaps = 5/110 (4%)
Query: 79 SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI 138
++ I A + + +I F PV L AN++ P++ FV+I + + +L
Sbjct: 378 RYIWGIVA-VSLAAQLGTAPVVIYKFAYFPVCFLPANLIVAPLV-FVIIYGSVASFVLSP 435
Query: 139 LSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL 188
++ + V+ GL+ ++ + + + I + V L
Sbjct: 436 FTV--LHIWVV-KGLNGVLWLLNNSMQWVGDLPISHSGDIHLSLFQVGIL 482
>gi|212691034|ref|ZP_03299162.1| hypothetical protein BACDOR_00524 [Bacteroides dorei DSM 17855]
gi|212666266|gb|EEB26838.1| hypothetical protein BACDOR_00524 [Bacteroides dorei DSM 17855]
Length = 639
Score = 45.6 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 44/110 (40%), Gaps = 5/110 (4%)
Query: 79 SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI 138
++ I A + + +I F PV L AN++ P++ FV+I + + +L
Sbjct: 378 RYIWGIVA-VSLAAQLGTAPVVIYKFAYFPVCFLPANLIVAPLV-FVIIYGSVASFVLSP 435
Query: 139 LSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL 188
++ + V+ GL+ ++ + + + I + V L
Sbjct: 436 FTV--LHIWVV-KGLNGVLWLLNNSMQWVGDLPISHSGDIHLSLFQVGIL 482
>gi|83748269|ref|ZP_00945295.1| DNA translocation competence protein ComA [Ralstonia solanacearum
UW551]
gi|83725110|gb|EAP72262.1| DNA translocation competence protein ComA [Ralstonia solanacearum
UW551]
Length = 846
Score = 45.6 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 20/173 (11%), Positives = 42/173 (24%), Gaps = 10/173 (5%)
Query: 30 AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIG 89
F +F + A + + W+ + + I
Sbjct: 377 VMSAGFWLSFGAVAVIFLATRMAAADAGGNDRQSTWPRRAWRALCGGAR---------IQ 427
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM 149
+ + F + V AN LAIP++S V P LI L
Sbjct: 428 LAVTFGLLPLTLLLFQQVSVVSAAANALAIPVVSLVTTPLALIGAAL-PERWAQPVLAWA 486
Query: 150 AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
++ ++ + + + + ++ R
Sbjct: 487 EASFGWLVSWLDGLAAPAWSVWTAPVAPAWAWLLAIGGVPLLLAPGGHRAWAW 539
>gi|160890849|ref|ZP_02071852.1| hypothetical protein BACUNI_03294 [Bacteroides uniformis ATCC 8492]
gi|156859848|gb|EDO53279.1| hypothetical protein BACUNI_03294 [Bacteroides uniformis ATCC 8492]
Length = 678
Score = 45.6 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 68/184 (36%), Gaps = 17/184 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + ++AI + +Y+ WK + + + +
Sbjct: 336 LFDVGFQLSFSAVAAIVL---VQPKLYA-------LWKVDNRFLRYLWGLM--TVSVAAQ 383
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWG 152
+ +I +F + L+ N+ IP++S V+ + + ++L L ++ V+
Sbjct: 384 LGTAPLVIFYFSRFSTHFLLTNLWVIPMVSLVLY-SAVFLLMLTPLPFVQHLFARVVEAL 442
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV---FCKTNIRHIGSIMIGITI 209
+ + + I + V +V FL M F + +R + ++ +
Sbjct: 443 VHVQNEVLRWIERLPGAAVDDIWLDIWGVLLVYLFLGMAYYGFLRLTVRRVCFALLALLA 502
Query: 210 IILF 213
++ +
Sbjct: 503 VVSW 506
>gi|56460620|ref|YP_155901.1| DNA uptake-related membrane-associated competence protein
[Idiomarina loihiensis L2TR]
gi|56179630|gb|AAV82352.1| DNA uptake-related membrane-associated competence protein
[Idiomarina loihiensis L2TR]
Length = 765
Score = 45.6 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 42/106 (39%), Gaps = 4/106 (3%)
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+W W K + + S FL+ F ++ + N+L +P++SF +
Sbjct: 363 SWRWSKSRGRFSAVKSLWSIQWLLLVVMSPLSFLL--FGGFSLFAPVVNLLVLPVISFWL 420
Query: 127 IPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEF 170
+P LI +L++ + + + + + + + ++ +
Sbjct: 421 LPLALIGTVLVLFDSGFAVLFWQLAEFPVSYLNPLLEAVAGHPANW 466
>gi|157146398|ref|YP_001453717.1| hypothetical protein CKO_02157 [Citrobacter koseri ATCC BAA-895]
gi|157083603|gb|ABV13281.1| hypothetical protein CKO_02157 [Citrobacter koseri ATCC BAA-895]
Length = 754
Score = 45.6 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 68/173 (39%), Gaps = 12/173 (6%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
+++ +I+ + W + + ++ + I FH + V
Sbjct: 331 AFAVAALIFWYQWFPVPAWAL---PRAGKVALDLVHLQLGITLLLLPVQIALFHGVSVTS 387
Query: 112 LIANILAIPILSFVVIP---AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
+AN+ A+P+++F+ +P AG+I L L ++ + + LD++ ++
Sbjct: 388 FLANLFAVPLVTFISVPLTLAGMIGHLTGPLMVEEGLWALADASLDVL-----FRALKSL 442
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
I + +L ++ + N +I + ++L ++P+ +P
Sbjct: 443 PEGWINIDYRWQYLSLAPWLTLMAWRLNA-WRTYPVICLFGVLLLSWPFWRTP 494
>gi|261405574|ref|YP_003241815.1| DNA internalization-like competence protein ComEC/Rec2
[Paenibacillus sp. Y412MC10]
gi|261282037|gb|ACX64008.1| DNA internalization-related competence protein ComEC/Rec2
[Paenibacillus sp. Y412MC10]
Length = 924
Score = 45.6 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
I + I +F+ + + + AN++ +P++S VV+P G++++L + +
Sbjct: 428 VGITVVAQLISFPLTIHYFNQVSLISVFANLILVPVISLVVLPLGMVSLL-----MGWVW 482
Query: 146 FGVMAW---GLDIIIHIAHRISVAHNEFCI--GRIPETSFVTIVVEFLLM 190
W + + HI RI N + P S I+ F+++
Sbjct: 483 MRGAGWLAAVTEWLNHITFRIVEWMNGSSVFMTLWPSPSLAWILCYFVVL 532
>gi|73540781|ref|YP_295301.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Ralstonia eutropha JMP134]
gi|72118194|gb|AAZ60457.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Ralstonia eutropha JMP134]
Length = 800
Score = 45.6 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 57/177 (32%), Gaps = 16/177 (9%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + + I S P + I+ + L+ R
Sbjct: 361 FWLSFGAVGVIFLAASRPHVPVRGWW---------PRIRAALLSAARTQWAVTVGLV--P 409
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
+ F PV IAN +AIP++S V P L+ + + ++L + L ++
Sbjct: 410 LTLLLFRQFPVISPIANAVAIPVVSMFVTPLALLGAV-VPMTLAAPLLVLAHGALAWLVL 468
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT----NIRHIGSIMIGITIII 211
+ ++ + + + L++ IR G ++I ++
Sbjct: 469 VLQWLASSEWAVWETAQAGVLETVLALAGTLILLAPAVFGLRIRLHGVLLILPMVVA 525
>gi|332969250|gb|EGK08278.1| competence factor transporting permease/ATP-binding protein ComA
[Kingella kingae ATCC 23330]
Length = 759
Score = 45.6 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 47/131 (35%), Gaps = 8/131 (6%)
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMA 150
+ I I F + VY + N +AIP S ++ P L+A L L + +
Sbjct: 384 AATLVGGIATIFLFGILAVYSPLVNAVAIPFFSSILTPLALVASALPFAPLQRLAAWLGE 443
Query: 151 WGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITII 210
+ I++ ++ + E + P F + L+++ + + II
Sbjct: 444 HTIHILLALSRHL----PEQAFAQPPSFLFWLTIFSTLIILLPRG----TALKPLACVII 495
Query: 211 ILFTFPYSFSP 221
F +P
Sbjct: 496 ASFLLYTPPAP 506
>gi|289434762|ref|YP_003464634.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
seeligeri serovar 1/2b str. SLCC3954]
gi|289171006|emb|CBH27548.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
seeligeri serovar 1/2b str. SLCC3954]
Length = 723
Score = 45.6 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 39/99 (39%), Gaps = 2/99 (2%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F ++ + Y S + ++ ++ + I + +S
Sbjct: 281 SFILFFIIQPYVIYEVGFQLSYAVSFGIILSSRGILAKLQHPLSKSL--AISFVSTMMSS 338
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
+ ++ HF+ G+ N+L +PI + ++P + +LL
Sbjct: 339 VVMMYHFYSFSWVGIFFNLLYVPIFTIFILPGCFLVLLL 377
>gi|302187294|ref|ZP_07263967.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Pseudomonas syringae pv. syringae
642]
Length = 738
Score = 45.6 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLM--ILSLDNIPFGVMAWGLDIIIHIAHRIS 164
I + G AN+LA+P +S +V+P L+ LL+ + + + + L + ++
Sbjct: 376 ISLSGPFANLLAVPWVSVIVLPPALLGTLLLQVPVIGEGL-LWLAGGALQWLFVFLGAVA 434
Query: 165 VAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDL 223
A + +P ++ ++ LL++ K +R +G ++ + + ++
Sbjct: 435 AALPAWLPSAVPVWAWWLSLLGALLLLLPKGVPMRPLGWPLLLLCVFPPLESVPEGQVEV 494
Query: 224 LISEKGNLVALV 235
L + G +A++
Sbjct: 495 LQLDVGQGLAIL 506
Score = 43.2 bits (100), Expect = 0.061, Method: Composition-based stats.
Identities = 31/256 (12%), Positives = 83/256 (32%), Gaps = 14/256 (5%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
P + +L P+G P FD+ + I A G + + +
Sbjct: 117 GGQPVNSGERWRMAIKLKRPAGLVNPDAFDYQAWLLAQRIGATGTVVDGQLLAPARAAWR 176
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+++ ++ A + + + + G + ++L I +
Sbjct: 177 DAIRQRLLAVDAQGREGGLAALVLGDGSG---LSSTDWQVLQDTGTV-HLLVISGQHIGL 232
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
+ + A++ L L +A ++ + +P +V
Sbjct: 233 LAGVIYALVA---GLARWGLWPRFLPWLPWACALAFSAALGYGLLAGFEVPVRRACVMVA 289
Query: 186 EFLLMVFCKTNIRHIGSI---MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+++ + RH+G + ++ +++F + P +S + ++ + +
Sbjct: 290 ---MVLLWRLRFRHLGVVWPLLLSFNAVLIFEPLVTLQPGFWLSFAAVGILILIFSGRLG 346
Query: 243 NYSNPPSFIFSQWKSA 258
+S S+ +QW A
Sbjct: 347 AWSWWQSWTRAQWLIA 362
>gi|113867196|ref|YP_725685.1| metallo-beta-lactamase superfamily hydrolase [Ralstonia eutropha
H16]
gi|113525972|emb|CAJ92317.1| predicted hydrolase (metallo-beta-lactamase superfamily) [Ralstonia
eutropha H16]
Length = 804
Score = 45.6 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 53/148 (35%), Gaps = 10/148 (6%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHF 104
G A+ +F + P S+E W+++ S+ + A + + F
Sbjct: 368 GAVAVIFFAARPGRDASTEG----RWQRLRSVLAAGARTQWAVTIGLVPLTLLL-----F 418
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS 164
+ V +AN +AIP++S +V P L+ L ++L V + + + +S
Sbjct: 419 GQVSVVSPLANAVAIPVVSLLVTPLALLGAAL-PMALAGPVLAVAHLAMVALAAVLGWLS 477
Query: 165 VAHNEFCIGRIPETSFVTIVVEFLLMVF 192
+ + + ++
Sbjct: 478 ALPWAMWEAASAGPLALVLAALGVGLLV 505
>gi|225874141|ref|YP_002755600.1| DNA internalization-related competence protein ComEC/Rec2
[Acidobacterium capsulatum ATCC 51196]
gi|225793288|gb|ACO33378.1| DNA internalization-related competence protein ComEC/Rec2
[Acidobacterium capsulatum ATCC 51196]
Length = 902
Score = 45.6 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 25/160 (15%), Positives = 53/160 (33%), Gaps = 5/160 (3%)
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ K+ I + + + + + FH I + GL N+L +P++
Sbjct: 479 RVMRYLLPKLLRICLRIAELVIVTVAIEAAMALP--MAVDFHRITIAGLPVNLLIVPLIG 536
Query: 124 FVVIPAGLIAIL--LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
++ P + +L L + +L IP A L ++ + A P +
Sbjct: 537 ILL-PLAIATLLCVLAVPTLAVIPAAGTALFLHFVLFLVTYFGDARLGNWRVPEPLALQL 595
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ L+M R +G + + + P
Sbjct: 596 AGCLVLLVMGMGMLRWRRMGWVPGVALVALSVAVLLWPRP 635
>gi|323704215|ref|ZP_08115794.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacterium xylanolyticum LX-11]
gi|323536281|gb|EGB26053.1| DNA internalization-related competence protein ComEC/Rec2
[Thermoanaerobacterium xylanolyticum LX-11]
Length = 752
Score = 45.6 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA---GLIAILLMILSLDN 143
++ +I FH + L+ NIL +PI+S V+ ++ ++ M L +
Sbjct: 355 SVTLAAQIGTIPIIIYFFHSFSIISLLPNILIVPIVSVAVVLGFLSAILGLIYMPL---S 411
Query: 144 IPFGVMAWG-LDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMV 191
IP ++ ++I +++ S + H + + P + +L+
Sbjct: 412 IPLNLINIPVVEIALYLTRIFSQIPHASISVSQPPVYMMLCYYAVLILLT 461
>gi|23099434|ref|NP_692900.1| late competence protein [Oceanobacillus iheyensis HTE831]
gi|22777663|dbj|BAC13935.1| late competence protein (DNA binding and uptake) [Oceanobacillus
iheyensis HTE831]
Length = 769
Score = 45.6 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 28/203 (13%), Positives = 65/203 (32%), Gaps = 37/203 (18%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F F+F+ + I + W + I
Sbjct: 340 GFQFSFAVTF----------GILLSAKWITHSTSTLWNIV-------------QISFVSQ 376
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS------LDNIPFG 147
+ + +F+ ++ N++ IP +F+VIP IA L LDN
Sbjct: 377 MAILPLQLHYFYIFQPLSILLNVIIIPYFTFLVIPFMYIATLFSFFPKHLLLILDNSFQW 436
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL-MVFCKTNIRHIGSIMIG 206
+ + + ++ + +S + ++ F+ + + + + ++
Sbjct: 437 IHSIVVAFLVWVDTYLSFPLLMSGLSIAAVFAYYIFFFRFMYELELKRMKMAFLSGVLFC 496
Query: 207 ITIIILFTFPYSFSPDLLISEKG 229
+ +II PY +S++G
Sbjct: 497 LPVIIGALKPY-------VSDEG 512
>gi|270295855|ref|ZP_06202055.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273259|gb|EFA19121.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 693
Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 68/184 (36%), Gaps = 17/184 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + ++AI + +Y+ WK + + + +
Sbjct: 351 LFDVGFQLSFSAVAAIVL---VQPKLYA-------LWKVDNRFLRYLWGLM--TVSVAAQ 398
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWG 152
+ +I +F + L+ N+ IP++S V+ + + ++L L ++ V+
Sbjct: 399 LGTAPLVIFYFSRFSTHFLLTNLWVIPMVSLVLY-SAVFLLMLTPLPFVQHLFARVVEAL 457
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV---FCKTNIRHIGSIMIGITI 209
+ + + I + V +V FL M F + +R + ++ +
Sbjct: 458 VHVQNEVLRWIERLPGAAVDDIWLDIWGVLLVYLFLGMAYYGFLRLTVRRVCFALLALLA 517
Query: 210 IILF 213
++ +
Sbjct: 518 VVSW 521
>gi|213962126|ref|ZP_03390390.1| competence protein [Capnocytophaga sputigena Capno]
gi|213955132|gb|EEB66450.1| competence protein [Capnocytophaga sputigena Capno]
Length = 636
Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSES-HNTWTWKKISSIKQSFLNEIRANIGTYG 92
L+D F Y + +I FY + + + ++ + W W FL + A I
Sbjct: 351 LYDVGFQLSYAAVFSIMKFYPVMRKWWLPKNKYIRWIWSL-------FLVGLSAQIVVL- 402
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM 149
+ +FH P+ +AN++ +P+L ++I G+IA+ L LD +P+ ++
Sbjct: 403 -----PISLYYFHQFPILFFVANLVVVPLLQPILI-GGIIALCLG--GLDILPYPII 451
>gi|212638666|ref|YP_002315186.1| Late competence protein ComEC [Anoxybacillus flavithermus WK1]
gi|212560146|gb|ACJ33201.1| Late competence protein ComEC (membrane metal-binding protein and
hydrolase of the metallo-beta-lactamase superfamily)
[Anoxybacillus flavithermus WK1]
Length = 697
Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 67/166 (40%), Gaps = 23/166 (13%)
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+++ + S ++Q F+ A I T L+ HF+ + + + NI+ +P+ SF+
Sbjct: 280 SSFIQNERSVVRQLFMTSFIAQISTL------PLLLYHFYEVSLLSIPLNIIFVPLYSFI 333
Query: 126 VIPA---GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
++P L++ L M + ++ V L +++ + + ++ ++ + + +
Sbjct: 334 ILPLCFVALLSHLFMPF-VSSLIIYV----LKVVLEHTNALVLSLSDMFVLTLGRPPLLL 388
Query: 183 IVVEFLLMVFC------KTNI---RHIGSIMIGITIIILFTFPYSF 219
+V + + K R ++ +I F P
Sbjct: 389 LVAYIVSVFLFFLSFESKKRAVMFRFSFLFVMIAHVIWPFFRPTGE 434
>gi|241896586|ref|ZP_04783882.1| competence protein EC [Weissella paramesenteroides ATCC 33313]
gi|241870178|gb|EER73929.1| competence protein EC [Weissella paramesenteroides ATCC 33313]
Length = 749
Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 48/124 (38%), Gaps = 5/124 (4%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
L+ H L+AN+L +PI +++IP + I I + + W ++++
Sbjct: 363 PTLLWHTLSWHPISLLANLLIVPIFVWLIIPVIIFGIFATICHFAWLQ-DICEWIINLMQ 421
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+ E GR + + + + ++ CK + + ++ IL+ P
Sbjct: 422 LCIKFGAKIPGECLFGRPSIIFCIVLTILPLIWLITCKKRLLFL---ILVCCYAILWGMP 478
Query: 217 YSFS 220
F
Sbjct: 479 RFFP 482
>gi|282896498|ref|ZP_06304518.1| Probable competence protein [Raphidiopsis brookii D9]
gi|281198604|gb|EFA73485.1| Probable competence protein [Raphidiopsis brookii D9]
Length = 779
Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 66/169 (39%), Gaps = 15/169 (8%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDN 143
++ + L+ F + +Y + NI+A P++S + I + ++ ++LS L
Sbjct: 403 LISVPLAATIWTLPLLLHIFSTVAIYSVPLNIIATPLISIISIGGMISGLVSLLLSDLGG 462
Query: 144 IPFGVMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVT---IVVEFLLMVFCKTNIRH 199
+ + I+I +A + N IG I + ++V L+ + +
Sbjct: 463 YVASFLYYPAHILIKMAEFFDHLPGNSLNIGSISIWQMLIIYGLIVATCLVPWWQKRWLL 522
Query: 200 IGSIMIGITIIILF----------TFPYSFSPDLLISEKGNLVALVDKN 238
G I + +I ++ + P L+I ++G + + +
Sbjct: 523 AGLIATILAVIPIWYYTSNLLKITLLATNSEPVLVIQDRGQVTLINSGD 571
>gi|269926772|ref|YP_003323395.1| ComEC/Rec2-related protein [Thermobaculum terrenum ATCC BAA-798]
gi|269790432|gb|ACZ42573.1| ComEC/Rec2-related protein [Thermobaculum terrenum ATCC BAA-798]
Length = 469
Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 54/134 (40%), Gaps = 6/134 (4%)
Query: 68 WTWKKISSIKQSFLNEIRANIGTY--GSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W + ++ +R + AS LI +F + ++AN+L P++ +
Sbjct: 325 WLYPSVARAMARLPELLRETVSISFVAQASTMPLLIFYFGKVSHLAILANVLVAPLIP-L 383
Query: 126 VIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET-SFVT 182
+ ++ ++L +L SL + + + I++IA+ IS + I S V
Sbjct: 384 EMILTVLTVVLGVLSASLGSAIGWLTGKFVLAIVYIANSISEISAASELRLIVGPKSLVL 443
Query: 183 IVVEFLLMVFCKTN 196
+ F+ ++
Sbjct: 444 YYLVFVAVILLAQP 457
>gi|294341901|emb|CAZ90330.1| putative DNA internalization-related competence protein ComEC/Rec2
[Thiomonas sp. 3As]
Length = 871
Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 50/149 (33%), Gaps = 4/149 (2%)
Query: 30 AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIG 89
F +F + G+ + P+ + L A+
Sbjct: 419 VRQAGFWLSFVAV--GMLFVAGNRRHPETAALACGPGEAAPAGRLQRGAQALRR-AAHSQ 475
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM 149
+ + + F I V +AN LAIP+++ VV P + +LL LD + +
Sbjct: 476 WVATIALLPLTLLFFQQIAVLSPLANALAIPVVTLVVAPLAVGGLLL-PAPLDGWAWRLG 534
Query: 150 AWGLDIIIHIAHRISVAHNEFCIGRIPET 178
AW + + H+++ P+
Sbjct: 535 AWVQQGLDAVLHQMADWPLAQWHAAAPDG 563
>gi|332529423|ref|ZP_08405383.1| DNA internalization-related competence protein ComEC/Rec2
[Hylemonella gracilis ATCC 19624]
gi|332041139|gb|EGI77505.1| DNA internalization-related competence protein ComEC/Rec2
[Hylemonella gracilis ATCC 19624]
Length = 674
Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLM----ILSLDNIPFGVMAWGLDIIIHI 159
F + + L+AN++AIP ++ VV P L+ L + +L+ + AW + + +
Sbjct: 559 FGQMSLVSLLANLVAIPWVTLVVTPLALLGSLGVVAEPLLAYSAPLWDAAAWAVQALNTV 618
Query: 160 -AHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
A ++ + + + P V LL+V
Sbjct: 619 LASMAALPLATYSVPQAPLWMAWAGVAGGLLLVL 652
>gi|114567114|ref|YP_754268.1| DNA internalization-related competence protein ComEC/Rec2
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|114338049|gb|ABI68897.1| DNA internalization-related competence protein ComEC/Rec2
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 761
Score = 45.6 bits (106), Expect = 0.014, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 35/99 (35%), Gaps = 5/99 (5%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM---ILSLDNI 144
I + HF+ L++N+L + VI GL+A++L L I
Sbjct: 361 IPLSAQLAVLPLTAYHFNLFSPVSLLSNVLTSYLSGACVI-LGLLALMLATIWPW-LAGI 418
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
+ +++I+ + + F P + +
Sbjct: 419 FLFPAGFFIELIMGLNSAVLKLPLAFWWVATPHFILIIV 457
>gi|317479721|ref|ZP_07938843.1| competence protein [Bacteroides sp. 4_1_36]
gi|316904091|gb|EFV25923.1| competence protein [Bacteroides sp. 4_1_36]
Length = 678
Score = 45.6 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 68/184 (36%), Gaps = 17/184 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + ++AI + +Y+ WK + + + +
Sbjct: 336 LFDVGFQLSFSAVAAIVL---VQPKLYA-------LWKVDNRFLRYLWGLM--TVSVAAQ 383
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWG 152
+ +I +F + L+ N+ IP++S V+ + + ++L L ++ V+
Sbjct: 384 LGTAPLVIFYFSRFSTHFLLTNLWVIPMVSLVLY-SAVFLLMLTPLPFVQHLFARVVEAL 442
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV---FCKTNIRHIGSIMIGITI 209
+ + + I + V +V FL M F + +R + ++ +
Sbjct: 443 VHVQNEVLRWIEHLPGAAVDDIWLDIWGVLLVYLFLGMAYYGFLRLTVRRVCFALLALLA 502
Query: 210 IILF 213
++ +
Sbjct: 503 VVSW 506
>gi|315608002|ref|ZP_07882995.1| competence protein ComEC [Prevotella buccae ATCC 33574]
gi|315250471|gb|EFU30467.1| competence protein ComEC [Prevotella buccae ATCC 33574]
Length = 451
Score = 45.6 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 55/170 (32%), Gaps = 21/170 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + + I FY + W I + I A + T
Sbjct: 289 LFDVGFQLSFVAVLGIKLFY------LPFAHSFHFRWWLPDRILRLCAISISAQLTTM-- 340
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +F Y L+ N++ IP+ + ++ ++ + L F V+ L
Sbjct: 341 ----PLTLYYFGRFSSYFLLTNVVVIPLATLLIY-GVVLLMFLSPF---PPVFQVVREAL 392
Query: 154 DIII-----HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR 198
+++ ++ S+ V + V L ++ IR
Sbjct: 393 LLLVEKMVGAVSWIASLPGASIGDIHFNRVQVVLLYVAMLSLLLAIGRIR 442
>gi|150026364|ref|YP_001297190.1| hypothetical protein FP2334 [Flavobacterium psychrophilum JIP02/86]
gi|149772905|emb|CAL44389.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
Length = 677
Score = 45.6 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 33/225 (14%), Positives = 75/225 (33%), Gaps = 29/225 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F ++ + + I + WK S + F + I +
Sbjct: 356 GFQLSYIALF--------------FILWLQPMLKILWKPKSELVAYFWDII--TVSFAAQ 399
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-GVMAWG 152
A I +FH P + N++ IP L V++ G++ ++L + +A
Sbjct: 400 IGAMPLSIYYFHQFPGLFFVTNLVLIPCL-MVIMAIGVLLMILAYFDFVPVLLSKTVALS 458
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM--VFCKTNIRH------IGSIM 204
+ + I+ F I IP ++ I ++ + +GSI+
Sbjct: 459 ITFTNTYINWIASIE-TFVIKNIPLNFWLLIASYLVIFSCIIWFKKPNFTKIILALGSIL 517
Query: 205 IGITIIILFTFPYSFSPDLLI--SEKGNLVALVDKNTLISNYSNP 247
I + + + +L++ + K ++ ++ +N
Sbjct: 518 IFQILFVTTNWQSEIKKELIVFNARKSTIIGKRIGKKIMLYTNNG 562
>gi|315303227|ref|ZP_07873877.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
ivanovii FSL F6-596]
gi|313628409|gb|EFR96892.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
ivanovii FSL F6-596]
Length = 566
Score = 45.6 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+ + I Q L+ A I + +ASI ++ HF+ G+ N+L IPI + +++
Sbjct: 153 LSSQGILMKLQHPLSRSLA-ISFVSTITASIVMMYHFYSFSWVGIFFNLLYIPIFTIIIL 211
Query: 128 PAGLIAILL 136
P + +LL
Sbjct: 212 PGCFLVLLL 220
>gi|313123471|ref|YP_004033730.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312280034|gb|ADQ60753.1| Metallo-beta-lactamase superfamily hydrolase [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 728
Score = 45.6 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 53/123 (43%), Gaps = 8/123 (6%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ FL+ F+ + V + N+L +P +++V+P +A+L L ++ ++
Sbjct: 344 TPFLLYFFYQVNVCTIFYNVLVVPYFNYIVMPMTGLALLAPP-GLAAFFEKILEAAEGML 402
Query: 157 IHIAHRISVAHNEFCIGRIPETSF-VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
++A + G++ + V+ FL ++ T + I+ + ++I +
Sbjct: 403 ANVAKT---GFGQLIYGQVKAWQLALLFVLTFLYLI---TRKKKYRHILAAVYLLIFVSI 456
Query: 216 PYS 218
+
Sbjct: 457 HFP 459
>gi|254445045|ref|ZP_05058521.1| Competence protein [Verrucomicrobiae bacterium DG1235]
gi|198259353|gb|EDY83661.1| Competence protein [Verrucomicrobiae bacterium DG1235]
Length = 544
Score = 45.6 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
+ S+++ I +F +P YG++ N++A+PI S ++ AG +++LL L+
Sbjct: 403 TGVSIAAFLSSALLGIYYFQILPTYGILINLVALPIASLAIV-AGFLSLLLSPLNTILPI 461
Query: 146 FGVMAWGLDIIIHIAHRI-----SVAHNEFCIGRIPETSFVTIVVEFLLMV 191
+ ++I + H ++ + IP + T ++ L +V
Sbjct: 462 SELFNNAALVLIKLIHLTLEFTSTLPASSIATAPIPASLAATAILSSLALV 512
>gi|255011311|ref|ZP_05283437.1| putative competence related membrane protein [Bacteroides fragilis
3_1_12]
gi|313149121|ref|ZP_07811314.1| competence protein [Bacteroides fragilis 3_1_12]
gi|313137888|gb|EFR55248.1| competence protein [Bacteroides fragilis 3_1_12]
Length = 672
Score = 45.6 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 23/195 (11%), Positives = 68/195 (34%), Gaps = 21/195 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + ++AI Y P++ + + + + ++
Sbjct: 330 LFDVGFQLSFSAVTAILLIY--PRLFR--------LLPIGNGVLKKVWALMCVSLAAQIG 379
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWG 152
+ ++ +F + L+ N+L IP++S V++ + +I +++ L + +
Sbjct: 380 --TAPLVLLYFSRFSTHFLLTNLLVIPLVS-VIMYSAVILLVVSPFSQLYTWCAVAVKFL 436
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+D++ + I + + L+ + + + + + +L
Sbjct: 437 IDLLNAAVRWVEHLPLA-SIDNVWIYPAEVLAFYLALLACMRHMMVRSAKSLYLVGVCLL 495
Query: 213 ------FTFPYSFSP 221
+ + + P
Sbjct: 496 VTGSLHWAWRMADRP 510
Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 38/213 (17%), Positives = 70/213 (32%), Gaps = 19/213 (8%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ +AR+SPPS P FD+ Y+GI + + I ++ +
Sbjct: 126 GDELVLMARVSPPSNNGNPDEFDYARYLRYRGIGGVAFVAEGKWQIIGHRMSRSFRQIAL 185
Query: 74 SSIKQSFLNEIRANIGTYGSAS--ASIFLIKH-------FHCIPVYGLIANILAIPILSF 124
+ L++ RA + A++ + V G +++LA+ L
Sbjct: 186 D-CRDRILDKYRALKFEPDEFAVLAALTVGYKEELGEDIRETYSVSGA-SHVLALSGLH- 242
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV 184
I L M+L L WG+ + I ++ F G P I+
Sbjct: 243 -------IGFLYMLLLLLLKWLPGNVWGVRLFRAIVIITALWGFAFITGLSPSVVRSVIM 295
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
L + + + I+L P+
Sbjct: 296 FSLLALSVLSGRTGISLNTLALTAFIMLAVHPF 328
>gi|90579510|ref|ZP_01235319.1| hypothetical Rec2-related protein [Vibrio angustum S14]
gi|90439084|gb|EAS64266.1| hypothetical Rec2-related protein [Vibrio angustum S14]
Length = 769
Score = 45.6 bits (106), Expect = 0.015, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 75/175 (42%), Gaps = 8/175 (4%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHR 162
F I + IANI+A+P++S + +P L+A+L + ++ ++ + W L I+
Sbjct: 400 FGGISLAAPIANIVAVPLVSTITVPLVLLALLTLWFPAISSLFWQCADWSLIPIVEGIQW 459
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
+ A + P + IV M+ ++ + + S ++ IT+ P
Sbjct: 460 LEGAWYPLSVHLTPLLWGIVIVF-VAWMLLPLSSFKWLYSSVVVITLCWFINEPVKSHWK 518
Query: 223 LLISEKGNLVAL-VDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQE 276
+L+ + G+ +A+ + KN Y W+ + P +++ +++
Sbjct: 519 MLVIDVGHGLAVLIIKNNKAVLYDTGNR-----WEDRAVAETTILPILEQLGIKQ 568
>gi|304403908|ref|ZP_07385570.1| DNA internalization-related competence protein ComEC/Rec2
[Paenibacillus curdlanolyticus YK9]
gi|304346886|gb|EFM12718.1| DNA internalization-related competence protein ComEC/Rec2
[Paenibacillus curdlanolyticus YK9]
Length = 918
Score = 45.6 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 17/104 (16%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F I + + W++ + + I A I ++
Sbjct: 366 GFQLSFIVTAGLIVGV-----------APVRALMPKWRRGKMLLDAIAVTIVAQIVSF-- 412
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
I +F+ L AN + +P +SF+V+P G ++ +
Sbjct: 413 ----PVSIYYFNQWNPLSLPANFVLVPFISFIVMPLGAASLTAL 452
>gi|260582021|ref|ZP_05849816.1| recombination protein 2 [Haemophilus influenzae NT127]
gi|260094911|gb|EEW78804.1| recombination protein 2 [Haemophilus influenzae NT127]
Length = 788
Score = 45.6 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ + F+ + + G +AN++A+P+ SF ++P L A+ + I +A L +
Sbjct: 382 TPLQLFLFNGLSLSGFLANLIAVPLYSFFLVPLILFAV----FTNGAIFSWQLANKLAEV 437
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL-MVFCK 194
I ISV + F+T + + ++ +
Sbjct: 438 --ITGLISVFQGNWLTVSFNLALFLTALCGGIFMLIIWR 474
>gi|34581022|ref|ZP_00142502.1| hypothetical protein [Rickettsia sibirica 246]
gi|28262407|gb|EAA25911.1| unknown [Rickettsia sibirica 246]
Length = 82
Score = 45.6 bits (106), Expect = 0.016, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 20 IARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH-NTWTWKKISSIKQ 78
+A+L P P +DF F +Y I A Y S P++I +E++ +++T++ S I
Sbjct: 2 LAKLYKPQNSILPEGYDFGFYAYLSDIGANDYAMSEPQIIERNETNFDSFTYRVRSYIYN 61
Query: 79 SFLNEIRANIGT 90
+ + +I+ +
Sbjct: 62 NLIEKIKGILQL 73
>gi|301164632|emb|CBW24191.1| putative competence related membrane protein [Bacteroides fragilis
638R]
Length = 699
Score = 45.2 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 63/161 (39%), Gaps = 19/161 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA--NIGTY 91
LFD F + ++AI Y W ++++ + S L ++ A ++
Sbjct: 357 LFDVGFQLSFSAVAAILLLY-------------PWLFRQLP-VGNSLLKKVWALMSVSLA 402
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW 151
+ ++ +F P + L+ N+L IP++S ++ A + ++L S+ V+
Sbjct: 403 AQIGTAPLVLLYFSRFPTHFLLTNLLVIPLVS-GIMYATVALLVLTPFSMLYTGCSVVVR 461
Query: 152 GL-DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
L D + + + I R+ +L++
Sbjct: 462 SLVDWLNTMVRWVEHLPLA-SIDRVWIYPTEAFAFYLVLLI 501
Score = 44.0 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 73/225 (32%), Gaps = 33/225 (14%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
+ + + A +SPPS P FD+ YKGIS I + +S +
Sbjct: 148 EGLRSGDELIFFAHVSPPSNNGNPDEFDYARYLRYKGISGIAF--------VASGNWKIT 199
Query: 69 TWKKISSIKQSFLN---------EIRANIGTYGSASASIFLIKH-------FHCIPVYGL 112
++ S +Q L + A++ + V G
Sbjct: 200 GYRFSRSCRQIALEYRDRILDQYRALKFNPDEFAVLAALTVGYKEELSEDIRETYSVSGA 259
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI 172
+++LA+ L G + ++L+ L +P +G+ + + ++ F
Sbjct: 260 -SHVLALSGLHI-----GFLYMMLLFF-LKWLPGNA--FGVRLFRAVVIITALWGFAFFT 310
Query: 173 GRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
G P I+ L + + + I+L P+
Sbjct: 311 GLSPSVVRSVIMFSLLALSVLSRRTGISLNTLALTACIMLVVHPF 355
>gi|126667252|ref|ZP_01738225.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Marinobacter sp. ELB17]
gi|126628197|gb|EAZ98821.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Marinobacter sp. ELB17]
Length = 831
Score = 45.2 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 58/160 (36%), Gaps = 4/160 (2%)
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + + Q L + A + + L+ P+ G +AN+ AIP
Sbjct: 385 AVAVLILVFSGRLGVVQGVLALVLAQTAMFAGLWPGLLLLG--QNQPLAGFVANLFAIPW 442
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+S VV+P L LL+ L + + + LD ++ I + + I
Sbjct: 443 VSMVVMPLLLCGALLVALVPASSVWVTLL--LDTVLGILWQGLQWLGGWDSPTIQLGVAA 500
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
I + ++++ R + + + L + +P
Sbjct: 501 AIGLAAVVLLALWYPQRGFRLALAVLLGLWLVSHGRFQAP 540
>gi|314918450|gb|EFS82281.1| ComEC/Rec2-related protein [Propionibacterium acnes HL050PA1]
Length = 539
Score = 45.2 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 23/179 (12%), Positives = 58/179 (32%), Gaps = 9/179 (5%)
Query: 46 ISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFH 105
+ ++G++ S+ W+ ++ + + + +
Sbjct: 326 VGSVGFWLSVCATAGILWWAQPWS---VAMEWAPAWLAVGVTVPWAAQVTTQPVITWMAG 382
Query: 106 CIPVYGLIANILAIPIL---SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
+ GL+AN+ A P + S + + GL+A + + L + + W + II IAH
Sbjct: 383 TVSTTGLVANLAAAPFVPPASTLGMVTGLLAFIWLPLGM--PFGRLAGWCVQPIIWIAHF 440
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ A + + + + + T + + + + P
Sbjct: 441 GAKAPSGLIRWPAGGWALGVL-AGLCMGLALITPTVLAKPWLTALAGLAVIAAMVVRPP 498
>gi|295086558|emb|CBK68081.1| Competence protein. [Bacteroides xylanisolvens XB1A]
Length = 372
Score = 45.2 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 52/145 (35%), Gaps = 13/145 (8%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
++ + ++ +F V+ L+ N++ IP+++ ++ A + +LL +
Sbjct: 71 SVSIAAQIGTAPLVLFYFSRFSVHFLLTNLVVIPLITIILY-AAVAMLLLTPF--SWLQI 127
Query: 147 GVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF-------VTIVVEFLLMVFCKTNIRH 199
GV G+ ++ + + I + IV+ L F R+
Sbjct: 128 GVAG-GVKKLLEGLNFFVRWVEQLPCASIDGIWLYQSEVLGIYIVIALLTYYFMNRRYRN 186
Query: 200 IGSIMIGITIIIL--FTFPYSFSPD 222
+ + I ++ T + P
Sbjct: 187 LQICLFSILLMGTYHATLYWLDRPQ 211
>gi|255745361|ref|ZP_05419310.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio cholera CIRS 101]
gi|262153536|ref|ZP_06028665.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio cholerae INDRE 91/1]
gi|262167436|ref|ZP_06035143.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio cholerae RC27]
gi|255737191|gb|EET92587.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio cholera CIRS 101]
gi|262024133|gb|EEY42827.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio cholerae RC27]
gi|262030663|gb|EEY49298.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio cholerae INDRE 91/1]
Length = 709
Score = 45.2 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 25/205 (12%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-----SLDNIPFGVMAW 151
+ F + V ++ N++ IP S V++PA + +LLM++ +
Sbjct: 333 APVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVVWPSVAAAYWPWVDWTFL 392
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
LD + A G + + + ++ F+ + C + + +I
Sbjct: 393 PLDWALQFADVGWWVVPSKVQGVVAASVAILLLYRFMSLKACS----------LLLGMIG 442
Query: 212 LFTFPYSFSP----DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
L+ + S +P D+L G L +++++ Y S W P
Sbjct: 443 LWWWFPSLTPLWRMDVLDVGHG-LAIVIEQDERAIVYDTGSS-----WPGGSYVQSVIEP 496
Query: 268 HVQKEDLQEKNQSSLKEILRSMQPR 292
+Q+ L++ + L +
Sbjct: 497 MLQQRGLRQVDGVILSHLDNDHAGD 521
>gi|325684380|gb|EGD26549.1| ComE operon protein 3 [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 728
Score = 45.2 bits (105), Expect = 0.018, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 53/123 (43%), Gaps = 8/123 (6%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ FL+ F+ + V + N+L +P +++V+P +A+L L ++ ++
Sbjct: 344 TPFLLYFFYQVNVCTIFYNVLVVPYFNYIVMPMTGLALLAPP-GLAAFFEKILEAAEGML 402
Query: 157 IHIAHRISVAHNEFCIGRIPETSF-VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
++A + G++ + V+ FL ++ T + I+ + ++I +
Sbjct: 403 ANVAKT---GFGQLIYGQVKAWQLALLFVLTFLYLI---TRKKKYRHILAAVYLLIFVSI 456
Query: 216 PYS 218
+
Sbjct: 457 HFP 459
>gi|308177475|ref|YP_003916881.1| competence protein [Arthrobacter arilaitensis Re117]
gi|307744938|emb|CBT75910.1| putative competence protein [Arthrobacter arilaitensis Re117]
Length = 755
Score = 45.2 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 26/211 (12%), Positives = 60/211 (28%), Gaps = 33/211 (15%)
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHF----------HCIPVYGLIANILAIPI 121
I + + + + + + +I F +Y L N+L P+
Sbjct: 332 GIIMLAPALTEILAQFLPSCLAQLTAICCAAQFTCLPVIIALNSNFSLYSLPTNLLVAPL 391
Query: 122 LSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
L + + +L L + V + I +AH S
Sbjct: 392 LPLITSVGMVCLLLCTPLPGFSGVLIWVPGLLAEAIGKVAHFASGLPGAARPWPEGLGGI 451
Query: 181 VTIVVEFLLMVFC--------KTNIRHIGSIMIGITIIILFT--------FPYSFSPDLL 224
+ V+ +++ K +R + ++G ++ + + P
Sbjct: 452 ILAVMLAVVLCTLLIVGRETEKLRVRQVALGVLGAILVCVLALVLPATLFYREKVPPQWS 511
Query: 225 IS------EKGNLVALVDKNTLISNYSNPPS 249
I+ ++ L D + + P S
Sbjct: 512 IAMCDVGQGDAFVINLGDARGWLIDTGPPES 542
>gi|56963413|ref|YP_175144.1| late competence protein ComEC [Bacillus clausii KSM-K16]
gi|56909656|dbj|BAD64183.1| late competence protein ComEC [Bacillus clausii KSM-K16]
Length = 768
Score = 45.2 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 50/134 (37%), Gaps = 7/134 (5%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
+ T + + HF+ + L+ N++ IP++SF+V+P ++++ + + +
Sbjct: 361 TVTTIAQFAGLPLIFFHFYEWSPFSLLLNLVYIPLVSFIVLPFSFLSLIAFVWLPEQVNL 420
Query: 147 GVMAWGLDIIIHIAHRISVAHNEFCIGRI---PETSFVTIVVEFLLMVF--CKTNIRHIG 201
+ L+ ++ H + +E + P V + L F + +
Sbjct: 421 FI-GL-LESLLTFVHPTLLKLSESTFQLVLGKPPVWLVVAMYGALAFAFVHWQEQKWPLP 478
Query: 202 SIMIGITIIILFTF 215
+ ++
Sbjct: 479 IAFLPFVACLIVGA 492
>gi|293396769|ref|ZP_06641045.1| recombination protein 2 [Serratia odorifera DSM 4582]
gi|291421033|gb|EFE94286.1| recombination protein 2 [Serratia odorifera DSM 4582]
Length = 751
Score = 45.2 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 41/250 (16%), Positives = 82/250 (32%), Gaps = 41/250 (16%)
Query: 38 NFSSYYKGISAIGYFYS---IPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
+F ++A+ +++ +P+ ++ W I L ++ +
Sbjct: 327 SFWLSALAVAALIFWFEWAPLPRRFSAAWYWAPLRWLHIQLGMTLLLLPMQFGL------ 380
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL--MILSLDNIPFGVMAWG 152
FH + L AN+ A+PI+S + +P L A++L + + L +
Sbjct: 381 ---------FHGVSWTSLPANLWAVPIVSLLSVPLILTAVVLNNVPM-LGEYLWLAANQT 430
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
L + + E RI V+ +L + S G + L
Sbjct: 431 LVWALW-----PLPWLEQGWVRISSGLMQFSVLGWLSVAAW--RFGWWRSYPTGCAALFL 483
Query: 213 FTFPYSFSP-------DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHE 265
+ P D+L G L +V++N Y + W +
Sbjct: 484 IFLVWRERPPEHRWRLDMLDVGHG-LAVVVERNGKAIMYDSGNR-----WNTGSAAQRII 537
Query: 266 APHVQKEDLQ 275
P+++ LQ
Sbjct: 538 LPYLRWRGLQ 547
>gi|326791211|ref|YP_004309032.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium lentocellum DSM 5427]
gi|326541975|gb|ADZ83834.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium lentocellum DSM 5427]
Length = 777
Score = 45.2 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 10/99 (10%)
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
HF+ +P + N + IP+ S ++I G LLM L D ++A + +++ +
Sbjct: 388 YHFYQVPFLSSLLNFIVIPLFSLIMI--GGWGCLLMGL-FDWPLGYLLASVISLLLQVIS 444
Query: 162 R-----ISVAHNEFCIGRIPETSFVT--IVVEFLLMVFC 193
+SV + C+GR + IV+ L
Sbjct: 445 FMVRLVLSVPLSTICVGRPSGIELLLYIIVIGLFLYGVW 483
>gi|86143862|ref|ZP_01062230.1| competence protein [Leeuwenhoekiella blandensis MED217]
gi|85829569|gb|EAQ48032.1| competence protein [Leeuwenhoekiella blandensis MED217]
Length = 678
Score = 45.2 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 35/201 (17%), Positives = 74/201 (36%), Gaps = 26/201 (12%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESH-NTWTWKKISSIKQSFLNEIRANIGTYGS 93
++ F Y + AI + Y + +++ ++ + W+ I+ I A +G
Sbjct: 355 YEVGFQLSYAAVFAIMWLYPKLEPLWNPKNKILRYYWQLIAV-------SISAQLGVL-- 405
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +FH P LIANI+ +P L F++I GLI ++L + +P + ++
Sbjct: 406 ----PLSLYYFHQFPGLFLIANIVVLPALGFLLI-YGLILLMLAAAGI--LPEFIASFYN 458
Query: 154 DIIIHIAHRISVAHNEFCIGR----IPETSFVTIVVEFLLMVFCKTNIRHIGS-----IM 204
++ + +S + + + MV I ++
Sbjct: 459 TLLNTLNQFVSTLAQFDALLFKNIYFSIPLVILSYLLLFFMVQLAQKKNFINLVGSLTVL 518
Query: 205 IGITIIILFTFPYSFSPDLLI 225
I + + +P L I
Sbjct: 519 IAFPLSLALIEYNQATPALYI 539
>gi|325578732|ref|ZP_08148779.1| competence protein EC [Haemophilus parainfluenzae ATCC 33392]
gi|325159556|gb|EGC71688.1| competence protein EC [Haemophilus parainfluenzae ATCC 33392]
Length = 800
Score = 45.2 bits (105), Expect = 0.019, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 4/134 (2%)
Query: 59 IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILA 118
Y S W +K+S + L +G + + F+ + G +AN++A
Sbjct: 354 RYVPLSIIEWQHQKLSRKVRWILGLFHLQLGLLILFT--PIQLFFFNGFALNGFLANLIA 411
Query: 119 IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
+P+ SF+++P L A+L +A G+ + I S + I T
Sbjct: 412 VPLYSFLLVPLILFAVLTNGAFSSWHLSNTIAQGITQFLSIFQG-SYVPISINLSLI-LT 469
Query: 179 SFVTIVVEFLLMVF 192
+ +++V +L
Sbjct: 470 ALLSLVFGGMLYGL 483
>gi|89895893|ref|YP_519380.1| hypothetical protein DSY3147 [Desulfitobacterium hafniense Y51]
gi|89335341|dbj|BAE84936.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 836
Score = 45.2 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 34/227 (14%), Positives = 74/227 (32%), Gaps = 37/227 (16%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + + + ++ + +W SIK +F A T
Sbjct: 312 GFQLSFMATWGIL-----------VLSADLEKMSWVRDWPKSIKNAFSMTCAAQAATLPL 360
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
++ FH + + G++AN+LA+ +L + G++A+ L + I + L
Sbjct: 361 MISA------FHRLSIIGVLANLLALFVLGS-IFELGILAVFLSF--IPQIALPLFQVSL 411
Query: 154 DIIIHIAHR---ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITII 210
++ ++ ++ P F + +V + I +G+ +
Sbjct: 412 WLLTGVSEFLMQLARIPWADVWVVNPGPLFWVYWYGW-FLVLLVGKEKVGFMIRMGLGNL 470
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKS 257
P+ V L+ + P S +W S
Sbjct: 471 YRVGQPWI----------ARGVVLMRPLGAALQKAMPQS---ERWWS 504
>gi|237808980|ref|YP_002893420.1| DNA internalization-related competence protein ComEC/Rec2
[Tolumonas auensis DSM 9187]
gi|237501241|gb|ACQ93834.1| DNA internalization-related competence protein ComEC/Rec2
[Tolumonas auensis DSM 9187]
Length = 738
Score = 45.2 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 37/93 (39%), Gaps = 4/93 (4%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAH 161
F + + ++ N+ A P +F ++P LI+ LL+ + SL I F + LD ++
Sbjct: 360 FDGLSISSVLVNLPAGPWFTFSIVPVALISGLLVPIFPSLAYIGFWLCDLQLDWLMSALE 419
Query: 162 RISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
I + + + + + +
Sbjct: 420 WIQTWGSGWMAISFRQQLLLFWALAGWF--IWR 450
Score = 40.2 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 69/199 (34%), Gaps = 9/199 (4%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+ ARL P G P F+ +G++A G S + + S K
Sbjct: 119 GDKLHIRARLKIPHGLGNPAGFNAERWLLGQGVTATGSISSFKLLYQADSSWRDNWLMKS 178
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
+ Q F YG + GLI +++AI + +I I
Sbjct: 179 RQLMQKFRQPELLMALIYGEQQDVDKADW--QTLRDTGLI-HLIAISGMHIGLIAW--IG 233
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
+ L L L + GL ++ IA ++ ++ P + +++ ++ +
Sbjct: 234 MALSRLLLQRWSEKLP--GLHWLVGIA--FALLYSALADFSAPTVRALCMLIIWIALRLW 289
Query: 194 KTNIRHIGSIMIGITIIIL 212
+ I + + I+++
Sbjct: 290 QREWSGIRIWLFALAIMLV 308
>gi|153807348|ref|ZP_01960016.1| hypothetical protein BACCAC_01626 [Bacteroides caccae ATCC 43185]
gi|149129710|gb|EDM20922.1| hypothetical protein BACCAC_01626 [Bacteroides caccae ATCC 43185]
Length = 529
Score = 45.2 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 56/157 (35%), Gaps = 16/157 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + +++I Y + + S I + F + ++
Sbjct: 187 LFDVGFQLSFLAVASILLTYKPIYRLLPVK----------SRIGRYFWGLM--SVSIAAQ 234
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ ++ +F + L N++ IP+++ ++ + ++ +LL L +A G+
Sbjct: 235 LGTAPLVMFYFSRFSTHFLFTNLVVIPLVTIILY-SAVVMLLLTPLH---WIQNFIAEGV 290
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
++ + + I + V L +
Sbjct: 291 KFLLDALNTFIHWVEQLPYASIDGIWLYQLEVLGLYL 327
>gi|17545839|ref|NP_519241.1| transporter DNA uptake transmembrane protein [Ralstonia
solanacearum GMI1000]
gi|17428133|emb|CAD14822.1| hypothetical transmembrane protein [Ralstonia solanacearum GMI1000]
Length = 847
Score = 45.2 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 21/185 (11%), Positives = 52/185 (28%), Gaps = 10/185 (5%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+F + A + + + W+ + + + +
Sbjct: 386 LSFGAVAVIFLAARIVAADARDDVRRPAWPVRAWRGLRGAAR---------VQLAVTFGL 436
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ F + V +AN LAIP++SFV P L+ L +
Sbjct: 437 LPLTLLLFQQVSVVSAVANALAIPVVSFVTTPLALMGTAL-PEPWSQPVLIWAEASFAWL 495
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+ +++ + + V + ++ R G +++
Sbjct: 496 MPWLDALALPGGSVWVAPAAPAWAWGLAVVGVPLLLVPGGYRAWAWRAQGAVLLLPMLLA 555
Query: 217 YSFSP 221
+ +P
Sbjct: 556 RAPAP 560
>gi|145636733|ref|ZP_01792399.1| DNA mismatch repair protein [Haemophilus influenzae PittHH]
gi|145270031|gb|EDK09968.1| DNA mismatch repair protein [Haemophilus influenzae PittHH]
Length = 788
Score = 45.2 bits (105), Expect = 0.020, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 47/127 (37%), Gaps = 7/127 (5%)
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
W + S + L+ ++ + + F+ + + G +AN++A+PI SF+++
Sbjct: 355 WKNRPFSPKVRWILSLF--HLQFGLLLFFTPLQLFLFNGLSLSGFLANLMAVPIYSFLLV 412
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF 187
P L A+ +A G+ +I + + + +
Sbjct: 413 PLILFAVFTNGTMFSWQLANKLAEGITGLISVFQGNWL-----TVSFNLALFLTALCAGI 467
Query: 188 LLMVFCK 194
+++ +
Sbjct: 468 FMLIIWR 474
>gi|297626066|ref|YP_003687829.1| ComE operon protein 3 [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296921831|emb|CBL56391.1| ComE operon protein 3 [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 773
Score = 45.2 bits (105), Expect = 0.021, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 56/174 (32%), Gaps = 5/174 (2%)
Query: 50 GYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV 109
G+ S W + + + + + I V
Sbjct: 335 GFALSATATAGILWWAGPWQARMRRWAPGWLAESLC--VPAAAQLATQPLITILSGEISV 392
Query: 110 YGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHN 168
GL AN+ A P + V + + A++ +L L + + + II IAH + A
Sbjct: 393 VGLGANMAAAPFVGPVTVLGLVAALISPVLGPLAQVMGWLAGCCVQPIILIAHLAASAPM 452
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTNI--RHIGSIMIGITIIILFTFPYSFS 220
+ S +++ L++ + R +G + + ++I +
Sbjct: 453 ATMTWPVSPGSITLLIIFCLMIALILGRLVGRRLGCLALAGVMVIACLWRPPLP 506
>gi|145633377|ref|ZP_01789107.1| DNA mismatch repair protein [Haemophilus influenzae 3655]
gi|145635246|ref|ZP_01790950.1| recombination protein 2 [Haemophilus influenzae PittAA]
gi|229845399|ref|ZP_04465530.1| recombination protein 2 [Haemophilus influenzae 6P18H1]
gi|144985940|gb|EDJ92542.1| DNA mismatch repair protein [Haemophilus influenzae 3655]
gi|145267525|gb|EDK07525.1| recombination protein 2 [Haemophilus influenzae PittAA]
gi|229811707|gb|EEP47405.1| recombination protein 2 [Haemophilus influenzae 6P18H1]
Length = 788
Score = 44.8 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 47/127 (37%), Gaps = 7/127 (5%)
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
W + S + L+ ++ + + F+ + + G +AN++A+PI SF+++
Sbjct: 355 WKNRPFSPKVRWILSLF--HLQFGLLLFFTPLQLFLFNGLSLSGFLANLMAVPIYSFLLV 412
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF 187
P L A+ +A G+ +I + + + +
Sbjct: 413 PLILFAVFTNGTMFSWQLANKLAEGITGLISVFQGNWL-----TVSFNLALFLTALCAGI 467
Query: 188 LLMVFCK 194
+++ +
Sbjct: 468 FMLIIWR 474
>gi|213162301|ref|ZP_03348011.1| hypothetical protein Salmoneentericaenterica_20828 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
Length = 439
Score = 44.8 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 65/185 (35%), Gaps = 22/185 (11%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 65 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 124
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLL--MVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+ ++ I + + + + + +T + + ++L ++P
Sbjct: 125 N--ALPQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTW------PAVCLCGLLLMSWPLW 176
Query: 219 FSPDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKED 273
I+ G V ++D L I W P ++ +
Sbjct: 177 RP----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHN 232
Query: 274 LQEKN 278
L +
Sbjct: 233 LTPEG 237
>gi|67458413|ref|YP_246037.1| ComEC/Rec2-related protein [Rickettsia felis URRWXCal2]
gi|67003946|gb|AAY60872.1| ComEC/Rec2-related protein [Rickettsia felis URRWXCal2]
Length = 300
Score = 44.8 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMI 59
I +A+L P PG +DF F +Y I A GY S P++I
Sbjct: 163 IRVNDRITLLAKLYKPQNAILPGGYDFGFYAY---IGANGYAMSQPQII 208
>gi|88803621|ref|ZP_01119146.1| competence protein [Polaribacter irgensii 23-P]
gi|88780633|gb|EAR11813.1| competence protein [Polaribacter irgensii 23-P]
Length = 646
Score = 44.8 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 76/179 (42%), Gaps = 19/179 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F Y ++ G + PK++ ++ + I I + I +I
Sbjct: 317 LFDVGFQLSY--LAVFGIVWLQPKLVV------LYSPRFI--ISRKIWQLITVSIAAQAG 366
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG- 152
I +FH P +++N++ IP L F+++ G++ ++L +L L V+ G
Sbjct: 367 IL--PLSIYYFHQFPGLFIVSNVVIIPFLGFILM-GGIVVVVLSLLQLLPSFLVVIYGGL 423
Query: 153 LDIIIHIAHRISVAHN----EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
+ ++ + IS+ + + I + F ++ +L + K R +G ++ I
Sbjct: 424 ISLMNGFVNWISLQESFLFKDLGISFLMLLVFYGLLFTGVLFLIKKNTWR-LGCFLLAI 481
>gi|254416319|ref|ZP_05030073.1| hypothetical protein MC7420_5155 [Microcoleus chthonoplastes PCC
7420]
gi|196177001|gb|EDX72011.1| hypothetical protein MC7420_5155 [Microcoleus chthonoplastes PCC
7420]
Length = 455
Score = 44.8 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 32/212 (15%), Positives = 85/212 (40%), Gaps = 27/212 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + +G ++P ++ + + + I+ + L +
Sbjct: 40 GFQLSFLAT------LGLLVTVPPLVKNLDWLPSVIAALIAVPLAALLWTL--------- 84
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM--ILSLDNIPFGVMAW 151
+ F I Y ++ANI+ P++S + + L A++ + L+ I G++ +
Sbjct: 85 ----PLQLYVFGMIAPYSVVANIIGTPLISLISLGGFLSALVALISPLAGSAIA-GLLYY 139
Query: 152 GLDIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVF-CKTNIRHIGSIMIGITI 209
L ++ + + ++ + +G I + + + + +R I +I +TI
Sbjct: 140 PLQGLLELVRFLNALPASSVALGTISLMQLLLLYGLIGITCISSRVQMRGIFVGVIALTI 199
Query: 210 IILFTFPYS---FSPDLLISEKGNLVALVDKN 238
I L + F +L++++ ++ + D+
Sbjct: 200 IALPIWQTRLEQFQVTVLVADQEQVLVIQDQG 231
>gi|15613898|ref|NP_242201.1| late competence operon required for DNA binding and uptake
[Bacillus halodurans C-125]
gi|10173951|dbj|BAB05054.1| late competence operon required for DNA binding and uptake
[Bacillus halodurans C-125]
Length = 773
Score = 44.8 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 68/178 (38%), Gaps = 17/178 (9%)
Query: 51 YFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY 110
+ ++ + + + +I + L+ ++ + ++ HF +P+
Sbjct: 328 FQLGFQLSFLTTCALLLSSSTLLQAINRPLLSLVKVT--FLAQLISMPVILYHFFELPIL 385
Query: 111 GLIANILAIPILSFVVIPAG--LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH- 167
+ N+L +P++SFV++P + + LL+ + +P + L+II+ I H++ +
Sbjct: 386 SVPLNLLFVPVVSFVLLPLSFFVASSLLIHPGVAELPLFI----LEIIVPIVHQLLLVLN 441
Query: 168 ----NEFCIGRIPETSFVTIVVEFLLMVFCKTN----IRHIGSIMIGITIIILFTFPY 217
IG+ S +++ ++ ++ I PY
Sbjct: 442 EQSFAAVVIGKPSLNSVFLMMISLIIGWAWLERKEPFKAWGAFSVVLFLIAWQIYSPY 499
>gi|256822599|ref|YP_003146562.1| DNA internalization-like competence protein ComEC/Rec2 [Kangiella
koreensis DSM 16069]
gi|256796138|gb|ACV26794.1| DNA internalization-related competence protein ComEC/Rec2
[Kangiella koreensis DSM 16069]
Length = 780
Score = 44.8 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 28/56 (50%)
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
+ + +I + +F G+ NI+ IP+ S +++PA ++ LL + + +
Sbjct: 390 TLTLAIPSLLYFQQASFLGMFVNIIVIPVFSLIILPAIFLSFLLSLFGVAWPLSQI 445
>gi|60683120|ref|YP_213264.1| putative competence related membrane protein [Bacteroides fragilis
NCTC 9343]
gi|60494554|emb|CAH09353.1| putative competence related membrane protein [Bacteroides fragilis
NCTC 9343]
Length = 699
Score = 44.8 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 23/161 (14%), Positives = 63/161 (39%), Gaps = 23/161 (14%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA--NIGTY 91
LFD F + ++AI Y W ++++ + S L ++ A ++
Sbjct: 357 LFDVGFQLSFSAVAAILLLY-------------PWLFRQLP-VGNSLLKKVWALMSVSLA 402
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-----SLDNIPF 146
+ ++ +F P + L+ N+L IP++S ++ A + ++L +
Sbjct: 403 AQIGTAPLVLLYFSRFPTHFLLTNLLVIPLVS-GIMYATVALLVLTPFPMLYTGCSVVVR 461
Query: 147 GVMAWGLDIIIHIAHR-ISVAHNEFCIGRIPETSFVTIVVE 186
++ W ++ + H ++ + ++ +++
Sbjct: 462 SLVDWLNTMVRWVEHLPLASIDRVWIYPTEAFAFYLVLLIG 502
Score = 44.0 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 73/225 (32%), Gaps = 33/225 (14%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
+ + + A +SPPS P FD+ YKGIS I + +S +
Sbjct: 148 EGLRSGDELIFFAHVSPPSNNGNPDEFDYARYLRYKGISGIAF--------VASGNWKIT 199
Query: 69 TWKKISSIKQSFLN---------EIRANIGTYGSASASIFLIKH-------FHCIPVYGL 112
++ S +Q L + A++ + V G
Sbjct: 200 GYRFSRSCRQIALEYRDRILDQYRALKFNPDEFAVLAALTVGYKEELSEDIRETYSVSGA 259
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI 172
+++LA+ L G + ++L+ L +P +G+ + + ++ F
Sbjct: 260 -SHVLALSGLHI-----GFLYMMLLFF-LKWLPGNA--FGVRLFRAVVIITALWGFAFFT 310
Query: 173 GRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
G P I+ L + + + I+L P+
Sbjct: 311 GLSPSVVRSVIMFSLLALSVLSRRTGISLNTLALTACIMLVVHPF 355
>gi|229086896|ref|ZP_04219055.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock3-44]
gi|228696406|gb|EEL49232.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus Rock3-44]
Length = 722
Score = 44.8 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL---IAILLMILSLDNI 144
+ +++ L HF Y + N++ +P LS +V+P + + L + +
Sbjct: 309 LSIISQLASTPILFYHFGYFSPYSIFLNLIYVPFLSCIVLPCSIVIFLCALFVPFVSTWL 368
Query: 145 P 145
Sbjct: 369 A 369
>gi|255994725|ref|ZP_05427860.1| putative DNA internalization-related competence protein ComEC/Rec2
[Eubacterium saphenum ATCC 49989]
gi|255993438|gb|EEU03527.1| putative DNA internalization-related competence protein ComEC/Rec2
[Eubacterium saphenum ATCC 49989]
Length = 831
Score = 44.8 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 46/143 (32%), Gaps = 10/143 (6%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI---LSLDN 143
S+F F+ +G + N + + FVV+ G++ +L+M +
Sbjct: 399 GSLAGVQLGTSLFTQSVFNLFNPFGFLVNFPVVYLAGFVVV-GGMLLLLVMPLDVFVITK 457
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL------MVFCKTNI 197
+ + ++I + + P F+ I + K
Sbjct: 458 VITSFLHAVCKVLIAVNDWFYAGGRFSYVVPAPSMFFLIIYYGGIFFFSSEIFAVWKARK 517
Query: 198 RHIGSIMIGITIIILFTFPYSFS 220
R + + + I++ +F+
Sbjct: 518 RRKKIVAMVVCILMCALSMSTFT 540
>gi|146299185|ref|YP_001193776.1| ComEC/Rec2-related protein [Flavobacterium johnsoniae UW101]
gi|146153603|gb|ABQ04457.1| ComEC/Rec2-related protein [Flavobacterium johnsoniae UW101]
Length = 678
Score = 44.8 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 59/175 (33%), Gaps = 3/175 (1%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F Y+ Y I + WK + N + +
Sbjct: 347 FEPYFLFDVGFQLSYLALFFIVWLQPELNKIWKPKNKFILYIWNAL--TVSFAAQIGTLP 404
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
+ +FH P + NI+ +P+LSF++I ++ I + S I + + I+
Sbjct: 405 LCLYYFHQFPGLFFVTNIIILPVLSFIMIAGIIVMIFAIFKSPPEILVYIFEKSIFILNQ 464
Query: 159 IAHRISVAHNEFCIG-RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+ H ++ + G +T+ + + + I + I+II+
Sbjct: 465 LIHYVASFESFVIQGISFNFYYLITLYLVIISATIWSQKPSYNKLIAVFISIILF 519
>gi|282879464|ref|ZP_06288200.1| ComEC/Rec2-like protein [Prevotella buccalis ATCC 35310]
gi|281298412|gb|EFA90845.1| ComEC/Rec2-like protein [Prevotella buccalis ATCC 35310]
Length = 514
Score = 44.8 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 55/166 (33%), Gaps = 9/166 (5%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F + ++AI Y E S++ + +
Sbjct: 348 LWDVGFQLSFMAVAAILLLY------RPIERWMPEAILVRSAVVGKLWGMM--AVSLAAQ 399
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + +F Y L+ N+LA+P+ ++ + L+ L L ++ + W
Sbjct: 400 LGTAPLVAYYFGRFSCYFLLTNLLAVPLTVLILYTSCLLFALSFAPLLQSVVAVALTWMT 459
Query: 154 DIIIHIAHRISVAHNEFCIG-RIPETSFVTIVVEFLLMVFCKTNIR 198
++ H ++ G I + V + + + +R
Sbjct: 460 QVLNHYLSLLANWPGASVEGIHINLWQLALMYVIIACVCWVASYLR 505
>gi|260641965|ref|ZP_05414144.2| competence protein [Bacteroides finegoldii DSM 17565]
gi|260623918|gb|EEX46789.1| competence protein [Bacteroides finegoldii DSM 17565]
Length = 694
Score = 44.8 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 27/205 (13%), Positives = 70/205 (34%), Gaps = 28/205 (13%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L+ PF T+ A L PA GLFD F + +++I ++
Sbjct: 320 LADVFGRQPFSL-NTLAVTAWLMLLCNPA--GLFDVGFQLSFLAVASI--------LLIQ 368
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ + + + + +S + ++ + ++ +F V+ L+ N+L IP+
Sbjct: 369 RPVYRLFAVR--NRVGKSVWGLM--SVSIAAQIGTAPLVMFYFSRFSVHFLLTNLLVIPL 424
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF- 180
++ ++ A + +LL + + G+ ++ + + +
Sbjct: 425 ITIILY-AAIFMLLLTPF--PWLQIWAV-VGVRKLLEGLNLFVRWVEQLPCSSVDGIWLY 480
Query: 181 -------VTIVVEFLLMVFCKTNIR 198
+ + + +R
Sbjct: 481 QLEVCGIYVFLFGAVCYCLHR-RLR 504
>gi|303237723|ref|ZP_07324283.1| ComEC/Rec2-like protein [Prevotella disiens FB035-09AN]
gi|302482175|gb|EFL45210.1| ComEC/Rec2-like protein [Prevotella disiens FB035-09AN]
Length = 511
Score = 44.8 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 19/163 (11%), Positives = 46/163 (28%), Gaps = 20/163 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYS-IPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
F +F + + Y +P+ W W + +
Sbjct: 352 GFQLSFIAVLFILLFSPLIYGIVPRKRLQRFWILRWVWGLV-------------TVSVAA 398
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ + +F Y L++N + IP + ++ A L+ + I + M
Sbjct: 399 QIGTAPLVAYYFSRFSCYFLLSNFVVIPCATLILYAAVLLFLFSFIPVVQAFIGNFMLLT 458
Query: 153 LDIIIHIAHRISVAHNEF------CIGRIPETSFVTIVVEFLL 189
+ + H I+ ++ V + ++
Sbjct: 459 IQFMNKSLHTIAHWQGASIENLQPNELQVALLYVVIFCIGWIW 501
>gi|199598190|ref|ZP_03211612.1| Predicted hydrolase (metallo-beta-lactamase superfamily) protein
[Lactobacillus rhamnosus HN001]
gi|258508330|ref|YP_003171081.1| metallo-beta-lactamase superfamily hydrolase protein [Lactobacillus
rhamnosus GG]
gi|199590951|gb|EDY99035.1| Predicted hydrolase (metallo-beta-lactamase superfamily) protein
[Lactobacillus rhamnosus HN001]
gi|257148257|emb|CAR87230.1| Hydrolase (Metallo-beta-lactamase superfamily) protein
[Lactobacillus rhamnosus GG]
gi|259649646|dbj|BAI41808.1| putative hydrolase [Lactobacillus rhamnosus GG]
Length = 734
Score = 44.8 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 12/124 (9%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ H + + N L +PI +++P + A+L+ L + + I+I
Sbjct: 351 PVIAWHTFSFNLLTVFFNWLLMPIFELIIMPGLVFALLMPHAGLTYLFNDALQLLETILI 410
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGIT-IIILFTFP 216
++H + IG P V+ +M+ T + + ++L +
Sbjct: 411 RLSH----LPGQIIIGAFPSW---LAVLGVFVMMLVLTWQCW----PVAVGWFVVLALWS 459
Query: 217 YSFS 220
+
Sbjct: 460 WYQP 463
>gi|237714420|ref|ZP_04544901.1| competence protein [Bacteroides sp. D1]
gi|229445584|gb|EEO51375.1| competence protein [Bacteroides sp. D1]
Length = 618
Score = 44.8 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 43/119 (36%), Gaps = 11/119 (9%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
++ + ++ +F V+ L+ N++ IP+++ ++ A ++ +LL +
Sbjct: 317 SVSVAAQIGTAPLVLFYFSRFSVHFLLTNLVVIPLITIILY-AAVVMLLLTPF--SWLQI 373
Query: 147 GVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF-------VTIVVEFLLMVFCKTNIR 198
GV G+ ++ + I + IV+ L F R
Sbjct: 374 GVAG-GVKKLLEGLNFFVRWVERLPCASIDGIWLYQSEVLGIYIVIALLTYYFMNRRYR 431
>gi|319775004|ref|YP_004137492.1| recombination protein 2 [Haemophilus influenzae F3047]
gi|317449595|emb|CBY85800.1| recombination protein 2 [Haemophilus influenzae F3047]
Length = 788
Score = 44.8 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ + F+ + + G +AN++A+PI SF+++P L A+ +A G+ +
Sbjct: 382 TPLQLFLFNGLSLSGFLANLMAVPIYSFLLVPLILFAVFTNGTMFSWQLANKLAEGITGL 441
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
I + + + + +++ +
Sbjct: 442 ISVFQGNWL-----TVSFNLALFLTALCAGIFMLIIWR 474
>gi|332829253|gb|EGK01907.1| hypothetical protein HMPREF9455_00029 [Dysgonomonas gadei ATCC
BAA-286]
Length = 534
Score = 44.8 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 71/194 (36%), Gaps = 27/194 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + + +I Y +PK+ + K + +I Q F I A + T+
Sbjct: 348 LFDIGFQLSFTSVLSILYL--LPKV----SALLKVENKYLRNIWQMFTLSIVAQLATF-- 399
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI-----LLMI---LSLDNIP 145
+ +F P Y AN+L +P+++ ++ G I + ++M +P
Sbjct: 400 ----PLCLYYFGTFPTYFFAANLLIVPLVTLIIYTVGGIGLAKMLSMIMPDLTACFYYLP 455
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIG---RIPETSFV-TIVVEFLLMVFCKTNIRHIG 201
+ + + ++ I G + + T++ L+ + K G
Sbjct: 456 VKTLQFLVWLMTSIIRFFEGLPLALIDGIEISFTDMILIYTLITGLLIFLIYKKPK---G 512
Query: 202 SIMIGITIIILFTF 215
I+ + + F
Sbjct: 513 LILGLFAVFLFFGV 526
>gi|253566320|ref|ZP_04843774.1| competence protein [Bacteroides sp. 3_2_5]
gi|251945424|gb|EES85862.1| competence protein [Bacteroides sp. 3_2_5]
Length = 699
Score = 44.8 bits (104), Expect = 0.024, Method: Composition-based stats.
Identities = 23/161 (14%), Positives = 63/161 (39%), Gaps = 23/161 (14%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA--NIGTY 91
LFD F + ++AI Y W ++++ + S L ++ A ++
Sbjct: 357 LFDVGFQLSFSAVAAILLLY-------------PWLFRQLP-VGNSLLKKVWALMSVSLA 402
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-----SLDNIPF 146
+ ++ +F P + L+ N+L IP++S ++ A + ++L +
Sbjct: 403 AQIGTAPLVLLYFSRFPTHFLLTNLLVIPLVS-GIMYATVALLVLTPFPMLYTGCSVVVR 461
Query: 147 GVMAWGLDIIIHIAHR-ISVAHNEFCIGRIPETSFVTIVVE 186
++ W ++ + H ++ + ++ +++
Sbjct: 462 SLVDWLNTMVRWVEHLPLASIDRVWIYPTEAFAFYLVLLIG 502
Score = 44.4 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 73/225 (32%), Gaps = 33/225 (14%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
+ + + A +SPPS P FD+ YKGIS I + +S +
Sbjct: 148 EGLRSGDELIFFAHVSPPSNNGNPDEFDYARYLRYKGISGIAF--------VASGNWKIT 199
Query: 69 TWKKISSIKQSFLN---------EIRANIGTYGSASASIFLIKH-------FHCIPVYGL 112
++ S +Q L + A++ + V G
Sbjct: 200 GYRFSRSCRQIALEYRDRILDQYRALKFNPDEFAVLAALTVGYKEELSEDIRETYSVSGA 259
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI 172
+++LA+ L G + ++L+ L +P +G+ + + ++ F
Sbjct: 260 -SHVLALSGLHI-----GFLYMMLLFF-LKWLPGNA--FGVRLFRAVVIITALWGFAFFT 310
Query: 173 GRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
G P I+ L + + + I+L P+
Sbjct: 311 GLSPSVVRSVIMFSLLALSILSRRTGISLNTLALTACIMLVVHPF 355
>gi|16759853|ref|NP_455470.1| hypothetical protein STY0984 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142374|ref|NP_805716.1| hypothetical protein t1951 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|25355640|pir||AE0614 probable competence-related protein STY0984 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16502146|emb|CAD05383.1| putative competence-related protein [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29138004|gb|AAO69565.1| putative competence-related protein [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
Length = 754
Score = 44.8 bits (104), Expect = 0.025, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 65/185 (35%), Gaps = 22/185 (11%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 380 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 439
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLL--MVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+ ++ I + + + + + +T + + ++L ++P
Sbjct: 440 N--ALPQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTW------PAVCLCGLLLMSWPLW 491
Query: 219 FSPDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKED 273
I+ G V ++D L I W P ++ +
Sbjct: 492 RP----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHN 547
Query: 274 LQEKN 278
L +
Sbjct: 548 LTPEG 552
>gi|295676926|ref|YP_003605450.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia sp. CCGE1002]
gi|295436769|gb|ADG15939.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia sp. CCGE1002]
Length = 877
Score = 44.8 bits (104), Expect = 0.025, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 65/183 (35%), Gaps = 19/183 (10%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHN------------TWTWKKISSIK--QSFLNEI 84
F + + AI + S + ++ W + I+ ++ +
Sbjct: 391 FWLSFCAVGAILFAMSGRPRVRGPQTSRQHEDGEGGAAQHRWLALRPVLIRHLRALAERL 450
Query: 85 R--ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD 142
R A++ + + + F IP+ G +AN AIP +S +V PA ++A + + LD
Sbjct: 451 RSAAHVQIAVTVALAPLTANWFAQIPLVGPLANAFAIPWVSALVTPA-VLAGVALPAPLD 509
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTN-IRHI 200
+ LD + +S + + + + V L + + +R
Sbjct: 510 AFAWRAAHTLLDGLAAGLQLVSGPRWTLWWLPQPHAWALAAAAVGVLWCLAPRGWPLRWA 569
Query: 201 GSI 203
+
Sbjct: 570 APL 572
>gi|301168654|emb|CBW28245.1| conserved inner membrane protein [Haemophilus influenzae 10810]
Length = 788
Score = 44.8 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 39/97 (40%), Gaps = 5/97 (5%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ + F+ + + G +AN++A+PI SF+++P L A+ +A G+ +
Sbjct: 382 TPLQLFLFNGLSLSGFLANLMAVPIYSFLLVPLILFAVFTNGTMFSWQLANKLAEGITGL 441
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
I + N F + + +++
Sbjct: 442 ISV-----FQGNWFNVSFNLALVLTALCAGIFMLIIW 473
>gi|229508023|ref|ZP_04397528.1| hypothetical protein VCF_003257 [Vibrio cholerae BX 330286]
gi|229511738|ref|ZP_04401217.1| hypothetical protein VCE_003147 [Vibrio cholerae B33]
gi|229518876|ref|ZP_04408319.1| hypothetical protein VCC_002903 [Vibrio cholerae RC9]
gi|229607570|ref|YP_002878218.1| hypothetical protein VCD_002482 [Vibrio cholerae MJ-1236]
gi|229343565|gb|EEO08540.1| hypothetical protein VCC_002903 [Vibrio cholerae RC9]
gi|229351703|gb|EEO16644.1| hypothetical protein VCE_003147 [Vibrio cholerae B33]
gi|229355528|gb|EEO20449.1| hypothetical protein VCF_003257 [Vibrio cholerae BX 330286]
gi|229370225|gb|ACQ60648.1| hypothetical protein VCD_002482 [Vibrio cholerae MJ-1236]
Length = 747
Score = 44.8 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 25/205 (12%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-----SLDNIPFGVMAW 151
+ F + V ++ N++ IP S V++PA + +LLM++ +
Sbjct: 371 APVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVVWPSVAAAYWPWVDWTFL 430
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
LD + A G + + + ++ F+ + C + + +I
Sbjct: 431 PLDWALQFADVGWWVVPSKVQGVVAASVAILLLYRFMSLKACS----------LLLGMIG 480
Query: 212 LFTFPYSFSP----DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
L+ + S +P D+L G L +++++ Y S W P
Sbjct: 481 LWWWFPSLTPLWRMDVLDVGHG-LAIVIEQDERAIVYDTGSS-----WPGGSYVQSVIEP 534
Query: 268 HVQKEDLQEKNQSSLKEILRSMQPR 292
+Q+ L++ + L +
Sbjct: 535 MLQQRGLRQVDGVILSHLDNDHAGD 559
>gi|307729226|ref|YP_003906450.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia sp. CCGE1003]
gi|307583761|gb|ADN57159.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia sp. CCGE1003]
Length = 985
Score = 44.8 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 56/138 (40%), Gaps = 6/138 (4%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
A++ + + + + F IP+ G +AN AIP +S V PA ++A + + LD
Sbjct: 524 AHVQLAVTLALAPLTVLWFAQIPLIGPLANAFAIPWVSVFVTPA-VLAGMALPAPLDAAA 582
Query: 146 FGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSI 203
+ LD+++ +S + + + + T L + + +R +
Sbjct: 583 LRIAHALLDVMMAGLQWLSGPRWVLWWLPQPDGWALATAAAGVLWCLAPRGWPLRWAAPL 642
Query: 204 MIGITIIILFTFPYSFSP 221
+ ++ + P + P
Sbjct: 643 ---TWLPLVASAPSAPPP 657
>gi|213424600|ref|ZP_03357383.1| hypothetical protein SentesTyphi_02291 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
Length = 754
Score = 44.8 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 65/185 (35%), Gaps = 22/185 (11%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 380 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 439
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLL--MVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+ ++ I + + + + + +T + + ++L ++P
Sbjct: 440 N--ALPQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTW------PAVCLCGLLLMSWPLW 491
Query: 219 FSPDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKED 273
I+ G V ++D L I W P ++ +
Sbjct: 492 RP----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHN 547
Query: 274 LQEKN 278
L +
Sbjct: 548 LTPEG 552
>gi|213852005|ref|ZP_03381537.1| hypothetical protein SentesT_03467 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 754
Score = 44.8 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 65/185 (35%), Gaps = 22/185 (11%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 380 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 439
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLL--MVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+ ++ I + + + + + +T + + ++L ++P
Sbjct: 440 N--ALPQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTW------PAVCLCGLLLMSWPLW 491
Query: 219 FSPDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKED 273
I+ G V ++D L I W P ++ +
Sbjct: 492 RP----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHN 547
Query: 274 LQEKN 278
L +
Sbjct: 548 LTPEG 552
>gi|15641881|ref|NP_231513.1| Rec2-related protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121587302|ref|ZP_01677074.1| ComEC/rec2 family protein [Vibrio cholerae 2740-80]
gi|121727104|ref|ZP_01680278.1| ComEC/rec2 family protein [Vibrio cholerae V52]
gi|147673615|ref|YP_001217413.1| ComEC/rec2 family protein [Vibrio cholerae O395]
gi|153818868|ref|ZP_01971535.1| ComEC/rec2 family protein [Vibrio cholerae NCTC 8457]
gi|227082009|ref|YP_002810560.1| Rec2-related protein [Vibrio cholerae M66-2]
gi|254848967|ref|ZP_05238317.1| ComEC/rec2 family protein [Vibrio cholerae MO10]
gi|298498080|ref|ZP_07007887.1| ComEC/rec2 family protein [Vibrio cholerae MAK 757]
gi|9656410|gb|AAF95027.1| Rec2-related protein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121548462|gb|EAX58520.1| ComEC/rec2 family protein [Vibrio cholerae 2740-80]
gi|121630482|gb|EAX62874.1| ComEC/rec2 family protein [Vibrio cholerae V52]
gi|126510596|gb|EAZ73190.1| ComEC/rec2 family protein [Vibrio cholerae NCTC 8457]
gi|146315498|gb|ABQ20037.1| ComEC/rec2 family protein [Vibrio cholerae O395]
gi|227009897|gb|ACP06109.1| Rec2-related protein [Vibrio cholerae M66-2]
gi|227013777|gb|ACP09987.1| Rec2-related protein [Vibrio cholerae O395]
gi|254844672|gb|EET23086.1| ComEC/rec2 family protein [Vibrio cholerae MO10]
gi|297542413|gb|EFH78463.1| ComEC/rec2 family protein [Vibrio cholerae MAK 757]
Length = 752
Score = 44.8 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 25/205 (12%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-----SLDNIPFGVMAW 151
+ F + V ++ N++ IP S V++PA + +LLM++ +
Sbjct: 376 APVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVVWPSVAAAYWPWVDWTFL 435
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
LD + A G + + + ++ F+ + C + + +I
Sbjct: 436 PLDWALQFADVGWWVVPSKVQGVVAASVAILLLYRFMSLKACS----------LLLGMIG 485
Query: 212 LFTFPYSFSP----DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
L+ + S +P D+L G L +++++ Y S W P
Sbjct: 486 LWWWFPSLTPLWRMDVLDVGHG-LAIVIEQDERAIVYDTGSS-----WPGGSYVQSVIEP 539
Query: 268 HVQKEDLQEKNQSSLKEILRSMQPR 292
+Q+ L++ + L +
Sbjct: 540 MLQQRGLRQVDGVILSHLDNDHAGD 564
>gi|238926940|ref|ZP_04658700.1| competence protein EC [Selenomonas flueggei ATCC 43531]
gi|238885174|gb|EEQ48812.1| competence protein EC [Selenomonas flueggei ATCC 43531]
Length = 811
Score = 44.8 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 54/146 (36%), Gaps = 7/146 (4%)
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP---AGLIA 133
+ L + +I L +F+ + + L+AN++ +PI+ ++I AG++A
Sbjct: 388 RLPRLVSMAFSITIAAQLMVLPVLAWYFNQVSISALLANLVVVPIVELIIIMGLFAGIVA 447
Query: 134 ILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
LL + L ++ ++ +A IG +P + +++
Sbjct: 448 YLLPLFGGILFAADSVLLGISFELTRALAAFPLSKVWLPSIGIVPSVCYYAVILMLCAPT 507
Query: 192 FCKTNI--RHIGSIMIGITIIILFTF 215
+ I R + I + +
Sbjct: 508 EMRRKILSRFLAYRRIAAVLCLALLV 533
Score = 44.4 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 64/185 (34%), Gaps = 8/185 (4%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
D I ++ P G PG D +GI+A I S + + W
Sbjct: 153 DVGRIGDRITAEGKIRRPHGYQNPGQIDTALLLRTQGITASLSARRGSVSIESRDDISLW 212
Query: 69 T--WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
++ + I+ +L +RA + +A+ L + I L A I+ +
Sbjct: 213 EQWMRRAAEIRTHYLERMRAVMPRTDAAAIFAMLFGGYEGIDPALLEA-YTTTGIVHILS 271
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI-----SVAHNEFCIGRIPETSFV 181
+ I+++ +++ + + W ++ A + G + +F+
Sbjct: 272 VSGSHISLIAAVIAWIAVILRLPRWFGAAVVISAIFFYVLLAGMVPPAVRSGMMGGAAFL 331
Query: 182 TIVVE 186
+V+
Sbjct: 332 GLVLG 336
>gi|229520339|ref|ZP_04409765.1| hypothetical protein VIF_000861 [Vibrio cholerae TM 11079-80]
gi|229342705|gb|EEO07697.1| hypothetical protein VIF_000861 [Vibrio cholerae TM 11079-80]
Length = 747
Score = 44.8 bits (104), Expect = 0.026, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 72/187 (38%), Gaps = 20/187 (10%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-----SLDNIPFGVMAW 151
+ F + V ++ N++ IP S V++PA + +LLM++ +
Sbjct: 371 APLTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVVWPSVAAAYWPWVDWTFL 430
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
LD + A G + + + ++ F+ + C + + +I
Sbjct: 431 PLDWALRFADVGWWVVPSKVQGVVAASVAILLLYRFMNLKACS----------LLLGMIG 480
Query: 212 LFTFPYSFSP----DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
L+ + S +P D+L G L +++++ Y S+ + ++I P +
Sbjct: 481 LWWWFPSLTPLWRMDVLDVGHG-LAIVIEQDERAIVYDTGSSWPGGSYVQSVIEPILQQR 539
Query: 268 HVQKEDL 274
+++ D
Sbjct: 540 GLRQVDG 546
>gi|311694958|gb|ADP97831.1| DNA internalization-related competence protein ComEC/Rec2 [marine
bacterium HP15]
Length = 802
Score = 44.8 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 22/147 (14%), Positives = 54/147 (36%), Gaps = 15/147 (10%)
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
+ A + +G + ++ P+ GL+AN++AIP +S VV+P + LL +
Sbjct: 388 LRGLVLAQLAVFGGLWPILEILG--QGQPLVGLLANLVAIPWVSLVVMPVLVAGGLLAAV 445
Query: 140 --SLDNIPFGVMAWGLD----IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
+ + L ++ +A + + + +++ V +
Sbjct: 446 VPGAAQLFLPIFDLTLGVLWQWLMWLAQW-QAPDIPAGVPELVGWALLSVSV----LCLP 500
Query: 194 KTNIRHIGSIMIGITIIILFTFPYSFS 220
R ++ + +++ P S
Sbjct: 501 FAMFRL--VAVLSAVLWLVYPAPSSER 525
>gi|302385260|ref|YP_003821082.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium saccharolyticum WM1]
gi|302195888|gb|ADL03459.1| DNA internalization-related competence protein ComEC/Rec2
[Clostridium saccharolyticum WM1]
Length = 818
Score = 44.8 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 60/169 (35%), Gaps = 32/169 (18%)
Query: 33 GLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
G F +F + + AIG+ S W K+ + + + T
Sbjct: 329 GGFQLSFGAVF----AIGW---------VSPVIADWIGKEKP-LAAAVSASFAIQVVTM- 373
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPIL------SFVVIPAGLIAILLMIL--SLDNI 144
L+ HF+ IP+Y + N+L IP++ F I G ++ ++ + +
Sbjct: 374 -----PVLLYHFYQIPLYSIFLNLLVIPLMGGVLCSGFGTIILGSLSPVMGVFAAGTGHY 428
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF-VTIVVEFLLMVF 192
+ + + +A + G T++ + ++V + +
Sbjct: 429 ILALYEF---LCRKVAALPGDSLTTGRPGAARMTAYGLLLMVGLVSLTL 474
>gi|238763342|ref|ZP_04624306.1| hypothetical protein ykris0001_2980 [Yersinia kristensenii ATCC
33638]
gi|238698441|gb|EEP91194.1| hypothetical protein ykris0001_2980 [Yersinia kristensenii ATCC
33638]
Length = 730
Score = 44.8 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 52/144 (36%), Gaps = 9/144 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F I ++ ++AN+ A+P++S + +P L+A+ +L + W L I A
Sbjct: 356 FRGISLFSILANLWAVPLVSLITVPCVLLALAFSLL----PVVAGVFWSLADISLTAVLF 411
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSF--- 219
++ S +L M + R+ ++ + + ++
Sbjct: 412 PLSLMRMGWFHTGTASVAIGFSGWLAMFIWRFGWWRNYSIGVMVLCVNLVLLTQRRDEYQ 471
Query: 220 -SPDLLISEKGNLVALVDKNTLIS 242
D+L G V + K I
Sbjct: 472 WRVDMLDIGHGLAVVIEHKGKAII 495
>gi|313905052|ref|ZP_07838422.1| DNA internalization-related competence protein ComEC/Rec2
[Eubacterium cellulosolvens 6]
gi|313470122|gb|EFR65454.1| DNA internalization-related competence protein ComEC/Rec2
[Eubacterium cellulosolvens 6]
Length = 793
Score = 44.8 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 78/195 (40%), Gaps = 13/195 (6%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSS 62
+ K YDP A + I LS P+ F F +F++ GIS I Y + + S
Sbjct: 288 AAEKSYDPVCALSAAAIILLLSNPNC-LFYEGFQLSFAA-VAGISVI-YPALLSCVSTSF 344
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
+ + + + ++ L + ++ T + +F IP++ N+L +P +
Sbjct: 345 WRKGSKKKRLLEKLIEASLAYLAVSLATL------PLVAWYFFQIPLWSFAVNLLLVPAM 398
Query: 123 SFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRI-SVAHNEFCIGRIPETS 179
+ VV+ G + L ++ +L + + L + + + + + + GR
Sbjct: 399 T-VVMALGTAGLSLAMVSPALGRLLLVPVDLILQLYTVVTGLVRWLPSSMWICGRPDFRQ 457
Query: 180 FVTIVVEFLLMVFCK 194
V + L VF +
Sbjct: 458 LVFYYLLLLGWVFYR 472
>gi|261867902|ref|YP_003255824.1| DNA internalization-related competence protein ComEC/Rec2
[Aggregatibacter actinomycetemcomitans D11S-1]
gi|261413234|gb|ACX82605.1| DNA internalization-related competence protein ComEC/Rec2
[Aggregatibacter actinomycetemcomitans D11S-1]
Length = 744
Score = 44.8 bits (104), Expect = 0.027, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F+ I + IAN++A+P+ SFV++P L A++ + + D+ I +
Sbjct: 337 FNGISLNSFIANVIAVPLYSFVLVPLVLFAVVT---QGAWHSWQLAN---DLAEKITALL 390
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
+ +++ IP + ++T+ + FL +V
Sbjct: 391 TPWQDDWLAISIPHSLWITLCLTFLFLVAL 420
>gi|288924966|ref|ZP_06418902.1| ComEC/Rec2 family protein [Prevotella buccae D17]
gi|288338156|gb|EFC76506.1| ComEC/Rec2 family protein [Prevotella buccae D17]
Length = 523
Score = 44.4 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 54/170 (31%), Gaps = 21/170 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + + I FY + W I + I A + T
Sbjct: 361 LFDVGFQLSFVAVLGIKLFY------LPFAHSFHFRWWLPDRILRLCAISISAQLATM-- 412
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +F Y L+ N++ IP+ + ++ ++ + L F V+ L
Sbjct: 413 ----PLTLYYFGRFSSYFLLTNVVVIPLATLLIY-GVVLLMFLSPF---PPVFQVVREAL 464
Query: 154 DIII-----HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR 198
++ ++ S+ V + V L ++ IR
Sbjct: 465 LLLAEKMVGAVSWIASLPGASIGDIHFNRVQVVLLYVAMLSLLLAIGRIR 514
>gi|267992721|gb|ACY87606.1| hypothetical protein STM14_1112 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|323129248|gb|ADX16678.1| Uncharacterized protein ycaI [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
Length = 756
Score = 44.4 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 65/185 (35%), Gaps = 22/185 (11%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 382 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 441
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLL--MVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+ ++ I + + + + + +T + + ++L ++P
Sbjct: 442 N--ALPQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTW------PAVCLCGLLLMSWPLW 493
Query: 219 FSPDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKED 273
I+ G V ++D L I W P ++ +
Sbjct: 494 RP----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHN 549
Query: 274 LQEKN 278
L +
Sbjct: 550 LTPEG 554
>gi|284801869|ref|YP_003413734.1| hypothetical protein LM5578_1624 [Listeria monocytogenes 08-5578]
gi|284995011|ref|YP_003416779.1| hypothetical protein LM5923_1576 [Listeria monocytogenes 08-5923]
gi|284057431|gb|ADB68372.1| hypothetical protein LM5578_1624 [Listeria monocytogenes 08-5578]
gi|284060478|gb|ADB71417.1| hypothetical protein LM5923_1576 [Listeria monocytogenes 08-5923]
Length = 740
Score = 44.4 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NI 144
+I + +S+ ++ HF+ G+ N++ +PI + +++P L +L S + +
Sbjct: 345 SISFISTIMSSVVMMYHFYSFSWVGIFFNLIYVPIFTIIILPGCLTVFVLSFFSAEIFHF 404
Query: 145 PFGVMAWGLDIIIHIAHRISVAH 167
P V+ + + ++ + + +
Sbjct: 405 PEVVLTFFIQLVEKLTYIFAKIP 427
>gi|255027537|ref|ZP_05299523.1| hypothetical protein LmonocytFSL_16435 [Listeria monocytogenes FSL
J2-003]
Length = 559
Score = 44.4 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NI 144
+I + +S+ ++ HF+ G+ N++ +PI + +++P L +L S + +
Sbjct: 351 SISFISTIMSSVVMMYHFYSFSWVGIFFNLIYVPIFTIIILPGCLTVFVLSFFSAEIFHF 410
Query: 145 PFGVMAWGLDIIIHIAHRISVAH 167
P V+ + + ++ + + +
Sbjct: 411 PEVVLTFFIQLVEKLTYIFAKIP 433
>gi|254827770|ref|ZP_05232457.1| comEC [Listeria monocytogenes FSL N3-165]
gi|258600150|gb|EEW13475.1| comEC [Listeria monocytogenes FSL N3-165]
Length = 740
Score = 44.4 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NI 144
+I + +S+ ++ HF+ G+ N++ +PI + +++P L +L S + +
Sbjct: 345 SISFISTIMSSVVMMYHFYSFSWVGIFFNLIYVPIFTIIILPGCLTVFVLSFFSAEIFHF 404
Query: 145 PFGVMAWGLDIIIHIAHRISVAH 167
P V+ + + ++ + + +
Sbjct: 405 PEVVLTFFIQLVEKLTYIFAKIP 427
>gi|116872911|ref|YP_849692.1| comEC/Rec2 family protein [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116741789|emb|CAK20913.1| comEC/Rec2 family protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 719
Score = 44.4 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 32/228 (14%), Positives = 87/228 (38%), Gaps = 9/228 (3%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
+F ++ + Y S + + ++ + F I + +
Sbjct: 276 LSFILFFILQPYVIYEVGFQLSYAVSFGIILSSRQILTKQQNPFAKSF--AISLISTMMS 333
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIP--AGLIAILLMILSLDNIPFGVMAWGLD 154
S+ ++ HF+ G+ N+L +PI + +++P + I L+ + N+P ++ + +
Sbjct: 334 SVVMMYHFYSFSWAGIFFNLLYVPIFTVIILPSCFVVFFISLIFPAFLNMPESLLIFIIQ 393
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF--CKTNIRHIGSIMIGITIIIL 212
++ I + + + + P T + +++ +L++F + N +G + + +
Sbjct: 394 LMEKITNIFAQIPYQTIVTGRPNTLILILMILTILLLFYRWQKNKFPLGLLFCFCALCYI 453
Query: 213 FTFPYSFSPDLL-ISE-KGNLVALVDKNTLISNYSNPP-SFIFSQWKS 257
+F +S + I + L+ L + + F W
Sbjct: 454 ASFNFSGKVSFIDIGQGDSILIQLPNNAGNYLIDTGGQLPFEKENWAK 501
>gi|16803522|ref|NP_465007.1| hypothetical protein lmo1482 [Listeria monocytogenes EGD-e]
gi|224501578|ref|ZP_03669885.1| hypothetical protein LmonFR_03507 [Listeria monocytogenes FSL
R2-561]
gi|16410911|emb|CAC99560.1| comEC [Listeria monocytogenes EGD-e]
Length = 740
Score = 44.4 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NI 144
+I + +S+ ++ HF+ G+ N++ +PI + +++P L +L S + +
Sbjct: 345 SISFISTIMSSVVMMYHFYSFSWVGIFFNLIYVPIFTIIILPGCLTVFVLSFFSAEIFHF 404
Query: 145 PFGVMAWGLDIIIHIAHRISVAH 167
P V+ + + ++ + + +
Sbjct: 405 PEVVLTFFIQLVEKLTYIFAKIP 427
>gi|47095435|ref|ZP_00233045.1| comE operon protein 3, putative [Listeria monocytogenes str. 1/2a
F6854]
gi|254829759|ref|ZP_05234414.1| hypothetical protein Lmon1_00320 [Listeria monocytogenes 10403S]
gi|254898352|ref|ZP_05258276.1| hypothetical protein LmonJ_01015 [Listeria monocytogenes J0161]
gi|254912156|ref|ZP_05262168.1| comEC [Listeria monocytogenes J2818]
gi|254936484|ref|ZP_05268181.1| comEC [Listeria monocytogenes F6900]
gi|47016256|gb|EAL07179.1| comE operon protein 3, putative [Listeria monocytogenes str. 1/2a
F6854]
gi|258609077|gb|EEW21685.1| comEC [Listeria monocytogenes F6900]
gi|293590128|gb|EFF98462.1| comEC [Listeria monocytogenes J2818]
Length = 740
Score = 44.4 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NI 144
+I + +S+ ++ HF+ G+ N++ +PI + +++P L +L S + +
Sbjct: 345 SISFISTIMSSVVMMYHFYSFSWVGIFFNLIYVPIFTIIILPGCLTVFVLSFFSAEIFHF 404
Query: 145 PFGVMAWGLDIIIHIAHRISVAH 167
P V+ + + ++ + + +
Sbjct: 405 PEVVLTFFIQLVEKLTYIFAKIP 427
>gi|302391371|ref|YP_003827191.1| DNA internalization-related competence protein ComEC/Rec2
[Acetohalobium arabaticum DSM 5501]
gi|302203448|gb|ADL12126.1| DNA internalization-related competence protein ComEC/Rec2
[Acetohalobium arabaticum DSM 5501]
Length = 775
Score = 44.4 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 79 SFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI 138
SF+ + A A L+ HF+ I +I NIL +P++S ++ G I++L+
Sbjct: 375 SFVARVLAA-SIAAQLGAFPILVYHFNRISFGPIIGNILVMPVVSLIIF-LGFISLLVGN 432
Query: 139 LSL 141
L L
Sbjct: 433 LHL 435
>gi|207856374|ref|YP_002243025.1| hypothetical protein SEN0887 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|206708177|emb|CAR32470.1| putative competence-related protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
Length = 754
Score = 44.4 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 380 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 439
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I ++ +L ++ + N+ + + ++L ++P
Sbjct: 440 NAL-----PQGWVNIDNRWQWLTLLPWLTLIAWRLNV-WRTCPAVCLCGLLLMSWPLWRP 493
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 494 ----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLT 549
Query: 276 EKN 278
+
Sbjct: 550 PEG 552
>gi|333006355|gb|EGK25863.1| DNA internalization-related competence protein ComEC/Rec2 [Shigella
flexneri VA-6]
Length = 427
Score = 44.4 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 61/172 (35%), Gaps = 21/172 (12%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
++ +I+ + W+ ++ ++ + I FH I +
Sbjct: 201 AAAVAALIFWYQWFPCPEWQLPPVLRAVVS---LIHLQLGITLLLMPMQIVIFHGISLTS 257
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
IAN+ AIP+++F+ +P + + M++ ++ GL S+
Sbjct: 258 FIANLFAIPLVTFITVP---LILAAMVVHFSGPL--ILEQGLK---------SLPEGWIN 303
Query: 172 IGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPD 222
I + + L+V + N R + + + +++ + PD
Sbjct: 304 IVECWQW---LSFSPWFLLVVWRLNAWRTLPVMCVAGGLLMCWPLWQKPRPD 352
>gi|153830808|ref|ZP_01983475.1| ComEC/rec2 family protein [Vibrio cholerae 623-39]
gi|148873715|gb|EDL71850.1| ComEC/rec2 family protein [Vibrio cholerae 623-39]
Length = 752
Score = 44.4 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 25/205 (12%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-----SLDNIPFGVMAW 151
+ F + V ++ N++ IP S V++PA + +LLM++ +
Sbjct: 376 APVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVVWPSVAAAYWPWVDWTFL 435
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
LD + A G + + + ++ F+ + C + + +I
Sbjct: 436 PLDWALQFADVGWWVVPSKVQGVVAASVAILLLYRFMSLKACS----------LLLGMIG 485
Query: 212 LFTFPYSFSP----DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
L+ + S +P D+L G L +++++ Y S W P
Sbjct: 486 LWWWFPSLTPLWRMDVLDVGHG-LAIVIEQDERAIVYDTGSS-----WPGGSYVQSVIEP 539
Query: 268 HVQKEDLQEKNQSSLKEILRSMQPR 292
+Q+ L++ + L +
Sbjct: 540 MLQQRGLRQVDGVILSHLDNDHAGD 564
>gi|16764343|ref|NP_459958.1| hypothetical protein STM0983 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|16419495|gb|AAL19917.1| putative recombination protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|261246199|emb|CBG24003.1| putative competence-related protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|301157526|emb|CBW17016.1| putative competence-related protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312911969|dbj|BAJ35943.1| hypothetical protein STMDT12_C10000 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|332987874|gb|AEF06857.1| hypothetical protein STMUK_0949 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 754
Score = 44.4 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 65/185 (35%), Gaps = 22/185 (11%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 380 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 439
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLL--MVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+ ++ I + + + + + +T + + ++L ++P
Sbjct: 440 N--ALPQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTW------PAVCLCGLLLMSWPLW 491
Query: 219 FSPDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKED 273
I+ G V ++D L I W P ++ +
Sbjct: 492 RP----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHN 547
Query: 274 LQEKN 278
L +
Sbjct: 548 LTPEG 552
>gi|124267738|ref|YP_001021742.1| putative transporter DNA uptake transmembrane protein [Methylibium
petroleiphilum PM1]
gi|124260513|gb|ABM95507.1| putative transporter DNA uptake transmembrane protein [Methylibium
petroleiphilum PM1]
Length = 846
Score = 44.4 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 48/137 (35%), Gaps = 2/137 (1%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
+ +F++ +++ + + + W+ ++ L+
Sbjct: 376 GYWLSFAAVGLLLASGEARGLVAATSGLATAPTRLRWQGVAEWLVRLLSGGLRTQAIATL 435
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWG 152
A + L+ F + + G AN++AIPI++ V P L+ +LL L + G
Sbjct: 436 GLAPLTLVF-FQQLSLVGFAANLVAIPIITLGVTPLALLGVLLPPLWGPAAWTVAQLNAG 494
Query: 153 LDIIIHIAHRISVAHNE 169
L + +
Sbjct: 495 LQWLATPDWAVWSVPAA 511
>gi|317491460|ref|ZP_07949896.1| competence protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316921007|gb|EFV42330.1| competence protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 757
Score = 44.4 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 30/207 (14%), Positives = 74/207 (35%), Gaps = 12/207 (5%)
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
I + ++ ++ + I FH + L AN +A+P+++++V+P L+ +
Sbjct: 359 IAKRYIGLRLLHLQLGIALCLMPVQIYLFHGVSGGALWANFIAVPLVTYLVVPMILLGLA 418
Query: 136 LMILSLDNIPFGVMAWGLDIIIHI-AHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
+ + + V + LD + + AH ++ R S +++ + F K
Sbjct: 419 TLWGADPFDAWHVAGFLLDRMQWVLAHLPTLW--VDMSERDVWISLSVLMLFIAVRSFSK 476
Query: 195 TNIRHIGSIMIGITIIILFTFPYSF---SPDLLISEKGNLVALVDKNTLISNYSNPPSFI 251
+ G + I + + + S + G +A+ ++ Y
Sbjct: 477 RGLLLWGLVQISVFLAFVSMQKTSEDEWRVHMFDVGHGLSIAI-ERQGRALLYDTGNK-- 533
Query: 252 FSQWKSALITPFHEAPHVQKEDLQEKN 278
W+ + P+++ L
Sbjct: 534 ---WEGGDVASSEIIPYLRWHGLALDG 557
>gi|262191319|ref|ZP_06049512.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio cholerae CT 5369-93]
gi|262032815|gb|EEY51360.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio cholerae CT 5369-93]
Length = 747
Score = 44.4 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 72/187 (38%), Gaps = 20/187 (10%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-----SLDNIPFGVMAW 151
+ F + V ++ N++ IP S V++PA + +LLM++ +
Sbjct: 371 APVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVVWPSVAAAYWPWVDWTFL 430
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
LD + A G + + + ++ F+ + C + + +I
Sbjct: 431 PLDWALQFADVGWWVVPSKVQGVVAASVAILLLYRFMSLKACS----------LLLGMIG 480
Query: 212 LFTFPYSFSP----DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
L+ + S +P D+L G L +++++ Y S+ + ++I P +
Sbjct: 481 LWWWFPSLTPLWRMDVLDVGHG-LAIVIEQDERAIVYDTGSSWPGGSYVQSVIEPILQQR 539
Query: 268 HVQKEDL 274
+++ D
Sbjct: 540 GLRQVDG 546
>gi|68248612|ref|YP_247724.1| recombination protein 2 [Haemophilus influenzae 86-028NP]
gi|68056811|gb|AAX87064.1| recombination protein 2 [Haemophilus influenzae 86-028NP]
Length = 788
Score = 44.4 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 39/97 (40%), Gaps = 5/97 (5%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ + F+ + + G +AN++A+PI SF+++P L A+ +A G+ +
Sbjct: 382 TPLQLFLFNGLSLSGFLANLMAVPIYSFLLVPLILFAVFTNGTMFSWQLANKLAEGITGL 441
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
I + N F + + +++
Sbjct: 442 ISV-----FQGNWFNVSFNLALVLTALCAGIFMLIIW 473
>gi|332284088|ref|YP_004415999.1| ComEC/Rec2 [Pusillimonas sp. T7-7]
gi|330428041|gb|AEC19375.1| ComEC/Rec2 [Pusillimonas sp. T7-7]
Length = 832
Score = 44.4 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 38/237 (16%), Positives = 81/237 (34%), Gaps = 18/237 (7%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
PF + + + L P F +F + Y +++ G++ ++ W
Sbjct: 348 PFRVLSLVAFVVVLLDPWA-LLASGFWLSFGAVYVLMASSGWYGQA-----MGQTQLKWR 401
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS-FVVIP 128
+ + + ++ +G + FH + + + N AIP++S V
Sbjct: 402 QRMPEFLATATRLQLAITVGLMPLLALI------FHEVSIVSPLVNAYAIPVISLLVTPL 455
Query: 129 AGLIAILLMILSLDNIPF---GVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIV 184
A L+A M L+ + + LD I+ +S F + P V +
Sbjct: 456 ALLLAGSAMAPGLEFLALACAWLGHAALDAIMLPTVWLSGLRAASFHVAAAPLWLTVIAI 515
Query: 185 VEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ RH+ +++ ++ P S DL + G A++ +
Sbjct: 516 LGLAAATLPYGIPGRHLAWLLVAPALLWWPNRPPEGSWDLHALDIGQGSAVLIQTAR 572
>gi|329960186|ref|ZP_08298628.1| ComEC/Rec2-like protein [Bacteroides fluxus YIT 12057]
gi|328532859|gb|EGF59636.1| ComEC/Rec2-like protein [Bacteroides fluxus YIT 12057]
Length = 677
Score = 44.4 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 60/183 (32%), Gaps = 14/183 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + ++AI F P+M + N W +
Sbjct: 335 LFDVGFQLSFAAVAAILVF--QPRMYSFRKVENRWLRYGWG----------LVTVSVAAQ 382
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWG 152
+ +I +F + L+ N+ IP++S V+ + ++ + L L +
Sbjct: 383 MGTAPLVIFYFSRFSTHFLLTNLWVIPMVSLVLY-SAVLLLALTPFPVLQQAFSPITEEL 441
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+ I I G + V + L M+ R ++ I + +++L
Sbjct: 442 VRIQNKGLQWIEHLPLSSLDGIWTDVWEVLLCYLLLGMMSYAMTRRTFRNVCISLFVLLL 501
Query: 213 FTF 215
Sbjct: 502 AVS 504
>gi|183179497|ref|ZP_02957708.1| ComEC/rec2 family protein [Vibrio cholerae MZO-3]
gi|183012908|gb|EDT88208.1| ComEC/rec2 family protein [Vibrio cholerae MZO-3]
Length = 753
Score = 44.4 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 72/187 (38%), Gaps = 20/187 (10%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-----SLDNIPFGVMAW 151
+ F + V ++ N++ IP S V++PA + +LLM++ +
Sbjct: 377 APVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVVWPSVAAAYWPWVDWTFL 436
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
LD + A G + + + ++ F+ + C + + +I
Sbjct: 437 PLDWALQFADVGWWVVPSKVQGVVAASVAILLLYRFMSLKACS----------LLLGMIG 486
Query: 212 LFTFPYSFSP----DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
L+ + S +P D+L G L +++++ Y S+ + ++I P +
Sbjct: 487 LWWWFPSLTPLWRMDVLDVGHG-LAIVIEQDERAIVYDTGSSWPGGSYVQSVIEPILQQR 545
Query: 268 HVQKEDL 274
+++ D
Sbjct: 546 GLRQVDG 552
>gi|256820927|ref|YP_003142206.1| ComEC/Rec2-related protein [Capnocytophaga ochracea DSM 7271]
gi|256582510|gb|ACU93645.1| ComEC/Rec2-related protein [Capnocytophaga ochracea DSM 7271]
Length = 636
Score = 44.4 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 57/133 (42%), Gaps = 16/133 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSES-HNTWTWKKISSIKQSFLNEIRANIGTYG 92
L+D F Y + +I FY + + + E+ + W W FL + A I
Sbjct: 351 LYDVGFQLSYAAVFSIMKFYPVMRKWWQPENKYLQWIWSL-------FLVGLSAQIVVL- 402
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAW 151
+ +FH P+ ++N++ +P+L ++I G+I++ L L L ++
Sbjct: 403 -----PISLYYFHQFPILFFVSNLVVVPLLQPILI-GGIISLCLGSLGILPYAIVFILEK 456
Query: 152 GLDIIIHIAHRIS 164
+ ++ + I+
Sbjct: 457 LIALMNFLVAFIA 469
>gi|254447945|ref|ZP_05061409.1| DNA internalization-related competence protein ComEC/Rec2 [gamma
proteobacterium HTCC5015]
gi|198262371|gb|EDY86652.1| DNA internalization-related competence protein ComEC/Rec2 [gamma
proteobacterium HTCC5015]
Length = 769
Score = 44.4 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 40/125 (32%), Gaps = 6/125 (4%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAG-LIAIL--LMILSLDNIPFGVMAWGLDIIIHIA 160
F V G ++NI+ IP+ + +++P LI +L L + I + G+ +
Sbjct: 379 FGQGAVLGALSNIVLIPLTALLILPLACLIGLLSWLWPAATQAI-LPLADEGVRALHGAM 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN--IRHIGSIMIGITIIILFTFPYS 218
++ ++ L V R + + ++
Sbjct: 438 AWVADQPLAQASQAAIHWQQAALLSALLFFVLWHWRPLARSWTVAIRFLALLAGLAVLLE 497
Query: 219 FSPDL 223
P L
Sbjct: 498 QPPSL 502
>gi|321223306|gb|EFX48375.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Typhimurium
str. TN061786]
Length = 697
Score = 44.4 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 65/185 (35%), Gaps = 22/185 (11%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 323 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 382
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLL--MVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+ ++ I + + + + + +T + + ++L ++P
Sbjct: 383 N--ALPQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTW------PAVCLCGLLLMSWPLW 434
Query: 219 FSPDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKED 273
I+ G V ++D L I W P ++ +
Sbjct: 435 RP----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHN 490
Query: 274 LQEKN 278
L +
Sbjct: 491 LTPEG 495
>gi|153825170|ref|ZP_01977837.1| ComEC/rec2 family protein [Vibrio cholerae MZO-2]
gi|149741149|gb|EDM55200.1| ComEC/rec2 family protein [Vibrio cholerae MZO-2]
Length = 752
Score = 44.4 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 25/205 (12%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-----SLDNIPFGVMAW 151
+ F + V ++ N++ IP S V++PA + +LLM++ +
Sbjct: 376 APVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVVWPSVAAAYWPWVDWTFL 435
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
LD + A G + + + ++ F+ + C + + +I
Sbjct: 436 PLDWALQFADVGWWVVPSKVQGVVAASVAILLLYRFMSLKACS----------LLLGMIG 485
Query: 212 LFTFPYSFSP----DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
L+ + S +P D+L G L +++++ Y S W P
Sbjct: 486 LWWWFPSLTPLWRMDVLDVGHG-LAIVIEQDERAIVYDTGSS-----WPGGSYVQSVIEP 539
Query: 268 HVQKEDLQEKNQSSLKEILRSMQPR 292
+Q+ L++ + L +
Sbjct: 540 MLQQRGLRQVDGVILSHLDNDHAGD 564
>gi|296137556|ref|YP_003644798.1| DNA internalization-related competence protein ComEC/Rec2
[Thiomonas intermedia K12]
gi|295797678|gb|ADG32468.1| DNA internalization-related competence protein ComEC/Rec2
[Thiomonas intermedia K12]
Length = 871
Score = 44.4 bits (103), Expect = 0.031, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 49/149 (32%), Gaps = 4/149 (2%)
Query: 30 AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIG 89
F +F + G+ + P+ + L A+
Sbjct: 419 VRQAGFWLSFVAV--GMLFVAGNRRHPETAALACGPAEAAPAGRLQRGAQALRR-AAHSQ 475
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM 149
+ + + F I V +AN LAIP+++ VV P + +LL LD + +
Sbjct: 476 WVATIALLPLTLLFFQQIAVLSPLANALAIPVVTLVVAPLAVGGLLL-PAPLDGWAWRLG 534
Query: 150 AWGLDIIIHIAHRISVAHNEFCIGRIPET 178
AW + + +++ P+
Sbjct: 535 AWVQQGLDAVLRQMADWPLAQWHAAAPDG 563
>gi|254286764|ref|ZP_04961718.1| ComEC/rec2 family protein [Vibrio cholerae AM-19226]
gi|150423191|gb|EDN15138.1| ComEC/rec2 family protein [Vibrio cholerae AM-19226]
Length = 752
Score = 44.4 bits (103), Expect = 0.032, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 25/205 (12%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-----SLDNIPFGVMAW 151
+ F + V ++ N++ IP S V++PA + +LLM++ +
Sbjct: 376 APVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVVWPSVAAAYWPWVDWTFL 435
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
LD + A G + + + ++ F+ + C + + +I
Sbjct: 436 PLDWALQFADVGWWVVPSKVQGVVAASVAILLLYRFMSLKACS----------LLLGMIG 485
Query: 212 LFTFPYSFSP----DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
L+ + S +P D+L G L +++++ Y S W P
Sbjct: 486 LWWWFPSLTPLWRMDVLDVGHG-LAIVIEQDERAIVYDTGSS-----WPGGSYVQSVIEP 539
Query: 268 HVQKEDLQEKNQSSLKEILRSMQPR 292
+Q+ L++ + L +
Sbjct: 540 MLQQRGLRQVDGVILSHLDNDHAGD 564
>gi|317499483|ref|ZP_07957749.1| competence protein [Lachnospiraceae bacterium 5_1_63FAA]
gi|316893257|gb|EFV15473.1| competence protein [Lachnospiraceae bacterium 5_1_63FAA]
Length = 729
Score = 44.4 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 49/126 (38%), Gaps = 13/126 (10%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+I + P + +AN+ A+P+ + A L+ L + + I + + ++
Sbjct: 370 PLIIYFQYEAPAFSFLANVAAVPLATCAFTLAFLLIFLPYTVFHEAISWMIQG-----VL 424
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTI-VVEFLLMVFCK--TNIRHIGSIMIGITIIILFT 214
I+ + ++ IG +P + + L K RHI + + +IIL
Sbjct: 425 WISRQ---SYGMLTIGHVPFLWVLLFYFMTGLW--IWKKNGQNRHIRISLAYVIMIILIW 479
Query: 215 FPYSFS 220
P +
Sbjct: 480 IPMARR 485
>gi|167766650|ref|ZP_02438703.1| hypothetical protein CLOSS21_01156 [Clostridium sp. SS2/1]
gi|167711773|gb|EDS22352.1| hypothetical protein CLOSS21_01156 [Clostridium sp. SS2/1]
gi|291558664|emb|CBL37464.1| DNA internalization-related competence protein ComEC/Rec2
[butyrate-producing bacterium SSC/2]
Length = 729
Score = 44.4 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 49/126 (38%), Gaps = 13/126 (10%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+I + P + +AN+ A+P+ + A L+ L + + I + + ++
Sbjct: 370 PLIIYFQYEAPAFSFLANVAAVPLATCAFTLAFLLIFLPYTVFHEAISWMIQG-----VL 424
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTI-VVEFLLMVFCK--TNIRHIGSIMIGITIIILFT 214
I+ + ++ IG +P + + L K RHI + + +IIL
Sbjct: 425 WISRQ---SYGMLTIGHVPFLWVLLFYFMTGLW--IWKKNGQNRHIRISLAYVIMIILIW 479
Query: 215 FPYSFS 220
P +
Sbjct: 480 IPMARR 485
>gi|197248300|ref|YP_002145901.1| hypothetical protein SeAg_B0989 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197212003|gb|ACH49400.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Agona str.
SL483]
Length = 737
Score = 44.4 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 363 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 422
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I ++ +L ++ + N+ + + ++L ++P
Sbjct: 423 NAL-----PQGWVNIDNRWQWLTLLPWLTLIAWRLNV-WRTCPAVCLCGLLLMSWPLWRP 476
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 477 ----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLT 532
Query: 276 EKN 278
+
Sbjct: 533 PEG 535
>gi|326622660|gb|EGE29005.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Dublin str.
3246]
Length = 701
Score = 44.4 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 327 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 386
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I ++ +L ++ + N+ + + ++L ++P
Sbjct: 387 NAL-----PQGWVNIDNRWQWLTLLPWLTLIAWRLNV-WRTCPAVCLCGLLLMSWPLWRP 440
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 441 ----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLT 496
Query: 276 EKN 278
+
Sbjct: 497 PEG 499
>gi|265767013|ref|ZP_06094842.1| competence protein [Bacteroides sp. 2_1_16]
gi|263253390|gb|EEZ24866.1| competence protein [Bacteroides sp. 2_1_16]
Length = 699
Score = 44.4 bits (103), Expect = 0.033, Method: Composition-based stats.
Identities = 37/225 (16%), Positives = 73/225 (32%), Gaps = 33/225 (14%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
+ + + A +SPPS P FD+ YKGIS I + +S +
Sbjct: 148 EGLRSGDELIFFAHVSPPSNNGNPDEFDYARYLRYKGISGIAF--------VASGNWKIT 199
Query: 69 TWKKISSIKQSFLN---------EIRANIGTYGSASASIFLIKH-------FHCIPVYGL 112
++ S +Q L + A++ + V G
Sbjct: 200 GYRFSRSCRQIALEYRERILDQYRALKFNPDEFAVLAALTVGYKEELSEDIRETYSVSGA 259
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI 172
+++LA+ L G + ++L+ L +P +G+ + + ++ F
Sbjct: 260 -SHVLALSGLHI-----GFLYMMLLFF-LKWLPGNA--FGVRLFRAVVIITALWGFAFFT 310
Query: 173 GRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
G P I+ L + + + I+L P+
Sbjct: 311 GLSPSVVRSVIMFSLLALSVLSRRTGISLNTLALTACIMLVVHPF 355
Score = 42.5 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 47/108 (43%), Gaps = 17/108 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRA--NIGTY 91
LFD F + ++AI Y W ++++ + S L ++ A ++
Sbjct: 357 LFDVGFQLSFSAVAAILLLY-------------PWLFRQLP-VGNSLLKKVWALMSVSLA 402
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
+ ++ +F P + L+ N+L IP++S ++ A + ++L
Sbjct: 403 AQIGTAPLVLLYFSRFPTHFLLTNLLVIPLVS-GIMYATVALLVLTPF 449
>gi|253990296|ref|YP_003041652.1| hypothetical protein PAU_02820 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781746|emb|CAQ84909.1| hypothetical membrane protein ycai [Photorhabdus asymbiotica]
Length = 787
Score = 44.4 bits (103), Expect = 0.035, Method: Composition-based stats.
Identities = 20/186 (10%), Positives = 62/186 (33%), Gaps = 24/186 (12%)
Query: 30 AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIG 89
F +F + + +F++ + W + + +
Sbjct: 358 VLSDSFWLSFFAVMALM--FWFFWAPLGEPFRYGWKWLWLRGLYMQMGMMLMLIPLQLLL 415
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL--LMILSLDNIPFG 147
FH + L AN A+PI+SF+ +P ++A++ + + +
Sbjct: 416 --------------FHGVNFSALFANFWAVPIISFITVPLIMLALISTFCPF-IHTLLWQ 460
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
++ + + + I + + + + + +++ + ++IGI
Sbjct: 461 LVDYSVTFSL-----IPLPVLQQSWSETGSFPILITFIGWFVVIVWRFAWWQSYKLLIGI 515
Query: 208 TIIILF 213
++ ++
Sbjct: 516 SLGVML 521
>gi|290510656|ref|ZP_06550026.1| DNA internalization competence protein ComEC/Rec2 [Klebsiella sp.
1_1_55]
gi|289777372|gb|EFD85370.1| DNA internalization competence protein ComEC/Rec2 [Klebsiella sp.
1_1_55]
Length = 754
Score = 44.0 bits (102), Expect = 0.036, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 53/127 (41%), Gaps = 17/127 (13%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
FH + + + AN+LA+P+++ + +P L A M+L L ++ ++ +A
Sbjct: 380 FHGVSLTSMAANLLAVPLVTLLAVPLILGA---MLLHLTGPGM------VESLLWLAADR 430
Query: 164 SVAHNEFCIGRIPETSF-----VTIVVEFLLMVFCKTN---IRHIGSIMIGITIIILFTF 215
+A + + R+P+ + ++ RH ++ + + +++ F
Sbjct: 431 VLALLFWALRRLPDGWLPLDARWLWISSLPWLLVMGWRFQSWRHFPALCLSVLFLLMRPF 490
Query: 216 PYSFSPD 222
F D
Sbjct: 491 WRPFPAD 497
>gi|167626890|ref|YP_001677390.1| competence protein [Francisella philomiragia subsp. philomiragia
ATCC 25017]
gi|167596891|gb|ABZ86889.1| competence protein [Francisella philomiragia subsp. philomiragia
ATCC 25017]
Length = 388
Score = 44.0 bits (102), Expect = 0.036, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ +F V ++ANI+AIP++SFV++P L+ +LL + L + + + + ++I
Sbjct: 46 PISVYYFGGFSVISILANIVAIPLVSFVIVPLLLVCLLLSYVGLS--FWIIPSLVIKLLI 103
Query: 158 H 158
Sbjct: 104 A 104
>gi|293390234|ref|ZP_06634568.1| DNA internalization-related competence protein ComEC/Rec2
[Aggregatibacter actinomycetemcomitans D7S-1]
gi|290950768|gb|EFE00887.1| DNA internalization-related competence protein ComEC/Rec2
[Aggregatibacter actinomycetemcomitans D7S-1]
Length = 744
Score = 44.0 bits (102), Expect = 0.036, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F+ I + IAN++A+P+ SFV++P L A++ + + + D+ I +
Sbjct: 337 FNGISLNSFIANVIAVPLYSFVLVPLVLFAVVTQGV---WHSWQLAN---DLAEKITALL 390
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
+ +++ IP + ++T+ + FL +V
Sbjct: 391 TPWQDDWLAISIPHSLWITLCLTFLFLVAL 420
>gi|219670323|ref|YP_002460758.1| ComEC/Rec2-related protein [Desulfitobacterium hafniense DCB-2]
gi|219540583|gb|ACL22322.1| ComEC/Rec2-related protein [Desulfitobacterium hafniense DCB-2]
Length = 872
Score = 44.0 bits (102), Expect = 0.036, Method: Composition-based stats.
Identities = 39/226 (17%), Positives = 76/226 (33%), Gaps = 35/226 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + + + +P + +S IK +F A T
Sbjct: 348 GFQLSFMATWGILVLSADLKKMPWVRDWPKS-----------IKSAFSMTCAAQAATLPL 396
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
++ FH + + G++AN+LA+ +L + G++A+ L + I + L
Sbjct: 397 MISA------FHRLSIIGVLANLLALFVLGS-IFELGILAVFLSF--IPQIALPLFQVSL 447
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN--IRHIGSIMIGITIII 211
++ ++ + + RIP + L V + +G +G I +
Sbjct: 448 WLLTGVSEFL------MQLARIPWADVWVVNPGPLFWVCWYGWFLVLLVGKEKVGFMIRM 501
Query: 212 LFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKS 257
Y +I VAL+ P S +W S
Sbjct: 502 GLGNLYRVGQPWII----RGVALMRPLGAALQKVMPQS---ERWWS 540
>gi|284007584|emb|CBA73149.1| competence protein ComEC [Arsenophonus nasoniae]
Length = 772
Score = 44.0 bits (102), Expect = 0.036, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 46/121 (38%), Gaps = 8/121 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHR 162
F I + AN+ A+PI+SF+ IP +++ + + + N+ F ++ + +++
Sbjct: 406 FQGINIASFWANLWAVPIISFITIPLIMVSYICIFWHSVQNLLFDIIDKSISLVLW---- 461
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
+ ++ ++ + IT++I ++ D
Sbjct: 462 ---PLPNIERYWLDSGHLPILITGVSWLIILCWQFGWFFQYKLLITLLIYWSITTLKQND 518
Query: 223 L 223
L
Sbjct: 519 L 519
>gi|205358141|ref|ZP_03223943.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205327283|gb|EDZ14047.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
Length = 737
Score = 44.0 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 65/185 (35%), Gaps = 22/185 (11%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 363 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 422
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLL--MVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+ ++ I + + + + + +T + + ++L ++P
Sbjct: 423 N--ALPQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTW------PAVCLCGLLLMSWPLW 474
Query: 219 FSPDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKED 273
I+ G V ++D L I W P ++ +
Sbjct: 475 RP----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHN 530
Query: 274 LQEKN 278
L +
Sbjct: 531 LTPEG 535
>gi|94309988|ref|YP_583198.1| DNA internalization-related competence protein ComEC/Rec2
[Cupriavidus metallidurans CH34]
gi|93353840|gb|ABF07929.1| DNA internalization-related competence protein ComEC/Rec2
[Cupriavidus metallidurans CH34]
Length = 851
Score = 44.0 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 16/118 (13%), Positives = 39/118 (33%), Gaps = 13/118 (11%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F + V + AN +AIP++S +V P L +L + L+ ++ +
Sbjct: 454 FGQVSVVSVFANAVAIPVVSLLVTPLALAGAVLPP-GWAAPLLWIAHKALEWLVGGLAWL 512
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN------------IRHIGSIMIGITI 209
+ P + + + ++ R +G +++ +
Sbjct: 513 AAPAWAVWEAAHPGPVATGLALAGVYVLLIPRPSDAKGARRVQIVPRWLGVLLMVPML 570
Score = 36.3 bits (82), Expect = 9.7, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 77/244 (31%), Gaps = 13/244 (5%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW 68
+ RL P G A P FD+ + +GI A GY + + +
Sbjct: 154 EVLQPGQRHRLTVRLRRPRGLANPHGFDYGYWLLAEGIGATGYVRHGQLLNRDAAMPLSI 213
Query: 69 TWKK-ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGL-----IANILAIPIL 122
+ + ++ + ++ A + + + + I+++++I L
Sbjct: 214 RITQWRAGLRDRLWAALPSDAQYRAVLVALVIGDQRGIGQADWDVFRRTGISHLVSISGL 273
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII-----IHIAHRISVAHNEFCIGRIPE 177
+I + A+ M+ + L +I + + + A I +
Sbjct: 274 HITMISGAVAALAGMLWRHSFGIGRKLRRPLPLIWPAQKVAMVVAVQTALGYGLIAGMQI 333
Query: 178 TSFVTIVVEFLLMV-FCKTNIRHIGSIMIGITIIILFTFPYSF-SPDLLISEKGNLVALV 235
+ T+ + + V + ++ I + P++ SP +S V +
Sbjct: 334 PALRTVSMLMVAAVALWSGRMPPPTVVLAWAAGIAVAIDPWAVMSPGFWLSFGAVAVIFL 393
Query: 236 DKNT 239
Sbjct: 394 GARG 397
>gi|319400924|gb|EFV89143.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus epidermidis FRI909]
Length = 738
Score = 44.0 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 27/52 (51%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
I + + I HF+ GL++N++ +P SF++ P+ +I +L+
Sbjct: 330 ISFLAQLGSIVINIYHFNQFQWIGLLSNLIFVPFYSFILFPSVIIYFILIHF 381
>gi|289550641|ref|YP_003471545.1| Late competence protein ComEC [Staphylococcus lugdunensis HKU09-01]
gi|289180173|gb|ADC87418.1| Late competence protein ComEC [Staphylococcus lugdunensis HKU09-01]
Length = 733
Score = 44.0 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 14/142 (9%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISA------IGYFYS 54
+ ++ ++ P + I I L P + GL F I IG+ +S
Sbjct: 250 IFAVETQFAPSALRSIIAMIIILFKPKRTSLSGLNILAFVFLLLLIVQPDFLYDIGFQFS 309
Query: 55 IPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA 114
++ + + +S +K F+ A +G A + I HF+ + G++
Sbjct: 310 FLISLFLILAQPSI--HHLSRLKAFFVITYIAQLG------ALLIQIYHFNQVQWIGILT 361
Query: 115 NILAIPILSFVVIPAGLIAILL 136
N++ +P+ SF+ P L L+
Sbjct: 362 NLIFVPLYSFIYFPLTLFFFLI 383
>gi|295096386|emb|CBK85476.1| DNA internalization-related competence protein ComEC/Rec2
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 698
Score = 44.0 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 49/120 (40%), Gaps = 9/120 (7%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS---LDNIPFGVMAWGLDIIIHIA 160
FH + L+AN+ A+P+++F+ +P L+ + L + L++I + L + +
Sbjct: 324 FHGFSLSSLVANLFAVPLVTFISVPLILLGMFLHLFPVAVLESIVWLATDKSLAGLFWL- 382
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + E ++ +LL++ + + + + ++ FP
Sbjct: 383 ----LMRLPNGWQDVDERWQYLTLLPWLLVIGWRFRA-FSAAPAVCLAGSVVLAFPLWHR 437
>gi|284036834|ref|YP_003386764.1| ComEC/Rec2-related protein [Spirosoma linguale DSM 74]
gi|283816127|gb|ADB37965.1| ComEC/Rec2-related protein [Spirosoma linguale DSM 74]
Length = 708
Score = 44.0 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 50/136 (36%), Gaps = 6/136 (4%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL--IAILLMILSLD 142
+ + +FH P Y L+AN + I ++S +++P + +A + +
Sbjct: 396 LTAVALVAQLITFPLGVFYFHQFPTYFLLANPIVI-VMSNILLPLAMTTLAFSGIPYVNE 454
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI-VVEFLLMVFCKTNIR--H 199
+ + + + + S+ + I + + V I VV F + T R
Sbjct: 455 LLGWLLEKTAWFLNYAVTQTGSLPGAAWDGLWISQLAMVLIYVVLFCGVALLITRDRVYL 514
Query: 200 IGSIMIGITIIILFTF 215
+ + + + L +
Sbjct: 515 WATSLASLVVAGLTIW 530
>gi|52081107|ref|YP_079898.1| hypothetical protein BL02087 [Bacillus licheniformis ATCC 14580]
gi|52786485|ref|YP_092314.1| hypothetical protein BLi02750 [Bacillus licheniformis ATCC 14580]
gi|319644936|ref|ZP_07999169.1| late competence protein ComEC [Bacillus sp. BT1B_CT2]
gi|18266366|gb|AAL67526.1|AF459916_3 late competence protein ComEC [Bacillus licheniformis]
gi|52004318|gb|AAU24260.1| ComEC [Bacillus licheniformis ATCC 14580]
gi|52348987|gb|AAU41621.1| ComEC [Bacillus licheniformis ATCC 14580]
gi|317392745|gb|EFV73539.1| late competence protein ComEC [Bacillus sp. BT1B_CT2]
Length = 795
Score = 44.0 bits (102), Expect = 0.038, Method: Composition-based stats.
Identities = 31/219 (14%), Positives = 74/219 (33%), Gaps = 22/219 (10%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + ++ A+ + + + K I + + S I Q L A + ++
Sbjct: 325 FQAGFQLSFAVSFVFILSKEILT---------RPKSRISQLLLGSFLAQL------ASLP 369
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM----ILSLDNIPFGVMAWGLD 154
L+ HF + N+ IP+ F+++P ++L L V+ L
Sbjct: 370 ILLFHFQEFSFLSTLMNLFFIPLYIFIIMPLSFGSLLAFICFHPLG--EAAAAVLDRLLV 427
Query: 155 IIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
+S A + F + P+ L + + ++MI ++
Sbjct: 428 WSHQAVKTVSAADVSVFSAAKPPDLLLFFYFTAIFLFLLLLEKEMSLRAVMIPSGLLAAV 487
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIF 252
++ P L + ++ + +++ + +F
Sbjct: 488 FVIHACLPQLAGEGEVTMLDIGQGDSMYVSAPGQNGTVF 526
>gi|187478043|ref|YP_786067.1| competence protein [Bordetella avium 197N]
gi|115422629|emb|CAJ49154.1| putative competence protein [Bordetella avium 197N]
Length = 755
Score = 44.0 bits (102), Expect = 0.038, Method: Composition-based stats.
Identities = 30/225 (13%), Positives = 69/225 (30%), Gaps = 4/225 (1%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI-AILLMILSLDNIPF 146
+ L + + +AN LAIP +S V P L+ L+ + +
Sbjct: 340 TQMAVTLGLMPLLAFWVGEVSLVSPLANALAIPWVSLWVTPLALLTGALVWLPGAAWLGG 399
Query: 147 GVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI-RHIGSIMI 205
++ ++ + + P ++ + + R +G + I
Sbjct: 400 LAHESFAGLMWGLSWLAAWRWASLPVAAAPIYLLGLALMGVAWALQGRGWPSRWVGWVCI 459
Query: 206 GITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKS--ALITPF 263
++ P L + G A+V + + + W + L+ P+
Sbjct: 460 VPMLVWRPERPPEGGWRLAALDVGQGTAVVVETARHVLLYDTGPRHYRSWDAGERLVLPY 519
Query: 264 HEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRS 308
A + + D + + L M L + +S+ +
Sbjct: 520 LRARGIARLDHLVVSHADLDHAGGLMSLLTVLPVSRSWASFVLPA 564
>gi|315634139|ref|ZP_07889428.1| recombination protein 2 [Aggregatibacter segnis ATCC 33393]
gi|315477389|gb|EFU68132.1| recombination protein 2 [Aggregatibacter segnis ATCC 33393]
Length = 809
Score = 44.0 bits (102), Expect = 0.038, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ + F+ I + I N++A+P+ SF+++P L A+L + + D+
Sbjct: 395 TPIQLFFFNGISLNSFITNLIAVPLYSFILVPLVLFAVLT---QGSWNTWWLAN---DLA 448
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
I ++ + + IP + ++T+V+ L +
Sbjct: 449 EKITALLAPLQDHWLAISIPHSLWITLVLTCLFLGLL 485
>gi|300113155|ref|YP_003759730.1| DNA internalization-like competence protein ComEC/Rec2
[Nitrosococcus watsonii C-113]
gi|299539092|gb|ADJ27409.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosococcus watsonii C-113]
Length = 784
Score = 44.0 bits (102), Expect = 0.038, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIP-AGLIAILLMILSLDNIPFGVMAWGLDI 155
+ FL+ +F + + + N++A+P + F+V+P L A+LL+ L ++ L
Sbjct: 404 APFLLYYFQRLSLIAPVTNLVAVPWMGFLVVPPLLLGALLLIPFPLLGKALINLSDYLLA 463
Query: 156 IIH-IAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKT-NIRH 199
++ + + + P F+ ++ LL++ + R
Sbjct: 464 LLWSVLVWCAEPPAAQWEHTSPPLWLFLPAILGSLLLLAPRGLPGRW 510
>gi|258516435|ref|YP_003192657.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfotomaculum acetoxidans DSM 771]
gi|257780140|gb|ACV64034.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfotomaculum acetoxidans DSM 771]
Length = 789
Score = 44.0 bits (102), Expect = 0.038, Method: Composition-based stats.
Identities = 28/235 (11%), Positives = 75/235 (31%), Gaps = 35/235 (14%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + + G FY +P ++ + + + + +
Sbjct: 343 GFQLSFLATW------GIFYLVPAIVAFLQQKLGISKRMAA----------VLAVPLAAE 386
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG- 152
A + HF+ I + +AN++ +P++ + + + +LSL F +
Sbjct: 387 AVTLPPVALHFNLIALVAPLANVVCVPLVGAITL-FSALGTTAGLLSLSLTQFINITTAC 445
Query: 153 -LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF---CKTNI------RHIGS 202
LDI + + F P + + +++ + + R +
Sbjct: 446 LLDIFLWLVKLFQHLPGAFVHTAAPPVWAIILWYLLVILSVNKEWRGWLGRRLPDRMLRP 505
Query: 203 IMIGITIIILFTFPYSFSPDLLISEKGNLVA----LVDKNTLISNYSNPPSFIFS 253
+ + + + +F P L G L + ++++ + +
Sbjct: 506 AGVLLFVATMLSFSSGLHPANL---DGRLAVHFIDVGQGDSILLQTPAGKNILVD 557
>gi|298490271|ref|YP_003720448.1| comEC/Rec2-like protein ['Nostoc azollae' 0708]
gi|298232189|gb|ADI63325.1| ComEC/Rec2-related protein ['Nostoc azollae' 0708]
Length = 792
Score = 44.0 bits (102), Expect = 0.039, Method: Composition-based stats.
Identities = 33/223 (14%), Positives = 77/223 (34%), Gaps = 40/223 (17%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + I W I+S+ ++ +
Sbjct: 377 GFQLSFLATLALIV----------TATPITQRLDWIPPAIASL---------ISVPLAAT 417
Query: 94 ASASIFLIKHFHCIPVYGLIANILA---IPILSFVVIPAGLIAILLMILS--LDNIPFGV 148
L++ F + VY + +I+ I I+S + + L+++++ L L + +
Sbjct: 418 IWTVPLLLQIFSVVAVYSVPLSIITTLLISIVSIGSMISSLVSLIVPDLGSTLASFLYYP 477
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT---IVVEFLLMVFCKTNIRHIGSIMI 205
W + ++ A S+ + +G I V +++ ++ + + G I I
Sbjct: 478 THWLIQLVDFSA---SLPGSSVAVGSISTEQMVVIYGLIISTCMVRWWQQRWWFAGLIAI 534
Query: 206 GITII----------ILFTFPYSFSPDLLISEKGNLVALVDKN 238
+ II ++ P L+I +KG + + +
Sbjct: 535 VLVIIPVWHSANSLLLITLLATDKEPVLVIQDKGQVTLINSGD 577
>gi|290893843|ref|ZP_06556821.1| comEC [Listeria monocytogenes FSL J2-071]
gi|290556560|gb|EFD90096.1| comEC [Listeria monocytogenes FSL J2-071]
Length = 719
Score = 44.0 bits (102), Expect = 0.040, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NI 144
I + +S+ ++ HF+ G+ N++ +PI + +++P L +L S + +
Sbjct: 324 AISFISTIMSSVVMMYHFYSFSWVGIFFNLIYVPIFTIIILPGCLTVFVLSFFSTEIFHF 383
Query: 145 PFGVMAWGLDIIIHIAHRISVAH 167
P V+ + + ++ + + S
Sbjct: 384 PEAVLTFFIQLVEKLTYIFSNIP 406
>gi|283784739|ref|YP_003364604.1| competence-related protein [Citrobacter rodentium ICC168]
gi|282948193|emb|CBG87760.1| putative competence-related protein [Citrobacter rodentium ICC168]
Length = 754
Score = 44.0 bits (102), Expect = 0.040, Method: Composition-based stats.
Identities = 30/198 (15%), Positives = 73/198 (36%), Gaps = 18/198 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIP---AGLIAILLMILSLDNIPFGVMAWGLDIIIHIA 160
FH + + +AN+ A+P+++FV +P AG++A + L +++ + + L I+
Sbjct: 380 FHGVSLTSFMANLFAVPLVTFVSVPLILAGMVAHITGPLVVESGLWFLADRSLAILFW-- 437
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK-TNIRHIGSIMIGITIIILFTFPYSF 219
+ + + +LL++ + + R + + + +++ +
Sbjct: 438 ---GLEGLPHGWINVDVRWQWLTIAPWLLLIGWRFSAWRTAPGLCLALLVLLSWPLWRPQ 494
Query: 220 SPDL----LISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQ 275
D ++ L ++ +N Y P+ W P ++ DLQ
Sbjct: 495 RSDAWQVHMLDVGQGLAMVIARNGKALLYDTGPA-----WPEGDSAQQTIIPWLRWHDLQ 549
Query: 276 EKNQSSLKEILRSMQPRK 293
+ E L +
Sbjct: 550 PEGIILSHEHLDHRGGLR 567
>gi|229552127|ref|ZP_04440852.1| possible competence protein EC [Lactobacillus rhamnosus LMS2-1]
gi|258539540|ref|YP_003174039.1| hydrolase (Metallo-beta-lactamase superfamily) protein
[Lactobacillus rhamnosus Lc 705]
gi|229314560|gb|EEN80533.1| possible competence protein EC [Lactobacillus rhamnosus LMS2-1]
gi|257151216|emb|CAR90188.1| Hydrolase (Metallo-beta-lactamase superfamily) protein
[Lactobacillus rhamnosus Lc 705]
Length = 734
Score = 44.0 bits (102), Expect = 0.041, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 45/124 (36%), Gaps = 12/124 (9%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ H + + N L +PI ++IP + A+L+ L + + I+I
Sbjct: 351 PVIAWHTFSFNLLTVFFNWLLMPIFELIIIPGLVFALLMPHAGLTYLFNDALQLLETILI 410
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGIT-IIILFTFP 216
++H + IG P V V +L++ + + + ++L +
Sbjct: 411 RLSH----LPGQIIIGAFPSWLAVLGVFAMMLVLTWQCW-------PVAVGWFVVLALWS 459
Query: 217 YSFS 220
+
Sbjct: 460 WYQP 463
>gi|198244225|ref|YP_002214907.1| hypothetical protein SeD_A1048 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|197938741|gb|ACH76074.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Dublin str.
CT_02021853]
Length = 737
Score = 44.0 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 363 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 422
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I ++ +L ++ + N+ + + ++L ++P
Sbjct: 423 NAL-----PQGWVNIDNRWQWLTLLPWLTLIAWRLNV-WRTCPAVCLCGLLLMSWPLWRP 476
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 477 ----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLT 532
Query: 276 EKN 278
+
Sbjct: 533 PEG 535
>gi|224500499|ref|ZP_03668848.1| hypothetical protein LmonF1_12851 [Listeria monocytogenes Finland
1988]
Length = 740
Score = 44.0 bits (102), Expect = 0.042, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NI 144
+I + +S+ ++ HF+ G+ N++ +PI + +++P L +L S + +
Sbjct: 345 SISFISTIMSSVVMMYHFYSFSWEGIFFNLIYVPIFTIIILPGCLTVFVLSFFSAEIFHF 404
Query: 145 PFGVMAWGLDIIIHIAHRISVAH 167
P V+ + + ++ + + +
Sbjct: 405 PEVVLTFFIQLVEKLTYIFAKIP 427
>gi|213612694|ref|ZP_03370520.1| hypothetical protein SentesTyp_09409 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 445
Score = 44.0 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 65/185 (35%), Gaps = 22/185 (11%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 99 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 158
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLL--MVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+ ++ I + + + + + +T + + ++L ++P
Sbjct: 159 N--ALPQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTW------PAVCLCGLLLMSWPLW 210
Query: 219 FSPDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKED 273
I+ G V ++D L I W P ++ +
Sbjct: 211 RP----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHN 266
Query: 274 LQEKN 278
L +
Sbjct: 267 LTPEG 271
>gi|254229016|ref|ZP_04922437.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
sp. Ex25]
gi|262394759|ref|YP_003286613.1| putative hydrolase of the metallo-beta-lactamase superfamily
[Vibrio sp. Ex25]
gi|151938484|gb|EDN57321.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
sp. Ex25]
gi|262338353|gb|ACY52148.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio sp. Ex25]
Length = 752
Score = 44.0 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 59/166 (35%), Gaps = 12/166 (7%)
Query: 83 EIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--S 140
++ SA +F + + N+ IP F+V+P +A+ +
Sbjct: 361 KVLLLTQLMLSALIVPISGYYFSGFSLSSIAYNLAFIPWFGFIVVPLMFLALFSSLFLEM 420
Query: 141 LDNIPFGVMAWGLDII-IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRH 199
+ + ++ W L + I + I I I+ + +VF + ++
Sbjct: 421 IAKPLWQLVDWSLQPLSTSIQYAIGSWQ------AISIEMTGLILAGIICLVFQRFMFQY 474
Query: 200 IGSIMIGITIIILFTFPYSF---SPDLLISEKGNLVALVDKNTLIS 242
+++GI I I T Y D+L G V + + ++
Sbjct: 475 AWCLLLGIVISIKLTSEYDQQHWRIDVLDVGHGLAVIVEKDDKVLL 520
>gi|262408250|ref|ZP_06084797.1| competence protein [Bacteroides sp. 2_1_22]
gi|294643617|ref|ZP_06721420.1| ComEC/Rec2-like protein [Bacteroides ovatus SD CC 2a]
gi|294806134|ref|ZP_06764986.1| ComEC/Rec2-like protein [Bacteroides xylanisolvens SD CC 1b]
gi|298480268|ref|ZP_06998466.1| competence protein [Bacteroides sp. D22]
gi|262353802|gb|EEZ02895.1| competence protein [Bacteroides sp. 2_1_22]
gi|292641051|gb|EFF59266.1| ComEC/Rec2-like protein [Bacteroides ovatus SD CC 2a]
gi|294446648|gb|EFG15263.1| ComEC/Rec2-like protein [Bacteroides xylanisolvens SD CC 1b]
gi|298273549|gb|EFI15112.1| competence protein [Bacteroides sp. D22]
Length = 697
Score = 44.0 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 43/119 (36%), Gaps = 11/119 (9%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
++ + ++ +F V+ L+ N++ IP+++ ++ A ++ +LL +
Sbjct: 396 SVSVAAQIGTAPLVLFYFSRFSVHFLLTNLVVIPLITIILY-AAVVMLLLTPF--SWLQI 452
Query: 147 GVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF-------VTIVVEFLLMVFCKTNIR 198
GV G+ ++ + I + IV+ L F R
Sbjct: 453 GVAG-GVKKLLEGLNFFVRWVERLPCASIDGIWLYQSEVLGIYIVIALLTYYFMNRRYR 510
>gi|330995937|ref|ZP_08319832.1| ComEC/Rec2-like protein [Paraprevotella xylaniphila YIT 11841]
gi|329574276|gb|EGG55851.1| ComEC/Rec2-like protein [Paraprevotella xylaniphila YIT 11841]
Length = 621
Score = 44.0 bits (102), Expect = 0.046, Method: Composition-based stats.
Identities = 21/203 (10%), Positives = 64/203 (31%), Gaps = 32/203 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + + ++ F +P M W+ + I QS L A +
Sbjct: 282 GFQLSFLAMFGILTICPRFQELPLM----------QWRYVRWIFQSLLVSFAAQL----- 326
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVV--IPAGLIAILLMILSLDNIPFGVMAW 151
+ F Y A ++ P+ + ++ +P L++ + + + +
Sbjct: 327 -FTVPLVAYRFGTFSFYSAWATLVVSPLTALLIYGMPLILLSGITG-IGTTVCAWWIARV 384
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC-----KTNIRHIGSIMIG 206
G + + + + S + ++++ ++ R + ++
Sbjct: 385 GTWQNDSLRAMMEWPYAVVHT----DWSLWFTLWCYVVLCAWLMPFCRSYARRVQFGLMS 440
Query: 207 ITIIILFTFPYSF----SPDLLI 225
+ + + P+++
Sbjct: 441 VILTLCAFAVNRQFCRIRPEIVF 463
>gi|304312930|ref|YP_003812528.1| Predicted internalization-related competence protein ComEC/Rec2
[gamma proteobacterium HdN1]
gi|301798663|emb|CBL46895.1| Predicted internalization-related competence protein ComEC/Rec2
[gamma proteobacterium HdN1]
Length = 773
Score = 44.0 bits (102), Expect = 0.046, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 55/156 (35%), Gaps = 13/156 (8%)
Query: 77 KQSFLNEIRANIGTYGSASAS--IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL--- 131
+ L +RA G L F P +AN +AIP+L ++V+PA L
Sbjct: 391 RLWPLGAVRAWFLIQGGIFIGLIPLLAYAFGGFPWISPVANAVAIPLLGYLVVPAALAST 450
Query: 132 IAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP------ETSFVTIVV 185
++++M ++ W D ++ + + + VV
Sbjct: 451 FSLIVMP-AVSPYILKPSLWLADCLMWFLGWMERWGGAGYRVPMWSNPTQMALACSLAVV 509
Query: 186 EFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFS 220
L ++ + + I ++M+ + FP +
Sbjct: 510 ATLWVLAPRGAPGKWIATVMVLPVALGPGFFPRALP 545
>gi|312796699|ref|YP_004029621.1| DNA translocation competence protein ComA [Burkholderia rhizoxinica
HKI 454]
gi|312168474|emb|CBW75477.1| DNA translocation competence protein ComA [Burkholderia rhizoxinica
HKI 454]
Length = 939
Score = 44.0 bits (102), Expect = 0.046, Method: Composition-based stats.
Identities = 21/163 (12%), Positives = 60/163 (36%), Gaps = 4/163 (2%)
Query: 55 IPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA 114
+P+ + + + + + +R + + + + F IP G +A
Sbjct: 514 VPRSAKAFGALVARMRAAVRGMPTRLASAMR--VQWAVTLGLAPLTVVWFSQIPALGPVA 571
Query: 115 NILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH-NEFCIG 173
N +AIP +S +V+PA L+A + + D + + + I ++ + +
Sbjct: 572 NAIAIPWVSTLVVPAVLLA-IAIPAPFDALLLQWAHRLVQWLFAILDALAEPAWGVWYLP 630
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+ + +V M+ + + ++ + ++ +
Sbjct: 631 APEPAALLLALVGAAWMLGPRGWPLRAAAPILWLPLLWPASRA 673
>gi|229515260|ref|ZP_04404720.1| hypothetical protein VCB_002917 [Vibrio cholerae TMA 21]
gi|229347965|gb|EEO12924.1| hypothetical protein VCB_002917 [Vibrio cholerae TMA 21]
Length = 747
Score = 44.0 bits (102), Expect = 0.046, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 76/187 (40%), Gaps = 20/187 (10%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWG-- 152
+ F + V ++ N++ IP S V++PA + +LLM++ S+ + + W
Sbjct: 371 APVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVVWPSVAAAYWPWVDWSFL 430
Query: 153 -LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
LD + A G + + + ++ F+ + C + + ++
Sbjct: 431 PLDWALQFADVGWWVVPSKVQGVVAASVAILLLYRFMSLKACS----------LLLGMMG 480
Query: 212 LFTFPYSFSP----DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
L+ + S +P D+L G L +++++ Y S+ + ++I P +
Sbjct: 481 LWWWFPSLTPLWRMDVLDVGHG-LAIVIEQDERAIVYDTGSSWPGGSYVQSVIEPILQQR 539
Query: 268 HVQKEDL 274
+++ D
Sbjct: 540 GLRQVDG 546
>gi|288799889|ref|ZP_06405348.1| ComEC/Rec2 family protein [Prevotella sp. oral taxon 299 str.
F0039]
gi|288333137|gb|EFC71616.1| ComEC/Rec2 family protein [Prevotella sp. oral taxon 299 str.
F0039]
Length = 504
Score = 43.6 bits (101), Expect = 0.047, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D +F + +S +G F P + +++ ++I + + A IG
Sbjct: 336 LWDVSFQMSF--LSVLGIFLFYPLFTFCLRPASSFLGSFFNAIIKMMAVSLSAQIGV--- 390
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG- 152
+ ++ +F P Y L ANI+A+P VV+ L+A+L +L I +A G
Sbjct: 391 ---APLVLYYFGGFPTYFLFANIIAVPAF-IVVVYIVLVALLGSVLYGKIIVLMTIACGL 446
Query: 153 LDIIIHIAHRISVAHNEF 170
+D + + IS F
Sbjct: 447 IDKLNAVLRWISELPYAF 464
>gi|213650538|ref|ZP_03380591.1| hypothetical protein SentesTy_26863 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
Length = 536
Score = 43.6 bits (101), Expect = 0.047, Method: Composition-based stats.
Identities = 28/185 (15%), Positives = 65/185 (35%), Gaps = 22/185 (11%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 162 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 221
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLL--MVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+ ++ I + + + + + +T + + ++L ++P
Sbjct: 222 N--ALPQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTW------PAVCLCGLLLMSWPLW 273
Query: 219 FSPDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKED 273
I+ G V ++D L I W P ++ +
Sbjct: 274 RP----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHN 329
Query: 274 LQEKN 278
L +
Sbjct: 330 LTPEG 334
>gi|297579398|ref|ZP_06941326.1| ComEC/rec2 family protein [Vibrio cholerae RC385]
gi|297536992|gb|EFH75825.1| ComEC/rec2 family protein [Vibrio cholerae RC385]
Length = 752
Score = 43.6 bits (101), Expect = 0.048, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 73/187 (39%), Gaps = 20/187 (10%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-----SLDNIPFGVMAW 151
+ F + V ++ N++ IP S V++PA + +LLM++ +
Sbjct: 376 APVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVVWPSVAAAYWPWVDWTFL 435
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
LD + A G + + + ++ F+ + C + ++++
Sbjct: 436 PLDWALQFADVGWWVVPSKVQGVVAASVVILLLYRFMSLKACS----------LLLSMMG 485
Query: 212 LFTFPYSFSP----DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
L+ + S +P D+L G L +++++ Y S+ + ++I P +
Sbjct: 486 LWWWFPSLTPLWRMDVLDVGHG-LAIVIEQDERAIVYDTGSSWPGGSYVQSVIEPILQQR 544
Query: 268 HVQKEDL 274
+++ D
Sbjct: 545 GLRQVDG 551
>gi|126657157|ref|ZP_01728323.1| ComEC/Rec2-related protein [Cyanothece sp. CCY0110]
gi|126621428|gb|EAZ92139.1| ComEC/Rec2-related protein [Cyanothece sp. CCY0110]
Length = 748
Score = 43.6 bits (101), Expect = 0.048, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 24/134 (17%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + + + S E+ + KISS+ + S
Sbjct: 359 GFQLSFLATFALLV----------TSPSIENKLDFLPPKISSM---------IAVPVAVS 399
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI---LSLDNIPFGVMA 150
S ++ FH Y + NILA P++ +VI + AI L+I ++ +
Sbjct: 400 IWTSPLIMYVFHTFSFYIIPFNILATPLIILLVIGGMISAIFLLIFPVFGVE--IAKFLF 457
Query: 151 WGLDIIIHIAHRIS 164
W L+I++H A +I+
Sbjct: 458 WPLEILLHSAKQIT 471
>gi|169829292|ref|YP_001699450.1| ComE operon protein 3 [Lysinibacillus sphaericus C3-41]
gi|168993780|gb|ACA41320.1| ComE operon protein 3 [Lysinibacillus sphaericus C3-41]
Length = 718
Score = 43.6 bits (101), Expect = 0.049, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 45/100 (45%), Gaps = 8/100 (8%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAW-----G 152
L+ HF+ + + NI+ +P+ SFV++P ++A+ L +SL + G
Sbjct: 318 PLLLHHFYELSISSFFVNIIFVPLFSFVILPFNIVALALTYISLPLANLLFAGYEPLRNG 377
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
L +I++ ++ + G+ P + + +L F
Sbjct: 378 LTNVIYLIQ--ALPFQLWSPGK-PSVWLCCLAMLSVLTCF 414
>gi|16272035|ref|NP_438234.1| recombination protein [Haemophilus influenzae Rd KW20]
gi|260580635|ref|ZP_05848462.1| recombination protein 2 [Haemophilus influenzae RdAW]
gi|1172877|sp|P44408|REC2_HAEIN RecName: Full=Recombination protein 2
gi|1573009|gb|AAC21739.1| recombination protein (rec2) [Haemophilus influenzae Rd KW20]
gi|260092697|gb|EEW76633.1| recombination protein 2 [Haemophilus influenzae RdAW]
Length = 788
Score = 43.6 bits (101), Expect = 0.049, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 37/97 (38%), Gaps = 5/97 (5%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ + F+ + + G +AN +A+PI SF+++P L A+ +A G+ +
Sbjct: 382 TPLQLFLFNGLSLSGFLANFMAVPIYSFLLVPLILFAVFTNGTMFSWQLANKLAEGITGL 441
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
I + + + + +++
Sbjct: 442 ISVFQGNWL-----TVSFNLALGLTALCAGIFMLIIW 473
>gi|169832210|ref|YP_001718192.1| DNA internalization-related competence protein ComEC/Rec2
[Candidatus Desulforudis audaxviator MP104C]
gi|169639054|gb|ACA60560.1| DNA internalization-related competence protein ComEC/Rec2
[Candidatus Desulforudis audaxviator MP104C]
Length = 818
Score = 43.6 bits (101), Expect = 0.049, Method: Composition-based stats.
Identities = 15/183 (8%), Positives = 54/183 (29%), Gaps = 18/183 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ + + + + + W+ + ++
Sbjct: 343 GFQLSFTATWGILYLGPVIVRGLDKLAAGWRLSWWSPAAGWFLAVPLAAQL--------- 393
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWG 152
+ +++ I L+AN++ +P++ + + + A+L L + +
Sbjct: 394 -GTLPLIAYYYNLISPVSLLANVVTVPLVGLIFVLGFITALLGAFLPAAAWLTGPATGVL 452
Query: 153 LDIIIHIAHRISVAHNEFCIGRIP------ETSFVTIVVEFL-LMVFCKTNIRHIGSIMI 205
+D+ + + + + P + F + +++
Sbjct: 453 IDLFLALVKFFAGLKGAYYYVPTPSLLLVGSWYLACWGLGFFAGPTPWRERWPGAAALVG 512
Query: 206 GIT 208
G
Sbjct: 513 GSG 515
>gi|89092892|ref|ZP_01165844.1| DNA internalization-related competence protein [Oceanospirillum sp.
MED92]
gi|89082917|gb|EAR62137.1| DNA internalization-related competence protein [Oceanospirillum sp.
MED92]
Length = 743
Score = 43.6 bits (101), Expect = 0.050, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 73/210 (34%), Gaps = 28/210 (13%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKK 72
I +ARL PP G P FD+ + +GI+A+GY I + + S
Sbjct: 135 IGQEISLVARLKPPHGQVNPKNFDYEKWLFARGINAVGYVRQITRAERNGGSVADIARHW 194
Query: 73 ISS-IKQSFLNEIRANI-GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
I+ I F N+ + + + ++ ++ + G + ++ I L +
Sbjct: 195 INQTIVNQFKNQQVQGLYQAISTGNTNLLTSDNWETLKQTGTV-HLAVISGLHIGFMA-- 251
Query: 131 LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT------IV 184
+ + + W L + ++ + G + + F I+
Sbjct: 252 ------------GMGWIIGMWVLRRLPSVSSMPYLLSISLAAGYLAISGFGLPAQRAFIM 299
Query: 185 VEFLLMVFCKT-----NIRHIGSIMIGITI 209
V LL+ + R ++++ + I
Sbjct: 300 VTVLLLTSWRGHFIDHWTRWWIALVVVLLI 329
>gi|309972805|gb|ADO96006.1| Recombination protein Rec2 [Haemophilus influenzae R2846]
Length = 788
Score = 43.6 bits (101), Expect = 0.050, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 47/127 (37%), Gaps = 7/127 (5%)
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
W + S + L+ ++ + + F+ + + G +AN++A+PI SF+++
Sbjct: 355 WKNRPFSPKVRWILSLF--HLQFGLLLFFTPLQLFLFNGLSLSGFLANLMAVPIYSFLLV 412
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF 187
P L A+ +A G +I + N F + +
Sbjct: 413 PLILFAVFTNGTMFSWQLANKLAEGSTGLISV-----FQGNWFNVSFNLALVLTALCAGI 467
Query: 188 LLMVFCK 194
+++ +
Sbjct: 468 FMLIIWR 474
>gi|229846981|ref|ZP_04467087.1| recombination protein 2 [Haemophilus influenzae 7P49H1]
gi|229810065|gb|EEP45785.1| recombination protein 2 [Haemophilus influenzae 7P49H1]
Length = 788
Score = 43.6 bits (101), Expect = 0.050, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 47/127 (37%), Gaps = 7/127 (5%)
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
W + S + L+ ++ + + F+ + + G +AN++A+PI SF+++
Sbjct: 355 WKNRPFSPKVRWILSLF--HLQFGLLLFFTPLQLFLFNGLSLSGFLANLMAVPIYSFLLV 412
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF 187
P L A+ +A G +I + N F + +
Sbjct: 413 PLILFAVFTNGTMFSWQLANKLAEGSTGLISV-----FQGNWFNVSFNLALVLTALCAGI 467
Query: 188 LLMVFCK 194
+++ +
Sbjct: 468 FMLIIWR 474
>gi|126653875|ref|ZP_01725722.1| late competence protein ComEC [Bacillus sp. B14905]
gi|126589600|gb|EAZ83739.1| late competence protein ComEC [Bacillus sp. B14905]
Length = 445
Score = 43.6 bits (101), Expect = 0.052, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL--MILSLDNIPFGVMAWGLDI 155
L+ HF+ + + NI+ +P+ SFV++P ++A++L + L L N+ F +
Sbjct: 316 PLLLHHFYELSISSFFVNIIFVPLFSFVILPFNMVALVLTYISLPLANLLFACYEPLRNG 375
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+ ++ I + P + + +L F + G ++ + I ++
Sbjct: 376 LTNVIFSIQALPFQLWSPGKPSIWLCCLAMLSVLACFYFLETKRFGHAIVVLVIPAIWIH 435
Query: 216 PYSFSPDLLISE 227
Y P L++++
Sbjct: 436 VY---PMLIVTQ 444
>gi|315126709|ref|YP_004068712.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudoalteromonas sp. SM9913]
gi|315015224|gb|ADT68562.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudoalteromonas sp. SM9913]
Length = 755
Score = 43.6 bits (101), Expect = 0.052, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+ F+ + + GL+ N++AIPILSFV++PA
Sbjct: 392 PLSLYFFNGVSLAGLVLNLVAIPILSFVLMPA 423
>gi|238893969|ref|YP_002918703.1| putative recombination protein with metallo-hydrolase domain
[Klebsiella pneumoniae NTUH-K2044]
gi|238546285|dbj|BAH62636.1| putative recombination protein with metallo-hydrolase domain
[Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
Length = 807
Score = 43.6 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 62/126 (49%), Gaps = 19/126 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
FH I + + AN+LA+P+++ + +P + + M++ L ++ ++ +A
Sbjct: 433 FHGISLTSMAANLLAVPLVTLLAVP---LILTAMLVHLSGPEL------VESLLWLAADR 483
Query: 164 SVAHNEFCIGRIPETSFVT-------IVVEFLLMVFCK-TNIRHIGSIMIGITIIILFTF 215
+A + + R+P+ + ++ +LL++ + + RH S + ++++ L T
Sbjct: 484 VLALLFWGLRRLPDGWLMLDTRWLWISILPWLLVMGWRFQSWRH--SPALCLSVLFLLTR 541
Query: 216 PYSFSP 221
P+S P
Sbjct: 542 PFSRQP 547
>gi|229523898|ref|ZP_04413303.1| hypothetical protein VCA_001477 [Vibrio cholerae bv. albensis
VL426]
gi|229337479|gb|EEO02496.1| hypothetical protein VCA_001477 [Vibrio cholerae bv. albensis
VL426]
Length = 747
Score = 43.6 bits (101), Expect = 0.053, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 73/187 (39%), Gaps = 20/187 (10%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-----SLDNIPFGVMAW 151
+ F + V ++ N++ IP S V++PA + +LLM++ +
Sbjct: 371 APVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVVWPSVAAAYWPWVDWTFL 430
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
LD + A G + + + ++ F+ + C + ++++
Sbjct: 431 PLDWALQFADVGWWVVPSKVQGVVAASVVILLLYRFMSLKACS----------LLLSMMG 480
Query: 212 LFTFPYSFSP----DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
L+ + S +P D+L G L +++++ Y S+ + ++I P +
Sbjct: 481 LWWWFPSLTPLWRMDVLDVGHG-LAIVIEQDERAIVYDTGSSWPGGSYVQSVIEPILQQR 539
Query: 268 HVQKEDL 274
+++ D
Sbjct: 540 GLRQVDG 546
>gi|205352190|ref|YP_002225991.1| hypothetical protein SG0925 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205271971|emb|CAR36815.1| putative competence-related protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|326627234|gb|EGE33577.1| DNA internalization-related competence protein ComEC/Rec2
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 9]
Length = 754
Score = 43.6 bits (101), Expect = 0.054, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 66/183 (36%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 380 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 439
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I ++ +L ++ + N+ + + ++L ++P
Sbjct: 440 NAL-----PQGWVNIENRWQWLTLLPWLTLIAWRLNV-WHTCPAVCLCGLLLMSWPLWRP 493
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 494 ----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLT 549
Query: 276 EKN 278
+
Sbjct: 550 PEG 552
>gi|30250333|ref|NP_842403.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosomonas europaea ATCC 19718]
gi|30181128|emb|CAD86320.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosomonas europaea ATCC 19718]
Length = 799
Score = 43.6 bits (101), Expect = 0.054, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F I + IAN +AIP++SF+++P L+A + L+ + L I + + +
Sbjct: 409 FQQISLISPIANAVAIPVISFIIVPLALLATIP---GLEFLLLIAHPV-LQITMGVLQWL 464
Query: 164 SVAHNE-FCIGRIPETSFVTIVVEFLL 189
+ P + + + +
Sbjct: 465 GELPLATWQQQAPPLWAVIAATLGVVW 491
>gi|113477315|ref|YP_723376.1| ComEC/Rec2-like protein [Trichodesmium erythraeum IMS101]
gi|110168363|gb|ABG52903.1| ComEC/Rec2-related protein [Trichodesmium erythraeum IMS101]
Length = 816
Score = 43.6 bits (101), Expect = 0.054, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 64/163 (39%), Gaps = 25/163 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + +G ++P + K+++ + A I S
Sbjct: 392 GFQLSFLAT------LGLLVTLPPLT-----------KRLNMLPSGIAY--LAAIYISAS 432
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM--AW 151
L+ F+ + Y ++ NI+ P+++ + + G I+ +L ++ D M +
Sbjct: 433 VWVLPLLLSVFYVVSPYAILVNIIVAPLVTVITV-GGFISAMLALIYPDAGSLSAMILHF 491
Query: 152 GLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
+ I+I I S + N+ +G I + + +V+ L+
Sbjct: 492 PVKILIEIVQFFSRLPGNQVAVGAI--SVYQLVVLYGLIFTTW 532
>gi|116749151|ref|YP_845838.1| DNA internalization-related competence protein ComEC/Rec2
[Syntrophobacter fumaroxidans MPOB]
gi|116698215|gb|ABK17403.1| DNA internalization-related competence protein ComEC/Rec2
[Syntrophobacter fumaroxidans MPOB]
Length = 846
Score = 43.6 bits (101), Expect = 0.055, Method: Composition-based stats.
Identities = 26/189 (13%), Positives = 75/189 (39%), Gaps = 5/189 (2%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+ +F Y + A+ Y + + H + +++ E ++ +
Sbjct: 376 LWQVSFQLTYACMVALFVIYPRLQRCRLAAIHPVFGGDRMAGKITRPFEEAF-HVSVAVN 434
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +F + G IANI+ +P++ F+V+P+GL+ + L+ + +++ ++ +G
Sbjct: 435 ILVLPLTVFYFQGFSLAGFIANIILVPLVGFLVLPSGLLGLGLLAFN-ESLAALLLQFGA 493
Query: 154 DIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI--RHIGSIMIGITII 210
+ H I + + + S + + +L + + + G+ + + +
Sbjct: 494 WWVTLAHHLIRWFSDLSWAYFHVGPFSLLGMAACYLALFVLLSPWHRKRKGAALCALALF 553
Query: 211 ILFTFPYSF 219
+ +
Sbjct: 554 MAADSAVAH 562
>gi|325920379|ref|ZP_08182310.1| DNA internalization-related competence protein ComEC/Rec2
[Xanthomonas gardneri ATCC 19865]
gi|325549126|gb|EGD20049.1| DNA internalization-related competence protein ComEC/Rec2
[Xanthomonas gardneri ATCC 19865]
Length = 798
Score = 43.6 bits (101), Expect = 0.057, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 38/112 (33%), Gaps = 3/112 (2%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNI 144
+ T + + F G AN++AIP +FVV+P L+ L L
Sbjct: 397 SAQTVATVGLLPLTVSLFGQASFVGPFANLVAIPWWTFVVVPLALLGTALEALHPGAGVW 456
Query: 145 PFGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + W ++ + + + + V ++ ++ +
Sbjct: 457 AWRLAGWCFELTWPGFVWLGQTSVALWWVPESDAIALVLALLGAFWLLLPRG 508
>gi|307249980|ref|ZP_07531952.1| hypothetical protein appser4_7760 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306858040|gb|EFM90124.1| hypothetical protein appser4_7760 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 729
Score = 43.6 bits (101), Expect = 0.058, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 65/166 (39%), Gaps = 8/166 (4%)
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++K I + L I ++ + F I + L AN++ +P+ SFV
Sbjct: 314 RKFAYRKWGKIVRFCLGLI--HLQCGILLIFTPVQFFFFEGISLTALPANLVIVPLYSFV 371
Query: 126 VIPAGLIAILLMI-LSLDNIPFGVMAWGLDIIIHIA-HRISVAHNEFCIGRIPETSFVTI 183
++P LI +L + + ++ + LD + I+ I ++H + I + + + I
Sbjct: 372 LVPLVLIGLLTDNGFNTWQLANRLIGYSLDYLETISQQWIWLSHRQQAQWLIIDLAILFI 431
Query: 184 VVEFLLMVFCKTNIRHI-GSIMIGITIIILFTFPYSFSPDLLISEK 228
+ L +T + ++ + + F P I+
Sbjct: 432 LYGILHA---RTALYWYKRYALLLCCQCVFYLFQLDKVPLQWITFD 474
>gi|229529098|ref|ZP_04418488.1| hypothetical protein VCG_002191 [Vibrio cholerae 12129(1)]
gi|229332872|gb|EEN98358.1| hypothetical protein VCG_002191 [Vibrio cholerae 12129(1)]
Length = 747
Score = 43.6 bits (101), Expect = 0.058, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 72/187 (38%), Gaps = 20/187 (10%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-----SLDNIPFGVMAW 151
+ F + V ++ N++ IP S V++PA + +LLM++ +
Sbjct: 371 APVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVVWPSVAAAYWPWVDWTFL 430
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
LD + A G + + + ++ F+ + C + + ++
Sbjct: 431 PLDWALQFADVGWWVVPSKVQGVVAASVAILLLYRFMSLKACS----------LLLGMMG 480
Query: 212 LFTFPYSFSP----DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
L+ + S +P D+L G L +++++ Y S+ + ++I P +
Sbjct: 481 LWWWFPSLTPLWRMDVLDVGHG-LAIVIEQDERAIVYDTGSSWPGGSYVQSVIEPILQQR 539
Query: 268 HVQKEDL 274
+++ D
Sbjct: 540 GLRQVDG 546
>gi|307256790|ref|ZP_07538569.1| hypothetical protein appser10_7930 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306864838|gb|EFM96742.1| hypothetical protein appser10_7930 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 729
Score = 43.6 bits (101), Expect = 0.059, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 65/166 (39%), Gaps = 8/166 (4%)
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++K I + L I ++ + F I + L AN++ +P+ SFV
Sbjct: 314 RKFAYRKWGKIVRFCLGLI--HLQCGILLIFTPVQFFFFEGISLTALPANLVIVPLYSFV 371
Query: 126 VIPAGLIAILLMI-LSLDNIPFGVMAWGLDIIIHIA-HRISVAHNEFCIGRIPETSFVTI 183
++P LI +L + + ++ + LD + I+ I ++H + I + + + I
Sbjct: 372 LVPLVLIGLLTDNGFNTWQLANRLIGYSLDYLETISQQWIWLSHRQQAQWLIIDLAILFI 431
Query: 184 VVEFLLMVFCKTNIRHI-GSIMIGITIIILFTFPYSFSPDLLISEK 228
+ L +T + ++ + + F P I+
Sbjct: 432 LYGILHA---RTALYWYKRYALLLCCQCVFYLFQLDKVPLQWITFD 474
>gi|221129522|ref|XP_002160469.1| PREDICTED: similar to Sex comb on midleg-like protein 1 [Hydra
magnipapillata]
Length = 756
Score = 43.6 bits (101), Expect = 0.059, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 32/109 (29%), Gaps = 11/109 (10%)
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
P+ +P G L L + V AWGL ++ ++ ++ + +
Sbjct: 216 PVSGIETMP-GPQTQDLGAWGLQWLVDFVTAWGLQWLV---DFVTAWGLQWLVDFVTAWG 271
Query: 180 F-----VTIVVEFLLMVFCKTNIR--HIGSIMIGITIIILFTFPYSFSP 221
+V T + + + L FP +P
Sbjct: 272 LQWLVDFVTAWGLQWLVDFVTAWGLQWLVDFVTAWGLQWLVDFPQLSTP 320
>gi|332877536|ref|ZP_08445283.1| ComEC/Rec2-like protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332684642|gb|EGJ57492.1| ComEC/Rec2-like protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 705
Score = 43.6 bits (101), Expect = 0.059, Method: Composition-based stats.
Identities = 24/203 (11%), Positives = 62/203 (30%), Gaps = 32/203 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + + ++ F +P M W+ + I QS L A +
Sbjct: 366 GFQLSFLAMFGILTICPRFQELPLMR----------WRYVRWIFQSLLVSFAAQL----- 410
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVV--IPAGLIAILLMILSLDNIPFGVMAW 151
+ F Y A ++ P+ + ++ +P L++ + + + +
Sbjct: 411 -FTVPLVAYRFGTFSFYSAWATLVISPLTALLIYGMPLILLSGITG-IGTTVCAWWIARL 468
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK-------TNIRHIGSIM 204
G + + + + S V ++++ T G +
Sbjct: 469 GTWQNDCLRAMMEWPYAVIHT----DWSLWFTVWCYVVLCVWVMPFCRSYTRRVQFGLMS 524
Query: 205 IGITIIILFTFPY--SFSPDLLI 225
+ +T+ P+++
Sbjct: 525 VILTLCAFAVNRQFCRIRPEIVF 547
>gi|307245626|ref|ZP_07527712.1| hypothetical protein appser1_8290 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306853328|gb|EFM85547.1| hypothetical protein appser1_8290 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
Length = 729
Score = 43.6 bits (101), Expect = 0.059, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 65/166 (39%), Gaps = 8/166 (4%)
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++K I + L I ++ + F I + L AN++ +P+ SFV
Sbjct: 314 RKFAYRKWGKIVRFCLGLI--HLQCGILLIFTPVQFFFFEGISLTALPANLVIVPLYSFV 371
Query: 126 VIPAGLIAILLMI-LSLDNIPFGVMAWGLDIIIHIA-HRISVAHNEFCIGRIPETSFVTI 183
++P LI +L + + ++ + LD + I+ I ++H + I + + + I
Sbjct: 372 LVPLVLIGLLTDNGFNTWQLANRLIGYSLDYLETISQQWIWLSHRQQAQWLIIDLAILFI 431
Query: 184 VVEFLLMVFCKTNIRHI-GSIMIGITIIILFTFPYSFSPDLLISEK 228
+ L +T + ++ + + F P I+
Sbjct: 432 LYGILHA---RTALYWYKRYALLLCCQCVFYLFQLDKVPLQWITFD 474
>gi|299535732|ref|ZP_07049053.1| ComE operon protein 3 [Lysinibacillus fusiformis ZC1]
gi|298728932|gb|EFI69486.1| ComE operon protein 3 [Lysinibacillus fusiformis ZC1]
Length = 758
Score = 43.6 bits (101), Expect = 0.059, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 50/122 (40%), Gaps = 6/122 (4%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD--- 154
L+ HF+ + + NI+ +P+ SFV++P +IA +L LSL V+ G +
Sbjct: 358 PLLLHHFYELSLSSFFVNIVFVPLFSFVILPFNMIAFVLSYLSL--PLANVLFAGYEPLR 415
Query: 155 -IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
+ I + + P + + +L+ F I+ ++ + I ++
Sbjct: 416 KWLTEIIFSMQELPWQLWTPGKPTIWLSCVAMLSVLVSFYYLEIKRFRRAILILVIPAIW 475
Query: 214 TF 215
Sbjct: 476 IH 477
>gi|305386|gb|AAC13733.1| recombination protein [Haemophilus influenzae]
Length = 800
Score = 43.6 bits (101), Expect = 0.059, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 37/97 (38%), Gaps = 5/97 (5%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ + F+ + + G +AN +A+PI SF+++P L A+ +A G+ +
Sbjct: 382 TPLQLFLFNGLSLSGFLANFMAVPIYSFLLVPLILFAVFTNGTMFSWQLANKLAEGITGL 441
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
I + + + + +++
Sbjct: 442 ISVFQGNWL-----TVSFNLALGLTALCAGIFMLIIW 473
>gi|307259038|ref|ZP_07540768.1| hypothetical protein appser11_8360 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307263430|ref|ZP_07545046.1| hypothetical protein appser13_8470 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|306866705|gb|EFM98563.1| hypothetical protein appser11_8360 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306871308|gb|EFN03036.1| hypothetical protein appser13_8470 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 729
Score = 43.6 bits (101), Expect = 0.060, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 65/166 (39%), Gaps = 8/166 (4%)
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++K I + L I ++ + F I + L AN++ +P+ SFV
Sbjct: 314 RKFAYRKWGKIVRFCLGLI--HLQCGILLIFTPVQFFFFEGISLTALPANLVIVPLYSFV 371
Query: 126 VIPAGLIAILLMI-LSLDNIPFGVMAWGLDIIIHIA-HRISVAHNEFCIGRIPETSFVTI 183
++P LI +L + + ++ + LD + I+ I ++H + I + + + I
Sbjct: 372 LVPLVLIGLLTDNGFNTWQLANRLIGYSLDYLETISQQWIWLSHRQQAQWLIIDLAILFI 431
Query: 184 VVEFLLMVFCKTNIRHI-GSIMIGITIIILFTFPYSFSPDLLISEK 228
+ L +T + ++ + + F P I+
Sbjct: 432 LYGILHA---RTALYWYKRYALLLCCQCVFYLFQLDKVPLQWITFD 474
>gi|116330395|ref|YP_800113.1| competence protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
gi|116124084|gb|ABJ75355.1| Competence protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
Length = 697
Score = 43.6 bits (101), Expect = 0.060, Method: Composition-based stats.
Identities = 20/164 (12%), Positives = 65/164 (39%), Gaps = 16/164 (9%)
Query: 32 PGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTY 91
PG + +F + ++ I + +S P I + + + + S +K++ A +GT
Sbjct: 246 PGFYTVSFCLSFGAVAGI-FLFSYP--IQVACNFLSDENRITSFLKENLSISFSAGLGTM 302
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL---DNIPFGV 148
+ F ++ N++ +P+ ++ P ++++ + L + +
Sbjct: 303 PVLLFA------FGSFSFGSILLNLIVVPLTGILL-PILYFSLIIQKIKLTFFAEPFWSI 355
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
+ ++I+++ +S + + + ++ + L+
Sbjct: 356 TELLIQMLIYLSETLSQSLGFYKER---GDAIWIGIIGWFLLCV 396
>gi|87118938|ref|ZP_01074836.1| DNA internalization-related competence protein [Marinomonas sp.
MED121]
gi|86165329|gb|EAQ66596.1| DNA internalization-related competence protein [Marinomonas sp.
MED121]
Length = 610
Score = 43.6 bits (101), Expect = 0.060, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 74/193 (38%), Gaps = 30/193 (15%)
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ ++K F+ + A G ++ I ++ N+L +P+ +F+ P
Sbjct: 314 HLLQTMKLQFILTLCATTLILGWQAS----------ISSGSVLINLLVLPLTAFLWFPVA 363
Query: 131 LIAILLMIL--------SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
++A + +L LD + + W + + + + + V
Sbjct: 364 ILASVESLLLHTVYLMSGLDYVLVAALGW-------LEASVYLFPSLLLKSGLLLYFKVL 416
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+ + FLL V + +R I + +IILF D+L+ + ++V++ ++ +
Sbjct: 417 LYLVFLLWVIYRHRVRSWVFFPILVLLIILFG-----PIDVLVKKDKSVVSVAHQSGSLM 471
Query: 243 NYSNPPSFIFSQW 255
+ + S W
Sbjct: 472 LDNGVEPQLSSLW 484
>gi|107028709|ref|YP_625804.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia cenocepacia AU 1054]
gi|116690132|ref|YP_835755.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia cenocepacia HI2424]
gi|105897873|gb|ABF80831.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia cenocepacia AU 1054]
gi|116648221|gb|ABK08862.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia cenocepacia HI2424]
Length = 829
Score = 43.6 bits (101), Expect = 0.060, Method: Composition-based stats.
Identities = 28/219 (12%), Positives = 72/219 (32%), Gaps = 9/219 (4%)
Query: 30 AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR---- 85
F +F + + A+ + ++ ++ E+ + S + + R
Sbjct: 368 VLSAGFWLSFGAVAVILLAVAGWRAVREVDDIDEAGAEGGMTGLRSRLRGWATRGRHRLA 427
Query: 86 --ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
+ + + F + + G N AIP +S VV P ++A + + LD
Sbjct: 428 EATRVQYAVTIGLAPLTAAWFAQVSLSGPFGNAFAIPWVSSVVTPV-VLAGIALPPPLDA 486
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIV-VEFLLMVFCKTN-IRHIG 201
F + L ++ + ++ R+P+ + + V + + +R
Sbjct: 487 AAFRLAHAALAPMMTLLGHLADWPAGVFWLRMPDWPVLALACVGVAWALMPRGWPLRWAA 546
Query: 202 SIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ + P + + + G A++ +
Sbjct: 547 PLTWLPLVAPAPDAPPPGGFRMTVLDVGQGAAVLVETAR 585
>gi|222055709|ref|YP_002538071.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacter sp. FRC-32]
gi|221564998|gb|ACM20970.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacter sp. FRC-32]
Length = 803
Score = 43.2 bits (100), Expect = 0.061, Method: Composition-based stats.
Identities = 24/181 (13%), Positives = 65/181 (35%), Gaps = 24/181 (13%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ ++ +P + + L+ G F F +F + + I I +
Sbjct: 328 LAVEREVEPVN-SLLLAAMVILAVTPGALFDISFQLSFVALWGII------------ILT 374
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ +I L + A++ + +FH + GLI+N++ +P+
Sbjct: 375 PIFMLPFARFASGTISYKLLLFLMASLAAITGTLFPV--AFYFHRVSFTGLISNLIVVPL 432
Query: 122 LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN-EFCIGRIPETSF 180
+ + + ++ + + M +++ A + +A++ + IP
Sbjct: 433 MGYGAV---VLGFMALPFIFLFPFVARM-----LLVAAAFPVKIANSFVLLVSNIPALPL 484
Query: 181 V 181
+
Sbjct: 485 L 485
Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 47/143 (32%), Gaps = 7/143 (4%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY 60
+L + + + ++RL P PG F+F + KGI A + ++
Sbjct: 132 LLYVGEGRPDVFTGDRVRVVSRLHRPRNYGLPGEFNFVRNLALKGIFATAFASRADDVVL 191
Query: 61 SSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA------ 114
+ + + I + I + + LI P Y A
Sbjct: 192 VMANVSHPLQRFIDQTAAGMGSFIVKAVPSVEGGILRALLIGERGYTPPYIETAYANTGV 251
Query: 115 -NILAIPILSFVVIPAGLIAILL 136
+IL+I +I + +LL
Sbjct: 252 NHILSISGFHVGIIALFVFHLLL 274
>gi|218710043|ref|YP_002417664.1| hypothetical protein VS_2063 [Vibrio splendidus LGP32]
gi|218323062|emb|CAV19239.1| hypothetical Rec2-related protein [Vibrio splendidus LGP32]
Length = 776
Score = 43.2 bits (100), Expect = 0.062, Method: Composition-based stats.
Identities = 35/191 (18%), Positives = 71/191 (37%), Gaps = 19/191 (9%)
Query: 40 SSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIF 99
SS++ A+G I SS+S+ T+ + + K I + + F
Sbjct: 327 SSFWLSFGALGAVLYIALNSQSSDSNPTFIDRALQLFK----------IQLMLTFLIAPF 376
Query: 100 LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA----ILLMILSLDNIPFGVMAWGLDI 155
+ F+ + + + N+L +P +S VVIP +A ++L +S + GL
Sbjct: 377 SMLFFNGVSLVSVFYNLLLLPWVSMVVIPLLFLAMFFSLILAPVS-GGVGLTTFNNGLSE 435
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVT----IVVEFLLMVFCKTNIRHIGSIMIGITIII 211
+ + +S+ F + F I + L++F R+ + + I +
Sbjct: 436 QLWMLVNLSLEPLVFNLPFSERFWFQVDNHTIELSVFLILFFGFVSRYFKRALSILIITV 495
Query: 212 LFTFPYSFSPD 222
+ P
Sbjct: 496 FVLWWEFGKPQ 506
>gi|163751458|ref|ZP_02158682.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella benthica KT99]
gi|161328672|gb|EDP99821.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella benthica KT99]
Length = 762
Score = 43.2 bits (100), Expect = 0.062, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 60/164 (36%), Gaps = 24/164 (14%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI------------LSLDNIPFGVMAW 151
F + YGL+ N++ +P S VVIP + L+ +L ++ M+
Sbjct: 381 FGGVSAYGLLFNLVLVPWFSLVVIPVSFLCFLIWAGGHVFFMELTQIFTLVDLSLMPMSL 440
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
G +I S+ + + ++ L+ + R + SI + + +++
Sbjct: 441 GFGLI------ESLPGAWISVSGQTIACLIFFMLGLLMFRVSQQRWRLV-SISLCMPLVL 493
Query: 212 LFTFPYSFSPD-----LLISEKGNLVALVDKNTLISNYSNPPSF 250
F P L+ L A+++K+ Y ++
Sbjct: 494 SVLFGLVTPPQDEWRLHLLDVGQGLSAVIEKSGKALIYDTGAAY 537
>gi|117617570|ref|YP_857284.1| DNA internalization-related competence protein ComEC/Rec2
[Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117558977|gb|ABK35925.1| DNA internalization-related competence protein ComEC/Rec2
[Aeromonas hydrophila subsp. hydrophila ATCC 7966]
Length = 761
Score = 43.2 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 44/120 (36%), Gaps = 7/120 (5%)
Query: 124 FVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIH-IAHRISVAHNEFCIGRIPETSF 180
+IP LI +LL LS L ++ F + GL ++ +A S + + P
Sbjct: 408 IGIIPLALIGVLLAPLSGELAHLLFWLADVGLQWVLWALARLASQWQLWWPV---PGWVL 464
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
+ LL + G+ ++ L +P L + + G +A++
Sbjct: 465 PFTALLTLLWCAWHVPGGRPLLLPGGVALL-LAAWPAPTHWQLRVLDVGQGLAVLITRGE 523
>gi|53728983|ref|ZP_00134353.2| COG0658: Predicted membrane metal-binding protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
Length = 719
Score = 43.2 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 65/166 (39%), Gaps = 8/166 (4%)
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++K I + L I ++ + F I + L AN++ +P+ SFV
Sbjct: 304 RKFAYRKWGKIVRFCLGLI--HLQCGILLIFTPVQFFFFEGISLTALPANLVIVPLYSFV 361
Query: 126 VIPAGLIAILLMI-LSLDNIPFGVMAWGLDIIIHIA-HRISVAHNEFCIGRIPETSFVTI 183
++P LI +L + + ++ + LD + I+ I ++H + I + + + I
Sbjct: 362 LVPLVLIGLLTDNGFNTWQLANRLIGYSLDYLETISQQWIWLSHRQQAQWLIIDLAILFI 421
Query: 184 VVEFLLMVFCKTNIRHI-GSIMIGITIIILFTFPYSFSPDLLISEK 228
+ L +T + ++ + + F P I+
Sbjct: 422 LYGILHA---RTALYWYKRYALLLCCQCVFYLFQLDKVPLQWITFD 464
>gi|189501873|ref|YP_001957590.1| hypothetical protein Aasi_0450 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497314|gb|ACE05861.1| hypothetical protein Aasi_0450 [Candidatus Amoebophilus asiaticus
5a2]
Length = 706
Score = 43.2 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 43/128 (33%), Gaps = 2/128 (1%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
++ + + + +FH P Y + +N + +P F+ I + + L
Sbjct: 398 TSVSLAAQLATTPISLYYFHQFPTYFIFSNWVVVPAAFFIFILGLCVLFTCWWVKLSVYI 457
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL--MVFCKTNIRHIGSI 203
++ + ++ IS T + + ++ +VF +
Sbjct: 458 AWILEYLAGLVNQFVAWISSLPYSVVFDIYIHTQDLLLWYGLIISVLVFLAKRKFWLLWP 517
Query: 204 MIGITIII 211
+ I +++
Sbjct: 518 ISSIAVLL 525
>gi|326316184|ref|YP_004233856.1| DNA internalization-like competence protein ComEC/Rec2 [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|323373020|gb|ADX45289.1| DNA internalization-related competence protein ComEC/Rec2
[Acidovorax avenae subsp. avenae ATCC 19860]
Length = 952
Score = 43.2 bits (100), Expect = 0.064, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 48/129 (37%), Gaps = 10/129 (7%)
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAW 151
+ + + + F I + G +AN+ AIP ++ VV P L+ +L L S A
Sbjct: 537 TLALTPLTVLLFGQISLVGFVANLAAIPWMTLVVTPLALLGVLWAPLWSAAAACLRPFAE 596
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
GL + + + P + V + +L+V + +M ++
Sbjct: 597 GLQWL------AAWPWATLSLPAAPLWAGVAGMAGGVLLVM---RLPWALRLMGLPLLLP 647
Query: 212 LFTFPYSFS 220
+ + +
Sbjct: 648 VLWWHPARP 656
>gi|229586246|ref|YP_002844747.1| ComEC/Rec2 family protein [Rickettsia africae ESF-5]
gi|228021296|gb|ACP53004.1| ComEC/Rec2 family protein [Rickettsia africae ESF-5]
Length = 82
Score = 43.2 bits (100), Expect = 0.064, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 20 IARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH-NTWTWKKISSIKQ 78
+A+L P P +DF F +Y I A Y S P++I +E++ +++ ++ S I
Sbjct: 2 LAKLYKPQNSILPEGYDFGFYAYLSDIGANDYAMSEPQIIERNETNFDSFIYRVCSYIYN 61
Query: 79 SFLNEIRANIGT 90
+ + +I+ +
Sbjct: 62 NLIEKIKGILQL 73
>gi|156934597|ref|YP_001438513.1| hypothetical protein ESA_02431 [Cronobacter sakazakii ATCC BAA-894]
gi|156532851|gb|ABU77677.1| hypothetical protein ESA_02431 [Cronobacter sakazakii ATCC BAA-894]
Length = 741
Score = 43.2 bits (100), Expect = 0.064, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 29/41 (70%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
FH + + L+AN++A+P ++FVV+P L++++L + L +
Sbjct: 367 FHGLSLTSLLANLIAVPGITFVVVPLVLLSMVLDLAHLAWL 407
>gi|149369998|ref|ZP_01889849.1| competence protein [unidentified eubacterium SCB49]
gi|149356489|gb|EDM45045.1| competence protein [unidentified eubacterium SCB49]
Length = 675
Score = 43.2 bits (100), Expect = 0.064, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 63/174 (36%), Gaps = 9/174 (5%)
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL----L 136
+ I T + + +FH P +I N++ +P L ++ +I L
Sbjct: 387 IWGIVTVTITAQLGLLPL-SLYYFHQFPGLFIITNVVILPFLGLLLGAGIIIIFLALINA 445
Query: 137 MILSLDNIPFGVMAWGLDIIIHIAHR--ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
+ L NI ++ D I +A + F I ++ T FV V L C
Sbjct: 446 LPEGLANIFGRIIKALNDFIAWVAGQEDFLFQDIPFSIFKVFGTYFVIFAVVLLWKQLCF 505
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGN--LVALVDKNTLISNYSN 246
I S +I + F S +L+I +K L+ + L+ S+
Sbjct: 506 KRIVLALSSIIVFISVFSFDKWKSTDSELVIFQKSRTTLIGVKQSQELVVFSSD 559
>gi|269469109|gb|EEZ80657.1| hydrolase,metallo-beta-lactamase superfamily [uncultured SUP05
cluster bacterium]
Length = 701
Score = 43.2 bits (100), Expect = 0.066, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 18/105 (17%)
Query: 46 ISAIGY---FYSIPKMIYSSESHN--TWTWKKISSIKQSFLNEIRANIGTYGSASASIFL 100
I ++G+ FY + +IY + H +W ++ I I + S +
Sbjct: 275 IFSVGFWLSFYVVAVIIYGAGQHRDKSWIYRLIY-------------IQLLITLSTIPLI 321
Query: 101 IKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
F+ + IAN++AIP+ SF+ P LI L + +L +
Sbjct: 322 AWFFNTGSILSPIANLVAIPVFSFITTPLSLIGALFALSNLTYLA 366
>gi|189461478|ref|ZP_03010263.1| hypothetical protein BACCOP_02137 [Bacteroides coprocola DSM 17136]
gi|189431812|gb|EDV00797.1| hypothetical protein BACCOP_02137 [Bacteroides coprocola DSM 17136]
Length = 654
Score = 43.2 bits (100), Expect = 0.066, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 49/139 (35%), Gaps = 4/139 (2%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
++ + ++ +F PVY L++N++ PI F++ L L + N
Sbjct: 396 IISLSLSAQLATLPLILYYFGTFPVYFLLSNLVVAPIAVFILSATLLALALGVFPVAANF 455
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLM---VFCKTNIRHI 200
+ + + + + +I + + V + + V C+ R I
Sbjct: 456 VVQGLDFAVRTLNEVMEQIQHWSGAQITSAYLSVWQAWLLAVAIVTLWRYVVCRNARRLI 515
Query: 201 GSIMIGITIIILFTFPYSF 219
++ +I+ F +
Sbjct: 516 VFLLTVNVLIVSFLWKQRE 534
>gi|257092671|ref|YP_003166312.1| DNA internalization-like competence protein ComEC/Rec2 [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257045195|gb|ACV34383.1| DNA internalization-related competence protein ComEC/Rec2
[Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
Length = 772
Score = 43.2 bits (100), Expect = 0.067, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 49/130 (37%), Gaps = 10/130 (7%)
Query: 113 IANILAIPILSFVVIPAGL-IAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
AN +AIP++SFV+ P L A++ L L + + + + +A +
Sbjct: 419 PANAVAIPLVSFVITPLALVFAVIPWPLLLHFDHWLLAGL-MRFLEWLAVW-----PVWE 472
Query: 172 IGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFP--YSFSPDLLISEK 228
P + + V + ++ + R +G ++ ++ P D+L +
Sbjct: 473 QAAPPLAATLLAVPGAIWLLLPRGFPARWLGVCLLLPALLWPAPRPALGDAWVDVLDVGQ 532
Query: 229 GNLVALVDKN 238
G V +
Sbjct: 533 GLAVVVRTAE 542
>gi|313675469|ref|YP_004053465.1| comec/rec2-related protein [Marivirga tractuosa DSM 4126]
gi|312942167|gb|ADR21357.1| ComEC/Rec2-related protein [Marivirga tractuosa DSM 4126]
Length = 705
Score = 43.2 bits (100), Expect = 0.068, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
+ + + + +FH P Y ++N++ IP +FV++ + ++ LMI+S+ +
Sbjct: 401 VSIAAQLATAPLGLLYFHQFPTYFFLSNLVVIP-AAFVILNS---SLFLMIISIWDWAAE 456
Query: 148 VMAWGLDIIIHIAHR--ISVAHNE-----FCIGRIPETSFVTIVVEFLLMVFCKTNIRHI 200
+ + +D I + + S+ + PE+ + I + F+ + + + ++
Sbjct: 457 RIGYVIDHFIQVINYLVFSLDYLPNSTIDGIFINTPESWLIYIAIFFIALFISEKKLNYL 516
Query: 201 GSIMIGI----TIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
++ + I L + L++ + G AL KN
Sbjct: 517 KLAVLSLFFMSASICLRQYENFHEKKLIVYDTGKHHALAIKNGF 560
>gi|292490662|ref|YP_003526101.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosococcus halophilus Nc4]
gi|291579257|gb|ADE13714.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosococcus halophilus Nc4]
Length = 790
Score = 43.2 bits (100), Expect = 0.070, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 50/128 (39%), Gaps = 8/128 (6%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVI-PAGLIAILLMILSLDNIPF--GVMAWGL 153
+ L+ F + + + N++A+P + +++ P L +LL+ L
Sbjct: 410 APLLLYQFQRLSLVAPLTNLVAVPWMGLLIVPPLLLGTLLLIPFPLVGTALINFADTLLA 469
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIIL 212
+ ++ ++ ++ R P ++ LL++ + R +G + +++L
Sbjct: 470 LLWGLLSGCATLPMAQWEQYRPPLWVLPPAILGSLLLLAPRGLPGRWLGLV----ALLVL 525
Query: 213 FTFPYSFS 220
F P
Sbjct: 526 FLTPPPRP 533
>gi|254931417|ref|ZP_05264776.1| comEC/Rec2 family protein [Listeria monocytogenes HPB2262]
gi|293582967|gb|EFF94999.1| comEC/Rec2 family protein [Listeria monocytogenes HPB2262]
gi|332311924|gb|EGJ25019.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
monocytogenes str. Scott A]
Length = 719
Score = 43.2 bits (100), Expect = 0.073, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NI 144
I + +S ++ HF+ G+ N++ +PI + +++P L +L S + +
Sbjct: 324 AISFISTIMSSAVMMYHFYSFSWVGIFFNLIYVPIFTMIILPGCLTVFVLSFFSTEIFHF 383
Query: 145 PFGVMAWGLDIIIHIAHRISVAH 167
P ++ + + ++ + + +
Sbjct: 384 PEAMLTFFIQLVEKLTYIFAKIP 406
>gi|254852106|ref|ZP_05241454.1| comEC/Rec2 family protein [Listeria monocytogenes FSL R2-503]
gi|300764853|ref|ZP_07074843.1| comE operon protein 3 [Listeria monocytogenes FSL N1-017]
gi|258605408|gb|EEW18016.1| comEC/Rec2 family protein [Listeria monocytogenes FSL R2-503]
gi|300514529|gb|EFK41586.1| comE operon protein 3 [Listeria monocytogenes FSL N1-017]
Length = 719
Score = 43.2 bits (100), Expect = 0.073, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NI 144
I + +S ++ HF+ G+ N++ +PI + +++P L +L S + +
Sbjct: 324 AISFISTIMSSAVMMYHFYSFSWVGIFFNLIYVPIFTMIILPGCLTVFVLSFFSTEIFHF 383
Query: 145 PFGVMAWGLDIIIHIAHRISVAH 167
P ++ + + ++ + + +
Sbjct: 384 PEAMLTFFIQLVEKLTYIFAKIP 406
>gi|254824459|ref|ZP_05229460.1| comEC/Rec2 family protein [Listeria monocytogenes FSL J1-194]
gi|255520860|ref|ZP_05388097.1| integral membrane protein ComEC [Listeria monocytogenes FSL J1-175]
gi|293593696|gb|EFG01457.1| comEC/Rec2 family protein [Listeria monocytogenes FSL J1-194]
Length = 719
Score = 43.2 bits (100), Expect = 0.073, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NI 144
I + +S ++ HF+ G+ N++ +PI + +++P L +L S + +
Sbjct: 324 AISFISTIMSSAVMMYHFYSFSWVGIFFNLIYVPIFTMIILPGCLTVFVLSFFSTEIFHF 383
Query: 145 PFGVMAWGLDIIIHIAHRISVAH 167
P ++ + + ++ + + +
Sbjct: 384 PEAMLTFFIQLVEKLTYIFAKIP 406
>gi|256829585|ref|YP_003158313.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfomicrobium baculatum DSM 4028]
gi|256578761|gb|ACU89897.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfomicrobium baculatum DSM 4028]
Length = 804
Score = 43.2 bits (100), Expect = 0.073, Method: Composition-based stats.
Identities = 35/240 (14%), Positives = 75/240 (31%), Gaps = 25/240 (10%)
Query: 32 PGL-FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGT 90
PG D + + + F + + W+ + + AN+
Sbjct: 342 PGSVHDLSLQLSVLAVGGLVLFMPAVAALLAPLRERGALWRPVHGLLTLLAVTCCANLFI 401
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA---GLIAILLMILSLDNIPFG 147
I +F + + L N+L +P+LS V+P GL A L +
Sbjct: 402 L------PIQILYFSEVTAH-LWLNLLWLPVLSLAVLPLSFLGLAASLCCPFLAEGCFIA 454
Query: 148 VMAWGLDII------IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIG 201
AW +D + + A R++ G V +V +L+ + R +
Sbjct: 455 A-AWCVDALDRFLVLLDGAGRLAATPVLRPAGVQVAGYAVVLVAGSVLLTAKRPRTRELF 513
Query: 202 SIMIGITIIILFTFPYSFSP-----DLLISEKG--NLVALVDKNTLISNYSNPPSFIFSQ 254
+ +G+ ++ + P ++ + + G V + + +
Sbjct: 514 CLGVGLVLLAAPSMWQEVRPWRDEVEMTVLDTGMSQAVYVRGRTGRTVLVDGGGGWSVDY 573
>gi|226224083|ref|YP_002758190.1| integral membrane protein ComEC [Listeria monocytogenes Clip81459]
gi|225876545|emb|CAS05254.1| Putative integral membrane protein ComEC [Listeria monocytogenes
serotype 4b str. CLIP 80459]
Length = 740
Score = 43.2 bits (100), Expect = 0.073, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NI 144
I + +S ++ HF+ G+ N++ +PI + +++P L +L S + +
Sbjct: 345 AISFISTIMSSAVMMYHFYSFSWVGIFFNLIYVPIFTMIILPGCLTVFVLSFFSTEIFHF 404
Query: 145 PFGVMAWGLDIIIHIAHRISVAH 167
P ++ + + ++ + + +
Sbjct: 405 PEAMLTFFIQLVEKLTYIFAKIP 427
>gi|46907710|ref|YP_014099.1| comEC/Rec2 family protein [Listeria monocytogenes serotype 4b str.
F2365]
gi|46880979|gb|AAT04276.1| comEC/Rec2 family protein [Listeria monocytogenes serotype 4b str.
F2365]
Length = 719
Score = 43.2 bits (100), Expect = 0.073, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NI 144
I + +S ++ HF+ G+ N++ +PI + +++P L +L S + +
Sbjct: 324 AISFISTIMSSAVMMYHFYSFSWVGIFFNLIYVPIFTMIILPGCLTVFVLSFFSTEIFHF 383
Query: 145 PFGVMAWGLDIIIHIAHRISVAH 167
P ++ + + ++ + + +
Sbjct: 384 PEAMLTFFIQLVEKLTYIFAKIP 406
>gi|5531412|emb|CAB50917.1| competence protein [Pseudomonas stutzeri]
Length = 741
Score = 43.2 bits (100), Expect = 0.073, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 62/150 (41%), Gaps = 6/150 (4%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISV 165
+ + G +AN+LA+P +S +V+P L+ L+ + L + L ++ + I+
Sbjct: 378 VSLSGPLANLLAVPWISVLVVPLALLGSFLLWVPWLGEALLWLAGGLLAVLFELLALIAG 437
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
+ +P ++ + + L+++ +R +G++++ + + P ++
Sbjct: 438 WQPAWLASALPLWAWSLVALGTLVLLLPAGVPLRVLGTLLLAPLLFAPDSRPEQGRAEVW 497
Query: 225 ISEKGN----LVALVDKNTLISNYSNPPSF 250
+ + G LV D L F
Sbjct: 498 VFDVGQGLSVLVRTRDHALLYDAGPRYGDF 527
>gi|47094096|ref|ZP_00231821.1| comE operon protein 3, putative [Listeria monocytogenes str. 4b
H7858]
gi|47017526|gb|EAL08334.1| comE operon protein 3, putative [Listeria monocytogenes str. 4b
H7858]
Length = 719
Score = 43.2 bits (100), Expect = 0.073, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NI 144
I + +S ++ HF+ G+ N++ +PI + +++P L +L S + +
Sbjct: 324 AISFISTIMSSAVMMYHFYSFSWVGIFFNLIYVPIFTMIILPGCLTVFVLSFFSTEIFHF 383
Query: 145 PFGVMAWGLDIIIHIAHRISVAH 167
P ++ + + ++ + + +
Sbjct: 384 PEAMLTFFIQLVEKLTYIFAKIP 406
>gi|262368624|ref|ZP_06061953.1| LOW QUALITY PROTEIN: competence factor involved in DNA uptake
[Acinetobacter johnsonii SH046]
gi|262316302|gb|EEY97340.1| LOW QUALITY PROTEIN: competence factor involved in DNA uptake
[Acinetobacter johnsonii SH046]
Length = 787
Score = 43.2 bits (100), Expect = 0.073, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 67/149 (44%), Gaps = 5/149 (3%)
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAW 151
+ +I F + I+N++AIP++S +V+P ++A L L L ++ F + W
Sbjct: 417 VALMPLVIIFFKQVSWVSPISNLVAIPLISLLVVPLEVLAALTFYLFEPLSSLLFQLADW 476
Query: 152 GLDIIIHIAHRI-SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITII 210
L ++ I + + ++ + + + +++ +++ K ++ ++ I ++
Sbjct: 477 VLVFLLGILNVLDALLPIKLYPIALNTWQVILLILLLIIVFMPKPSLPKSWLVLGLIPLL 536
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNT 239
+ +L++ + G A+ ++
Sbjct: 537 GF--SSQNRPFELIVLDVGQGQAVYMQHG 563
>gi|290473872|ref|YP_003466746.1| putative recombination protein with metallo-hydrolase domain
[Xenorhabdus bovienii SS-2004]
gi|289173179|emb|CBJ79952.1| putative recombination protein with metallo-hydrolase domain
[Xenorhabdus bovienii SS-2004]
Length = 781
Score = 43.2 bits (100), Expect = 0.074, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 54/110 (49%), Gaps = 12/110 (10%)
Query: 109 VYGLIANILAIPILSFVVIPAGLIAI--LLMILSLDNIPFGVMAWGLDIIIHIAHRISVA 166
+ L+AN+ A+PI+SF+ +P ++A+ + + + I + ++ + + + +A +
Sbjct: 415 IASLVANLWAVPIVSFLSVPLVMLALSCFFLPV-IQPILWQLVDYSI--VFALAPLQVLT 471
Query: 167 HNEFCIGRIPETSFVTIVVEFLLMVFCK-TNI---RHIGSIMIGITIIIL 212
H+ F G P +V + +VF + + + ++IGI + L
Sbjct: 472 HSWFETGHFP---IFITLVGWFSVVFWRLGWWKSYKWLLGVLIGIIVCYL 518
>gi|225010075|ref|ZP_03700547.1| ComEC/Rec2-related protein [Flavobacteria bacterium MS024-3C]
gi|225005554|gb|EEG43504.1| ComEC/Rec2-related protein [Flavobacteria bacterium MS024-3C]
Length = 695
Score = 43.2 bits (100), Expect = 0.075, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 55/163 (33%), Gaps = 22/163 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LF F Y +++I +P + N + + I Q + A +G G
Sbjct: 381 LFSLGFVMSYAAVASI--LLGMPLVESLGVPKNKY----VKKIWQLLGISLLAQLGVLGP 434
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP---FGVMA 150
+ FH P+ L+ N+L IP + ++ GL + + P ++
Sbjct: 435 ------SLFSFHQFPLLFLVTNLLIIPWIGILL---GLGIFTGIWWAFAKPPDLLVWLLN 485
Query: 151 WGLDIIIHIAHRISVAHN----EFCIGRIPETSFVTIVVEFLL 189
G I+ + I + + ++ FL+
Sbjct: 486 KGFSILNNTVEWIGAQEQWILKSIYFPSSYLWAMLLLMAGFLI 528
Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 32/203 (15%), Positives = 73/203 (35%), Gaps = 38/203 (18%)
Query: 44 KGISAIGYFYSIPKMIYSSESHNT--------WTWKKISSIKQSFLNEIR--ANIGTYGS 93
I+A+ F P + W + S S + + +
Sbjct: 296 GMIAAMLLFILAPLQRLPRGKVLSSVLLIFCLWIYAVFSGSSPSVVRAVAMFGFLSVGWI 355
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL-MILSLDNIP------- 145
+ +F + + + ++ N L + L FV+ A + +ILL M L ++++
Sbjct: 356 FNRPMFSLHYLAISFFFMVLWNPLVLFSLGFVMSYAAVASILLGMPL-VESLGVPKNKYV 414
Query: 146 ---FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
+ ++ L + + + + F + P + +V LL++
Sbjct: 415 KKIWQLLGISLLAQLGV-----LGPSLFSFHQFP----LLFLVTNLLIIPWIG------- 458
Query: 203 IMIGITIIILFTFPYSFSPDLLI 225
I++G+ I + ++ PDLL+
Sbjct: 459 ILLGLGIFTGIWWAFAKPPDLLV 481
>gi|212635084|ref|YP_002311609.1| DNA internalization-like competence protein ComEC/Rec2 [Shewanella
piezotolerans WP3]
gi|212556568|gb|ACJ29022.1| ComEC/Rec2-like protein:DNA internalization-like competence protein
ComEC/Rec2 [Shewanella piezotolerans WP3]
Length = 781
Score = 43.2 bits (100), Expect = 0.075, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 62/175 (35%), Gaps = 15/175 (8%)
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP------- 145
+ + F + + N+L +P SFVVIP L++++L I+ L +
Sbjct: 387 ALILGLLQASFFAGTSIISVAVNLLLVPWFSFVVIPLALLSLMLFIIGLGSGVEIDFTNI 446
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRH---IGS 202
F + L+ I + S + + + + L NI G
Sbjct: 447 FWLANQTLEPAIFLLDNASKVSFAWLNLSNQWIAVLLSAMAGLWFFRQFRNIYWRITFGV 506
Query: 203 IMIGITIIILFTFPYSFSPDLLIS----EKGNLVALVDKNTLISNYSNPPSFIFS 253
+++ + I+I + + + +G V +++ N Y SF S
Sbjct: 507 MLLPMIILIFQKYVNEQNQQWKVHMLDVGQGMSV-VIESNGRAIVYDTGASFGAS 560
>gi|99034793|ref|ZP_01314713.1| hypothetical protein Wendoof_01000459 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 93
Score = 43.2 bits (100), Expect = 0.075, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 34/95 (35%), Gaps = 11/95 (11%)
Query: 297 IKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQK 356
C+ ++ +V + +K+ I +C D+ I + + + CN +I L+
Sbjct: 7 CNDYGCIYNKGNNKLVLLAYKKEDISENCDKVDLTI-QLSEFDYSACNAK-IIKHADLET 64
Query: 357 QGSLEITIIPPSNDNDKVKFIIKSAIENLHFPWTK 391
G+ + + +K + PW
Sbjct: 65 YGTHSVWLTNR---------YVKINTVRSNGPWHM 90
>gi|262040988|ref|ZP_06014210.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041682|gb|EEW42731.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 741
Score = 43.2 bits (100), Expect = 0.077, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 56/126 (44%), Gaps = 19/126 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
FH + + + AN+LA+P+++ + +P L A+L+ + + ++ ++ +A
Sbjct: 367 FHGVSLTSMAANLLAVPLVTLLAVPLILTAMLVHLSGPEI---------VESLLWLAADR 417
Query: 164 SVAHNEFCIGRIPETSF-----VTIVVEFLLMVFCKTN---IRHIGSIMIGITIIILFTF 215
+A + + R+P+ + ++ RH S + ++++ L T
Sbjct: 418 VLAVLFWGLRRLPDGWLTLDTRWLWISSLPWLLVMGWRFQSWRH--SPALCLSVLFLLTR 475
Query: 216 PYSFSP 221
P+S P
Sbjct: 476 PFSRQP 481
>gi|116625478|ref|YP_827634.1| DNA internalization-related competence protein ComEC/Rec2
[Candidatus Solibacter usitatus Ellin6076]
gi|116228640|gb|ABJ87349.1| DNA internalization-related competence protein ComEC/Rec2
[Candidatus Solibacter usitatus Ellin6076]
Length = 844
Score = 42.9 bits (99), Expect = 0.081, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 49/153 (32%), Gaps = 9/153 (5%)
Query: 26 PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR 85
P G L D + + SA F +++ + +W + +
Sbjct: 388 PLGAGLRELSDVGRDPHLEPRSA--QFRIELRLLAETLRAPSWVVTAPARAVLFVYEIVL 445
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
+ + + + +FH + GL AN +P++ FVV P G +AI +
Sbjct: 446 TSAVVQLGLALPMVV--YFHRLGFSGLSANAFVVPLMGFVV-PVGFVAI----FTGWAWV 498
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
+ L + + + I P
Sbjct: 499 ARIAGMLLWASQKVVWYHAGLEPSWRIPTPPVW 531
>gi|269102440|ref|ZP_06155137.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268162338|gb|EEZ40834.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 787
Score = 42.9 bits (99), Expect = 0.082, Method: Composition-based stats.
Identities = 39/220 (17%), Positives = 77/220 (35%), Gaps = 24/220 (10%)
Query: 102 KH-FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIII 157
H F + ++ I N +A+P +S V +P +AIL + SL + + + W L ++
Sbjct: 409 WHWFGGMSIWAPIINFIAVPWVSMVTVPLLFLAILTSWWLPASL--LIWQLADWSLLPVL 466
Query: 158 HIAHRISVAHNEFCIGRIPETSFVTIVVEFLL---MVFCKTNIRHIGSIMIGITIIILFT 214
+IA E ++ + + + G I I + + + +
Sbjct: 467 YIASWAKGGWW-----LFSENTYWILCGAIVWGISLYLLPLRQFIGGHISIFVLLCLFYW 521
Query: 215 FPYSFSPDL-----LISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHV 269
+ SP + ++ L L++KN Y QWK + I AP +
Sbjct: 522 NLNNRSPAMGWKVHMLDVGHGLAILIEKNQQAWLYDTGS-----QWKDSSIARRVIAPVL 576
Query: 270 QKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSD 309
K+ + + + + + V SD
Sbjct: 577 AKKGIGQLDGFIISHSDNDHAGGTDHIVADFNPVKRRSSD 616
>gi|165976182|ref|YP_001651775.1| recombination protein 2 [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|165876283|gb|ABY69331.1| recombination protein 2 [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
Length = 764
Score = 42.9 bits (99), Expect = 0.082, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 65/166 (39%), Gaps = 8/166 (4%)
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++K I + L I ++ + F I + L AN++ +P+ SFV
Sbjct: 349 RKFAYRKWGKIVRFCLGLI--HLQCGILLIFTPVQFFFFEGISLTALPANLVIVPLYSFV 406
Query: 126 VIPAGLIAILLM-ILSLDNIPFGVMAWGLDIIIHIA-HRISVAHNEFCIGRIPETSFVTI 183
++P LI +L + + ++ + LD + I+ I ++H + I + + + I
Sbjct: 407 LVPLVLIGLLTDNGFNTWQLANRLIGYSLDYLETISQQWIWLSHRQQAQWLIIDLAILFI 466
Query: 184 VVEFLLMVFCKTNIRHI-GSIMIGITIIILFTFPYSFSPDLLISEK 228
+ L +T + ++ + + F P I+
Sbjct: 467 LYGILHA---RTALYWYKRYALLLCCQCVFYLFQLDKVPLQWITFD 509
>gi|121607402|ref|YP_995209.1| DNA internalization-like competence protein ComEC/Rec2
[Verminephrobacter eiseniae EF01-2]
gi|121552042|gb|ABM56191.1| DNA internalization-related competence protein ComEC/Rec2
[Verminephrobacter eiseniae EF01-2]
Length = 878
Score = 42.9 bits (99), Expect = 0.082, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 52/149 (34%), Gaps = 10/149 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F + + G AN++AIP ++ VV P L +L L + + A L +I + +
Sbjct: 463 FAQLTLVGFAANLVAIPWVTLVVTPLALAGLLWAPL------WSLAALALQPLIALLQWL 516
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI--RHIGSIMIGITIIILFTFPYSFSP 221
+ V ++ + R ++ + P
Sbjct: 517 AQWPWAQLFLPAAPLWAGGAAVAGGALLALRMPWQLRLPALALLVPVLWWQPQRPAPGQF 576
Query: 222 DLLISE--KGNLVALVDKNTLISNYSNPP 248
+LL ++ +GN V + N + + P
Sbjct: 577 ELLAADIGQGNAVLVRTANHTLLYDAGPR 605
>gi|323496029|ref|ZP_08101092.1| ComEC/rec2 family protein [Vibrio sinaloensis DSM 21326]
gi|323318920|gb|EGA71868.1| ComEC/rec2 family protein [Vibrio sinaloensis DSM 21326]
Length = 746
Score = 42.9 bits (99), Expect = 0.082, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 37/114 (32%), Gaps = 18/114 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHIAHR 162
F I GL+ N++ +P S +V+P +A+ S + W L++++
Sbjct: 378 FGGISATGLLYNLVFVPWFSLIVVPITFLALASAPWSFVAERLWWCSDWSLNVVVKAVDF 437
Query: 163 ISVAHNEFCIGRIPETS-----------------FVTIVVEFLLMVFCKTNIRH 199
++ + +++ FL + + R
Sbjct: 438 SLYGWLPISQAQLSILVVMLVLLVISVWLDRKAILLAMIIAFLGLTDWQPRWRW 491
>gi|303251427|ref|ZP_07337603.1| recombination protein 2 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|307252338|ref|ZP_07534235.1| hypothetical protein appser6_8560 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302649659|gb|EFL79839.1| recombination protein 2 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306860260|gb|EFM92276.1| hypothetical protein appser6_8560 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 764
Score = 42.9 bits (99), Expect = 0.082, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 65/166 (39%), Gaps = 8/166 (4%)
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++K I + L I ++ + F I + L AN++ +P+ SFV
Sbjct: 349 RKFAYRKWGKIVRFCLGLI--HLQCGILLIFTPVQFFFFEGISLTALPANLVIVPLYSFV 406
Query: 126 VIPAGLIAILLM-ILSLDNIPFGVMAWGLDIIIHIA-HRISVAHNEFCIGRIPETSFVTI 183
++P LI +L + + ++ + LD + I+ I ++H + I + + + I
Sbjct: 407 LVPLVLIGLLTDNGFNTWQLANRLIGYSLDYLETISQQWIWLSHRQQAQWLIIDLAILFI 466
Query: 184 VVEFLLMVFCKTNIRHI-GSIMIGITIIILFTFPYSFSPDLLISEK 228
+ L +T + ++ + + F P I+
Sbjct: 467 LYGILHA---RTALYWYKRYALLLCCQCVFYLFQLDKVPLQWITFD 509
>gi|307571063|emb|CAR84242.1| DNA internalization-related competence protein, putative [Listeria
monocytogenes L99]
Length = 732
Score = 42.9 bits (99), Expect = 0.083, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NI 144
I + +S+ ++ HF+ G+ N++ +PI + +++P L +L + +
Sbjct: 337 AISFISTIMSSVVMMYHFYSFSWVGIFFNLIYVPIFTMIILPGCLTVFVLSFFPTEIFHF 396
Query: 145 PFGVMAWGLDIIIHIAHRISVAH 167
P V+ + + ++ + + +
Sbjct: 397 PEVVLTFFIQLVEKLTYIFAKIP 419
>gi|217964372|ref|YP_002350050.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
monocytogenes HCC23]
gi|217333642|gb|ACK39436.1| DNA internalization-related competence protein ComEC/Rec2 [Listeria
monocytogenes HCC23]
Length = 719
Score = 42.9 bits (99), Expect = 0.083, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NI 144
I + +S+ ++ HF+ G+ N++ +PI + +++P L +L + +
Sbjct: 324 AISFISTIMSSVVMMYHFYSFSWVGIFFNLIYVPIFTMIILPGCLTVFVLSFFPTEIFHF 383
Query: 145 PFGVMAWGLDIIIHIAHRISVAH 167
P V+ + + ++ + + +
Sbjct: 384 PEVVLTFFIQLVEKLTYIFAKIP 406
>gi|126208244|ref|YP_001053469.1| recombination protein 2 [Actinobacillus pleuropneumoniae L20]
gi|126097036|gb|ABN73864.1| recombination protein 2 [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
Length = 764
Score = 42.9 bits (99), Expect = 0.083, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 65/166 (39%), Gaps = 8/166 (4%)
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++K I + L I ++ + F I + L AN++ +P+ SFV
Sbjct: 349 RKFAYRKWGKIVRFCLGLI--HLQCGILLIFTPVQFFFFEGISLTALPANLVIVPLYSFV 406
Query: 126 VIPAGLIAILLM-ILSLDNIPFGVMAWGLDIIIHIA-HRISVAHNEFCIGRIPETSFVTI 183
++P LI +L + + ++ + LD + I+ I ++H + I + + + I
Sbjct: 407 LVPLVLIGLLTDNGFNTWQLANRLIGYSLDYLETISQQWIWLSHRQQAQWLIIDLAILFI 466
Query: 184 VVEFLLMVFCKTNIRHI-GSIMIGITIIILFTFPYSFSPDLLISEK 228
+ L +T + ++ + + F P I+
Sbjct: 467 LYGILHA---RTALYWYKRYALLLCCQCVFYLFQLDKVPLQWITFD 509
>gi|126436101|ref|YP_001071792.1| ComEC/Rec2-related protein [Mycobacterium sp. JLS]
gi|126235901|gb|ABN99301.1| ComEC/Rec2-related protein [Mycobacterium sp. JLS]
Length = 514
Score = 42.9 bits (99), Expect = 0.084, Method: Composition-based stats.
Identities = 14/171 (8%), Positives = 45/171 (26%), Gaps = 3/171 (1%)
Query: 50 GYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV 109
G+ S+ W+ + + + + + + + +
Sbjct: 337 GFALSVAATAGLVVIAPVWSRRLTGRGWPKPVADAV-GVAMAAQLVTAPLVAGISGRVSL 395
Query: 110 YGLIANILAIPILS-FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
++ANI+ P++ VI A+ + + + L ++ +A +
Sbjct: 396 VSVLANIVVAPVIPPITVIGTAAAALCWLWPAGAGLLIRFTGPPLWWLLRVADWAAAVPG 455
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
+ + +V R + + ++
Sbjct: 456 ASVPVPSGWAGVGLVAAGGIALVVL-WRWRWVRLAAGAAVLGLVAWSASGH 505
>gi|330014028|ref|ZP_08307844.1| DNA internalization competence protein ComEC/Rec2-like protein
[Klebsiella sp. MS 92-3]
gi|328533285|gb|EGF60037.1| DNA internalization competence protein ComEC/Rec2-like protein
[Klebsiella sp. MS 92-3]
Length = 741
Score = 42.9 bits (99), Expect = 0.084, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 56/126 (44%), Gaps = 19/126 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
FH + + + AN+LA+P+++ + +P L A+L+ + + ++ ++ +A
Sbjct: 367 FHGVSLTSMAANLLAVPLVTLLAVPLILTAMLVHLSGPEI---------VESLLWLAADR 417
Query: 164 SVAHNEFCIGRIPETSF-----VTIVVEFLLMVFCKTN---IRHIGSIMIGITIIILFTF 215
+A + + R+P+ + ++ RH S + ++++ L T
Sbjct: 418 VLAVLFWGLRRLPDGWLTLDARWLWISSLPWLLVMGWRFQSWRH--SPALCLSVLFLLTR 475
Query: 216 PYSFSP 221
P+S P
Sbjct: 476 PFSRQP 481
>gi|120554664|ref|YP_959015.1| DNA internalization-related competence protein ComEC/Rec2
[Marinobacter aquaeolei VT8]
gi|120324513|gb|ABM18828.1| DNA internalization-related competence protein ComEC/Rec2
[Marinobacter aquaeolei VT8]
Length = 806
Score = 42.9 bits (99), Expect = 0.084, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 58/161 (36%), Gaps = 4/161 (2%)
Query: 58 MIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANIL 117
+ + + + + A + + + L+ P+ G AN+L
Sbjct: 369 LSFGAVGVLLAVFSGRLGSSGWLSALLIAQLAVFVGLWPMLMLVH--QGQPLAGFAANLL 426
Query: 118 AIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
A+P +SF V+P + ++ +LS + V + G D+++ F G++ +
Sbjct: 427 AVPWVSFAVMPVLFLGSIIALLSGGWLLPWV-SAGFDLVLGALWWWLELVARFPAGQM-Q 484
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+ + L+ R + +L + P+S
Sbjct: 485 PLPLPLAAGLALLALWGIRWRDWRWRALLGVTFLLLSVPWS 525
>gi|256850962|ref|ZP_05556351.1| competence protein ComEC [Lactobacillus jensenii 27-2-CHN]
gi|260661176|ref|ZP_05862090.1| competence protein ComEC [Lactobacillus jensenii 115-3-CHN]
gi|282934123|ref|ZP_06339401.1| ComEC/Rec2-like protein [Lactobacillus jensenii 208-1]
gi|256616024|gb|EEU21212.1| competence protein ComEC [Lactobacillus jensenii 27-2-CHN]
gi|260548113|gb|EEX24089.1| competence protein ComEC [Lactobacillus jensenii 115-3-CHN]
gi|281301737|gb|EFA94003.1| ComEC/Rec2-like protein [Lactobacillus jensenii 208-1]
Length = 750
Score = 42.9 bits (99), Expect = 0.085, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 52/134 (38%), Gaps = 8/134 (5%)
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM--ILSLDNIPFGVMAWGLDIIIHI 159
+F+ + V ++ NIL +P +FVV+P I I L L + + ++ G I I
Sbjct: 370 FNFYQVNVLTVVFNILIVPYFNFVVMPLTFINIFLFNNFLVVSKLFEKILEIGETI---I 426
Query: 160 AHRISVAHNEFCIGRIPETS---FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+ G+I + I + +L+ K ++ +I ++I +
Sbjct: 427 NNFAEANIGMVTFGKISWWQCLFLLIISLGYLIFRLEKFKLKLPAITLIIAYLLIFISIH 486
Query: 217 YSFSPDLLISEKGN 230
+ + + G
Sbjct: 487 FPLQGQVTFIDVGQ 500
>gi|261416666|ref|YP_003250349.1| DNA internalization-related competence protein ComEC/Rec2
[Fibrobacter succinogenes subsp. succinogenes S85]
gi|261373122|gb|ACX75867.1| DNA internalization-related competence protein ComEC/Rec2
[Fibrobacter succinogenes subsp. succinogenes S85]
gi|302326309|gb|ADL25510.1| DNA internalization competence protein ComEC/Rec2-like protein
[Fibrobacter succinogenes subsp. succinogenes S85]
Length = 807
Score = 42.9 bits (99), Expect = 0.085, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 9/102 (8%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ I + P + W+KI + + +
Sbjct: 367 GFQLSFAATAGIIIGTPH---NPTKLLPDSFKQNKLWQKIQAFAID-----PTYVTLCAT 418
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ + FLI HF + + NI+ +P +S + AGL A L
Sbjct: 419 LATAPFLIHHFKTLSPFAWFGNIIIVPAISLG-MQAGLFAQL 459
>gi|330952669|gb|EGH52929.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae Cit 7]
Length = 734
Score = 42.9 bits (99), Expect = 0.087, Method: Composition-based stats.
Identities = 30/256 (11%), Positives = 82/256 (32%), Gaps = 14/256 (5%)
Query: 7 KYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
P + +L P+G P FD+ + I A G + + +
Sbjct: 113 GGQPVSSGERWRMAVKLKRPAGLVNPDAFDYEAWLLAQRIGATGTVVDGQLLAPARAAWR 172
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
+++ ++ A + + + + G + ++L I +
Sbjct: 173 DAIRQRLLAVDAQGREGGLAALVLGDGSG---LSSTDWQVLQDTGTV-HLLVISGQHIGL 228
Query: 127 IPAGLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
+ + A++ L L +A ++ + +P +V
Sbjct: 229 LAGVIYALVA---GLARWGLWPRFLPWLPWACALAFSAALGYGLLAGFEVPVRRACVMVA 285
Query: 186 EFLLMVFCKTNIRHIGSI---MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+++ + RH+G + ++ +++F + P +S + ++ + +
Sbjct: 286 ---MVLLWRLRFRHLGVVWPLLLSFNTVLIFEPLVTLQPGFWLSFAAVGILILIFSGRLG 342
Query: 243 NYSNPPSFIFSQWKSA 258
+ S+ +QW A
Sbjct: 343 AWRWWQSWTRAQWLIA 358
Score = 40.9 bits (94), Expect = 0.34, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHIAHRISV 165
I + G AN+LA+P +S +V+P L+ LL+ + + + GL + ++
Sbjct: 372 ISLSGPFANLLAVPWVSVIVLPPALLGTLLLPVPVVGEGLLWLAGGGLQWLFVFLDAVAA 431
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
A + +P ++ ++ LL++ K +R +G ++ + + D+L
Sbjct: 432 ALPAWLPSAVPIWAWWLSLLGALLLLLPKGMPVRPLGWPLLLLCVFPPLESVPEGQVDVL 491
Query: 225 ISEKGNLVALV 235
+ G +A++
Sbjct: 492 QLDVGQGLAIL 502
>gi|190150096|ref|YP_001968621.1| recombination protein 2 [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|303252316|ref|ZP_07338482.1| recombination protein 2 [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|307247747|ref|ZP_07529785.1| hypothetical protein appser2_7380 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307261248|ref|ZP_07542923.1| hypothetical protein appser12_8120 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|189915227|gb|ACE61479.1| recombination protein 2 [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|302648775|gb|EFL78965.1| recombination protein 2 [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|306855777|gb|EFM87942.1| hypothetical protein appser2_7380 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306868979|gb|EFN00781.1| hypothetical protein appser12_8120 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 764
Score = 42.9 bits (99), Expect = 0.087, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 65/166 (39%), Gaps = 8/166 (4%)
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++K I + L I ++ + F I + L AN++ +P+ SFV
Sbjct: 349 RKFAYRKWGKIVRFCLGLI--HLQCGILLIFTPVQFFFFEGISLTALPANLVIVPLYSFV 406
Query: 126 VIPAGLIAILLM-ILSLDNIPFGVMAWGLDIIIHIA-HRISVAHNEFCIGRIPETSFVTI 183
++P LI +L + + ++ + LD + I+ I ++H + I + + + I
Sbjct: 407 LVPLVLIGLLTDNGFNTWQLANRLIGYSLDYLETISQQWIWLSHRQQAQWLIIDLAILFI 466
Query: 184 VVEFLLMVFCKTNIRHI-GSIMIGITIIILFTFPYSFSPDLLISEK 228
+ L +T + ++ + + F P I+
Sbjct: 467 LYGILHA---RTALYWYKRYALLLCCQCVFYLFQLDKVPLQWITFD 509
>gi|241667471|ref|ZP_04755049.1| ComEC/Rec2-related competence protein [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254876018|ref|ZP_05248728.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842039|gb|EET20453.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 671
Score = 42.9 bits (99), Expect = 0.088, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ +F V ++AN +AIP++SFV++P L+ +LL + L + + + + ++I
Sbjct: 329 PISVYYFGGFSVISILANTVAIPLVSFVIVPLLLVCLLLSYVGLS--FWIIPSLVIKLLI 386
Query: 158 H 158
Sbjct: 387 A 387
>gi|170720694|ref|YP_001748382.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas putida W619]
gi|169758697|gb|ACA72013.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas putida W619]
Length = 737
Score = 42.9 bits (99), Expect = 0.093, Method: Composition-based stats.
Identities = 26/212 (12%), Positives = 58/212 (27%), Gaps = 9/212 (4%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P A A L P+G P D K I A G + +
Sbjct: 120 PVRAGERWRLAATLQRPAGLLNPHGPDREAQLLAKRIGATGTVKAGHVLDTGQPGWRDAL 179
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+++ S+ + + + + + G + ++L I ++
Sbjct: 180 RQRLLSVAAHGREAALVALVLGDG---AGLAREDWQALQATGTV-HLLVISGQHIGLVAG 235
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL 189
L A++ L L + A + + +
Sbjct: 236 LLYALVA---GLARWGLWP--QALPWLPCACGLALGAALAYGWLAGAGVPVQRACLMLAV 290
Query: 190 MVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
++ + RH+G++ + +I +P
Sbjct: 291 VLLWRLRFRHLGALFPLLLALIGVLVAEPLAP 322
>gi|293372312|ref|ZP_06618697.1| ComEC/Rec2-like protein [Bacteroides ovatus SD CMC 3f]
gi|292632754|gb|EFF51347.1| ComEC/Rec2-like protein [Bacteroides ovatus SD CMC 3f]
Length = 647
Score = 42.9 bits (99), Expect = 0.094, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 41/109 (37%), Gaps = 10/109 (9%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
++ + ++ +F V+ L+ N++ IP ++ ++ A +I +LL L +
Sbjct: 346 SVSVAAQIGTAPLVMFYFSRFSVHFLLTNLVVIPFITIILY-AAVIMLLLTP--LSWLQI 402
Query: 147 GVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS------FVTIVVEFLL 189
V G+ ++ + + I +V FLL
Sbjct: 403 VVAE-GVKKLLEGLNFFVRWVEQLPYASIDGIWLYQSEILGIYIVGFLL 450
>gi|299148264|ref|ZP_07041326.1| competence protein [Bacteroides sp. 3_1_23]
gi|298513025|gb|EFI36912.1| competence protein [Bacteroides sp. 3_1_23]
Length = 638
Score = 42.9 bits (99), Expect = 0.095, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 41/109 (37%), Gaps = 10/109 (9%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
++ + ++ +F V+ L+ N++ IP ++ ++ A +I +LL L +
Sbjct: 337 SVSVAAQIGTAPLVMFYFSRFSVHFLLTNLVVIPFITIILY-AAVIMLLLTP--LSWLQI 393
Query: 147 GVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS------FVTIVVEFLL 189
V G+ ++ + + I +V FLL
Sbjct: 394 VVAE-GVKKLLEGLNFFVRWVEQLPYASIDGIWLYQSEILGIYIVGFLL 441
>gi|308069981|ref|YP_003871586.1| DNA internalization-related competence protein ComEC/Rec2
[Paenibacillus polymyxa E681]
gi|305859260|gb|ADM71048.1| DNA internalization-related competence protein ComEC/Rec2
[Paenibacillus polymyxa E681]
Length = 924
Score = 42.9 bits (99), Expect = 0.097, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 4/116 (3%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN-- 143
I + + +F+ + AN + +P+++++V+P G +A+ L L D
Sbjct: 421 VAITITAQLVSFPMTVFYFNQFSLLSFAANFVLVPLITYIVLPLGTVAMGLSFLWEDGAR 480
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF--CKTNI 197
I D+ + ++V I +V L V KT +
Sbjct: 481 IFAWPAEQLNDLTFLLVKWLNVDDAYVSIWPSSSILWVMAYYAALYSVLYCLKTWL 536
>gi|237719191|ref|ZP_04549672.1| competence protein [Bacteroides sp. 2_2_4]
gi|229451570|gb|EEO57361.1| competence protein [Bacteroides sp. 2_2_4]
Length = 638
Score = 42.9 bits (99), Expect = 0.097, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 41/111 (36%), Gaps = 10/111 (9%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
++ + ++ +F V+ L+ N++ IP ++ ++ A +I +LL L +
Sbjct: 335 LISVSVAAQIGTAPLVMFYFSRFSVHFLLTNLVVIPFITIILY-AAVIMLLLTP--LSWL 391
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS------FVTIVVEFLL 189
V G+ ++ + + I +V FLL
Sbjct: 392 QIVVAE-GVKKLLEGLNFFVRWVEQLPYASIDGIWLYQSEILGIYIVGFLL 441
>gi|114330743|ref|YP_746965.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosomonas eutropha C91]
gi|114307757|gb|ABI59000.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosomonas eutropha C91]
Length = 799
Score = 42.9 bits (99), Expect = 0.098, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 45/125 (36%), Gaps = 14/125 (11%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F I + +AN +AIP+++ V++P L+A + L+ + + L I + + +
Sbjct: 409 FQQISLISPVANAVAIPVITLVIVPLALLATIP---GLEFLLLVAYPF-LQITMAVLQWL 464
Query: 164 SVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKT---------NIRHIGSIMIGITIIILF 213
+ P + + + ++ R +G + ++
Sbjct: 465 GELPLATWQQHAPPLWAVIAATIGVKWLLLPGGPGLGVSAGFPARWLGILAGLPLFLVFP 524
Query: 214 TFPYS 218
P +
Sbjct: 525 EKPAA 529
>gi|261210523|ref|ZP_05924816.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio sp. RC341]
gi|260840308|gb|EEX66879.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio sp. RC341]
Length = 747
Score = 42.9 bits (99), Expect = 0.099, Method: Composition-based stats.
Identities = 30/243 (12%), Positives = 83/243 (34%), Gaps = 33/243 (13%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + ++ + Y + + + W + + +
Sbjct: 331 SFWMSFLAVAIVLYQLANQEKRQAWWKALLWAQLTLVCLM-------------------A 371
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN--IPFGVMAWGLDI 155
F + + ++ N+L IP S V++PA + + L + + + + W
Sbjct: 372 PVTAYFFGGLSMTSVVYNLLFIPWFSVVIVPALFVGLFLSVTMSYWATLYWPWVDWTFYP 431
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+ A + + + +V+ L + + + ++ + +L+ +
Sbjct: 432 LAW-ALQFADVGWVVIPKTVQGFVAALVVISLLY------RVMSLRACILAWCLAVLWWW 484
Query: 216 PYSFSP----DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
S +P D+L G L +++++ Y S+ + +LI P + +++
Sbjct: 485 FPSVTPRWRMDILDVGHG-LAIVIEQDKRAIIYDTGSSWSGGSYVESLIEPILQQRGIRR 543
Query: 272 EDL 274
D
Sbjct: 544 LDG 546
>gi|257055304|ref|YP_003133136.1| DNA internalization-related competence protein ComEC/Rec2
[Saccharomonospora viridis DSM 43017]
gi|256585176|gb|ACU96309.1| DNA internalization-related competence protein ComEC/Rec2
[Saccharomonospora viridis DSM 43017]
Length = 837
Score = 42.9 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 23/164 (14%), Positives = 55/164 (33%), Gaps = 7/164 (4%)
Query: 50 GYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV 109
G+ S+ W+ + + A + T + + + + V
Sbjct: 362 GFTLSVVATAGLVLLAPLWSRALERRGVPGGIADALA-VPTVAFFATAPVIAGMVGEVSV 420
Query: 110 YGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAH 167
++AN+ A P+++ + + G A L L I V+ + +I +A +
Sbjct: 421 VSIVANLAAAPVVAPITV-LGTAAAALAPLWPGAAEIVVQVVGPAVSWLILVARHAASVP 479
Query: 168 NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
P + + F++++ +R G + +I
Sbjct: 480 GAVIP--WPSGWWGGVSAVFVIVLLWCG-LRFRGVRLAVTLAVI 520
>gi|160883235|ref|ZP_02064238.1| hypothetical protein BACOVA_01204 [Bacteroides ovatus ATCC 8483]
gi|156111460|gb|EDO13205.1| hypothetical protein BACOVA_01204 [Bacteroides ovatus ATCC 8483]
Length = 638
Score = 42.9 bits (99), Expect = 0.10, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 41/109 (37%), Gaps = 10/109 (9%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
++ + ++ +F V+ L+ N++ IP ++ ++ A +I +LL L +
Sbjct: 337 SVSVAAQIGTAPLVMFYFSRFSVHFLLTNLVVIPFITIILY-AAVIMLLLTP--LSWLQI 393
Query: 147 GVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS------FVTIVVEFLL 189
V G+ ++ + + I +V FLL
Sbjct: 394 VVAE-GVKKLLEGLNFFVRWVEQLPYASIDGIWLYQSEILGIYIVGFLL 441
>gi|307254585|ref|ZP_07536418.1| hypothetical protein appser9_8300 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306862473|gb|EFM94434.1| hypothetical protein appser9_8300 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
Length = 585
Score = 42.5 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 65/166 (39%), Gaps = 8/166 (4%)
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ ++K I + L I ++ + F I + L AN++ +P+ SFV
Sbjct: 314 RKFAYRKWGKIVRFCLGLI--HLQCGILLIFTPVQFFFFEGISLTALPANLVIVPLYSFV 371
Query: 126 VIPAGLIAILLMI-LSLDNIPFGVMAWGLDIIIHIA-HRISVAHNEFCIGRIPETSFVTI 183
++P LI +L + + ++ + LD + I+ I ++H + I + + + I
Sbjct: 372 LVPLVLIGLLTDNGFNTWQLANRLIGYSLDYLETISQQWIWLSHRQQAQWLIIDLAILFI 431
Query: 184 VVEFLLMVFCKTNIRHI-GSIMIGITIIILFTFPYSFSPDLLISEK 228
+ L +T + ++ + + F P I+
Sbjct: 432 LYGILHA---RTALYWYKRYALLLCCQCVFYLFQLDKVPLQWITFD 474
>gi|327484426|gb|AEA78833.1| Predicted hydrolase of the metallo-beta- lactamase superfamily
[Vibrio cholerae LMA3894-4]
Length = 674
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 73/187 (39%), Gaps = 20/187 (10%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-----SLDNIPFGVMAW 151
+ F + V ++ N++ IP S V++PA + +LLM++ +
Sbjct: 298 APVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVVWPSVAAAYWPWVDWTFL 357
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
LD + A G + + + ++ F+ + C + ++++
Sbjct: 358 PLDWALQFADVGWWVVPSKVQGVVAASVAIVLLYRFMSLKACS----------LLLSMMG 407
Query: 212 LFTFPYSFSP----DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
L+ + S +P D+L G L +++++ Y S+ + ++I P +
Sbjct: 408 LWWWFPSLTPLWRMDVLDVGHG-LAIVIEQDERAIVYDTGSSWPGGSYVQSVIEPILQQR 466
Query: 268 HVQKEDL 274
+++ D
Sbjct: 467 GLRQVDG 473
>gi|300691900|ref|YP_003752895.1| hypothetical protein RPSI07_2256 [Ralstonia solanacearum PSI07]
gi|299078960|emb|CBJ51620.1| conserved membrane protein of unknown function, ComEC/Rec2 domain
[Ralstonia solanacearum PSI07]
Length = 845
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 25/192 (13%), Positives = 52/192 (27%), Gaps = 10/192 (5%)
Query: 30 AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIG 89
F +F + A + + W+ + + I
Sbjct: 377 VMSAGFWLSFGAVAVIFLAARIVAADAWEDGRRPAWPIRAWRGLRGAAR---------IQ 427
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM 149
+ + F + V +AN LAIP++SFV P LI L
Sbjct: 428 LAVTFGLLPLTLLLFQQVSVVSAVANALAIPVVSFVTTPLALIGAAL-PEPWSPPVLAWA 486
Query: 150 AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITI 209
++ +++ + + V +L++ R G +
Sbjct: 487 EASFGWLVSWLDGLAMPGWSVWVAPVAPAWAWMPAVVGVLLLLVPGGCRAWAWRAQGAIL 546
Query: 210 IILFTFPYSFSP 221
++ + P
Sbjct: 547 LLPMLLARAPVP 558
>gi|256419973|ref|YP_003120626.1| ComEC/Rec2-related protein [Chitinophaga pinensis DSM 2588]
gi|256034881|gb|ACU58425.1| ComEC/Rec2-related protein [Chitinophaga pinensis DSM 2588]
Length = 694
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 48/131 (36%), Gaps = 11/131 (8%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
+ + +FH P+Y L AN++A+P+ + V L LL+++
Sbjct: 397 MTALTLAAQLFTLPVSLYYFHQFPLYFLPANMMAVPLSTVV-----LYGELLLLIVGRIP 451
Query: 145 PFGVMAWGL-----DIIIHIAHRISVAHNEF-CIGRIPETSFVTIVVEFLLMVFCKTNIR 198
VM L ++ + ++I ++P S + + ++ +
Sbjct: 452 AIAVMVGSLLKMIMQLMNTLVNQIGHLPGALMADTQLPLFSVLCLYACIGGLLLWMMHQW 511
Query: 199 HIGSIMIGITI 209
G ++ + +
Sbjct: 512 KPGLYVLLLAM 522
>gi|110833913|ref|YP_692772.1| DNA internalization-like protein [Alcanivorax borkumensis SK2]
gi|110647024|emb|CAL16500.1| DNA internalization-related protein [Alcanivorax borkumensis SK2]
Length = 742
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 57/166 (34%), Gaps = 15/166 (9%)
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
+ + + + +++ FH +AN++ +P+ + +VIPA L+ LL
Sbjct: 356 RSHGSWRLIILLPVVMTMASAGL----FHQWTPSAPLANLILVPLYTVLVIPAALLGALL 411
Query: 137 MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN 196
A G+++ + + ++ IP + V ++++F
Sbjct: 412 D----QTWLLQAAATGVELSVWVMTWLANQG-------IPSWLMLPSTVSGIVLMFGLML 460
Query: 197 IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
+ + + P+ L S + +L A L
Sbjct: 461 LLMPFVPFPRRLLPFCLLPWLTQQPEPLASGEWSLTAFDVGQGLAV 506
>gi|225849490|ref|YP_002729655.1| DNA internalization-related competence protein ComEC/Rec2
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225644109|gb|ACN99159.1| DNA internalization-related competence protein ComEC/Rec2
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 571
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 49/141 (34%), Gaps = 9/141 (6%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
+ + + + ++ +F+ G+IA PI S + P +++ + +
Sbjct: 334 GVSLFATLFTAPIVLYYFYNFSPTGIIA----TPIASLPLYPLLTLSVFNIFTGFNVDFL 389
Query: 147 -GVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
M + I I + S + G P V + +++ IR + +++
Sbjct: 390 VKFMDFFGMIFIEVVKFFSSL-GFYYTGFSPSLWVVGLYF-VVILTVFLLKIRPVEKVLV 447
Query: 206 --GITIIILFTFPYSFSPDLL 224
++ LF P +
Sbjct: 448 SCFAFVVFLFLSKSDLRPKIY 468
>gi|120610039|ref|YP_969717.1| DNA internalization-like competence protein ComEC/Rec2 [Acidovorax
citrulli AAC00-1]
gi|120588503|gb|ABM31943.1| DNA internalization-related competence protein ComEC/Rec2
[Acidovorax citrulli AAC00-1]
Length = 948
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 10/133 (7%)
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFG 147
+ + + + F I V G AN++AIP ++ VV P L+ +L L S
Sbjct: 533 QGVVTLALTPLTVLLFGQISVVGFAANLVAIPWMTLVVTPLALLGVLWAPLWSAAAACLR 592
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
A GL + + + P + V + +L+V + +M
Sbjct: 593 PFAEGLQWL------AAWPWATVSLPAAPLWAGVAGMAGGMLLVM---RLPWALRLMGLP 643
Query: 208 TIIILFTFPYSFS 220
++ + + +
Sbjct: 644 LLLPVLWWHPARP 656
>gi|239501009|ref|ZP_04660319.1| DNA internalization-related competence protein ComEC/Rec2
[Acinetobacter baumannii AB900]
Length = 810
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 32/222 (14%), Positives = 71/222 (31%), Gaps = 19/222 (8%)
Query: 9 DPFPAETTIEGIARLSPPSGP--AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
P T + A L P F ++ + + I +P+ + S S
Sbjct: 346 QPIKPFTLLVYSASLLLLMDPFSVLSAGFWLSYGACFILIRIYQTIAQLPEQHFLSLSSK 405
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
F++++ + S + F I + NI+A+PI+ V+
Sbjct: 406 MI-----------FMSKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPIVGGVI 454
Query: 127 IPAGLIAILLM----ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT 182
+P ++A N+ F L I++ + + S +
Sbjct: 455 VPLNIMAACAWFVIKPFG--NMLFHFNDMLLSILLSCLGLLEKLSLPLQGISLTPLSLLA 512
Query: 183 IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLL 224
I +++ K + I+ + ++I+ ++L
Sbjct: 513 ISFAIIILFLPKGILPKTWGILCCLPLVIMNKTSQQIQLNIL 554
>gi|229157940|ref|ZP_04286012.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus ATCC 4342]
gi|228625500|gb|EEK82255.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus ATCC 4342]
Length = 693
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 52/139 (37%), Gaps = 7/139 (5%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG---LIAILLMILSLDNI 144
I ++ L+ HF Y + NIL +P LS +V+P LI I ++ +
Sbjct: 278 ISLISQLVSTPILLYHFGYFSPYSIFLNILYVPFLSLIVLPCSIVILICIPIIPFFAKRL 337
Query: 145 PFGVMAWGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNIRHIGS 202
V++ GL++ + + S+ G+ V + +++ + +
Sbjct: 338 A-DVLSIGLNLSNDFLIYCESLPFTRLNFGQTSILLVALYCVSIVSILMVWERRM-SKRI 395
Query: 203 IMIGITIIILFTFPYSFSP 221
+ I I + + P
Sbjct: 396 MFIASGIFLFICTCHYVYP 414
>gi|99034213|ref|ZP_01314285.1| hypothetical protein Wendoof_01000920 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 492
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 38/95 (40%), Gaps = 18/95 (18%)
Query: 26 PSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR 85
P PG F +FS+ +++ ++ + K + ++ +
Sbjct: 416 PEAILKPG-FQMSFSAVLALVASY-----------QINANKLFKIKIMKYFVSIMISSVI 463
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIP 120
A++ + + I +F+ + G+I N++AIP
Sbjct: 464 ASL------ATVPYTIYNFNYFSISGIITNLVAIP 492
>gi|229591210|ref|YP_002873329.1| hypothetical protein PFLU3775 [Pseudomonas fluorescens SBW25]
gi|229363076|emb|CAY50063.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 741
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHIAHRISV 165
I + AN++A+P +S VV+P L+ L+ L + + LD + + ++
Sbjct: 376 ISLSAPFANLVAVPWISLVVLPLALLGTALLPLPWVGDGLLWLAGGALDGLFNGLAWLAG 435
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITI 209
+ +P ++ ++ +L++ K R +G M+ + +
Sbjct: 436 YMPAWIPAEVPLGYWLVSLLGAVLLLLPKGVPFRLLGWPMLLLAV 480
>gi|225567875|ref|ZP_03776900.1| hypothetical protein CLOHYLEM_03948 [Clostridium hylemonae DSM
15053]
gi|225163353|gb|EEG75972.1| hypothetical protein CLOHYLEM_03948 [Clostridium hylemonae DSM
15053]
Length = 742
Score = 42.5 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 19/173 (10%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVI--PAGLIAILLMILSLDNIPFGVMAWGLDI 155
L+ +F+ P+Y L N+L +P++S ++ AG A L+ L + + V L +
Sbjct: 324 PVLLYYFYEFPLYSLFLNLLVVPLMSVLLFLGLAGSAAGLIAELPGEAVF-TVCRMILKL 382
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVT---IVVEFLLMVFCKTNIR--------HIGSIM 204
I + I P + V I++ F+L+++ + R +I +
Sbjct: 383 YEWICRTAAAFPAARIITGKPPLAGVVCYYILLAFVLLMWSRRGQRQNGVKREKYIAKYI 442
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNL----VALVDKNTLISNYSNPPSFIFS 253
I I + F P I G L + + + + + ++ F
Sbjct: 443 IISGITWVLAFLILLLP-AKIGRGGMLEITMLDVGQGDGIYMKSPSGTTYFFD 494
>gi|54309553|ref|YP_130573.1| Rec2-like protein [Photobacterium profundum SS9]
gi|46913989|emb|CAG20771.1| hypothetical Rec2-related protein [Photobacterium profundum SS9]
Length = 804
Score = 42.5 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 46/132 (34%), Gaps = 7/132 (5%)
Query: 83 EIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-L 141
++ A + F I + + N +++P +S + +P L AI + L
Sbjct: 392 KVLAQLQCVLLLFMLPLQWYWFGGISLLAPLINFVSVPWVSTLTVPLVLAAIATVWFPWL 451
Query: 142 DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF-CKTNIRHI 200
N+ + + W L +I +A + + ++ + R+
Sbjct: 452 SNVFWQLADWTLYPVIWLAE-----QSVGTWLSLSSAWLPFLIGGMAWAALGWFISWRNF 506
Query: 201 GSIMIGITIIIL 212
I I I I+ +
Sbjct: 507 KWIHISILIVFV 518
>gi|82703621|ref|YP_413187.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosospira multiformis ATCC 25196]
gi|82411686|gb|ABB75795.1| DNA internalization-related competence protein ComEC/Rec2
[Nitrosospira multiformis ATCC 25196]
Length = 766
Score = 42.5 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 43/149 (28%), Gaps = 4/149 (2%)
Query: 51 YFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY 110
+ P S + + + + + + L+ F I +
Sbjct: 325 WAVLSPGFWLSFGAIAVIMLVSVGRVGRPHWLSSWTTVQWAITLGLIPLLLAMFQQISLV 384
Query: 111 GLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF 170
IAN +AIP++S VV + LL L + LD + + +S A
Sbjct: 385 SPIANAVAIPLVSLVV----VPLALLATLPPLDFLLVPAHAALDGCMTVMEWLSNAPQAV 440
Query: 171 CIGRIPETSFVTIVVEFLLMVFCKTNIRH 199
+ P V + +
Sbjct: 441 WSQQAPPFWAVAVGTAGIFWTLLPGKWGW 469
>gi|228987578|ref|ZP_04147695.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228772152|gb|EEM20601.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 693
Score = 42.5 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
I ++ L+ HF Y + NIL +P LS +V+P
Sbjct: 278 ISLISQLVSTPILLYHFGYFSPYSIFLNILYVPFLSLIVLP 318
>gi|47569321|ref|ZP_00240005.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus G9241]
gi|47553992|gb|EAL12359.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus G9241]
Length = 773
Score = 42.5 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
I ++ L+ HF Y + NIL +P LS +V+P
Sbjct: 358 ISLISQLVSTPILLYHFGYFSPYSIFLNILYVPFLSLIVLP 398
>gi|213021524|ref|ZP_03335971.1| hypothetical protein Salmonelentericaenterica_01621 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 300
Score = 42.5 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 64/183 (34%), Gaps = 18/183 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 61 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 120
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + I ++ +L ++ + N+ + ++++ +
Sbjct: 121 NAL-----PQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTWPAVCLCGLLLMSWPLWRP- 174
Query: 221 PDLLISEKGNLVALVD-KNTLISNYSNPPSFIF----SQWKSALITPFHEAPHVQKEDLQ 275
I+ G V ++D L I W P ++ +L
Sbjct: 175 ----INASGWQVHMLDVGQGLAIAIVRGDKVILYDTGRAWPEGDSGQQVIIPWLRWHNLT 230
Query: 276 EKN 278
+
Sbjct: 231 PEG 233
>gi|126642645|ref|YP_001085629.1| competence factor involved in DNA uptake [Acinetobacter baumannii
ATCC 17978]
Length = 787
Score = 42.5 bits (98), Expect = 0.12, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 53/149 (35%), Gaps = 6/149 (4%)
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM-- 137
F++++ + S + F I + NI+A+PI+ V++P ++A
Sbjct: 385 FMSKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPIVGGVIVPLNIMAACAWFV 444
Query: 138 --ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
N+ F L I++ + + S + I +++ K
Sbjct: 445 IKPFG--NMLFHFNDMLLSILLSCLGLLEKLSLPLQGISLTPLSLLAISFAIIILFLPKG 502
Query: 196 NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
+ I+ + ++I+ ++L
Sbjct: 503 ILPKTWGILCCLPLVIMNKTSQQIQLNIL 531
>gi|189424818|ref|YP_001951995.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacter lovleyi SZ]
gi|189421077|gb|ACD95475.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacter lovleyi SZ]
Length = 814
Score = 42.5 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 66/187 (35%), Gaps = 12/187 (6%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LF+ +F + +S G P + E W++++ + F + A + T
Sbjct: 353 LFNLSFQLSF--LSLWGLLVLTPLLTKPVEHLLKQEWQRMTVL--FFAASLAAVLATMAP 408
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAW 151
AS FH + G+ AN++ +P+L + +A+ L S + W
Sbjct: 409 VLAS------FHQVSFTGIAANLVVVPLLGYGATVLATMAVPLSFFMPSFAALVLMFTGW 462
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
+ + I+ +TI + +L R ++ + +++
Sbjct: 463 LVQLSNTFVQWIARVPVLHSFSAGSTDVVITIALLAVLGFVHGRRTRMYAGSLLLVALVL 522
Query: 212 LFTFPYS 218
+ +P
Sbjct: 523 VHLWPGP 529
Score = 37.5 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 63/207 (30%), Gaps = 20/207 (9%)
Query: 3 SITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGY--------FYS 54
+I K + + I ++ P PG FD+ +GI A G+
Sbjct: 131 TIAKGHGSWLTGDRIRCPVKVRVPQLLGLPGEFDYGRYLTLRGIEATGWIPDAESVVLMR 190
Query: 55 IPKMIYSSESHNTWTWKKISSIK----QSFLNEIRANIGTYGSASASIFLIKHFHCIPVY 110
S ++ + I+ S + + T + +
Sbjct: 191 GAARASWQRSIDSLAMRSQEFIRQCLPDSAQRGVVLALATGNQQEVPPDVAAAYTRAG-- 248
Query: 111 GLIANILAIPILSFVVIPAG-LIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
+ +IL++ V+ A +I + ++L + + + L ++ +
Sbjct: 249 --VTHILSVSGFHVGVVTAVWVIMLRWLMLRWEWLALQL---DLRRAALLSTLPVMLLYL 303
Query: 170 FCIGRIPETSFVTIVVEFLLMVFCKTN 196
G P T+ +V +++
Sbjct: 304 VFTGGAPATARSVFMVAAVVLAAWSER 330
>gi|148750821|gb|ABR10034.1| hypothetical protein [Rickettsia rickettsii]
gi|148750823|gb|ABR10035.1| hypothetical protein [Rickettsia rickettsii]
gi|148750825|gb|ABR10036.1| hypothetical protein [Rickettsia rickettsii]
Length = 53
Score = 42.5 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 19/44 (43%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL 131
S + +I F Y + N++ +PI SF ++P L
Sbjct: 10 SSFLASIITAPVVINQFFIFATYSVPTNLIVVPITSFFLMPLAL 53
>gi|153213094|ref|ZP_01948632.1| Rec2-related protein [Vibrio cholerae 1587]
gi|124116141|gb|EAY34961.1| Rec2-related protein [Vibrio cholerae 1587]
Length = 580
Score = 42.5 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 72/187 (38%), Gaps = 20/187 (10%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-----SLDNIPFGVMAW 151
+ F + V ++ N++ IP S V++PA + +LLM++ +
Sbjct: 333 APVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVVWPSVAAAYWPWVDWTFL 392
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
LD + A G + + + ++ F+ + C + + ++
Sbjct: 393 PLDWALQFADVGWWVVPSKVQGVVAASVVILLLYRFMSLKACS----------LLLGMMG 442
Query: 212 LFTFPYSFSP----DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
L+ + S +P D+L G L +++++ Y S+ + ++I P +
Sbjct: 443 LWWWFPSLTPLWRMDVLDVGHG-LAIVIEQDEQAIVYDTGSSWPGGSYVQSVIEPILQQR 501
Query: 268 HVQKEDL 274
+++ D
Sbjct: 502 GLRQVDG 508
>gi|297205844|ref|ZP_06923239.1| competence protein ComEC [Lactobacillus jensenii JV-V16]
gi|297148970|gb|EFH29268.1| competence protein ComEC [Lactobacillus jensenii JV-V16]
Length = 750
Score = 42.5 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 51/134 (38%), Gaps = 8/134 (5%)
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM--ILSLDNIPFGVMAWGLDIIIHI 159
+F+ + V ++ NIL +P +FVV+P I I L L + + ++ G II
Sbjct: 370 FNFYQVNVLTVVFNILIVPYFNFVVMPLTFINIFLFNNFLVVSELFEKILEIGETIINSF 429
Query: 160 AHRISVAHNEFCIGRIPETS---FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
A G+I + I +L+ K ++ +I ++I +
Sbjct: 430 AKTNI---GMVIFGKISWWQCLFLLVISFGYLIFRLEKFKLKLPAITLIIAYLLIFISIH 486
Query: 217 YSFSPDLLISEKGN 230
+ + + G
Sbjct: 487 FPLQGQVTFIDVGQ 500
>gi|261880091|ref|ZP_06006518.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333246|gb|EFA44032.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 518
Score = 42.5 bits (98), Expect = 0.13, Method: Composition-based stats.
Identities = 13/106 (12%), Positives = 36/106 (33%), Gaps = 17/106 (16%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + + + Y+ I + + W W +
Sbjct: 357 GFQMSFMAV---LGILVYYRPIFHALTLQNTAVRWLWG-------------LTVVSLSAQ 400
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
+ ++ +F Y ++ NI+ +P + ++ ++ +L M +
Sbjct: 401 IGTAPLVMYYFGRFACYSILTNIIVVPAATLILY-GAVLMLLAMPV 445
>gi|315658137|ref|ZP_07911009.1| competence protein ComEC [Staphylococcus lugdunensis M23590]
gi|315496466|gb|EFU84789.1| competence protein ComEC [Staphylococcus lugdunensis M23590]
Length = 466
Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 81 LNEIRANIGT--YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
L+ ++A A + I HF+ + G++ N++ +P+ SF+ P L L+
Sbjct: 59 LSRLKAFFVITYIAQLGALLIQIYHFNQVQWIGILTNLIFVPLYSFIYFPLTLFFFLI 116
>gi|283138919|gb|ADB12522.1| ComEC/Rec2 [uncultured bacterium 9F08]
Length = 765
Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 39/105 (37%), Gaps = 9/105 (8%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F + +AN++A+P +S +V+P L+ ++L L P G GL +
Sbjct: 395 FQQGSLSSPLANLIAVPWVSLLVVPLTLLGVVL----LWWPPLGTALLGLAAQLLQWLWP 450
Query: 164 SVAHNEFCIGRIP----ETSFVTIVVEFLLMVFCKTN-IRHIGSI 203
+ I +P + + + + +R G +
Sbjct: 451 LLQWLSEAIPLLPGAAAGWTLLPALAGLAWLFAPHGWPLRPAGIV 495
>gi|322509087|gb|ADX04541.1| Competence factor involved in DNA uptake [Acinetobacter baumannii
1656-2]
gi|323519118|gb|ADX93499.1| metallo-beta-lactamase superfamily hydrolase [Acinetobacter
baumannii TCDC-AB0715]
Length = 804
Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 52/149 (34%), Gaps = 6/149 (4%)
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM-- 137
F+ ++ + S + F I + NI+A+PI+ V++P ++A
Sbjct: 402 FMGKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPIVGGVIVPLNIMAACAWFI 461
Query: 138 --ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
N+ F L I++ + + S + I +++ K
Sbjct: 462 VKPFG--NMLFHFNDMLLSILLSCLGLLEKLSLPLQGISLTPLSLLAISFAIIILFLPKG 519
Query: 196 NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
+ I+ + ++I+ ++L
Sbjct: 520 ILPKTWGILCCLPLVIMNKTSQQIQLNIL 548
>gi|184159174|ref|YP_001847513.1| metallo-beta-lactamase superfamily hydrolase [Acinetobacter
baumannii ACICU]
gi|183210768|gb|ACC58166.1| predicted hydrolase (metallo-beta-lactamase superfamily)
[Acinetobacter baumannii ACICU]
Length = 811
Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 52/149 (34%), Gaps = 6/149 (4%)
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM-- 137
F+ ++ + S + F I + NI+A+PI+ V++P ++A
Sbjct: 408 FMGKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPIVGGVIVPLNIMAACAWFI 467
Query: 138 --ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
N+ F L I++ + + S + I +++ K
Sbjct: 468 VKPFG--NMLFHFNDMLLSILLSCLGLLEKLSLPLQGISLTPLSLLAISFAIIILFLPKG 525
Query: 196 NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
+ I+ + ++I+ ++L
Sbjct: 526 ILPKTWGILCCLPLVIMNKTSQQIQLNIL 554
>gi|332876001|ref|ZP_08443787.1| DNA internalization competence protein ComEC/Rec2-like protein
[Acinetobacter baumannii 6014059]
gi|332735867|gb|EGJ66908.1| DNA internalization competence protein ComEC/Rec2-like protein
[Acinetobacter baumannii 6014059]
Length = 810
Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 52/149 (34%), Gaps = 6/149 (4%)
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM-- 137
F+ ++ + S + F I + NI+A+PI+ V++P ++A
Sbjct: 408 FMGKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPIVGGVIVPLNIMAACAWFI 467
Query: 138 --ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
N+ F L I++ + + S + I +++ K
Sbjct: 468 VKPFG--NMLFHFNDMLLSILLSCLGLLEKLSLPLQGISLTPLSLLAISFAIIILFLPKG 525
Query: 196 NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
+ I+ + ++I+ ++L
Sbjct: 526 ILPKTWGILCCLPLVIMNKTSQQIQLNIL 554
>gi|291297414|ref|YP_003508812.1| DNA internalization-related competence protein ComEC/Rec2
[Meiothermus ruber DSM 1279]
gi|290472373|gb|ADD29792.1| DNA internalization-related competence protein ComEC/Rec2
[Meiothermus ruber DSM 1279]
Length = 679
Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 27/197 (13%), Positives = 56/197 (28%), Gaps = 26/197 (13%)
Query: 21 ARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKM---IYSSESHNTWTWKKISSIK 77
L PS PG FD ++ +G+ + + + H + ++ +
Sbjct: 101 GHLLRPSNKRNPGGFDQQ--TWLRGLGVTAVLRARQVVHYEPLPAGPHQWLQKQLVAGLS 158
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
+ A + F +A+ LA+ L ++ G +LL
Sbjct: 159 APVAALVTALTLGERRELGEAYEA--FQQAG----LAHTLALSGLHVAIL-TGFFVLLLY 211
Query: 138 ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI 197
L P A + + + + P I+ F+LM
Sbjct: 212 PLGRWRYP--------------AALLLLLLYLWLVEPQPSLVRAVIMAGFVLMGLFMGRG 257
Query: 198 RHIGSIMIGITIIILFT 214
R + + + +
Sbjct: 258 RVAVLPALSLALFVQLL 274
>gi|226355223|ref|YP_002784963.1| competence protein ComEC/Rec2 [Deinococcus deserti VCD115]
gi|226317213|gb|ACO45209.1| putative competence protein ComEC/Rec2; putative membrane protein
[Deinococcus deserti VCD115]
Length = 771
Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 66/184 (35%), Gaps = 11/184 (5%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + + F ++ + S+ + + +++ + + A +GT +++
Sbjct: 356 FPLWLTDVGFQLSFLAVLALTQSARLADRLPERWPRALRLALSATVLAELGTLPVIAST- 414
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F +P+ GL AN+LA +++ +V P G +A LL L + L ++
Sbjct: 415 -----FGELPLVGLPANLLAGGVMAVLV-PLGFVAGLLGPLG---GVVNLAVEPLAGLLL 465
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC-KTNIRHIGSIMIGITIIILFTFPY 217
+ G+I + + L V + +R + + L P
Sbjct: 466 GIVEVFGRAPVLSWGQIAPVGVASYALCALAGVLWLRGQVRAQVVLGTVLACTALTLLPG 525
Query: 218 SFSP 221
P
Sbjct: 526 QLRP 529
>gi|119897803|ref|YP_933016.1| putative DNA uptake/competence protein [Azoarcus sp. BH72]
gi|119670216|emb|CAL94129.1| putative DNA uptake/competence protein [Azoarcus sp. BH72]
Length = 769
Score = 42.1 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 52/151 (34%), Gaps = 12/151 (7%)
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
I + + + + L+ FH P+ +AN +AIP++SFVV P L+A
Sbjct: 367 GRIGPAARWSAAVRLQLGITLATVPLLVALFHSFPLVSPLANAVAIPLVSFVVTPLALLA 426
Query: 134 IL----LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL 189
++ L++ + + VM W + ++ +
Sbjct: 427 MVLPWDLLLEAAHWVTARVMDWSV--------LLADLPFALWRQAAAPGWALAAGAVGAW 478
Query: 190 MVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
M + ++ + +++ + P
Sbjct: 479 MWLLPRPLPGRAGALLMVGLLLGWQPPRPAP 509
>gi|152969497|ref|YP_001334606.1| recombination protein [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|150954346|gb|ABR76376.1| putative recombination protein, metallo-hydrolase domain
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
Length = 754
Score = 42.1 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 62/126 (49%), Gaps = 19/126 (15%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
FH + + + AN+LA+P+++ + +P L A+L+ + D ++ ++ +A
Sbjct: 380 FHGVSLTSMAANLLAVPLVTLLAVPLILTAMLVHLSGPDI---------VESLLWLAADR 430
Query: 164 SVAHNEFCIGRIPET-------SFVTIVVEFLLMVFCK-TNIRHIGSIMIGITIIILFTF 215
+A + + R+P+ ++ +LL++ + + RH S + ++++ L T
Sbjct: 431 VLALLFWGLRRLPDGWLTLDARWLWISILPWLLVMGWRFQSWRH--SPALCLSVLFLLTR 488
Query: 216 PYSFSP 221
P+S P
Sbjct: 489 PFSRQP 494
>gi|254226046|ref|ZP_04919645.1| ComEC/rec2 family protein [Vibrio cholerae V51]
gi|125621429|gb|EAZ49764.1| ComEC/rec2 family protein [Vibrio cholerae V51]
Length = 752
Score = 42.1 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 71/187 (37%), Gaps = 20/187 (10%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-----SLDNIPFGVMAW 151
+ F + V ++ N++ IP S V++PA + +LLM++ +
Sbjct: 376 APVTAYFFGGLSVTAVLYNLVFIPWFSLVIVPALFLGLLLMVVWPSVAAAYWPWVDWTFL 435
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
LD + A G + + + + F+ + C + + ++
Sbjct: 436 PLDWALQFADVGWWVVPSKVQGVVAASVAILLHYRFMSLKACS----------LLLGMMG 485
Query: 212 LFTFPYSFSP----DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
L+ + S +P D+L G L +++++ Y S+ + ++I P +
Sbjct: 486 LWWWFPSLTPLWRMDVLDVGHG-LAIVIEQDERAIVYDTGSSWPGGSYVQSVIEPILQQR 544
Query: 268 HVQKEDL 274
+++ D
Sbjct: 545 GLRQVDG 551
>gi|315924406|ref|ZP_07920628.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudoramibacter alactolyticus ATCC 23263]
gi|315622285|gb|EFV02244.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudoramibacter alactolyticus ATCC 23263]
Length = 731
Score = 42.1 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 12/106 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + +G ++Y + + QS I A IGT +
Sbjct: 292 SFQMSFGA------VLGIILLYRPLVYRVTRGLDIRSRCGKWLVQSIGLTIAATIGTLPA 345
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
+ +F + V GL+ N+L +P++ ++I A ++ LM+
Sbjct: 346 T------LYYFQTVNVIGLVGNLLVVPLVGILLILAFVVIPFLMVF 385
>gi|297584664|ref|YP_003700444.1| DNA internalization-like competence protein ComEC/Rec2 [Bacillus
selenitireducens MLS10]
gi|297143121|gb|ADH99878.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
selenitireducens MLS10]
Length = 769
Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 33/255 (12%), Positives = 77/255 (30%), Gaps = 46/255 (18%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG---LIAILLMI------ 138
+ A+ +I F ++ + N+L +P ++ ++P + + L
Sbjct: 367 VTLAAQIIAAPVMISIFFEWSLFAVFMNLLMVPAVTIFLLPGAFLTVFGLWLWPSVTVKV 426
Query: 139 LSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL-LMVFCKTNI 197
L + VM ++ + A++ G+ + + + + +
Sbjct: 427 TGLTEMLLSVMD---GFLLWTSE---SAYSSLLFGKPDTWMLLVLCAGSAGFFLLWEKSG 480
Query: 198 RHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVD---KNTLISNYSNPPSFIFSQ 254
R+ + G T+ + P L ++G V +D + + +
Sbjct: 481 RYAFTK--GFTVFLAVLTFVYVQPYL---DRGATVTFLDVGQGDAAVIELPHRQG----- 530
Query: 255 WKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGV 314
I P + ++ LR G D++V
Sbjct: 531 ---VYIVDTGGVPSWHHHESSGPFDYDIEPFLRGQ--------------GISSVDLLVLT 573
Query: 315 LKRKDMIRLSCQLSD 329
+D + C+LSD
Sbjct: 574 HGHEDHVGEVCKLSD 588
>gi|146311089|ref|YP_001176163.1| hypothetical protein Ent638_1432 [Enterobacter sp. 638]
gi|145317965|gb|ABP60112.1| DNA internalization-related competence protein ComEC/Rec2
[Enterobacter sp. 638]
Length = 754
Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 49/119 (41%), Gaps = 8/119 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAIL--LMILSL-DNIPFGVMAWGLDIIIHIA 160
FH + + L+ANI A+P+++F+ +P L +L L L L + + + L ++ +
Sbjct: 380 FHGMSISSLVANIFAVPLVTFISVPLILAGMLLHLCPLPLFEECVWLLADKSLAVLFWL- 438
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
+ I E ++ +L ++ + + ++ ++L +
Sbjct: 439 ----LKGLPDGWIDIDERWLPVTLLPWLAIIGWRFRAWVSAPAISIVSSVLLTYLLWRP 493
>gi|193078092|gb|ABO13027.2| competence factor involved in DNA uptake [Acinetobacter baumannii
ATCC 17978]
Length = 810
Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 53/149 (35%), Gaps = 6/149 (4%)
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM-- 137
F++++ + S + F I + NI+A+PI+ V++P ++A
Sbjct: 408 FMSKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPIVGGVIVPLNIMAACAWFV 467
Query: 138 --ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
N+ F L I++ + + S + I +++ K
Sbjct: 468 IKPFG--NMLFHFNDMLLSILLSCLGLLEKLSLPLQGISLTPLSLLAISFAIIILFLPKG 525
Query: 196 NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
+ I+ + ++I+ ++L
Sbjct: 526 ILPKTWGILCCLPLVIMNKTSQQIQLNIL 554
>gi|186476201|ref|YP_001857671.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia phymatum STM815]
gi|184192660|gb|ACC70625.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia phymatum STM815]
Length = 843
Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 31/210 (14%), Positives = 68/210 (32%), Gaps = 13/210 (6%)
Query: 5 TKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSY----YKGISAIGYFYSIPKMIY 60
++ P G+ L P F +F + + + +
Sbjct: 337 GRRVAPSVVLAWALGLVLLVDPWA-VVSAGFWLSFCAVGAILFAMSGHARIARNTSRDAG 395
Query: 61 SSESHNTWTWKKISSIKQSFLN-----EIRANIGTYGSASASIFLIKHFHCIPVYGLIAN 115
E T+ + +++ A + + + + + F IP+ G AN
Sbjct: 396 LEEGERTFVMRCGDALRLCIGGLNERIRSGARVQLAVTIALAPLTVCFFSQIPLIGPFAN 455
Query: 116 ILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD-IIIHIAHRISVAHNEFCIGR 174
AIP +S +V PA +IA + + D + F L+ ++ + S A + + +
Sbjct: 456 AFAIPWVSVLVTPA-VIAGVALPAPFDALAFRAAHHLLECLVAGLQLFSSAAWTLWPLPQ 514
Query: 175 IPETSFVTIVVEFLLMVFCKTN-IRHIGSI 203
+ + V + +R +
Sbjct: 515 PSAWALASAGVGVAWCLAPPGWPLRWAAPL 544
>gi|84623835|ref|YP_451207.1| competence protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|84367775|dbj|BAE68933.1| competence protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 802
Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 39/115 (33%), Gaps = 9/115 (7%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNI 144
+ T + + F + G AN++AIP +FVV+P L+ L +
Sbjct: 401 SAQTVATVGLLPLTVSLFGQASLVGPFANLVAIPWWTFVVVPLCLVGTALEAIYPGAGVW 460
Query: 145 PFGVMAWGLDII----IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + W ++ + + + + + ++ ++ +
Sbjct: 461 AWQLAGWCFELTWPGFVWLGRTTVALWW---VPESDGVALIAALLGAFWLLLPRG 512
>gi|238786000|ref|ZP_04629962.1| Membrane protein, suppressor for copper-sensitivity B [Yersinia
bercovieri ATCC 43970]
gi|238713104|gb|EEQ05154.1| Membrane protein, suppressor for copper-sensitivity B [Yersinia
bercovieri ATCC 43970]
Length = 686
Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 42/295 (14%), Positives = 103/295 (34%), Gaps = 42/295 (14%)
Query: 100 LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI-IIH 158
+ HF + L+A + P L + L L F + G+ + +
Sbjct: 409 MAGHFGQGALATLLATPCSAPFLG-----TAVAFALAAPLPALWGIFTALGVGMSLPWLA 463
Query: 159 IAHRISVA-----HNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
+A ++A + I + + L+ ++I + I+ +++
Sbjct: 464 VAAWPTLALCLPRPGRWMIHLRIAMGVLMLASSLWLLTLMISHIGLLAVIITAGVLLLAL 523
Query: 214 T----FPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHV 269
+ Y +++S L++++ L+ S + W+ P
Sbjct: 524 LLAIGWRYGARVAIIVS----LISVLIIGALLL----AGSLTANLWRQ---------PLH 566
Query: 270 QKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSD 329
Q +S++K+ LR + R F+ + +CV C + + V + +D ++ + Q D
Sbjct: 567 DNIPWQPLTESAIKQALREHK-RVFVDVTADWCVTCKVNKIHVLM---RDDVQQALQAPD 622
Query: 330 ILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIEN 384
+ +R T+ L+++G++ I ++ ++
Sbjct: 623 --VVALRGDWTRPSAAITQF----LRERGTVAIPFNQIYGPQQPQGVVLSPLLDR 671
>gi|269122260|ref|YP_003310437.1| ComEC/Rec2-related protein [Sebaldella termitidis ATCC 33386]
gi|268616138|gb|ACZ10506.1| ComEC/Rec2-related protein [Sebaldella termitidis ATCC 33386]
Length = 454
Score = 42.1 bits (97), Expect = 0.16, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 13/111 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIR--ANIGTY 91
LFD +F Y + +I + Y + + +YS++ IK +F+N I A +
Sbjct: 282 LFDISFQLSYGAVGSILFIYPVFERLYSAK----------CRIKDNFINHILKTALLSFV 331
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD 142
+ +F +PV+ + NI+ IP+ ++I + +LL + ++
Sbjct: 332 IQIMTFPVFLYNFQTMPVFSFLCNIVGIPL-GTLLIQLIFLVLLLNVFGIE 381
>gi|312869044|ref|ZP_07729221.1| DNA internalization competence protein ComEC/Rec2-like protein
[Lactobacillus oris PB013-T2-3]
gi|311095470|gb|EFQ53737.1| DNA internalization competence protein ComEC/Rec2-like protein
[Lactobacillus oris PB013-T2-3]
Length = 720
Score = 42.1 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 41/103 (39%), Gaps = 13/103 (12%)
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH--- 158
FH + L+A+ + IP+ S +V P + + + F V+ ++ ++
Sbjct: 331 FEFH---LLSLVASYVMIPLFSLLVFPLVVFSAMAYHF------FPVLGELVNALLSGFQ 381
Query: 159 -IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHI 200
+ ++ E G+ P + + + L ++ R++
Sbjct: 382 IVLFWLASLPGEIHFGKPPLCFALVLFLATLWLLQRPRRARYL 424
>gi|188576504|ref|YP_001913433.1| DNA internalization-related competence protein ComEC/Rec2
[Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520956|gb|ACD58901.1| DNA internalization-related competence protein ComEC/Rec2
[Xanthomonas oryzae pv. oryzae PXO99A]
Length = 776
Score = 42.1 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 39/115 (33%), Gaps = 9/115 (7%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNI 144
+ T + + F + G AN++AIP +FVV+P L+ L +
Sbjct: 375 SAQTVATVGLLPLTVSLFGQASLVGPFANLVAIPWWTFVVVPLCLVGTALEAIYPGAGVW 434
Query: 145 PFGVMAWGLDII----IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + W ++ + + + + + ++ ++ +
Sbjct: 435 AWQLAGWCFELTWPGFVWLGRTTVALWW---VPESDGVALIAALLGAFWLLLPRG 486
>gi|166368608|ref|YP_001660881.1| competence protein [Microcystis aeruginosa NIES-843]
gi|166090981|dbj|BAG05689.1| competence protein [Microcystis aeruginosa NIES-843]
Length = 719
Score = 42.1 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 47/122 (38%), Gaps = 13/122 (10%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
I + L+ F+ I +Y + NI+ P+++ + L + L L
Sbjct: 387 PIAISLAATLWTMPLLMFTFNSIALYNIPINIITTPLVTLI----SLGGVFTAFLGLIYP 442
Query: 145 PFG-----VMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVF---CKT 195
P G ++ + L++++ I S+ + + G++ + I + L+ F +
Sbjct: 443 PLGSISASILYYPLELLLQITTFFSLLPFSTYSTGKLSLGVMLIIYICLTLICFNIWFRQ 502
Query: 196 NI 197
Sbjct: 503 RW 504
>gi|113970758|ref|YP_734551.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella sp. MR-4]
gi|113885442|gb|ABI39494.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella sp. MR-4]
Length = 773
Score = 42.1 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 62/167 (37%), Gaps = 17/167 (10%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + ++ I Y + S E+ T+ + + I+ + I+ + +I
Sbjct: 325 FWLSFCALAIILYTLESAPVAQSIENKATFMVR--ARIRFAQFWSIQWRLSLVLGLVQAI 382
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F F + V+ L N+L +P S +VIP ++A+++ + +
Sbjct: 383 F----FGGLSVHSLWINMLVVPWFSLIVIPLSMLALII------WWIGTLFGQSWFGFFN 432
Query: 159 IAHRISVAHNEF--CIGRIPETSFVT---IVVEFLLMVFCKTNIRHI 200
+A + + + G +P + ++ L + R++
Sbjct: 433 LADVTLLPYGKLLELSGDLPAHWYAVSETLLAGSLCALLAMILWRYL 479
>gi|90413110|ref|ZP_01221107.1| hypothetical Rec2-related protein [Photobacterium profundum 3TCK]
gi|90325953|gb|EAS42399.1| hypothetical Rec2-related protein [Photobacterium profundum 3TCK]
Length = 819
Score = 42.1 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 44/132 (33%), Gaps = 7/132 (5%)
Query: 83 EIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-L 141
++ A + F I + N +++P +S + +P L AI + L
Sbjct: 392 KVLAQLQFVLLLFMLPLQWYWFGGISLLAPFINFVSVPWVSTLTVPLVLAAIATVWFPWL 451
Query: 142 DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF-CKTNIRHI 200
N+ + W L +I +A + + ++ + R+
Sbjct: 452 SNVFWQFADWTLYPVIWLAE-----QSVGTWLSLSSAWLPFLIGGMAWAALGWFVSWRNF 506
Query: 201 GSIMIGITIIIL 212
I I I I+ +
Sbjct: 507 KWIHISIFIVFV 518
>gi|58581923|ref|YP_200939.1| competence protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|58426517|gb|AAW75554.1| competence protein [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 807
Score = 42.1 bits (97), Expect = 0.17, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 39/115 (33%), Gaps = 9/115 (7%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNI 144
+ T + + F + G AN++AIP +FVV+P L+ L +
Sbjct: 406 SAQTVATVGLLPLTVSLFGQASLVGPFANLVAIPWWTFVVVPLCLVGTALEAIYPGAGVW 465
Query: 145 PFGVMAWGLDII----IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + W ++ + + + + + ++ ++ +
Sbjct: 466 AWQLAGWCFELTWPGFVWLGRTTVALWW---VPESDGVALIAALLGAFWLLLPRG 517
>gi|166712276|ref|ZP_02243483.1| competence protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 802
Score = 42.1 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 39/115 (33%), Gaps = 9/115 (7%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNI 144
+ T + + F + G AN++AIP +FVV+P L+ L +
Sbjct: 401 SAQTVATVGLLPLTVSLFGQASLVGPFANLVAIPWWTFVVVPLCLVGTALEAIYPGAGVW 460
Query: 145 PFGVMAWGLDII----IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + W ++ + + + + + ++ ++ +
Sbjct: 461 AWQLAGWCFELTWPGFVWLGRTTVALWW---VPESDGVALIAALLGAFWLLLPRG 512
>gi|148658328|ref|YP_001278533.1| hypothetical protein RoseRS_4240 [Roseiflexus sp. RS-1]
gi|148570438|gb|ABQ92583.1| hypothetical protein RoseRS_4240 [Roseiflexus sp. RS-1]
Length = 502
Score = 41.7 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 46/128 (35%), Gaps = 4/128 (3%)
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI 172
A +L I + V IPA L+ ++L + + G I + + ++ +
Sbjct: 128 FALVLMIVSFATVAIPAALLGVVLYRF----LELFDLGMGWRATIALIYGLATPAFPYSN 183
Query: 173 GRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+ ++ +VF R M+ + ++ +T + L+++ G
Sbjct: 184 AFMGHQQVAALLFGAFWLVFLIGRQRLSPRWMLVVGFLLGWTLITEYPAALIVAGIGLYA 243
Query: 233 ALVDKNTL 240
+V +
Sbjct: 244 LIVLPDRR 251
>gi|304436888|ref|ZP_07396852.1| DNA internalization-related competence protein ComEC/Rec2
[Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304370087|gb|EFM23748.1| DNA internalization-related competence protein ComEC/Rec2
[Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 814
Score = 41.7 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 20/149 (13%), Positives = 53/149 (35%), Gaps = 13/149 (8%)
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL 136
+ L + +I L +F+ + + L+AN++ +PI+ ++I I+
Sbjct: 387 RLPRLVSMAFSITIAAQLMVLPVLAWYFNQVSISALLANLIVVPIVELIIIMGLFAGIVT 446
Query: 137 MILSLDNIPFG-----VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
+L L ++ ++ +A ++ ++ + + V V L++
Sbjct: 447 YLLPLLGGILFAADSVLLGISFELTRALA---ALPLSKVWLPSMGLFPSVCYYVVILILC 503
Query: 192 F---CKTNI--RHIGSIMIGITIIILFTF 215
+ I R + I + +
Sbjct: 504 APSEMRRKILSRLLAYRHIVAVLCLALLV 532
Score = 39.8 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 26/181 (14%), Positives = 62/181 (34%), Gaps = 8/181 (4%)
Query: 13 AETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT--W 70
I ++ P G PG D +GI+A + I S + + W
Sbjct: 156 IGDRITAEGKIRRPHGYQNPGQIDTALLLRTQGITASLSAHRGSVSIESRDDISLWEQWM 215
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
++ + I+ +L +RA + +A+ L + I L A I+ + +
Sbjct: 216 RRAAEIRTHYLEHMRAVMPHTDAAAIFAMLFGGYEGIDPALLEA-YTTTGIVHILSVSGS 274
Query: 131 LIAILLMILSLDNIPFGVM-AWGLDIIIHIAHR----ISVAHNEFCIGRIPETSFVTIVV 185
I+++ +++ + + ++ + G + +F+ +V+
Sbjct: 275 HISLIAAVIAWIAVILRLPRGLSAAAVLSAIFFYVLLAGMVPPAVRSGIMGGAAFIGLVL 334
Query: 186 E 186
Sbjct: 335 G 335
>gi|138896088|ref|YP_001126541.1| DNA internalization-related competence protein ComEC [Geobacillus
thermodenitrificans NG80-2]
gi|134267601|gb|ABO67796.1| DNA internalization-related competence protein ComEC [Geobacillus
thermodenitrificans NG80-2]
Length = 748
Score = 41.7 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 57/149 (38%), Gaps = 7/149 (4%)
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
+ +S + + +A L+ HF+ I ++ + N+L +P+ SFV++P
Sbjct: 342 ALAARSMIGRLC-ETALAAQLAALPILLYHFYEISIWSVGLNVLFVPLYSFVILPLA-FV 399
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF--VTIVVEFLLMV 191
+ + + + +++ ++ SV H + PE V + + ++
Sbjct: 400 VAALPF---PPLVWLFSCLIELTNNVVRFFSVDHPLTIVLGRPEPWCLAVYVAAVVVALL 456
Query: 192 FCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ G + + +++ PY
Sbjct: 457 LWERGQLFRGLAAVAMAMVLQLVSPYVDP 485
>gi|325928368|ref|ZP_08189563.1| DNA internalization-related competence protein ComEC/Rec2
[Xanthomonas perforans 91-118]
gi|325541244|gb|EGD12791.1| DNA internalization-related competence protein ComEC/Rec2
[Xanthomonas perforans 91-118]
Length = 848
Score = 41.7 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 40/114 (35%), Gaps = 9/114 (7%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNI 144
+ T + + F + G AN++AIP +FVV+P L+ L +
Sbjct: 401 SAQTVATVGLLPLTVSLFGQASLVGPFANLVAIPWWTFVVVPLCLLGTALEAIYPGTGVW 460
Query: 145 PFGVMAWGLDII----IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
+ + W ++ + + H + + + ++ ++ +
Sbjct: 461 AWQLAGWCFELTWPGFVWLGHTAVALWW---VPESDGVALIAALLGAFWLLLPR 511
>gi|302874285|ref|YP_003842918.1| ComEC/Rec2-related protein [Clostridium cellulovorans 743B]
gi|307689451|ref|ZP_07631897.1| ComEC/Rec2-related protein [Clostridium cellulovorans 743B]
gi|302577142|gb|ADL51154.1| ComEC/Rec2-related protein [Clostridium cellulovorans 743B]
Length = 599
Score = 41.7 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 72/177 (40%), Gaps = 20/177 (11%)
Query: 43 YKGISAIGY---FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIF 99
Y+ I A G+ F + +I + + +K S I++S + + +
Sbjct: 285 YEIIGA-GFNLSFLATLGIIIFNSKIERYLYKVPSPIRESLA------LDFSSQVTTIPY 337
Query: 100 LIKHFHCIPVYGLIANILAIPILSFVVIPA--GLIAILLMI-LSLDNIPFGVMAWGLDII 156
++ F+ I + ++AN++ +P+ S ++I ++A L + V+ + +
Sbjct: 338 MLMVFNNIAIGSVLANLVLVPVYSLIIIVGNCLIVAYFLTPVFNCIAYLVQVLFFSVRG- 396
Query: 157 IHIAHRISVAHNE-FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
I+H +++ G S + I F+ K R+ + + + ++++
Sbjct: 397 --ISHFLNMIMPRKLHGGYFEGISMLLIYTSFI---LYKRGYRNFKCLPVILCLMMI 448
>gi|260597311|ref|YP_003209882.1| hypothetical protein CTU_15190 [Cronobacter turicensis z3032]
gi|260216488|emb|CBA29647.1| Uncharacterized protein ycaI [Cronobacter turicensis z3032]
Length = 752
Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 52/124 (41%), Gaps = 15/124 (12%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
FH I + L+AN++A+P+++F+ +P L A++L + L L+ +
Sbjct: 378 FHGISLTSLLANLVAVPVVTFIAVPLVLAAMILDLAQLTW---------LEAGAGLLADR 428
Query: 164 SVAHNEFCIGRIPETSFVT-----IVVEFLLMVFCKTNIRHIGSIMIGITIII-LFTFPY 217
++A + + ++P + ++ + +I++ L T+P+
Sbjct: 429 ALAALFWLLRQLPPGWLSLDQRYQWLTLAPWIMVIAWRAGWHRISPVTCSILLGLLTWPF 488
Query: 218 SFSP 221
P
Sbjct: 489 WQKP 492
>gi|313205206|ref|YP_004043863.1| comec/rec2-related protein [Paludibacter propionicigenes WB4]
gi|312444522|gb|ADQ80878.1| ComEC/Rec2-related protein [Paludibacter propionicigenes WB4]
Length = 685
Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 40/102 (39%), Gaps = 12/102 (11%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F Y + +I +F + ++ + I + ++
Sbjct: 352 LYDVGFQLSYAAVLSIIFF----------QPIVDKLYQPTNKITRMVWEIF--SVSIAAQ 399
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ F + +F P Y L+ N +AIP+ S V+ A + ++
Sbjct: 400 LGTTPFTLYYFQQFPSYFLLTNFIAIPLSSLVIYLAIFLFMV 441
>gi|78047807|ref|YP_363982.1| competence-related DNA-transformation transporter [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|78036237|emb|CAJ23928.1| Competence-related DNA-transformation transporter [Xanthomonas
campestris pv. vesicatoria str. 85-10]
Length = 849
Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 40/114 (35%), Gaps = 9/114 (7%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNI 144
+ T + + F + G AN++AIP +FVV+P L+ L +
Sbjct: 401 SAQTVATVGLLPLTVSLFGQASLVGPFANLVAIPWWTFVVVPLCLLGTALEAIYPGTGVW 460
Query: 145 PFGVMAWGLDII----IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
+ + W ++ + + H + + + ++ ++ +
Sbjct: 461 AWQLAGWCFELTWPGFVWLGHTAVALWW---VPESDGVALIAALLGAFWLLLPR 511
>gi|21325118|dbj|BAB99740.1| Predicted multitransmembrane, metal-binding protein
[Corynebacterium glutamicum ATCC 13032]
Length = 513
Score = 41.7 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 31/213 (14%), Positives = 73/213 (34%), Gaps = 32/213 (15%)
Query: 55 IPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA 114
+ ++Y + WK + ++F I A++ T + I + ++A
Sbjct: 278 LQPLLYRAIGPPLAVWKVPDIVVRAFAVSIAADLVTIPIIALMA------RQISLVAVLA 331
Query: 115 NIL---AIPILSFVVIPAGLIAIL--LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
N+L A+P ++ + GLIA+L L+ ++ ++ I H+A N
Sbjct: 332 NVLVELAVPPITLL----GLIAVLASLLPWPVEYPLLKIIEPFTWWIHHVAKWCQQLPNS 387
Query: 170 FCIGRIPETSFVTIVVEFLLMV--FCKTNIRHIGSIMIGITIIILFTFPYSFSPD----- 222
+ + +V K +R + + + + D
Sbjct: 388 TLEISAGWAGIAWACMAAVWVVVIIYKGYVRTLAVCCVCFFLFGAWNNRLPAQIDPTELR 447
Query: 223 -LLISEK---------GNLVALVDKNTLISNYS 245
++I++ L+ + D + +S+
Sbjct: 448 FVIIADDSELTDVPEHAELIIVEDPHGSMSDRP 480
>gi|325123110|gb|ADY82633.1| DNA internalization-related competence protein ComEC/Rec2
[Acinetobacter calcoaceticus PHEA-2]
Length = 810
Score = 41.7 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 49/134 (36%), Gaps = 3/134 (2%)
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
++I + ++ F I NI+A+P+L V++P + A + ++
Sbjct: 408 LFSKILIESQGKIFIALCPLMLIFFQQISWVAPFTNIIAVPLLGGVIVPLNIFAACVWLI 467
Query: 140 --SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI 197
S N+ F + + I++ + + + V + +++ + +
Sbjct: 468 FKSFGNLLFQINDVLISIVLSCFNLLEKLSLPLQGFSLTPLDLVCLSFVIIILFLPRGVL 527
Query: 198 -RHIGSIMIGITII 210
+ G I II
Sbjct: 528 PKSWGLICCLPLII 541
>gi|160872317|ref|ZP_02062449.1| DNA internalization-related competence protein ComEC/Rec2
[Rickettsiella grylli]
gi|159121116|gb|EDP46454.1| DNA internalization-related competence protein ComEC/Rec2
[Rickettsiella grylli]
Length = 782
Score = 41.7 bits (96), Expect = 0.22, Method: Composition-based stats.
Identities = 34/200 (17%), Positives = 63/200 (31%), Gaps = 29/200 (14%)
Query: 30 AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIG 89
F +F + + FYSI + S +W I+ +
Sbjct: 351 VLSASFWLSFFAVFL------IFYSISNRLKSFNKWESWC-------------RIQITLS 391
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV--IPAGLIAILLMILSLDNIPFG 147
+ +F FH I AN++AIP++ F++ + + L+ L +I
Sbjct: 392 LGLIPLSLLF----FHQISWVSFFANLIAIPLIGFIILPLSLFGSLLSLISFRLGSISLI 447
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV-EFLLMVFCKT-NIRHIGSIMI 205
+ L+ + I S + + LL++ K R +G I
Sbjct: 448 LSEHLLEFLWKILRFCSEIPFTQYHSYLSMRWIFIASLIAVLLLLGPKGIPGRWLG--FI 505
Query: 206 GITIIILFTFPYSFSPDLLI 225
+ F D+ I
Sbjct: 506 WALPLFFFEAKGPQQGDVWI 525
>gi|293609879|ref|ZP_06692181.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828331|gb|EFF86694.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 810
Score = 41.7 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 49/134 (36%), Gaps = 3/134 (2%)
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
++I + ++ F I NI+A+P+L V++P + A + ++
Sbjct: 408 LFSKILIESQGKIFIALCPLMLIFFQQITWVAPFTNIIAVPLLGGVIVPLNIFAACVWLI 467
Query: 140 --SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI 197
S N+ F + + I++ + + + V + +++ + +
Sbjct: 468 FNSFGNLLFQISDVLISIVLSCFNLLEKLSLPLQGFSLTPLDLVCLSFVIIILFLPRGVL 527
Query: 198 -RHIGSIMIGITII 210
+ G I II
Sbjct: 528 PKSWGLICCLPLII 541
>gi|156973824|ref|YP_001444731.1| hypothetical protein VIBHAR_01534 [Vibrio harveyi ATCC BAA-1116]
gi|156525418|gb|ABU70504.1| hypothetical protein VIBHAR_01534 [Vibrio harveyi ATCC BAA-1116]
Length = 752
Score = 41.3 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 67/182 (36%), Gaps = 18/182 (9%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI--LSLDNIPFGVMAWGLDI 155
F + + N++ IP F+V+P +A+++ L + + ++ W +
Sbjct: 376 PISGAFFSGTSLVSIAYNLVFIPWFGFLVVPLMFLALIVTPISFQLAGMLWQLVDW---V 432
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT---NIRHIGSIMIGITIIIL 212
++ + + A + +P ++ + + + +++ + +
Sbjct: 433 LLSLTWSLQFAVGSWHFVSLP---LTLTILAVAICGLLRRFLNRGSFVTLVILVTGVALF 489
Query: 213 F-TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
+ S+ D+L G L L++K+ ++ Y + W S I +P + +
Sbjct: 490 YERTTNSWRVDVLDVGHG-LAVLIEKHGKVTLYDTGKA-----WNSGSIAQQAISPILHR 543
Query: 272 ED 273
Sbjct: 544 RG 545
>gi|330817646|ref|YP_004361351.1| DNA internalization-related competence protein ComEC/Rec
[Burkholderia gladioli BSR3]
gi|327370039|gb|AEA61395.1| DNA internalization-related competence protein ComEC/Rec
[Burkholderia gladioli BSR3]
Length = 830
Score = 41.3 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 47/136 (34%), Gaps = 3/136 (2%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
A + + + F + F +P+ G +AN AIP + +V P ++A + + LD +
Sbjct: 429 ARVQYAVTLGLAPFTVVWFGQVPLAGALANAFAIPWVGSLVTPI-VLAGMALPAPLDVLV 487
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
L + + ++ + +P S+ ++ +
Sbjct: 488 LRAAHALLTAMFAL--FEAMPAGLAAVAEMPSPSWFALLAALAGTGWALMPRGWPLRFAA 545
Query: 206 GITIIILFTFPYSFSP 221
+ + L P P
Sbjct: 546 PLAWLPLVLPPSQAPP 561
>gi|225027578|ref|ZP_03716770.1| hypothetical protein EUBHAL_01835 [Eubacterium hallii DSM 3353]
gi|224955094|gb|EEG36303.1| hypothetical protein EUBHAL_01835 [Eubacterium hallii DSM 3353]
Length = 816
Score = 41.3 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 56/183 (30%), Gaps = 24/183 (13%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTW-------KKISSIKQSFLNEIRANIGTYGSAS 95
+ I +IG I K ++ S N + I+Q+F I + S
Sbjct: 376 FASIFSIGIILPIAKELWEKRSQNRLVAGEFPTESPRRKIIRQAFFANIVIS------MS 429
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
+ L++ F+ Y ++ N+ IP +S P + A+L +L + + +
Sbjct: 430 ITPLLLRFFYQWSPYSILLNMFVIPAMS----PLLISAVLGGLLGFFSYVSAFLGCIPAV 485
Query: 156 II-----HIAHRISVAHNEFCIGRIPETS--FVTIVVEFLLMVFCKTNIRHIGSIMIGIT 208
++ I + + P +E + I
Sbjct: 486 VLLRTFEMIFRLVKQIPGAVIVTGCPPWWEILFLYFIEISFFFLWYYRQKGFSVIFCLFL 545
Query: 209 III 211
I
Sbjct: 546 IAG 548
>gi|37525573|ref|NP_928917.1| hypothetical protein plu1629 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785001|emb|CAE13922.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 775
Score = 41.3 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 77/198 (38%), Gaps = 17/198 (8%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVMAWGLDIIIHIAHR 162
FH + L AN A+PI+SF+ +P ++A++ S + + ++ + + + + I
Sbjct: 404 FHGVNFAALFANFWAVPIISFITVPLIMLALISNFCSFIHALLWQLVDYSVTLSL-IPLP 462
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL-----FTFPY 217
+ P +F+ V + + + + +I +G+ + L + + +
Sbjct: 463 VLQQSWSETGRFPPLITFIGWFVVIIWRFAWWQSYKLLITIFLGVMLCYLRRNEDYLWRF 522
Query: 218 SFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEK 277
S ++ L +++K+ + ++W++ + P+++ L +
Sbjct: 523 S-----MLDVGHGLAVIIEKDGKALIFD-----TANRWETGSMAERVIIPYLRWHRLTPE 572
Query: 278 NQSSLKEILRSMQPRKFL 295
+ L FL
Sbjct: 573 QIIISHDHLDHTGGLAFL 590
>gi|307565363|ref|ZP_07627856.1| ComEC/Rec2-like protein [Prevotella amnii CRIS 21A-A]
gi|307346032|gb|EFN91376.1| ComEC/Rec2-like protein [Prevotella amnii CRIS 21A-A]
Length = 523
Score = 41.3 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 62/160 (38%), Gaps = 9/160 (5%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD +F + I +I +Y P++ +K + I Q F + A IG
Sbjct: 360 LFDVSFQLSFAAIVSILLYY--PQINKLLNKGFLCKYKIFTRIFQMFTITLSAQIG---- 413
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + ++ +P Y +++ +AIP + ++ + + + L + V+
Sbjct: 414 --TAPLIAFYYSKLPTYFFLSSFIAIPCTTIILYAGVFFFVFIWLTPLQWLLGQVLYLTT 471
Query: 154 DIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVF 192
+ + H +S +G I V + ++++
Sbjct: 472 TFLNNSLHWLSSLPMASIFVGNITAYQVVLVYFMLIILLL 511
>gi|83816444|ref|YP_444172.1| DNA internalization-related competence protein ComEC/Rec2
[Salinibacter ruber DSM 13855]
gi|83757838|gb|ABC45951.1| DNA internalization-related competence protein ComEC/Rec2
[Salinibacter ruber DSM 13855]
Length = 814
Score = 41.3 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 27/235 (11%), Positives = 65/235 (27%), Gaps = 26/235 (11%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
+ G+ + PP F F + ++ ++ F + Y +
Sbjct: 354 SAHSLNTLGVAALGLLAVRPPM--LFDVGFQLSMAAVSGIVTLNPRFLEMVPDRYRTSEA 411
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W ++ + L + L+ HF + V GL+ N++ IP
Sbjct: 412 LDWVLSTGTTSAAAILG-------------TAPVLLYHFGWVSVAGLLLNMVGIPCTGLA 458
Query: 126 VIPAGLIAIL--LMILSLDNIPFGVMAWGLDIIIHIAHRISVA--HNEFCIGRIPETSFV 181
+ A + L + + L ++ + + +
Sbjct: 459 LTSAIATVAVGGLWPTAAASFG-SAADVFLQGLLATSRYGAAWFSWAGIRMATPDLWELT 517
Query: 182 TIVVEFLLMVFC---KTNIRHI---GSIMIGITIIILFTFPYSFSPDLLISEKGN 230
+ + + + R I G M + + + D++ + G
Sbjct: 518 ALGAGLIAVAQWPRPRLRWRWIVIGGLFMTASVWGPVVGGGTAPTLDIVFFDVGQ 572
>gi|89097413|ref|ZP_01170302.1| hypothetical protein B14911_27480 [Bacillus sp. NRRL B-14911]
gi|89087709|gb|EAR66821.1| hypothetical protein B14911_27480 [Bacillus sp. NRRL B-14911]
Length = 573
Score = 41.3 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 66/185 (35%), Gaps = 28/185 (15%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSE-------------SHNTWTWKKISSIKQSFLNEI 84
+ ++YK + G Y + + S W + ++ LN++
Sbjct: 60 SNHAWYKVLRESGQTYGTAEAVIPQVINGLPRNAFGTELSGIVWLFSIFPTMTAYALNQL 119
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLI--ANILAIPILSFVVIPAGLIAILLMILSLD 142
+ + L HF P + I LA + F P+G+++ L M L+L
Sbjct: 120 LTRCAAFMGMY--LLLKTHFIRSPEWSAIRVGAALAFALTPFW--PSGMLSTLGMPLAL- 174
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV-FCK---TNIR 198
+ D ++A + ++ F +G F + L +V + TN+R
Sbjct: 175 WAFLNIRKGKSDWKSYLALTLLPFYSSFVLGFF----FFLAAMGGLWLVDLFRGKGTNLR 230
Query: 199 HIGSI 203
+ +I
Sbjct: 231 FLAAI 235
>gi|312886218|ref|ZP_07745833.1| ComEC/Rec2-related protein [Mucilaginibacter paludis DSM 18603]
gi|311301325|gb|EFQ78379.1| ComEC/Rec2-related protein [Mucilaginibacter paludis DSM 18603]
Length = 703
Score = 41.3 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 49/147 (33%), Gaps = 14/147 (9%)
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
+ ++ I +FH PVY L +NI I I S +V+ AG++ + L + +
Sbjct: 398 LVCSVSLSAQIILLPIGILYFHDFPVYFLASNIFII-IPSAIVMYAGILYLALPPIPWLS 456
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF---------VTIVVEFLLMVFC- 193
W LD I I + I + I F +
Sbjct: 457 YGL---GWLLDKTISIMTKTLALMEHAPFATINKLWLSPAEFILCYALIAGIFCFLTLRN 513
Query: 194 KTNIRHIGSIMIGITIIILFTFPYSFS 220
K ++ I + ++I I S
Sbjct: 514 KQWLKFSLVIGLALSISISLKTFRSSR 540
>gi|260171879|ref|ZP_05758291.1| competence protein [Bacteroides sp. D2]
Length = 649
Score = 41.3 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
++ + ++ +F PV+ L+ N++ IP ++ ++ A +I +LL L +
Sbjct: 346 LISVSVAAQIGTAPLVMFYFSRFPVHFLLTNLVVIPFITIILY-AAVIMLLLTP--LSWL 402
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
V G+ ++ + + I
Sbjct: 403 QIVVAE-GVKKLLEGLNFFVRWVEQLPYASIDGIWL 437
>gi|313894554|ref|ZP_07828118.1| ComEC/Rec2-like protein [Veillonella sp. oral taxon 158 str. F0412]
gi|313440950|gb|EFR59378.1| ComEC/Rec2-like protein [Veillonella sp. oral taxon 158 str. F0412]
Length = 744
Score = 41.3 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 73/180 (40%), Gaps = 17/180 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD +F + G Y + W + IK + + A +
Sbjct: 414 LFDVSFQLSF------GATYGLLIWGKVLYERIQWLPRW---IKTPLVLCVSAQLLIM-- 462
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +FH I + L+A + P+L ++ + ++ +L + + + ++ L
Sbjct: 463 ----PLQLYYFHYISIASLLAACIVAPLLDISIVLIFVSTLVSYVLPIS-LMWSLVDVLL 517
Query: 154 DIIIHIAHRISVAHNEFCIGRI-PETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
I +++ H + + + +G I P +++ V+ L F R+ I+I ++++IL
Sbjct: 518 RISLYLNHVLGRSGSLLWLGMIHPYCAYIYYVLLGLFTYFLTHRKRYTVHIVISLSLLIL 577
>gi|114047985|ref|YP_738535.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella sp. MR-7]
gi|113889427|gb|ABI43478.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella sp. MR-7]
Length = 773
Score = 41.3 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 62/167 (37%), Gaps = 17/167 (10%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + ++ I Y + S E+ T+ + + I+ + I+ + +I
Sbjct: 325 FWLSFCALAIILYTLESAPVAQSIENKATFMVR--ARIRFAQFWSIQWRLSLVLGLVQAI 382
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F F + V+ L N+L +P S +VIP ++A+++ + +
Sbjct: 383 F----FGGLSVHSLWMNMLVVPWFSLIVIPLSMLALII------WWIGTLFGKSWFGFFN 432
Query: 159 IAHRISVAHNEF--CIGRIPETSFVT---IVVEFLLMVFCKTNIRHI 200
+A + + + G +P + ++ L + R++
Sbjct: 433 LADLTLLPYGKLLELSGDLPAHWYAVSETLLAGSLCALLSMILWRYL 479
>gi|146282978|ref|YP_001173131.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas stutzeri A1501]
gi|145571183|gb|ABP80289.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas stutzeri A1501]
Length = 741
Score = 41.3 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISV 165
+ G +AN+LA+P +S V P L+ LL+ + + V+ + L ++ + I+
Sbjct: 379 VSASGPLANLLAVPWVSLTV-PFALLGTLLLPVAGVGEALLSVVGYSLALLFDVLAAIAN 437
Query: 166 AHNEFCIGRIPETS 179
+ +P +
Sbjct: 438 WQPAWIAVGLPVWA 451
Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 63/194 (32%), Gaps = 11/194 (5%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
A ARL P G P FD+ + I A G + + +S + + W
Sbjct: 122 LQAGERWRLAARLKRPHGMVNPHAFDYEAWLLARRIGATG-TIKAGERLTASTASDGWRD 180
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
+ + + ++ + I S + + G + +++ I ++
Sbjct: 181 QLRARLMAVPASDRQGAIAALVVGDDSGLSRGDWQVLQDTGTV-HLMVISGQHIGMLAGL 239
Query: 131 LIAILLMILSLDNIP--FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL 188
L ++ +++ L P + W + + A R + + + V +
Sbjct: 240 LYGLVALLVRLGAWPRRLPWLPWACGLALSGALAYGWLAGFEVPVR---RACLMVTVVLV 296
Query: 189 LMVFCKTNIRHIGS 202
+ RH+G
Sbjct: 297 ----WRLRFRHLGV 306
>gi|288936289|ref|YP_003440348.1| DNA internalization-related competence protein ComEC/Rec2
[Klebsiella variicola At-22]
gi|288890998|gb|ADC59316.1| DNA internalization-related competence protein ComEC/Rec2
[Klebsiella variicola At-22]
Length = 754
Score = 41.3 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 46/123 (37%), Gaps = 14/123 (11%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
FH + + + AN+LA+P+++ + +P L A M+L L ++ ++ +A
Sbjct: 380 FHGVSLTSMAANLLAVPLVTLLAVPLILGA---MLLHLTGPGM------VESLLWLAADR 430
Query: 164 SVAHNEFCIGRIPETSF-----VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+A + + +P+ + ++ + ++L
Sbjct: 431 VLALLFWGLRHLPDGWLPLDARWLWISSLPWLLVMGWRFQSWRHFPALCLSVLLLLMRPF 490
Query: 219 FSP 221
+ P
Sbjct: 491 WRP 493
>gi|294141524|ref|YP_003557502.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella violacea DSS12]
gi|293327993|dbj|BAJ02724.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella violacea DSS12]
Length = 783
Score = 41.3 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 60/167 (35%), Gaps = 29/167 (17%)
Query: 107 IPVYGLIANILAIPILSFVVIP--------AGLIAILLM----ILSLDNIPFGVMAWGLD 154
I VYGL+ N++ +P S +VIP L + M I +L ++ M+ G
Sbjct: 404 ISVYGLLFNLVLVPWFSLIVIPVSFLCFSIWALGQVFSMDFPQIFALVDMSLVPMSIGFS 463
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT----NIRHIGSI---MIGI 207
+I + + + + L ++ R + I +G+
Sbjct: 464 MI-------ESLPGAWM--SVSGQTIACLSFSILGLILLCRVSHPRWRLVSLILFMPLGL 514
Query: 208 TIIILFTFPYSFSPDLLISEKGN-LVALVDKNTLISNYSNPPSFIFS 253
++ P L + + G L A+++K+ Y ++ +
Sbjct: 515 NVLFGLIAPRQSEWRLHLLDVGQGLSAVIEKSGKALIYDTGAAYGAN 561
>gi|163753197|ref|ZP_02160321.1| competence protein [Kordia algicida OT-1]
gi|161326929|gb|EDP98254.1| competence protein [Kordia algicida OT-1]
Length = 678
Score = 41.3 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 17/110 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTW--TWKKISSIKQSFLNEIRANIGTY 91
LFD F Y + AI + W W S + +SF + + +
Sbjct: 348 LFDVGFQLSYAAVFAIVWL------------QPLWKKLWNPTSFLPKSFWSLL--TVSFS 393
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL 141
+ +FH P +AN+ IP+L V++ G++ I+L L
Sbjct: 394 AQLGVLPLSLYYFHQFPGLFFVANLTIIPVLG-VILALGILVIVLAYFQL 442
>gi|315920191|ref|ZP_07916431.1| competence protein [Bacteroides sp. D2]
gi|313694066|gb|EFS30901.1| competence protein [Bacteroides sp. D2]
Length = 697
Score = 41.3 bits (95), Expect = 0.29, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
++ + ++ +F PV+ L+ N++ IP ++ ++ A +I +LL L +
Sbjct: 394 LISVSVAAQIGTAPLVMFYFSRFPVHFLLTNLVVIPFITIILY-AAVIMLLLTP--LSWL 450
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
V G+ ++ + + I
Sbjct: 451 QIVVAE-GVKKLLEGLNFFVRWVEQLPYASIDGIWL 485
>gi|269794647|ref|YP_003314102.1| ComEC/Rec2-like protein [Sanguibacter keddieii DSM 10542]
gi|269096832|gb|ACZ21268.1| ComEC/Rec2-related protein [Sanguibacter keddieii DSM 10542]
Length = 888
Score = 41.3 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 13/133 (9%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI-----PFGVMAWGLDIIIHIAH 161
+P Y + AN++A P ++PA ++ + + + V W I +A
Sbjct: 443 VPTYSVPANLIATPA----LVPATVLGVAGALAAPWWPQASSGLSQVAGWATWWIAEVAE 498
Query: 162 RISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR-HIGSIMIGITIIILFTFPYSFS 220
R + A + +L + + ++ G+ ++ L P S
Sbjct: 499 RFAAAPLARIPWVEGAPGVALLAAVTVLAIVVVGRWGSLVWAVRTGVYVVGLGAAPSSPR 558
Query: 221 P---DLLISEKGN 230
D+L+ G
Sbjct: 559 RSLWDVLLRRDGG 571
>gi|262278135|ref|ZP_06055920.1| competence factor involved in DNA uptake [Acinetobacter
calcoaceticus RUH2202]
gi|262258486|gb|EEY77219.1| competence factor involved in DNA uptake [Acinetobacter
calcoaceticus RUH2202]
Length = 810
Score = 41.3 bits (95), Expect = 0.30, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 51/134 (38%), Gaps = 3/134 (2%)
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
L++ + ++ F I + NI+A+P+L +++P + A + ++
Sbjct: 408 LLSKTLIESQGKIFIALCPLMLIFFQQISWVAPLTNIIAVPLLGGIIVPLNIFAACVWLI 467
Query: 140 --SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI 197
S+ N+ F + L I++ + + + + + +++ + +
Sbjct: 468 FNSIGNVFFQINDILLSIVLTCFSFLEKLSLPLQGFSLTPLALLGLSCAIIILFLPRGVL 527
Query: 198 -RHIGSIMIGITII 210
+ G I II
Sbjct: 528 PKSWGLICCLPLII 541
>gi|319943861|ref|ZP_08018142.1| DNA internalization-related competence protein ComEC/Rec2
[Lautropia mirabilis ATCC 51599]
gi|319743094|gb|EFV95500.1| DNA internalization-related competence protein ComEC/Rec2
[Lautropia mirabilis ATCC 51599]
Length = 858
Score = 40.9 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 59/171 (34%), Gaps = 9/171 (5%)
Query: 57 KMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANI 116
+ + + ++++ N+ A + + I F + G +AN+
Sbjct: 423 ALSGTRWWQQGRVGQWWAALRDGARNQWAATVLL------TPLTIAFFSTWSLIGPVANV 476
Query: 117 LAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI-SVAHNEFCIGRI 175
LAIP + V+ P + +LL + + ++ L + + + S+ ++
Sbjct: 477 LAIPWVGLVLTPMAIGVMLLAPV-FPWLAGWLLKALLLQLGWLMAFLRSLDALPLASIQL 535
Query: 176 PETSFVTIVVEFLLMVFCKTNIRHIGS-IMIGITIIILFTFPYSFSPDLLI 225
P + L V + + + + +L P PD L+
Sbjct: 536 PRPGVFALGCALLGAVLMLAPVGLRRPRLGVLCLLPLLLASPRHAPPDALV 586
>gi|329737151|gb|EGG73405.1| DNA internalization competence protein ComEC/Rec2-like protein
[Staphylococcus epidermidis VCU028]
Length = 738
Score = 40.9 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
I + + HF+ GL++N + +P SF++ P+ +I +L+
Sbjct: 330 ISFLAQLGSIVINTYHFNQFQWIGLLSNFIFVPFYSFILFPSVIIYFILIHF 381
>gi|329725458|gb|EGG61941.1| putative DNA internalization competence protein ComEC/Rec2-like
protein [Staphylococcus epidermidis VCU144]
gi|329735398|gb|EGG71690.1| putative DNA internalization competence protein ComEC/Rec2-like
protein [Staphylococcus epidermidis VCU045]
Length = 602
Score = 40.9 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
I + + HF+ GL++N + +P SF++ P+ +I +L+
Sbjct: 194 ISFLAQLGSIVINTYHFNQFQWIGLLSNFIFVPFYSFILFPSVIIYFILIHF 245
>gi|293366452|ref|ZP_06613129.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|291319221|gb|EFE59590.1| conserved hypothetical protein [Staphylococcus epidermidis
M23864:W2(grey)]
Length = 738
Score = 40.9 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
I + + HF+ GL++N + +P SF++ P+ +I +L+
Sbjct: 330 ISFLAQLGSIVINTYHFNQFQWIGLLSNFIFVPFYSFILFPSVIIYFILIHF 381
>gi|251811004|ref|ZP_04825477.1| competence protein ComEC [Staphylococcus epidermidis BCM-HMP0060]
gi|282875984|ref|ZP_06284851.1| ComEC/Rec2-like protein [Staphylococcus epidermidis SK135]
gi|251805514|gb|EES58171.1| competence protein ComEC [Staphylococcus epidermidis BCM-HMP0060]
gi|281295009|gb|EFA87536.1| ComEC/Rec2-like protein [Staphylococcus epidermidis SK135]
Length = 738
Score = 40.9 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
I + + HF+ GL++N + +P SF++ P+ +I +L+
Sbjct: 330 ISFLAQLGSIVINTYHFNQFQWIGLLSNFIFVPFYSFILFPSVIIYFILIHF 381
>gi|57867050|ref|YP_188731.1| competence protein ComEC/Rec2 [Staphylococcus epidermidis RP62A]
gi|57637708|gb|AAW54496.1| competence protein ComEC/Rec2, putative [Staphylococcus epidermidis
RP62A]
Length = 738
Score = 40.9 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
I + + HF+ GL++N + +P SF++ P+ +I +L+
Sbjct: 330 ISFLAQLGSIVINTYHFNQFQWIGLLSNFIFVPFYSFILFPSVIIYFILIHF 381
>gi|27468192|ref|NP_764829.1| ComEC late competence protein 3 [Staphylococcus epidermidis ATCC
12228]
gi|27315738|gb|AAO04873.1|AE016748_107 ComEC late competence protein 3 [Staphylococcus epidermidis ATCC
12228]
Length = 738
Score = 40.9 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
I + + HF+ GL++N + +P SF++ P+ +I +L+
Sbjct: 330 ISFLAQLGSIVINTYHFNQFQWIGLLSNFIFVPFYSFILFPSVIIYFILIHF 381
>gi|294788984|ref|ZP_06754224.1| DNA internalization-related competence protein ComEC/Rec2
[Simonsiella muelleri ATCC 29453]
gi|294483086|gb|EFG30773.1| DNA internalization-related competence protein ComEC/Rec2
[Simonsiella muelleri ATCC 29453]
Length = 739
Score = 40.9 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 51/127 (40%), Gaps = 7/127 (5%)
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL-DNIPFGVM 149
+ + I F +PV+ + N LAIP S+++ P L+A L I +
Sbjct: 366 AATLIGGVATIFLFGLLPVFSPLVNALAIPFFSWILTPLALLASFL-PFDFPKIIAAWLG 424
Query: 150 AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITI 209
++I+I++ + + E P T F +V L+++ +R + +
Sbjct: 425 EHTINILINLGNSL----PETAFTHTPATLFGLAIVAALIILLPNG-LRLKPLAWVLLGA 479
Query: 210 IILFTFP 216
L+ P
Sbjct: 480 FALYQPP 486
>gi|291519639|emb|CBK74860.1| ComEC/Rec2-related protein [Butyrivibrio fibrisolvens 16/4]
Length = 659
Score = 40.9 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 23/131 (17%)
Query: 30 AFPGLFDFNFSSYYKGISAIGYFYSIP-------------KMIYSSESHNTWTWKKISSI 76
G F F+FS+ GI YF +P K S E I
Sbjct: 174 IRNGSFIFSFSAVI-GI----YFIVLPLNTAYTNHCKIIKKANKSHEHFIEEKAPLGRRI 228
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV---IPAGLIA 133
Q + + ++G Y + + + H P+Y L+ NI+ +P++ V+ + AG++
Sbjct: 229 IQYIIRSLIFSLGMYAAMLPIVTQLYH--QTPLYSLLLNIIVLPLMPVVIGVGLVAGVMG 286
Query: 134 ILLMILSLDNI 144
+ M ++ + +
Sbjct: 287 LFFMPIAEELL 297
>gi|29349355|ref|NP_812858.1| competence protein [Bacteroides thetaiotaomicron VPI-5482]
gi|29341263|gb|AAO79052.1| competence protein [Bacteroides thetaiotaomicron VPI-5482]
Length = 700
Score = 40.9 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 36/94 (38%), Gaps = 4/94 (4%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
++ + ++ +F + L+ N++ IP+++ + A ++ +LL L
Sbjct: 399 SVSIAAQIGTAPLVMLYFSRFSTHFLLTNLVVIPLVTVTLY-AAVLMLLLTPL---PAVQ 454
Query: 147 GVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
VMA + ++ + + + +
Sbjct: 455 FVMAGAVRFLLKVLNDFVRWVEQLPYASLDGIWL 488
>gi|19553546|ref|NP_601548.1| competence protein ComE-like protein [Corynebacterium glutamicum
ATCC 13032]
gi|62391190|ref|YP_226592.1| multitransmembrane, metal-binding protein [Corynebacterium
glutamicum ATCC 13032]
gi|41326530|emb|CAF21012.1| Predicted multitransmembrane, metal-binding protein
[Corynebacterium glutamicum ATCC 13032]
Length = 554
Score = 40.9 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 31/213 (14%), Positives = 73/213 (34%), Gaps = 32/213 (15%)
Query: 55 IPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA 114
+ ++Y + WK + ++F I A++ T + I + ++A
Sbjct: 319 LQPLLYRAIGPPLAVWKVPDIVVRAFAVSIAADLVTIPIIALMA------RQISLVAVLA 372
Query: 115 NIL---AIPILSFVVIPAGLIAIL--LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
N+L A+P ++ + GLIA+L L+ ++ ++ I H+A N
Sbjct: 373 NVLVELAVPPITLL----GLIAVLASLLPWPVEYPLLKIIEPFTWWIHHVAKWCQQLPNS 428
Query: 170 FCIGRIPETSFVTIVVEFLLMV--FCKTNIRHIGSIMIGITIIILFTFPYSFSPD----- 222
+ + +V K +R + + + + D
Sbjct: 429 TLEISAGWAGIAWACMAAVWVVVIIYKGYVRTLAVCCVCFFLFGAWNNRLPAQIDPTELR 488
Query: 223 -LLISEK---------GNLVALVDKNTLISNYS 245
++I++ L+ + D + +S+
Sbjct: 489 FVIIADDSELTDVPEHAELIIVEDPHGSMSDRP 521
>gi|148825659|ref|YP_001290412.1| DNA mismatch repair protein [Haemophilus influenzae PittEE]
gi|148715819|gb|ABQ98029.1| DNA mismatch repair protein [Haemophilus influenzae PittEE]
Length = 719
Score = 40.9 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 49/128 (38%), Gaps = 9/128 (7%)
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
W + S + L+ ++ + + F+ + + G +AN++A+PI SF+++
Sbjct: 286 WKNRPFSPKVRWILSLF--HLQFGLLLFFTPLQLFLFNGLSLSGFLANLMAVPIYSFLLV 343
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT-IVVE 186
P L A+ +A G +I SV + F+T +
Sbjct: 344 PLILFAVFTNGTMFFWQLANKLAEGSTGLI------SVFQGNWLTVSFNLALFLTALCAG 397
Query: 187 FLLMVFCK 194
+++ +
Sbjct: 398 IFMLIIWR 405
>gi|327481329|gb|AEA84639.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas stutzeri DSM 4166]
Length = 741
Score = 40.9 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISV 165
I G +AN+LA+P +S V P L+ LL+ + + V+ + L ++ + I+
Sbjct: 379 ISASGPLANLLAVPWVSLTV-PFALLGTLLLPVAGVGEALLSVVGYSLALLFDVLAAIAN 437
Query: 166 AHNEFCIGRIPETS 179
+ +P +
Sbjct: 438 WQPAWIAVGLPVWA 451
>gi|237755649|ref|ZP_04584261.1| ComEC/Rec2-related protein [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237692186|gb|EEP61182.1| ComEC/Rec2-related protein [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 573
Score = 40.9 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 35/106 (33%), Gaps = 6/106 (5%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF- 146
+ + ++ +F I A PI S + P I++L ++ +
Sbjct: 335 SSLFATLFTLPVILYYFGNFSP----TTIFATPIASLPLYPLLTISVLNLLTGFEISFLV 390
Query: 147 GVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
+M + I I I S F G P + I + L +
Sbjct: 391 KIMDFFTLIFIQIVKFFSSLGLYFT-GFSPSIWLIFIYLATLTFIL 435
>gi|269215625|ref|ZP_06159479.1| DNA internalization-related competence protein ComEC/Rec2 [Slackia
exigua ATCC 700122]
gi|269131112|gb|EEZ62187.1| DNA internalization-related competence protein ComEC/Rec2 [Slackia
exigua ATCC 700122]
Length = 755
Score = 40.9 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 22/166 (13%), Positives = 55/166 (33%), Gaps = 9/166 (5%)
Query: 58 MIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANIL 117
M +S +T + + AN+ + ++ FH +P+ ++N++
Sbjct: 335 MPLASSWIDTALRGRFKGASDAIALTACANVLAMPANASL------FHRVPLISPLSNVV 388
Query: 118 AIPILSFVVIPA-GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP 176
A P+ +F+V+ +A+ + L ++ +++ ++ + +S +P
Sbjct: 389 AAPVFAFLVVGGMASLAVDAVFPRLGHMMLHALSYAAELFVSGMRALSHLPYASVFCSVP 448
Query: 177 ETSFVTIVVEFL--LMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ L R I GI +
Sbjct: 449 LGVSAAASIGAFCALWALWPLPTRRNACICGGIALACCLLVLAPGR 494
>gi|223939483|ref|ZP_03631360.1| ComEC/Rec2-related protein [bacterium Ellin514]
gi|223891868|gb|EEF58352.1| ComEC/Rec2-related protein [bacterium Ellin514]
Length = 810
Score = 40.9 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 49/167 (29%), Gaps = 13/167 (7%)
Query: 63 ESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPIL 122
W + F + I A +G+ +FH I AN+ A+ +
Sbjct: 390 PKWQRWLKIPARYLLDLFFSSIAAWLGSI------PLAAYYFHIITPASGPANVPAVFLC 443
Query: 123 SFVVIPAGLIAILLMILSLDNIPFGVMAWGL-DIIIHIAHRISVAHNEFCIGRIPETSFV 181
V+I +L F W L I + + + + P F
Sbjct: 444 GLVLIANLCSLLLAAWFPWAAELFNHAGWFLMRGIENSSQWSASWPAAYYYVPSPSL-FS 502
Query: 182 TIVVEFLLMVFCKTNI-----RHIGSIMIGITIIILFTFPYSFSPDL 223
IV LL+ I R+ + +I+ + P +
Sbjct: 503 IIVYYVLLLAIFTGWIFRKEQRNWRITGVAFLVIVWCSVYALQHPSI 549
>gi|282859477|ref|ZP_06268582.1| ComEC/Rec2-like protein [Prevotella bivia JCVIHMP010]
gi|282587705|gb|EFB92905.1| ComEC/Rec2-like protein [Prevotella bivia JCVIHMP010]
Length = 523
Score = 40.9 bits (94), Expect = 0.35, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 52/151 (34%), Gaps = 9/151 (5%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD +F + +++I FY P S K + Q + A IG
Sbjct: 360 LFDVSFQLSFSAVASILLFY--PIFNAWFCSDFFIKHKWLLWFPQMVAMTLSAQIG---- 413
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ + +F Y L+++ +AIP + ++ + L + V+++
Sbjct: 414 --TAPLVAFYFSKFSTYFLLSSFVAIPCTTIILYAGVTFFAFVWFAPLQWLAIEVLSFTT 471
Query: 154 DIIIHIAHRISVAH-NEFCIGRIPETSFVTI 183
+ H ++ I + + I
Sbjct: 472 IFLNTSLHWLATLPKASISIHHLTVLQVILI 502
>gi|330835528|ref|YP_004410256.1| major facilitator transporter [Metallosphaera cuprina Ar-4]
gi|329567667|gb|AEB95772.1| major facilitator transporter [Metallosphaera cuprina Ar-4]
Length = 377
Score = 40.9 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 148 VMAWGLDIII-----HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
++ G++ + +I+ +S + +G + + F+T ++ + V N R +
Sbjct: 100 IIGLGIEGELSVVPAYISETVSANNRGKSVGLVTASGFLTTLIVGPIAVLLNGNWRFLFL 159
Query: 203 IMIGITIIILFTFPYSFSPDLLISEKGNL 231
+ ++++ LFT + IS++G L
Sbjct: 160 AGLLVSLVALFTRLSLPESPMWISKRGKL 188
>gi|300869482|ref|ZP_07114065.1| ComEC/Rec2-related protein [Oscillatoria sp. PCC 6506]
gi|300332539|emb|CBN59263.1| ComEC/Rec2-related protein [Oscillatoria sp. PCC 6506]
Length = 821
Score = 40.9 bits (94), Expect = 0.36, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 51/142 (35%), Gaps = 10/142 (7%)
Query: 52 FYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG 111
F + ++ ++ + W +I I +I + F+ + Y
Sbjct: 380 FLATLGLLVTAPAIMKWLDWLPPAIASIIAVPIACSIWVL------PLQLYIFNVVSPYS 433
Query: 112 LIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG-VMAWGLDIIIHIAHRISVAHN-E 169
++ NI+A P+L V I + A+ +I ++ + +I +A S
Sbjct: 434 ILVNIIAAPLLWIVSIGGMISALAALIWPPAGSALASLLHYPAKGLIEVAQYFSQLPGNS 493
Query: 170 FCIGRIPETSFVTI--VVEFLL 189
+G + E + + ++ +
Sbjct: 494 VAVGTLSELQLIALYGIIGLVW 515
>gi|260772491|ref|ZP_05881407.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio metschnikovii CIP 69.14]
gi|260611630|gb|EEX36833.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio metschnikovii CIP 69.14]
Length = 747
Score = 40.9 bits (94), Expect = 0.37, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 56/166 (33%), Gaps = 22/166 (13%)
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ F + +Y + N++ IP SFVV+P I + +L D + +
Sbjct: 368 MLMAPVTAYFFSGVSLYSALYNLVFIPWFSFVVVPLLFIVLCGNVLMADQVQW------- 420
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVT-----IVVEFLLMVFCKTNIRHIGSIMIGIT 208
+ ++ + +G + + L +V ++ +I I
Sbjct: 421 ---LWTWVEAALMPFSWSLGFAEHSWLPVNQTWQYSLLALFLVMMLRSL-LTARSLIAIG 476
Query: 209 IIILFTFPYSFS-----PDLLISEKGNLVALVDKNTLISNYSNPPS 249
++ T+ D+L G L ++++N Y S
Sbjct: 477 LLFSATWLTIQPKAYWQVDMLDVGHG-LAMIIERNGRYVLYDTGSS 521
>gi|327398421|ref|YP_004339290.1| ComEC/Rec2-like protein [Hippea maritima DSM 10411]
gi|327181050|gb|AEA33231.1| ComEC/Rec2-related protein [Hippea maritima DSM 10411]
Length = 476
Score = 40.9 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+F ++NI+ IP+ FVV+P I L L + ++ II
Sbjct: 359 PITDFYFGRFTPLSFLSNIIFIPLFGFVVVPLAFIGSLASFLPYSVFKVWLFDV-INWII 417
>gi|304409785|ref|ZP_07391405.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella baltica OS183]
gi|307304142|ref|ZP_07583895.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella baltica BA175]
gi|304352303|gb|EFM16701.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella baltica OS183]
gi|306913040|gb|EFN43463.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella baltica BA175]
Length = 716
Score = 40.9 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 39/233 (16%), Positives = 79/233 (33%), Gaps = 30/233 (12%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + + I + I ++ S + + + + +G +A
Sbjct: 258 FWLSFCALGIILFTLEIQPRAFTPGSTRSARLRTGMMQFWAIQWRLSLGLGLLQAAL--- 314
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI---------AILLMILSLDNIP-FGV 148
F + V+ L NILA+P SFVVIP + A+ L L ++ +
Sbjct: 315 -----FGGVSVHSLWMNILAVPWFSFVVIPLAMAGFVCWWLGTALGLSHFGLSSLGVLRL 369
Query: 149 MAWGLDI---IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK-----TNIRHI 200
W L ++ I+ ++S H + F +V L K + +
Sbjct: 370 SDWSLSPYAQLLDISQQLSA-HWLALSDSLLALGFCALVGGVLWRYVPKHKNYIAWLSLL 428
Query: 201 GSIMIGITIIILFTFP--YSFSPDLLISEKGN-LVALVDKNTLISNYSNPPSF 250
+ I + + + + + + + G L +++KN Y +F
Sbjct: 429 SLLFIPALLFCMTLWSPVQTHRWTMHLLDVGQGLTVVIEKNGRGFIYDTGAAF 481
>gi|258621374|ref|ZP_05716408.1| Rec2-related protein [Vibrio mimicus VM573]
gi|258586762|gb|EEW11477.1| Rec2-related protein [Vibrio mimicus VM573]
Length = 747
Score = 40.9 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 70/187 (37%), Gaps = 20/187 (10%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLD--NIPFGVMAW 151
+ F + + ++ N++ IP S V++PA + + L + +
Sbjct: 371 APVTAYFFGGLSITAVLYNLVFIPWFSVVIVPALFLGLALTVTIPTWAELYWPWVDWTFL 430
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
LD + A V + G ++ +++ + + + + ++I+
Sbjct: 431 PLDWALKFADVGWVVIPQSIQG---------LIAALVVLSLLY-RVMSLRACALSLSIVG 480
Query: 212 LFTFPYSFSP----DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
L+ + S +P D+L G L +++KN Y S+ + +I P +
Sbjct: 481 LWWWFPSITPFWRMDVLDVGHG-LAIVIEKNGHAIVYDTGSSWPGGSYAQNVIEPILQQR 539
Query: 268 HVQKEDL 274
+++ D
Sbjct: 540 GIRRLDG 546
>gi|254514452|ref|ZP_05126513.1| DNA internalization-related competence protein ComEC/Rec2 [gamma
proteobacterium NOR5-3]
gi|219676695|gb|EED33060.1| DNA internalization-related competence protein ComEC/Rec2 [gamma
proteobacterium NOR5-3]
Length = 732
Score = 40.9 bits (94), Expect = 0.38, Method: Composition-based stats.
Identities = 28/217 (12%), Positives = 66/217 (30%), Gaps = 16/217 (7%)
Query: 8 YDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNT 67
+ I ARL P G P D + I A G S + + +
Sbjct: 75 AELLRPGAEITFDARLRRPWGLVNPAAADGEKAFLVANIHATG-SVSKLLIPGAEQHSGL 133
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+K+ ++ + +I++ + T + + + I A + A + +VI
Sbjct: 134 RPSQKLDRMRDAISQQIQSKVPTDVGSLLAALAVGDRRAIAPES-WARLRAYGLTHLLVI 192
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV------ 181
I +L + ++ + ++ + F I +
Sbjct: 193 SGMHITLLALP---GWWCGAALSRVIRLVFRQRFPVRALPPIFAIVTAGGYGLLSGFAIP 249
Query: 182 -----TIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
++ F+L C ++R + + ++
Sbjct: 250 SQRAVIMLTLFILPGVCGRSLRSARVLPLAGVTLLAL 286
Score = 40.9 bits (94), Expect = 0.39, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 39/112 (34%), Gaps = 3/112 (2%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
+ + + F G I N+LAIP+++ V+P L +++ L
Sbjct: 324 GAQGFMLLAMLPLSLYWFGEASSIGGIINLLAIPLVTLAVVPLLLGSLVCAPLFAGVADL 383
Query: 147 GVMA-WGLDIIIH--IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ L ++ +A+ + + P + + V +L+
Sbjct: 384 QLQGAAALLSLLWSTLAYWEPFIASRTILQGGPGVPTLALAVTGILLTPLPG 435
>gi|21231567|ref|NP_637484.1| DNA uptake/competence protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66768313|ref|YP_243075.1| DNA uptake/competence protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|21113253|gb|AAM41408.1| DNA uptake/competence protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66573645|gb|AAY49055.1| DNA uptake/competence protein [Xanthomonas campestris pv.
campestris str. 8004]
Length = 796
Score = 40.6 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 61/172 (35%), Gaps = 10/172 (5%)
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI 132
S ++ + A IG + F + G +AN++AIP +FVV+P L+
Sbjct: 387 RSMLRGFLSAQAVATIGLLPLTVSL------FGQASLVGPLANLVAIPWWTFVVVPLALL 440
Query: 133 AILLMIL--SLDNIPFGVMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLL 189
L + + W ++ + + + + V +V
Sbjct: 441 GTALEAAWPGAGVWAWQLAGWCFELTWPAFVWLGRTQVALWWVPESDAIALVAALVGAFW 500
Query: 190 MVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
++ + T + + ++ + P + DL + + G +A++ +
Sbjct: 501 LLMPRGTPAKSVALLLWLPLLWPDRALPEAGEADLQVLDVGQGLAVLVRTQR 552
>gi|328907124|gb|EGG26890.1| putative ComE operon protein 3 [Propionibacterium sp. P08]
Length = 675
Score = 40.6 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 40/114 (35%), Gaps = 6/114 (5%)
Query: 111 GLIANILA---IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
GLIAN+ A +P+ S + + GL A++ L + + II IAH +
Sbjct: 407 GLIANLAAAPFVPLASALGMATGLFALIWPPLG--APFGRLAGCCVQPIIWIAH-VGAKA 463
Query: 168 NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ V ++ + + T + + + + T P
Sbjct: 464 PSGLLRWPAGGWAVGVLAGICVGLALVTPAVLTRPWLTALAGLAVLTATVVRPP 517
>gi|258626801|ref|ZP_05721608.1| Rec2-related protein [Vibrio mimicus VM603]
gi|258580848|gb|EEW05790.1| Rec2-related protein [Vibrio mimicus VM603]
Length = 747
Score = 40.6 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 70/187 (37%), Gaps = 20/187 (10%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLD--NIPFGVMAW 151
+ F + + ++ N++ IP S V++PA + + L + +
Sbjct: 371 APVTAYFFGGLSITAVLYNLVFIPWFSVVIVPALFLGLALTVTIPTWAELYWPWVDWTFL 430
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
LD + A V + G ++ +++ + + + + ++I+
Sbjct: 431 PLDWALKFADVGWVVIPQSIQG---------LIAALVVLSLLY-RVMSLRACALSLSIVG 480
Query: 212 LFTFPYSFSP----DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
L+ + S +P D+L G L +++KN Y S+ + +I P +
Sbjct: 481 LWWWFPSITPFWRMDVLDVGHG-LAIVIEKNGHAIVYDTGSSWPGGSYAKNVIEPILQQR 539
Query: 268 HVQKEDL 274
+++ D
Sbjct: 540 GIRRLDG 546
>gi|188991452|ref|YP_001903462.1| Competence-related DNA-transformation transporter, probable
[Xanthomonas campestris pv. campestris str. B100]
gi|167733212|emb|CAP51410.1| Competence-related DNA-transformation transporter, probable
[Xanthomonas campestris pv. campestris]
Length = 796
Score = 40.6 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 61/172 (35%), Gaps = 10/172 (5%)
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI 132
S ++ + A IG + F + G +AN++AIP +FVV+P L+
Sbjct: 387 RSMLRGFLSAQAVATIGLLPLTVSL------FGQASLVGPLANLVAIPWWTFVVVPLALL 440
Query: 133 AILLMIL--SLDNIPFGVMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLL 189
L + + W ++ + + + + V +V
Sbjct: 441 GTALEAAWPGAGVWAWQLAGWCFELTWPAFVWLGRTQVALWWVPESDAIALVAALVGAFW 500
Query: 190 MVFCK-TNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL 240
++ + T + + ++ + P + DL + + G +A++ +
Sbjct: 501 LLMPRGTPAKSVALLLWLPLLWPDRALPEAGEADLQVLDVGQGLAVLVRTQR 552
>gi|206577881|ref|YP_002239438.1| DNA internalization-related competence protein ComEC/Rec2
[Klebsiella pneumoniae 342]
gi|206566939|gb|ACI08715.1| DNA internalization-related competence protein ComEC/Rec2
[Klebsiella pneumoniae 342]
Length = 754
Score = 40.6 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 46/123 (37%), Gaps = 14/123 (11%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
FH + + + AN+LA+P+++ + +P L A M+L L ++ ++ +A
Sbjct: 380 FHGVSLTSMAANLLAVPLVTLLAVPLILGA---MLLHLTGPGM------VESLLWLAADR 430
Query: 164 SVAHNEFCIGRIPETSF-----VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+A + + +P+ + ++ + ++L
Sbjct: 431 VLALLFWGLRHLPDGWLPLDARWLWISSLPWLLVMGWRFQSWRHFPALCLSVLLLLMRPF 490
Query: 219 FSP 221
+ P
Sbjct: 491 WRP 493
>gi|90415820|ref|ZP_01223753.1| DNA internalization-related competence protein [marine gamma
proteobacterium HTCC2207]
gi|90332194|gb|EAS47391.1| DNA internalization-related competence protein [marine gamma
proteobacterium HTCC2207]
Length = 614
Score = 40.6 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 21/149 (14%), Positives = 56/149 (37%), Gaps = 5/149 (3%)
Query: 106 CIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRI 163
+ + N++A+P +S V +P L+ LL+ + + + V W + ++ +
Sbjct: 343 RLSWLAPLVNLVAVPWVSLVTVPTVLLGCLLLPISTNTAETIWKVSDWSVQLLWQFLDLL 402
Query: 164 SVAHNEFCIGRIPETSFVT--IVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ + ++ M+ K R +G + + + +++ +
Sbjct: 403 PSNQGFLVSPAGTSSLILLTGLLAGLCFMLPWKFYERWLGILPLVLLLVLSEKPKFGLRV 462
Query: 222 DLLISEKGNLVALVDKNTLISNYSNPPSF 250
+L +G L +V+ + Y + F
Sbjct: 463 TVLDVGQG-LAVVVETDQRSLLYDSGAQF 490
>gi|238855241|ref|ZP_04645560.1| DNA internalization-related competence protein ComEC/Rec2
[Lactobacillus jensenii 269-3]
gi|282932466|ref|ZP_06337891.1| ComEC/Rec2-like protein [Lactobacillus jensenii 208-1]
gi|238832133|gb|EEQ24451.1| DNA internalization-related competence protein ComEC/Rec2
[Lactobacillus jensenii 269-3]
gi|281303415|gb|EFA95592.1| ComEC/Rec2-like protein [Lactobacillus jensenii 208-1]
Length = 743
Score = 40.6 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 47/122 (38%), Gaps = 5/122 (4%)
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM--ILSLDNIPFGVMAWGLDIIIHI 159
+F+ + ++ + NIL +P +FVV+P I I L L + +I ++ +G I
Sbjct: 363 FNFYQVNIFTVFFNILIVPYFNFVVMPLTFINIFLFNKFLFISDIFEKILEFGEATINSF 422
Query: 160 AHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
A G+I + +++ + + R + ++ + F
Sbjct: 423 ARTNI---GMIIFGKITWWQVLFLLIVSFCYLIFRLESRKLKLSIVTLISAYSLIFISIH 479
Query: 220 SP 221
P
Sbjct: 480 FP 481
>gi|225175097|ref|ZP_03729093.1| DNA internalization-related competence protein ComEC/Rec2
[Dethiobacter alkaliphilus AHT 1]
gi|225169273|gb|EEG78071.1| DNA internalization-related competence protein ComEC/Rec2
[Dethiobacter alkaliphilus AHT 1]
Length = 778
Score = 40.6 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 58/159 (36%), Gaps = 14/159 (8%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL--LMILSLDNI 144
+ + HF + + N+L +P++ +V+ GL IL L+ L L
Sbjct: 379 AVTVAAQLAVLPLQANHFGLFSLLAVPVNLLCVPLVG-LVMALGLAGILFGLVSLPLSAP 437
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI------- 197
L I+ + S+A F R+P V ++ L+V I
Sbjct: 438 FLFAALPALLILEGLPQ--SLASLPFAALRVPVVHPVIWLLYGTLLVMFVARISFRPVTG 495
Query: 198 -RHIGSIMIGITIIILFTFPYSFSP-DLLISEKGNLVAL 234
+ + ++ ++ + +P ++ + G +A+
Sbjct: 496 KKLLAVLVGLNILLFALLPVWGQAPLEVTFIDVGQGMAV 534
>gi|160940334|ref|ZP_02087679.1| hypothetical protein CLOBOL_05224 [Clostridium bolteae ATCC
BAA-613]
gi|158436914|gb|EDP14681.1| hypothetical protein CLOBOL_05224 [Clostridium bolteae ATCC
BAA-613]
Length = 850
Score = 40.6 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 55/176 (31%), Gaps = 29/176 (16%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F+ +F + G+ S ++ W+K I S +
Sbjct: 372 GFELSFGAVLAISGLGGWVQSFLEL--------ERAWEKTLLISLSVQIVL--------- 414
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG- 152
+ ++ H+ P+YG+ N+L IP++S + + +G++ I+L + + G
Sbjct: 415 ---TPIVLYHYFQHPLYGIFLNLLVIPLVSIL-MYSGILGIVLGSFWIQG-GVAAVGAGH 469
Query: 153 --LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE----FLLMVFCKTNIRHIGS 202
L + + P + + +V R
Sbjct: 470 YILRFYELLCKFAEGLPGYSLVLGRPSPGSLVMYFGIHGMGTAVVLFCIRGRSAFI 525
>gi|257414010|ref|ZP_04744971.2| DNA internalization-related competence protein ComEC/Rec2
[Roseburia intestinalis L1-82]
gi|257201506|gb|EEU99790.1| DNA internalization-related competence protein ComEC/Rec2
[Roseburia intestinalis L1-82]
Length = 813
Score = 40.6 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV- 126
W K + S Q + + G +F+ IPVY ++ N+L +P + V+
Sbjct: 357 WAGKIVQSAYQGYAVLQKIGTGFVLQLVILPVTAWYFYEIPVYAMLLNLLVLPFVGIVLA 416
Query: 127 --IPAGLIAILLMI 138
I GL+ +M
Sbjct: 417 SGIAGGLLGCAVMP 430
>gi|261418467|ref|YP_003252149.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. Y412MC61]
gi|319767572|ref|YP_004133073.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. Y412MC52]
gi|261374924|gb|ACX77667.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. Y412MC61]
gi|317112438|gb|ADU94930.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. Y412MC52]
Length = 749
Score = 40.6 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 13/99 (13%), Positives = 40/99 (40%), Gaps = 7/99 (7%)
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
HF+ + V+ + N+ +P SFV++P ++ + + + + +++ + H
Sbjct: 370 YHFYEVSVWSVGLNVFFVPWYSFVILPLAFLSAVF-PF---SPLIWLFSRLIELTDAVVH 425
Query: 162 RISVAHNEFCIGRIPETSFV---TIVVEFLLMVFCKTNI 197
SV ++ + P + + + + + +
Sbjct: 426 FFSVDYSFMLVLGRPGPWCLAGYLTAIAAAFLDWERGRL 464
>gi|116513861|ref|YP_812767.1| metallo-beta-lactamase superfamily hydrolase [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|116093176|gb|ABJ58329.1| Metallo-beta-lactamase superfamily hydrolase [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
Length = 728
Score = 40.6 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ FL+ F+ + V + NIL +P +++V+P +A+L L ++ ++
Sbjct: 344 TPFLLYFFYQVNVCTIFYNILVVPYFNYIVMPMTGLALLAPP-GLAAFFEKILEAAEGML 402
Query: 157 IHIAHR 162
++A
Sbjct: 403 ANVAKT 408
>gi|260664601|ref|ZP_05865453.1| competence protein [Lactobacillus jensenii SJ-7A-US]
gi|260561666|gb|EEX27638.1| competence protein [Lactobacillus jensenii SJ-7A-US]
Length = 668
Score = 40.6 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 48/122 (39%), Gaps = 5/122 (4%)
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM--ILSLDNIPFGVMAWGLDIIIHI 159
+F+ + ++ + NIL +P +FVV+P I I L L + +I ++ +G I
Sbjct: 288 FNFYQVNIFTVFFNILIVPYFNFVVMPLTFINIFLFNKFLFISDIFEKILEFGEATINSF 347
Query: 160 AHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
A G+I + +++ +F + R + ++ + F
Sbjct: 348 ARTNI---GMIIFGKITWWQVLFLLIVSFCYLFFRLESRKLKLSIVTLISAYSLIFISIH 404
Query: 220 SP 221
P
Sbjct: 405 FP 406
>gi|319786918|ref|YP_004146393.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudoxanthomonas suwonensis 11-1]
gi|317465430|gb|ADV27162.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudoxanthomonas suwonensis 11-1]
Length = 775
Score = 40.6 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 35/110 (31%), Gaps = 3/110 (2%)
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPF 146
+ F + G +AN+LAIP S VV+P L+ LL L +
Sbjct: 381 QGVATLGLLPLGAVLFQQASLAGPLANLLAIPWWSLVVVPLSLVGTLLEALHGGAGGWAW 440
Query: 147 GVMAWGLDIIIHI-AHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ A D + + + + + + ++ +
Sbjct: 441 RLAAACFDPSWRLFEGMAGSPFALWWLPEARGWAVLPALAGAFWLMLPRG 490
>gi|262404227|ref|ZP_06080782.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio sp. RC586]
gi|262349259|gb|EEY98397.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio sp. RC586]
Length = 747
Score = 40.6 bits (93), Expect = 0.44, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ F + + ++ N++ IP S V++PA + +++ L + + W +
Sbjct: 371 APVTAYFFGGLSITAVLYNLVFIPWFSLVIVPALFLGLVVT---LTAPSWAAVYWP--WV 425
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVT------IVVEFLLMVFCKTNIRHIGSIMIGITII 210
S ++ + V ++V F+++ + + + ++I+
Sbjct: 426 DW-----SFLPLDWALQFADMGWVVIPQNIQGLIVAFVVLSMLY-RVMSLRACTFSLSIV 479
Query: 211 ILFTFPYSFSP----DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEA 266
L+ + S +P D+L G L +++++ Y S+ + ++I P +
Sbjct: 480 GLWWWFPSTTPLWRMDVLDVGHG-LAIVIEQDDRAIVYDTGSSWPGGSYVQSVIEPILQQ 538
Query: 267 PHVQKEDL 274
+ + D
Sbjct: 539 RGIHRLDG 546
>gi|297529319|ref|YP_003670594.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. C56-T3]
gi|297252571|gb|ADI26017.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacillus sp. C56-T3]
Length = 749
Score = 40.6 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 13/99 (13%), Positives = 40/99 (40%), Gaps = 7/99 (7%)
Query: 102 KHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
HF+ + V+ + N+ +P SFV++P ++ + + + + +++ + H
Sbjct: 370 YHFYEVSVWSVGLNVFFVPWYSFVILPLAFLSAVF-PF---SPLIWLFSRLIELTDAVVH 425
Query: 162 RISVAHNEFCIGRIPETSFV---TIVVEFLLMVFCKTNI 197
SV ++ + P + + + + + +
Sbjct: 426 FFSVDYSFMLVLGRPGPWCLAGYLTAIAAAFLDWERGRL 464
>gi|325125518|gb|ADY84848.1| Competence protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
Length = 752
Score = 40.6 bits (93), Expect = 0.45, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ FL+ F+ + V + NIL +P +++V+P +A+L L ++ ++
Sbjct: 368 TPFLLYFFYQVNVCTIFYNILVVPYFNYIVMPMTGLALLAPP-GLAAFFEKILEAAEGML 426
Query: 157 IHIAHR 162
++A
Sbjct: 427 ANVAKT 432
>gi|262195133|ref|YP_003266342.1| DNA internalization-related competence protein ComEC/Rec2
[Haliangium ochraceum DSM 14365]
gi|262078480|gb|ACY14449.1| DNA internalization-related competence protein ComEC/Rec2
[Haliangium ochraceum DSM 14365]
Length = 880
Score = 40.6 bits (93), Expect = 0.46, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 52/146 (35%), Gaps = 4/146 (2%)
Query: 30 AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIG 89
F F +F++ A+G + +S + + A+
Sbjct: 373 VFDPAFQLSFAATATLALALGRRSDSDPADEPGPEVEIRRNRHLSRLWRWLGGLWSASAW 432
Query: 90 TYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFG 147
+ + L F + GL+AN++A+P++ V+P G++ +LL ++ L +
Sbjct: 433 AAAATAPIAALA--FGAVATGGLLANLVAVPLVELAVVPVGMLGLLLAAVNQPLGQLVLD 490
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIG 173
+ ++ +A +
Sbjct: 491 LAVGASGWVVRVAELAAAHAPVVHTP 516
>gi|239626087|ref|ZP_04669118.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520317|gb|EEQ60183.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 861
Score = 40.6 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 43/118 (36%), Gaps = 21/118 (17%)
Query: 31 FPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGT 90
F F +F + I +G + + + L + I
Sbjct: 358 FASGFQLSFGA-VSAIGGLG-------------GWLRSGFHMEKGWRNTILMSLCVQIVI 403
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV 148
+ ++ H++ P+YG+ N+L IP+++ + + +G++ I L L V
Sbjct: 404 ------TPVVLYHYYQHPLYGIFMNLLVIPLIAIL-MYSGILGIFLGSFWLKGGIIAV 454
>gi|169795042|ref|YP_001712835.1| competence factor involved in DNA uptake [Acinetobacter baumannii
AYE]
gi|215482592|ref|YP_002324784.1| DNA internalization-related competence protein ComEC/Rec2
[Acinetobacter baumannii AB307-0294]
gi|332851111|ref|ZP_08433220.1| DNA internalization competence protein ComEC/Rec2-like protein
[Acinetobacter baumannii 6013150]
gi|332869616|ref|ZP_08438827.1| DNA internalization competence protein ComEC/Rec2-like protein
[Acinetobacter baumannii 6013113]
gi|169147969|emb|CAM85832.1| Competence factor involved in DNA uptake [Acinetobacter baumannii
AYE]
gi|213988324|gb|ACJ58623.1| DNA internalization-related competence protein ComEC/Rec2
[Acinetobacter baumannii AB307-0294]
gi|332730275|gb|EGJ61600.1| DNA internalization competence protein ComEC/Rec2-like protein
[Acinetobacter baumannii 6013150]
gi|332732663|gb|EGJ63895.1| DNA internalization competence protein ComEC/Rec2-like protein
[Acinetobacter baumannii 6013113]
Length = 810
Score = 40.6 bits (93), Expect = 0.47, Method: Composition-based stats.
Identities = 30/227 (13%), Positives = 76/227 (33%), Gaps = 29/227 (12%)
Query: 9 DPFPAETTIEGIARLSPPSGP--AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
P T + A L P F ++ + + I +P+ + S S
Sbjct: 346 QPIKPFTLLVYSASLLLLMDPFSVLSAGFWLSYGACFILIRIYQTIAQLPEQHFLSLSSK 405
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
F++++ + S + F I + NI+A+PI+ V+
Sbjct: 406 MI-----------FMSKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPIVGSVI 454
Query: 127 IPAGLIAILL---------MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
+P ++A M+ +++ ++ L ++ ++ + +
Sbjct: 455 VPLNIMAACAWFVIKPFGNMLFHFNDMLLSILLSYLGLLEKLSLTLQGIS-------LTP 507
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLL 224
S + I +++ K + I+ + ++I+ ++L
Sbjct: 508 LSLLAISCAIIILFLPKGILPKTWGILCCLPLVIMNKTSQQIQLNIL 554
>gi|154502624|ref|ZP_02039684.1| hypothetical protein RUMGNA_00437 [Ruminococcus gnavus ATCC 29149]
gi|153796816|gb|EDN79236.1| hypothetical protein RUMGNA_00437 [Ruminococcus gnavus ATCC 29149]
Length = 529
Score = 40.6 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 62/183 (33%), Gaps = 25/183 (13%)
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
S I QSF + N+ + + + P Y L+ N++ IP++S VV+ AGL+
Sbjct: 114 SKILQSFQASLAVNLVLFPVMLSFYY------EFPPYSLLLNLVIIPLMS-VVLGAGLLG 166
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHR-----ISVAHNEFCIGRIPETSFVTIVVEFL 188
L + GV+ I+++ + + + G+ + V L
Sbjct: 167 SFLCLFF--KPAGGVVFLLCRGILNLYEWSCNLSMKLPFSRIVTGKPEVSWIVLYYAVLL 224
Query: 189 LMVF-CKTN----------IRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDK 237
L+ + + I + F +L +G+ + L
Sbjct: 225 LVCLYWMLRKEKTGKTCFAWGMLAAAGICLAASGQMKHHGVFQATMLDVGQGDGIFLRTP 284
Query: 238 NTL 240
N
Sbjct: 285 NGR 287
>gi|104773854|ref|YP_618834.1| competence protein ComEC [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103422935|emb|CAI97597.1| Competence protein ComEC [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
Length = 728
Score = 40.6 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ FL+ F+ + V + NIL +P +++V+P +A+L L ++ ++
Sbjct: 344 TPFLLYFFYQVNVCTIFYNILVVPYFNYIVMPMTGLALLAPP-GLAAFFEKILEAAEGML 402
Query: 157 IHIAHR 162
++A
Sbjct: 403 ANVAKT 408
>gi|319952474|ref|YP_004163741.1| comec/rec2-related protein [Cellulophaga algicola DSM 14237]
gi|319421134|gb|ADV48243.1| ComEC/Rec2-related protein [Cellulophaga algicola DSM 14237]
Length = 669
Score = 40.6 bits (93), Expect = 0.48, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 52/134 (38%), Gaps = 18/134 (13%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN-TWTWKKISSIKQSFLNEIRANIGTYG 92
LF F Y + AI + Y + + ++ + W+ +S +
Sbjct: 348 LFQVGFQMSYSAVFAIIWIYPKLQRFWYPKNKVIRYFWQLLS-------------VSIAA 394
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
+ +FH P IAN+L IP L ++ I I+++ILSL N+ + G
Sbjct: 395 QLGVLPISLFYFHQFPGLFFIANLLIIPFLGIIL----GIGIVVLILSLTNLLPSFITDG 450
Query: 153 LDIIIHIAHRISVA 166
+ II + I
Sbjct: 451 YNYIISTMNTIVKW 464
>gi|78485301|ref|YP_391226.1| DNA internalization-related competence protein ComEC/Rec2
[Thiomicrospira crunogena XCL-2]
gi|78363587|gb|ABB41552.1| DNA internalization-related competence protein ComEC/Rec2
[Thiomicrospira crunogena XCL-2]
Length = 841
Score = 40.6 bits (93), Expect = 0.49, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 68/170 (40%), Gaps = 21/170 (12%)
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
+ + IK + + I + L+ ++H I + ++N++A+P +S + +
Sbjct: 387 FAVLREPKIKMAPNWQKMIAIQLALTIGLVPLLVSYYHQIALASFLSNLIAVPFVSLIAL 446
Query: 128 PAGLIAILL---------MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
P I +LL +I+SL+N + + WGL+ + + + IG +
Sbjct: 447 PLLFITVLLSFVSTSLASVIMSLNNFLWQSLWWGLE-------TLESQFDYWVIGHVNGW 499
Query: 179 SFVTI-VVEFLLMVFCKTNIRH----IGSIMIGITIIILFTFPYSFSPDL 223
V + + ++F + + ++ ++ +I + P L
Sbjct: 500 QVVLLYGIPLAGVIFWRKKQQGIELQARFKLLLLSGVIFGLWAVMAVPTL 549
>gi|315650249|ref|ZP_07903322.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
gi|315487494|gb|EFU77803.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
Length = 746
Score = 40.6 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 15/104 (14%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + + + K S S I ++G
Sbjct: 330 GFQLSFGAVLSLGGVLAFVLKKLKKAKKSCSEK-------------IFEIILVSVGV--Q 374
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
++ +F+ PVY + NI+AIP++SFV+ A L +L M
Sbjct: 375 VLTLPLVLYYFYSFPVYAFLLNIVAIPLMSFVLYSAILSLVLNM 418
>gi|21242823|ref|NP_642405.1| competence protein [Xanthomonas axonopodis pv. citri str. 306]
gi|21108310|gb|AAM36941.1| competence protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 849
Score = 40.6 bits (93), Expect = 0.50, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 40/111 (36%), Gaps = 3/111 (2%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNI 144
+ T + + F + G AN++AIP +FVV+P L+ L +
Sbjct: 402 SAQTVATVGLLPLTVSLFGQASLVGPFANLVAIPWWTFVVVPLCLLGTALEAIYPGTGMW 461
Query: 145 PFGVMAWGLDIIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
+ + W ++ + A + + + + ++ ++ +
Sbjct: 462 AWQLAGWCFELTWPGFVWLGQTALALWWVPESDGVALIAALLGAFWLLLPR 512
>gi|257874947|ref|ZP_05654600.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
gi|257809113|gb|EEV37933.1| conserved hypothetical protein [Enterococcus casseliflavus EC20]
Length = 609
Score = 40.6 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 44/116 (37%), Gaps = 19/116 (16%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F+ + + N+L ++P +A + + +L + + L
Sbjct: 205 FNYFNIAIRMNNLLVD-----FILPVLTLAGIAGLFALKGNVLPSIGFFL---------- 249
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRH---IGSIMIGITIIILFTFP 216
+ + + F+ I+ +LL+ + ++R +G +++G+ I L P
Sbjct: 250 -LIGASLDLVKNSAVFFLLILGGYLLVCLWQASVRWRQRLGMMIVGLAAIGLSVLP 304
>gi|296219922|ref|XP_002756091.1| PREDICTED: serine/threonine-protein kinase TAO2 isoform 2
[Callithrix jacchus]
Length = 1121
Score = 40.6 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 25/68 (36%), Gaps = 1/68 (1%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L +V + R + + +G+ L +P P + ++ G V
Sbjct: 897 HLPPSLFLLLAQGTALGVVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAVAAGGRWV 956
Query: 233 ALVDKNTL 240
Sbjct: 957 RQQGPRVR 964
>gi|92113709|ref|YP_573637.1| DNA internalization-related competence protein ComEC/Rec2
[Chromohalobacter salexigens DSM 3043]
gi|91796799|gb|ABE58938.1| DNA internalization-related competence protein ComEC/Rec2
[Chromohalobacter salexigens DSM 3043]
Length = 758
Score = 40.6 bits (93), Expect = 0.51, Method: Composition-based stats.
Identities = 30/252 (11%), Positives = 80/252 (31%), Gaps = 14/252 (5%)
Query: 9 DPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN-- 66
+P T+ + L SG PG + + + ++ P + S +
Sbjct: 288 EPPALRATVMALLGLWVASGRHAPGPWQAWWLALLVVVTGDPLTVWQPGLWLSFLAVGVL 347
Query: 67 --TWTWKKIS-SIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
W + + + L +R+ +A++ + F + + N++A+P++
Sbjct: 348 IAAWQGRPVPRGARGWLLALVRSQCLLAPFMAAAVLVG--FERLSPAAPLINLVAVPLVG 405
Query: 124 FVVIPAGLIA-ILLMILSLDNIPFGVMAWGLDII----IHIAHRISVAHNEFCIGRIPET 178
+++P GL L L +P+ ++ + +
Sbjct: 406 SLMVPLGLAGWALAWSPGLAMLPWRAFDALAQLVWQGLAWMGEIVPSWLPPGEEILPLAL 465
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISE--KGNLVALVD 236
+L+ ++ +I + + + +++ + +G LV L
Sbjct: 466 LLAAWGGAWLMPGLARSVRVWASLSLIALALTWQPSTIPPGRVVVIVHDVGQGQLVELRS 525
Query: 237 KNTLISNYSNPP 248
+ + P
Sbjct: 526 ATQRMLFDTGPR 537
>gi|242373892|ref|ZP_04819466.1| competence protein ComEC [Staphylococcus epidermidis M23864:W1]
gi|242348446|gb|EES40048.1| competence protein ComEC [Staphylococcus epidermidis M23864:W1]
Length = 740
Score = 40.2 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI 132
I + HF+ G ++N+L +P SF++ P+ ++
Sbjct: 340 IISVYHFNQFQWIGFLSNLLFVPFYSFLLFPSIIL 374
>gi|153835241|ref|ZP_01987908.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
harveyi HY01]
gi|148868279|gb|EDL67413.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
harveyi HY01]
Length = 752
Score = 40.2 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 20/158 (12%), Positives = 60/158 (37%), Gaps = 13/158 (8%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI--LSLDNIPFGVMAWGLDI 155
F + + N++ IP F+V+P +A+++ L + + ++ W +
Sbjct: 376 PISGAFFSGTSLVSIAYNLVFIPWFGFLVVPLMFLALIVTPIAFQLAGVLWQLVDW---V 432
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT---NIRHIGSIMIGITIIIL 212
++ + + A + +P ++ + + + +++ + +
Sbjct: 433 LLPLTWSLQFAVGSWHFVSLP---LTLTILAVAICGLLRRFLNRGSLVTLVILVTGVALF 489
Query: 213 F-TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPS 249
+ S+ D+L G L L++K+ ++ Y +
Sbjct: 490 YERTTNSWRVDVLDVGHG-LAVLIEKHGKVALYDTGKA 526
>gi|158320258|ref|YP_001512765.1| ComEC/Rec2-related protein [Alkaliphilus oremlandii OhILAs]
gi|158140457|gb|ABW18769.1| ComEC/Rec2-related protein [Alkaliphilus oremlandii OhILAs]
Length = 501
Score = 40.2 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 72 KISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGL 131
++ K FL E+ + + + HF I + L NI+ +P+L+ P
Sbjct: 365 RVLRKKTGFLGELLSVTLAAQIGTLPLMA-YHFQQISLISLATNIMILPLLA----PMLS 419
Query: 132 IAILLMILSL 141
IA++ ++L L
Sbjct: 420 IALVSIVLGL 429
>gi|326572572|gb|EGE22561.1| competence protein ComEC [Moraxella catarrhalis CO72]
Length = 841
Score = 40.2 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL-DIIIHIAHR 162
F + ++GL+ N+ AI + FV++P LIA + + + WG+ +++ H
Sbjct: 484 FGKVSIWGLVVNLFAIGLFGFVIVPINLIAGAV--FGI-LPELSQLLWGVSSAVLYWLHD 540
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
IG + + + L+ F + + +++ + II+
Sbjct: 541 FLYFGLSSQIGSLGAWLYAPFGMAGFLLSFMVVGLWILPNVLPRVLIILPLVA 593
>gi|313837328|gb|EFS75042.1| metallo-beta-lactamase domain protein [Propionibacterium acnes
HL037PA2]
gi|314927998|gb|EFS91829.1| metallo-beta-lactamase domain protein [Propionibacterium acnes
HL044PA1]
gi|314971712|gb|EFT15810.1| metallo-beta-lactamase domain protein [Propionibacterium acnes
HL037PA3]
Length = 653
Score = 40.2 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 40/114 (35%), Gaps = 6/114 (5%)
Query: 111 GLIANILA---IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
GLIAN+ A +P+ S + + GL A++ L + + II IAH + A
Sbjct: 385 GLIANLAAAPFVPLASALGMATGLFALIWPPLG--APFGRLAGCCVQPIIWIAHVGAKAP 442
Query: 168 NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ + + + + T + + + + T P
Sbjct: 443 SGLLRWPAGGWAVGVL-AGICVGLALVTPAVLTRPWLTALAGLAVLTATVVRPP 495
>gi|242242865|ref|ZP_04797310.1| competence protein ComEC [Staphylococcus epidermidis W23144]
gi|242233678|gb|EES35990.1| competence protein ComEC [Staphylococcus epidermidis W23144]
Length = 706
Score = 40.2 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
I + + HF+ GL++N + +P SF++ P+ +I +L+
Sbjct: 298 ISFLAQLGSIVINTYHFNQFQWIGLLSNFIFVPFYSFILFPSVIIYFILI 347
>gi|239816377|ref|YP_002945287.1| DNA internalization-related competence protein ComEC/Rec2
[Variovorax paradoxus S110]
gi|239802954|gb|ACS20021.1| DNA internalization-related competence protein ComEC/Rec2
[Variovorax paradoxus S110]
Length = 747
Score = 40.2 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 36/94 (38%), Gaps = 6/94 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F + V GL+AN +AIP ++ VV P ++ + L + + AW + + + +
Sbjct: 377 FQQVSVVGLLANAVAIPWVTLVVTPLAMLGAVAPPL------WDLAAWAVQALALLLRWL 430
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI 197
+ P V +++ +
Sbjct: 431 AALPYATLSMAAPPVWMAACGVAGGVLLAMRLPW 464
>gi|323165380|gb|EFZ51167.1| comEC/Rec2-related domain protein [Shigella sonnei 53G]
Length = 340
Score = 40.2 bits (92), Expect = 0.55, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIH 158
FH I + IAN+LAIP+++F+ +P L A+++ L L+ + + L ++
Sbjct: 250 FHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFW 307
>gi|257865355|ref|ZP_05645008.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
gi|257871685|ref|ZP_05651338.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
gi|257799289|gb|EEV28341.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
gi|257805849|gb|EEV34671.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
Length = 609
Score = 40.2 bits (92), Expect = 0.55, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 44/116 (37%), Gaps = 19/116 (16%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F+ + + N+L ++P +A + + +L + + L
Sbjct: 205 FNYFNIAIRMNNLLVD-----FILPVLTLAGIAGLFALKGNVLPSIGFFL---------- 249
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRH---IGSIMIGITIIILFTFP 216
+ + + F+ I+ +LL+ + ++R +G +++G+ I L P
Sbjct: 250 -LIGASLDLVKNSAVFFLLILGGYLLVCLWQASVRWRQRLGMMIVGLAAIGLSVLP 304
>gi|152979387|ref|YP_001345016.1| DNA internalization-related competence protein ComEC/Rec2
[Actinobacillus succinogenes 130Z]
gi|150841110|gb|ABR75081.1| DNA internalization-related competence protein ComEC/Rec2
[Actinobacillus succinogenes 130Z]
Length = 772
Score = 40.2 bits (92), Expect = 0.55, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 30/80 (37%), Gaps = 2/80 (2%)
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
W + I + + ++ + + F+ GL AN++A+P S
Sbjct: 335 RAVRWRNRPIPVKVRWIFALL--HLQFGLLWLFTPVQVALFNGFSWAGLAANLIAVPFFS 392
Query: 124 FVVIPAGLIAILLMILSLDN 143
F+++P L A+L
Sbjct: 393 FLLVPLVLFAVLTDGAGATW 412
>gi|88855882|ref|ZP_01130544.1| hypothetical protein A20C1_11041 [marine actinobacterium PHSC20C1]
gi|88814749|gb|EAR24609.1| hypothetical protein A20C1_11041 [marine actinobacterium PHSC20C1]
Length = 864
Score = 40.2 bits (92), Expect = 0.55, Method: Composition-based stats.
Identities = 28/212 (13%), Positives = 74/212 (34%), Gaps = 26/212 (12%)
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
WT + ++ L + A + +I ++ + + +LA+ ++
Sbjct: 657 GSAEWTSQWRYWFLEALLWSMLAVVALL-----AIPAVRRWERRWPFAFALGMLAVTLVV 711
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR------ISVAHNEFCIGRIPE 177
V G+ A ++ + + + L +I + +S +G +
Sbjct: 712 RTVALGGVQAEGTEKYAVAAVAWTI---ALGWVIARSVTRTQRLIVSALAIVCVVGFFGQ 768
Query: 178 TSFVTIVVEFLLMVFCKTNI---RHIGSIM--IGITIIILFTFPYSFSPDLLI------S 226
IV+ +L++ +++ R + ++ + I + + PD+ I +
Sbjct: 769 PPREAIVLGGVLLLIWVSSLPVPRWLVGVVSTLAGASFITYLIHWQIYPDIEIYSPLLAT 828
Query: 227 EKGNLVALVDKNTLISNYSNPPSFIFSQWKSA 258
+V +V + S + I +W +A
Sbjct: 829 LTSLVVGVVVWKGYAYSTSRGRALI-KRWTAA 859
>gi|148653535|ref|YP_001280628.1| ComEC/Rec2-like protein [Psychrobacter sp. PRwf-1]
gi|148572619|gb|ABQ94678.1| ComEC/Rec2-related protein [Psychrobacter sp. PRwf-1]
Length = 1035
Score = 40.2 bits (92), Expect = 0.56, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 43/106 (40%), Gaps = 4/106 (3%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRAN--IGTY 91
F +F + + A G + + T T + ++ + A + +
Sbjct: 543 GFWLSFIA-VAALVAYGQRWQVSPSSRQEVGRATNTG-VLQRLRVTLKAHFVALFKLQMW 600
Query: 92 GSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
S + + F +P++G + N+ AI + +V++P L+A +L
Sbjct: 601 MSVALLPLSLWLFGKVPLWGFVINLFAIGLFGWVIVPLNLLAGILY 646
>gi|218281279|ref|ZP_03487776.1| hypothetical protein EUBIFOR_00340 [Eubacterium biforme DSM 3989]
gi|218217526|gb|EEC91064.1| hypothetical protein EUBIFOR_00340 [Eubacterium biforme DSM 3989]
Length = 412
Score = 40.2 bits (92), Expect = 0.57, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 51/158 (32%), Gaps = 9/158 (5%)
Query: 43 YKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIK 102
+ GI A + I + Y + + ++ SF + + T + + + +
Sbjct: 128 FTGIIAALFTVEIYHICYERKWYIKMPESVPPMVQDSFAALVPLVLNTIIAVAIANLSLS 187
Query: 103 HFHCIPVYGLIANILAIPILSFVVIPAGLIAI----LLMILSLDNIPFGVMAWGLDIIIH 158
F + LI NILA + +PA LI + LL L W I +
Sbjct: 188 -FGKVAFPQLIMNILAPAVTGMDTLPALLIVMFLTQLLWFFGLHGPSITSAVWATFAIAY 246
Query: 159 IAHRISVAHNEFCIGRIPETSF----VTIVVEFLLMVF 192
A I+ + I + + L +
Sbjct: 247 GAENIAAYTAGQPVQHIFTFGLFYGILCVTGSGLTLGL 284
>gi|134300349|ref|YP_001113845.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfotomaculum reducens MI-1]
gi|134053049|gb|ABO51020.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfotomaculum reducens MI-1]
Length = 794
Score = 40.2 bits (92), Expect = 0.58, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 44/111 (39%), Gaps = 5/111 (4%)
Query: 84 IRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
+ + + + +F+ + ++AN+L + ++ +++ G + +L+ + L
Sbjct: 374 LLITVPLAAQLATLPLVTLYFNLVSQVSILANLLTVHLVG-LIMLFGGLDLLIGTIYLPL 432
Query: 144 IPFGVMAWG--LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
+D+ I + + + IP + + ++L++F
Sbjct: 433 TSLFNSGISSLIDLFIGLVQFCNSLPSASF--YIPTPPLWLVFLYYVLLIF 481
>gi|260556525|ref|ZP_05828743.1| metallo-beta-lactamase superfamily hydrolase [Acinetobacter
baumannii ATCC 19606]
gi|260409784|gb|EEX03084.1| metallo-beta-lactamase superfamily hydrolase [Acinetobacter
baumannii ATCC 19606]
Length = 810
Score = 40.2 bits (92), Expect = 0.61, Method: Composition-based stats.
Identities = 22/149 (14%), Positives = 53/149 (35%), Gaps = 6/149 (4%)
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM-- 137
F++++ + S + F I + NI+A+PI+ V++P ++A
Sbjct: 408 FMSKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPIVGGVIVPLNIMAACAWFV 467
Query: 138 --ILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
N+ F L I++ + + S + I +++ K
Sbjct: 468 IKPFG--NMLFHFNDMLLSILLSCLGLLEKLSLPLQGISLTPLSLLAISCAIIILFLPKG 525
Query: 196 NIRHIGSIMIGITIIILFTFPYSFSPDLL 224
+ I+ + ++I+ ++L
Sbjct: 526 ILPKTWGILCCLPLVIMNKTSQQIQLNIL 554
>gi|242279647|ref|YP_002991776.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfovibrio salexigens DSM 2638]
gi|242122541|gb|ACS80237.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfovibrio salexigens DSM 2638]
Length = 801
Score = 40.2 bits (92), Expect = 0.61, Method: Composition-based stats.
Identities = 47/266 (17%), Positives = 81/266 (30%), Gaps = 31/266 (11%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
FD F ++ I FY P S ++ K + F + ANI
Sbjct: 359 FDLGFQLSVLAVAGISLFY--PVFARLMPSGHSLLAKAARFVLAVFFVSLSANIALL--- 413
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-------SLDNIPFG 147
+I +F + L NIL +PI+ VV+P + LL SL +
Sbjct: 414 ---PIIIWNFGVLTPNFLF-NILFVPIIGSVVMPICGVGGLLFSYISPELSHSLFGLGAK 469
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
V W L ++ + F +V+ +L+V N R ++ +
Sbjct: 470 VFEWLLQLVRDAVSLGLLPEYAFYRPHWEGLLIYYLVLGAVLLVIY-GNSRQARLMLFLV 528
Query: 208 TIIILFTFPYSFSP-----DLLISEKGNLVALVDKNTLISNYSNPPSF---------IFS 253
++ F P D+L + + V + + F I
Sbjct: 529 VLLFGVRLSGEFGPERVRMDVLDTGQSQCVVITGPKGTRTVVDGGGGFGRTFDMGRSIVG 588
Query: 254 QWKSALITPFHEAPHVQKEDLQEKNQ 279
W + P + + D
Sbjct: 589 PWLTYGHLPRVDNIFMTHGDRDHAGG 614
>gi|332141277|ref|YP_004427015.1| DNA internalization-related competence protein ComEC/Rec2
[Alteromonas macleodii str. 'Deep ecotype']
gi|327551299|gb|AEA98017.1| DNA internalization-related competence protein ComEC/Rec2
[Alteromonas macleodii str. 'Deep ecotype']
Length = 855
Score = 40.2 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 22/184 (11%), Positives = 67/184 (36%), Gaps = 15/184 (8%)
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
W + ++++ + + + + F L+AN++A+P+++ +++
Sbjct: 433 WFLITVFGLQRNAWYVVLIKLQLALTFIMMPLTLIWFGSASFIALVANLIALPLVT-LIL 491
Query: 128 PAGLIAILLMIL-------SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
P GL+++L + L ++ + ++ +S I S
Sbjct: 492 PIGLLSLLAIHFFDNTVVAFLGSLILKQSDYLFGYLLEYLAYLSKYELSLVYAPIESGSA 551
Query: 181 VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD-----LLISEKGNLVALV 235
+ + ++ R+ + +++ ++ + SP+ L + + G AL+
Sbjct: 552 LCFLTAIVVTFLP--PWRYKNVCAVLLSLPLIVEVCWWVSPNDSAWTLHVLDAGQATALM 609
Query: 236 DKNT 239
Sbjct: 610 VTKG 613
>gi|310659110|ref|YP_003936831.1| competence membrane protein [Clostridium sticklandii DSM 519]
gi|308825888|emb|CBH21926.1| putative competence membrane protein precursor [Clostridium
sticklandii]
Length = 434
Score = 40.2 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 50/125 (40%), Gaps = 13/125 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F+ + + +IG FY + I ++ K I++ ++
Sbjct: 266 LYDAGFTLSFMAVISIGMFY---QSINATFEKTKILPKYIANF---------TSMTISAQ 313
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+F I + + +N++++P+++ + P L +++L + M L
Sbjct: 314 VLTLPLTYFYFQRISIISIFSNLISVPLVT-LTYPFMLSSLVLYKIPFLGNLLVSMVKSL 372
Query: 154 DIIIH 158
I++
Sbjct: 373 KFILY 377
>gi|307244345|ref|ZP_07526459.1| ComEC/Rec2-like protein [Peptostreptococcus stomatis DSM 17678]
gi|306492311|gb|EFM64350.1| ComEC/Rec2-like protein [Peptostreptococcus stomatis DSM 17678]
Length = 411
Score = 40.2 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 28/74 (37%), Gaps = 13/74 (17%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
+ ++ +F + GLI NIL +P + +V LD I
Sbjct: 292 TCLAANILTFPLVVYNFKTFSMVGLIGNILILPFIGLIVF-------------LDMISLL 338
Query: 148 VMAWGLDIIIHIAH 161
+ LD+ + +A+
Sbjct: 339 LYGISLDLALLVAY 352
>gi|182412291|ref|YP_001817357.1| ComEC/Rec2-related protein [Opitutus terrae PB90-1]
gi|177839505|gb|ACB73757.1| ComEC/Rec2-related protein [Opitutus terrae PB90-1]
Length = 545
Score = 40.2 bits (92), Expect = 0.63, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 52/164 (31%), Gaps = 15/164 (9%)
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
TW W + IG S +++ I F L+AN+ IP S V+
Sbjct: 385 TWRWHHRARAAGWHATLTAVAIGIAASLVSAVTGIMFFGLFTPGSLLANLWLIPAASAVI 444
Query: 127 IPAGLIAILLMILSL------DNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
+ AG ++++ +L N ++ WG+D + +S+ F P
Sbjct: 445 L-AGFVSMVCGVLGFTTGSVLANHAAALLLWGIDA--GVEAFVSLPGAWFNASFRPPWLG 501
Query: 181 VTIVVEFLLMVF------CKTNIRHIGSIMIGITIIILFTFPYS 218
+ L + R + + F +
Sbjct: 502 GCALAALLGTMVSGYAGRWAGWQRGFWLPFAVVAATLAFAVRFG 545
>gi|241889683|ref|ZP_04776981.1| ComEC/Rec2-related protein [Gemella haemolysans ATCC 10379]
gi|241863305|gb|EER67689.1| ComEC/Rec2-related protein [Gemella haemolysans ATCC 10379]
Length = 641
Score = 40.2 bits (92), Expect = 0.64, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 28/52 (53%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL 139
I + ++ L+ +F+ I + +NI+ +PI S V+ P + + L+ ++
Sbjct: 353 ISVISTLASIPILMYNFYNIVYISVFSNIILVPIFSVVIFPLVIFSYLVFLI 404
>gi|332666397|ref|YP_004449185.1| ComEC/Rec2-like protein [Haliscomenobacter hydrossis DSM 1100]
gi|332335211|gb|AEE52312.1| ComEC/Rec2-related protein [Haliscomenobacter hydrossis DSM 1100]
Length = 690
Score = 40.2 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 26/188 (13%), Positives = 72/188 (38%), Gaps = 17/188 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F + I+ I F + W+ ++ ++ ++ ++G
Sbjct: 354 LWDIGFQLSFLAIAGIVAF--------QPWIYALWSA---PNVVLDYVWKL-TSVGIAAQ 401
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL-LMILSLDNIPFGVMAWG 152
S I +FH PV+ ++ ++A+P+ +++ L+ +L M + I ++A+
Sbjct: 402 LSTGPLSIFYFHQFPVFFWLSGLVAVPLSGVILVLGLLLFVLEAMHIPAMWIG-KLLAFS 460
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE---FLLMVFCKTNIRHIGSIMIGITI 209
+ ++ + I G E ++ L + + + + + + + +
Sbjct: 461 IQLLNRLIEAIHQLPYAVASGFWWEAWATLVMYGVLSLLCIALYRRKLGWLNAALALLLV 520
Query: 210 IILFTFPY 217
+ +P
Sbjct: 521 WTMAHWPG 528
>gi|298372067|ref|ZP_06982057.1| ComEC/Rec2 family protein [Bacteroidetes oral taxon 274 str. F0058]
gi|298274971|gb|EFI16522.1| ComEC/Rec2 family protein [Bacteroidetes oral taxon 274 str. F0058]
Length = 692
Score = 40.2 bits (92), Expect = 0.66, Method: Composition-based stats.
Identities = 16/130 (12%), Positives = 47/130 (36%), Gaps = 2/130 (1%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV-IPAGLIAILLMILSLDN 143
++ A+ + +FH P Y L++N + +P+ ++ + L+ + + + +
Sbjct: 391 LTSVSIAAQLGAAPLCLYYFHQFPNYFLLSNFIGVPLSGIIIYLDVALLITNSIPM-IGS 449
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSI 203
I ++ ++ I I + I + I++ +
Sbjct: 450 IVSWLLVTTTKLMYGGLQIIENLPFVTTNIWIDSVQLILIYASVFAIGLLMYKIKYKYFL 509
Query: 204 MIGITIIILF 213
+ ++ I+ F
Sbjct: 510 LFFVSAILFF 519
>gi|294505830|ref|YP_003569888.1| DNA internalization-related competence protein ComEC/Rec2
[Salinibacter ruber M8]
gi|294342158|emb|CBH22936.1| DNA internalization-related competence protein ComEC/Rec2
[Salinibacter ruber M8]
Length = 829
Score = 39.8 bits (91), Expect = 0.68, Method: Composition-based stats.
Identities = 19/154 (12%), Positives = 44/154 (28%), Gaps = 9/154 (5%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
+ L+ HF + V GL+ N++ IP + A + + +
Sbjct: 425 GTTSAAAILGTAPVLLYHFGWVSVAGLLLNMVGIPCTGLALTSAIATVAVGGLWPMAAAS 484
Query: 146 FG-VMAWGLDIIIHIAHRISVA--HNEFCIGRIPETSFVTIVVEFLLMVFC---KTNIRH 199
FG L ++ + + + + + + + R
Sbjct: 485 FGSAADVFLQGLLATSRYGAAWFSWAGIRMATPDLWELTALGAGLIAVAQWPRPRLRWRW 544
Query: 200 I---GSIMIGITIIILFTFPYSFSPDLLISEKGN 230
I G M + + + D++ + G
Sbjct: 545 IVIGGLFMTASVWGPVVGGGTAPTLDIVFFDVGQ 578
>gi|285018588|ref|YP_003376299.1| competence-related DNA-transformation transporter [Xanthomonas
albilineans GPE PC73]
gi|283473806|emb|CBE70794.1| putative competence-related dna-transformation transporter protein
[Xanthomonas albilineans]
Length = 849
Score = 39.8 bits (91), Expect = 0.68, Method: Composition-based stats.
Identities = 27/192 (14%), Positives = 64/192 (33%), Gaps = 24/192 (12%)
Query: 45 GISAIGYFYSIPKMIYSSESHNT-----WTWKKISSIKQSFLNEIRANIGTYGSASAS-- 97
++AI + P + S+ + W + + +++R + G A+
Sbjct: 354 ALAAIVMLVADPLAVLSAGFWLSFFGVAWLVWCMPKAGSGWRDKLREFLSAQGVATLGLL 413
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF--------GVM 149
F G +AN+LAIP S VV+P L+ L + + + +
Sbjct: 414 PLSTMLFGQASAVGPLANLLAIPWWSLVVVPLALLGTALDTVHVGAGIWVWRAAAFCFDL 473
Query: 150 AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITI 209
W + ++ + E + + ++ ++ R + + + +
Sbjct: 474 TWPVFTMLGESRFALWWLPEAR-----DWALPLALLGAFWLLLP----RAVPGKPLAVLL 524
Query: 210 IILFTFPYSFSP 221
+ +P P
Sbjct: 525 WLPLFWPPLELP 536
Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 23/208 (11%), Positives = 66/208 (31%), Gaps = 10/208 (4%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIY--SSESHNTW 68
A RL P G + PG FD + + I+A GY + + + + W
Sbjct: 161 LRAGAHWRLSLRLRAPRGLSNPGGFDAEAYALAQRIAASGYVVAPRAAVQLAPGQGIDAW 220
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
+ + I + + + + + + GL +++AI ++
Sbjct: 221 RERVSARIAATVPSASSRYVQALALGDTRRLDDRDWRILRAAGL-THLIAISGFHVGLVA 279
Query: 129 AGLIAILLMILSLDNIPFGVMAWGL---DIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
G ++ + + +A + + +P ++
Sbjct: 280 GG----CALLAGGLWRLWPRLGRSCPRHQATAMLAMFGAAGYTVLSGMALPTVRTALMIA 335
Query: 186 EFLLMVFCKTNIRHIGSIMIGITIIILF 213
++ + +R + ++ + ++++
Sbjct: 336 VVVVARLWRRPVRVVDALALAAIVMLVA 363
>gi|225016334|ref|ZP_03705526.1| hypothetical protein CLOSTMETH_00237 [Clostridium methylpentosum
DSM 5476]
gi|224950877|gb|EEG32086.1| hypothetical protein CLOSTMETH_00237 [Clostridium methylpentosum
DSM 5476]
Length = 730
Score = 39.8 bits (91), Expect = 0.71, Method: Composition-based stats.
Identities = 21/170 (12%), Positives = 52/170 (30%), Gaps = 13/170 (7%)
Query: 76 IKQSFLNEIRA--NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
+ L I ++ + + F V ++N++A + + +++ L
Sbjct: 358 MGVRLLEGICENFSVSLAAVLFTAPVSMLAFQEFSVIAPVSNLVACLMFAPLLVAGFLTG 417
Query: 134 ILLMILSLDNIPFGVMAWGLDIII-HIAHRISVAH---NEFCIGRIPETSFVTIVVEFLL 189
L M+ G + L ++ IA + G + V +
Sbjct: 418 ALGMVWQGAGELLGRITRSLAWMLSKIAEFFANFPYSHLPLGFGFVKVW--VLCAAGLIG 475
Query: 190 M-VFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKN 238
+ + ++ R + + I++L + VA+V
Sbjct: 476 LSMLFRSRRRMVRYSALLSVIVLLGGILSHQ----VFFRDVVCVAVVGNG 521
>gi|218960725|ref|YP_001740500.1| hypothetical protein; putative membrane protein [Candidatus
Cloacamonas acidaminovorans]
gi|167729382|emb|CAO80293.1| hypothetical protein; putative membrane protein [Candidatus
Cloacamonas acidaminovorans]
Length = 769
Score = 39.8 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 63/184 (34%), Gaps = 15/184 (8%)
Query: 46 ISAIGYFYSIP--KMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKH 103
+S + FY +P ++ + N +K ++ ++ L + S + + F + +
Sbjct: 330 VSVLVIFYGLPNFRLFSRDKILNNPFYKVLNDLQDGIL------LSALISIAITPFTLYY 383
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHI--AH 161
F + G+I N L IP+ ++ P + +L+ S V+ + I+ I
Sbjct: 384 FGTASLNGIIGNTLGIPLSGILL-PLSFL-VLITPQSWYLTKIFVIVYRAVNILWIRWMQ 441
Query: 162 RISVAHNEFCIGRIPETSFVTIVVEFLL-MVFCKTNIRHI--GSIMIGITIIILFTFPYS 218
+ + + V L + + I + + + P
Sbjct: 442 FCYNLPFSLSANYLSLFQAIALAVVILWGFFLIRGKFKFALQAVIPMSLLVTGFMLIPTW 501
Query: 219 FSPD 222
P+
Sbjct: 502 QKPE 505
>gi|255659304|ref|ZP_05404713.1| DNA internalization-related competence protein ComEC/Rec2
[Mitsuokella multacida DSM 20544]
gi|260848767|gb|EEX68774.1| DNA internalization-related competence protein ComEC/Rec2
[Mitsuokella multacida DSM 20544]
Length = 803
Score = 39.8 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 22/168 (13%), Positives = 58/168 (34%), Gaps = 19/168 (11%)
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
W + + + + + + L +F + + L+AN L +PIL ++I
Sbjct: 380 AWLRARGLPDAIAMSLAITLS--AQLATLPVLAWYFGQVSLSALLANFLVVPILELIIIF 437
Query: 129 AGLIAILLMILSLDNIPFGVM-----AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT- 182
+L +L VM +++ +A + + + + V
Sbjct: 438 GLFAGLLAFLLPFFGHVIFVMTSLMLGLAAELVHMLAR---LPGGIVYLAAMAWPTAVLY 494
Query: 183 -IVVEFLLMV-----FCKTNIRHIGSIMIGITIIILFTFP--YSFSPD 222
+ + LL+ + + + + +++ + P + +PD
Sbjct: 495 YLALGTLLLGEEQREWLRARLTPWRRPAFALFLVLAASIPLYRAVTPD 542
>gi|59713606|ref|YP_206381.1| putative recombination protein [Vibrio fischeri ES114]
gi|59481854|gb|AAW87493.1| putative recombination protein [Vibrio fischeri ES114]
Length = 767
Score = 39.8 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 2/79 (2%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL--D 142
I + F I N++A+P +S +P L+A+ +LSL
Sbjct: 379 VVFIQFGLFTLLTPIQGYFFSGISYLSPFINLIAVPWVSLFTVPLSLVAVAFDMLSLPIS 438
Query: 143 NIPFGVMAWGLDIIIHIAH 161
+ + L I +A
Sbjct: 439 SWFWKGANGSLKPIWWLAK 457
>gi|325282510|ref|YP_004255051.1| DNA internalization-related competence protein ComEC/Rec2
[Deinococcus proteolyticus MRP]
gi|324314319|gb|ADY25434.1| DNA internalization-related competence protein ComEC/Rec2
[Deinococcus proteolyticus MRP]
Length = 753
Score = 39.8 bits (91), Expect = 0.75, Method: Composition-based stats.
Identities = 36/220 (16%), Positives = 67/220 (30%), Gaps = 37/220 (16%)
Query: 19 GIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQ 78
G RL PPS + A G + P + + ++ +
Sbjct: 308 GRGRLDPPS---------------LVALVAAGLLVAYPLWLVTPGFQLSFLAVGGLLLLP 352
Query: 79 SFLNEIRAN---------------IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
L + A + A+ + F +P+ L AN+LA P+++
Sbjct: 353 RVLARLPAAWTRPGPPLWLTGSLAVTLLAQAATLPLVAGSFGGVPLSSLPANLLAGPLMA 412
Query: 124 FVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
++ P G +A +L L L + A L + +
Sbjct: 413 LLI-PLGFLAGVLGPLGAVLKWPLEALSAALLWLAETFGRWPLLPWGAVGPAGYLAYGLA 471
Query: 182 TIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP 221
+ L ++ IR ++ + I+L P SP
Sbjct: 472 AL-AGGLWLL---GRIRPPAALATALACILLTALPPRLSP 507
>gi|281420921|ref|ZP_06251920.1| ComEC/Rec2 family protein [Prevotella copri DSM 18205]
gi|281405213|gb|EFB35893.1| ComEC/Rec2 family protein [Prevotella copri DSM 18205]
Length = 433
Score = 39.8 bits (91), Expect = 0.78, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 42/117 (35%), Gaps = 15/117 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESH-NTWTWKKISSIKQSFLNEIRANIGTYG 92
LF+ +F + +++I F++ + S W W + +
Sbjct: 260 LFELSFQLSFLAVASILLFFTPLYTLLPIRSRFIRWAWGLL-------------CVSLAA 306
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM 149
++ F I Y L+ N +AIP + ++ + IL L+L V+
Sbjct: 307 QIGTLPVIVYSFGRISCYSLLTNYIAIPAATLILYLGAAL-ILFSPLTLWAPIAPVV 362
>gi|226324467|ref|ZP_03799985.1| hypothetical protein COPCOM_02248 [Coprococcus comes ATCC 27758]
gi|225206915|gb|EEG89269.1| hypothetical protein COPCOM_02248 [Coprococcus comes ATCC 27758]
Length = 744
Score = 39.8 bits (91), Expect = 0.78, Method: Composition-based stats.
Identities = 24/163 (14%), Positives = 58/163 (35%), Gaps = 13/163 (7%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWK------KISSIKQSFLNEIRANIGTYGSASASI 98
GI+ IG + P ++++ ++ + K F + +R ++ +
Sbjct: 282 GIAEIGLLLANPLRLFTAGFQLSFAAVLGIYLIGSGNKKGRFSDSVRMSVRLWSFLL--P 339
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPA-GLIAILLMILSLDNI----PFGVMAWGL 153
+ H++ +Y N+L IP+ S +++ +A++L+ +I + + W L
Sbjct: 340 VTLWHYYETCLYAPAWNLLVIPMASVLLLCGSAGMAVMLIPCGAGDIMQSALWKITEWIL 399
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN 196
+ + I P + LL +
Sbjct: 400 LFYEKGSGLLLELPGARWIPGRPRLWQIACYYGVLLFYLWRKR 442
>gi|78189074|ref|YP_379412.1| ComEC/Rec2-related protein [Chlorobium chlorochromatii CaD3]
gi|78171273|gb|ABB28369.1| ComEC/Rec2-related protein [Chlorobium chlorochromatii CaD3]
Length = 755
Score = 39.8 bits (91), Expect = 0.78, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 69/182 (37%), Gaps = 16/182 (8%)
Query: 47 SAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHC 106
+ + F P + + + T + + S + + A+IG S + +F
Sbjct: 390 AVLALFLVYPLLHFPRPKNRTLLLSIVWFLLDSIIITLAASIGV------SPVIAYYFGT 443
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVA 166
+ +AN IP++ F + + +L++ L V A G + + + ++
Sbjct: 444 FSLISFVAN---IPVVFFSTLLMYALVPMLVVYGLSQALASVFAAGAFWLARMTLQSALW 500
Query: 167 HNEFCIGRIPE-------TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
+ F IP + ++ LL+ K R + ++G+ + + ++ +
Sbjct: 501 FSNFSFASIPLKLDAVEVWLYYIVLAAVLLLATRKAWSRVAITFLLGVNLFVWYSLLFRP 560
Query: 220 SP 221
+P
Sbjct: 561 NP 562
>gi|86146938|ref|ZP_01065256.1| Rec2-related protein [Vibrio sp. MED222]
gi|85835188|gb|EAQ53328.1| Rec2-related protein [Vibrio sp. MED222]
Length = 409
Score = 39.8 bits (91), Expect = 0.79, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 52/138 (37%), Gaps = 9/138 (6%)
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA----ILLMILSLDNIPFGV 148
+ + F + F+ + + + N+L +P +S VVIP +A ++L +S +
Sbjct: 3 TFLIAPFSMLFFNGVSLVSVFYNLLLLPWVSMVVIPLLFLAMFFSLILAPVS-GGVGLTT 61
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVT----IVVEFLLMVFCKTNIRHIGSIM 204
GL + + +S+ F + F I + L++F R+ +
Sbjct: 62 FNNGLSEQLWMLVDLSLEPLVFSLPFSERFWFQVDNHTIELSVFLILFFGFVSRYFKRAL 121
Query: 205 IGITIIILFTFPYSFSPD 222
+ I + + P
Sbjct: 122 SILIITVFVLWWEFGKPQ 139
>gi|261491898|ref|ZP_05988476.1| putative competence protein EC [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261494439|ref|ZP_05990926.1| putative competence protein EC [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261309924|gb|EEY11140.1| putative competence protein EC [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261312445|gb|EEY13570.1| putative competence protein EC [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 760
Score = 39.8 bits (91), Expect = 0.80, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 33/116 (28%), Gaps = 23/116 (19%)
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
L ++ S + F I + L+AN++ +P+ SF+++P L +L
Sbjct: 364 LWLSLLHLQIGIWLIFSPVQLYFFEGISAFALLANLIIVPLYSFLLVPLILFTLLTD--- 420
Query: 141 LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN 196
+ S + + + + +
Sbjct: 421 --------------------NLFSTWLLADYLAQFSLWLLDPFSNAWFALSHWQQW 456
>gi|326564634|gb|EGE14852.1| competence protein ComEC [Moraxella catarrhalis 46P47B1]
Length = 842
Score = 39.8 bits (91), Expect = 0.82, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL-DIIIHIAHR 162
F + ++GL+ N+ AI + FVV+P LIA + + + WG +++ H
Sbjct: 485 FGKVSIWGLVVNLFAIGLFGFVVVPINLIAGAV--FGI-LPELSQLLWGTSSAVLYWLHD 541
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
IG + + + L+ F + + +++ + II+
Sbjct: 542 FLYFGLSSQIGSLGAWLYAPFGMAGFLLSFMVVGLWILPNVLPRVLIILPLVA 594
>gi|209809510|ref|YP_002265048.1| putative competence-related protein [Aliivibrio salmonicida
LFI1238]
gi|208011072|emb|CAQ81490.1| putative competence-related protein [Aliivibrio salmonicida
LFI1238]
Length = 768
Score = 39.8 bits (91), Expect = 0.82, Method: Composition-based stats.
Identities = 38/271 (14%), Positives = 83/271 (30%), Gaps = 22/271 (8%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI--PFGVMAWGLDI 155
F + + + N++A+P +S V +P L A+++ + + + + L
Sbjct: 393 PVQSYFFGGVSLLSPLINLIAVPWVSMVTVPITLFAVVVSFADSEWLKGLWQLSDLSLLP 452
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+ H+A + I I+ L+ F I+ +++L
Sbjct: 453 VWHLAESVEG-SWISLSSDISLFIIGLIIFLGLMAFFS------FKIILPIFALLMLLMA 505
Query: 216 PYSFSPDLLIS--EKGNLVALVDKN-TLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
P+ + + G+ +A++ ++ Y W + I P + K
Sbjct: 506 VTKSKPEWQVDFLDVGHGLAILIESKGKAILYDTGMK-----WNNGSIAESVIEPILHKR 560
Query: 273 DLQEKNQSSL--KEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDI 330
+ + L + S + V D + + ++
Sbjct: 561 GISTLDGLILSHSDGDHSGGKDYLVTHFSPRWVRRSEVDSKALPCIKGSRWKEGMMEFEV 620
Query: 331 L---ITTIRDINTKLCNVSLLITPEILQKQG 358
L T R N C V L + + G
Sbjct: 621 LWPPTLTKRAYNPHSCVVKLTVDKWVFLFTG 651
>gi|326562730|gb|EGE13032.1| competence protein ComEC [Moraxella catarrhalis 103P14B1]
gi|326574168|gb|EGE24116.1| competence protein ComEC [Moraxella catarrhalis 101P30B1]
Length = 841
Score = 39.8 bits (91), Expect = 0.82, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL-DIIIHIAHR 162
F + ++GL+ N+ AI + FVV+P LIA + + + WG +++ H
Sbjct: 484 FGKVSIWGLVVNLFAIGLFGFVVVPINLIAGAV--FGI-LPELSQLLWGTSSAVLYWLHD 540
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
IG + + + L+ F + + +++ + II+
Sbjct: 541 FLYFGLSSQIGSLGAWLYAPFGMAGFLLSFMVVGLWILPNVLPRVLIILPLVA 593
>gi|213421793|ref|ZP_03354859.1| hypothetical protein Salmonentericaenterica_30338 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 186
Score = 39.8 bits (91), Expect = 0.83, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 48/119 (40%), Gaps = 8/119 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 59 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 118
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
+ + I ++ +L ++ + N+ + ++++ +
Sbjct: 119 NAL-----PQGWVNIDNRWQWLTLLPWLTLIAWRLNVWRTWPAVCLCGLLLMSWPLWRP 172
>gi|205374271|ref|ZP_03227070.1| late competence protein ComEC [Bacillus coahuilensis m4-4]
Length = 739
Score = 39.8 bits (91), Expect = 0.83, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 40/111 (36%), Gaps = 8/111 (7%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN--I 144
I + L+ F + + GL+ N++ +P+ + +++P L L +LS I
Sbjct: 338 TISITSFLGSLPILVNTFFEVSLIGLLVNVVYVPLFTVILLPLSLFCYLCTLLSTSWAEI 397
Query: 145 PFGVMA----WGLDIIIHIA--HRISVAHNEFCIGRIPETSFVTIVVEFLL 189
P ++ W + + I+ + + + + I
Sbjct: 398 PIRLLNSIVQWTDSLTLWISERRVTTFITGKLNLMEMIGLILGVIAFYIFW 448
>gi|163802113|ref|ZP_02196009.1| Rec2-related protein [Vibrio sp. AND4]
gi|159174254|gb|EDP59062.1| Rec2-related protein [Vibrio sp. AND4]
Length = 752
Score = 39.8 bits (91), Expect = 0.83, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 66/177 (37%), Gaps = 20/177 (11%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAH 161
F + + N++ IP F+V+P +A++ + L + ++ W +++ +
Sbjct: 382 FSGTSLVSIAYNLIFIPFFGFLVVPLIFLALIATPIISQLAEALWQLLDW---VLLPLTW 438
Query: 162 RISVAHNEFCIGRIPETSFVTIVVEFLLMV-FCKTNIRHIGSIMIGITIIILFTF----P 216
+ A + +P +T+ + L + K + I + + F
Sbjct: 439 SLQFAVGSWYTLSLP----LTLSMSALALCGLLKRFLSKRALFPIISVVTGVSIFYERGT 494
Query: 217 YSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKED 273
++ D+L G L L++K ++ Y W+S I AP + +
Sbjct: 495 SAWRVDVLDVGHG-LAVLIEKQGKVALYDTG-----KIWQSGSIAQQVIAPILHRRG 545
>gi|331701118|ref|YP_004398077.1| DNA internalization-related competence protein ComEC/Rec2
[Lactobacillus buchneri NRRL B-30929]
gi|329128461|gb|AEB73014.1| DNA internalization-related competence protein ComEC/Rec2
[Lactobacillus buchneri NRRL B-30929]
Length = 730
Score = 39.8 bits (91), Expect = 0.84, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 47/126 (37%), Gaps = 13/126 (10%)
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
L+ H + + N++ +P+ V+ P +I +++ + + +
Sbjct: 336 FLTVPILLFHLYEWHFLSVAVNLIVLPLFGRVIFPLVIIGVIV------GLVAETLVLPI 389
Query: 154 DIIIHI----AHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITI 209
D+ +HI + +S G+ P V I++ +++ +R +IGI
Sbjct: 390 DMFLHIFNDGLNAVSRLPGMLTFGK-PALPIVLIMLAVTMLLAVVDRVR--APKLIGILA 446
Query: 210 IILFTF 215
+
Sbjct: 447 AVYLVT 452
>gi|296113529|ref|YP_003627467.1| competence protein ComEC [Moraxella catarrhalis RH4]
gi|295921223|gb|ADG61574.1| competence protein ComEC [Moraxella catarrhalis RH4]
Length = 842
Score = 39.8 bits (91), Expect = 0.84, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL-DIIIHIAHR 162
F + ++GL+ N+ AI + FVV+P LIA + + + WG +++ H
Sbjct: 485 FGKVSIWGLVVNLFAIGLFGFVVVPINLIAGAV--FGI-LPELSQLLWGTSSAVLYWLHD 541
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
IG + + + L+ F + + +++ + II+
Sbjct: 542 FLYFGLSSQIGSLGAWLYAPFGMAGFLLSFMVVGLWILPNVLPRVLIILPLVA 594
>gi|254361282|ref|ZP_04977425.1| possible competence protein EC [Mannheimia haemolytica PHL213]
gi|153092778|gb|EDN73821.1| possible competence protein EC [Mannheimia haemolytica PHL213]
Length = 760
Score = 39.8 bits (91), Expect = 0.84, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 33/116 (28%), Gaps = 23/116 (19%)
Query: 81 LNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
L ++ S + F I + L+AN++ +P+ SF+++P L +L
Sbjct: 364 LWLSLLHLQIGIWLIFSPVQLYFFEGISAFALLANLIIVPLYSFLLVPLILFTLLTD--- 420
Query: 141 LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN 196
+ S + + + + +
Sbjct: 421 --------------------NLFSTWLLADYLAQFSLWLLDPFSNAWFALSHWQQW 456
>gi|14591585|ref|NP_143667.1| hypothetical protein PH1836 [Pyrococcus horikoshii OT3]
gi|3258273|dbj|BAA30956.1| 338aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 338
Score = 39.8 bits (91), Expect = 0.85, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 47/133 (35%), Gaps = 10/133 (7%)
Query: 116 ILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM-AWGLDIIIHIAHRISVAHNEFCIGR 174
++ + I F++ GL ++ ++LSL + +M + L + I+
Sbjct: 13 VIILGIAGFIIWKWGLTMLVRIVLSLGFLGLTLMLGFFLALTIYAESWKYALL------- 65
Query: 175 IPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVAL 234
F I + + +G I++ I+ F Y PDL I+++
Sbjct: 66 --LLPFTAISAYGTYLSITWQKLGIVGGIIVFFIIVAAFGIWYISEPDLTIADRFRSAEK 123
Query: 235 VDKNTLISNYSNP 247
++ +
Sbjct: 124 LEMMGRYKQAARK 136
>gi|118579803|ref|YP_901053.1| DNA internalization-related competence protein ComEC/Rec2
[Pelobacter propionicus DSM 2379]
gi|118502513|gb|ABK98995.1| DNA internalization-related competence protein ComEC/Rec2
[Pelobacter propionicus DSM 2379]
Length = 808
Score = 39.8 bits (91), Expect = 0.86, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 61/184 (33%), Gaps = 15/184 (8%)
Query: 32 PGLFDFNFSSYYKGISAIGYFYSIPKMIYSSES-HNTWTWKKISSIKQSFLNEIRANIGT 90
P LF +F + ++ G +P+++ S W + S I +
Sbjct: 357 PSLFHISFQLSF--LALWGMVLLVPRIMGRFGSIRRGWARSLLRFCAVSCAASIATVVPL 414
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGV 148
+ F+ + G++AN L +P+L + + AG ++LL+ + L +
Sbjct: 415 ----------LYVFNQASLNGILANFLVVPLLGYGAVLAGFCSLLLVPVCAPLARLFMWA 464
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGIT 208
+ + + + G ++ L +R ++ +
Sbjct: 465 TGKLVAVSNRLVEEFARLPLITFGGITALDMLAFLLFMGLATFVRPGRVRTTLCLLTPLL 524
Query: 209 IIIL 212
I +
Sbjct: 525 AIAI 528
>gi|326575607|gb|EGE25531.1| competence protein ComEC [Moraxella catarrhalis O35E]
Length = 842
Score = 39.8 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL-DIIIHIAHR 162
F + ++GL+ N+ AI + FVV+P LIA + + + WG +++ H
Sbjct: 485 FGKVSIWGLVVNLFAIGLFGFVVVPINLIAGAV--FGI-LPELSQLLWGTSSAVLYWLHD 541
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
IG + + + L+ F + + +++ + II+
Sbjct: 542 FLYFGLSSQIGSLGAWLYAPFGMAGFLLSFMVVGLWILPNVLPRVLIILPLVA 594
>gi|326568578|gb|EGE18649.1| competence protein ComEC [Moraxella catarrhalis BC7]
Length = 842
Score = 39.8 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL-DIIIHIAHR 162
F + ++GL+ N+ AI + FVV+P LIA + + + WG +++ H
Sbjct: 485 FGKVSIWGLVVNLFAIGLFGFVVVPINLIAGAV--FGI-LPELSQLLWGTSSAVLYWLHD 541
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
IG + + + L+ F + + +++ + II+
Sbjct: 542 FLYFGLSSQIGSLGAWLYAPFGMAGFLLSFMVVGLWILPNVLPRVLIILPLVA 594
>gi|326565451|gb|EGE15622.1| competence protein ComEC [Moraxella catarrhalis 12P80B1]
Length = 842
Score = 39.8 bits (91), Expect = 0.87, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL-DIIIHIAHR 162
F + ++GL+ N+ AI + FVV+P LIA + + + WG +++ H
Sbjct: 485 FGKVSIWGLVVNLFAIGLFGFVVVPINLIAGAV--FGI-LPELSQLLWGTSSAVLYWLHD 541
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
IG + + + L+ F + + +++ + II+
Sbjct: 542 FLYFGLSSQIGSLGAWLYAPFGMAGFLLSFMVVGLWILPNVLPRVLIILPLVA 594
>gi|311280173|ref|YP_003942404.1| DNA internalization-related competence protein ComEC/Rec2
[Enterobacter cloacae SCF1]
gi|308749368|gb|ADO49120.1| DNA internalization-related competence protein ComEC/Rec2
[Enterobacter cloacae SCF1]
Length = 751
Score = 39.4 bits (90), Expect = 0.88, Method: Composition-based stats.
Identities = 19/147 (12%), Positives = 52/147 (35%), Gaps = 3/147 (2%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS---LDNIPFGVMAWGLDIIIHIA 160
FH + + AN+ A+P+++ +++P L +LL + ++ + + + + +
Sbjct: 377 FHGVSTVSVAANLFAVPLVTLLIVPLILTGMLLHLTGPAIVEFGVWQITDALMAGLFWLL 436
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
H + + T +++ T G++ I +T
Sbjct: 437 HHLPAGWLNVDARGLWLTLLPWLLIAVWRFHAWATAPALWGTLCILLTFPFWRFTVGHPW 496
Query: 221 PDLLISEKGNLVALVDKNTLISNYSNP 247
++ L ++++N Y
Sbjct: 497 RVTMLDVGQGLAMVIERNGRAILYDTG 523
>gi|307824110|ref|ZP_07654337.1| DNA internalization-related competence protein ComEC/Rec2
[Methylobacter tundripaludum SV96]
gi|307734894|gb|EFO05744.1| DNA internalization-related competence protein ComEC/Rec2
[Methylobacter tundripaludum SV96]
Length = 777
Score = 39.4 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 73/183 (39%), Gaps = 11/183 (6%)
Query: 77 KQSFLNEIRANIGTYGSASAS--IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI 134
+ L + I G S L+ F + + +AN++A+P++S +V+P L+A+
Sbjct: 376 RLGKLGPVWGAIKINGVTSVGLSPLLLLFFQQVSLIAPLANLIAVPVISLLVVPLSLLAV 435
Query: 135 LLMIL--SLDNIPFGVMA---WGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL 189
++M + +L + F ++ GL ++ AH + + + V LL
Sbjct: 436 IIMFILPTLASKLFFLVDTVLQGLWWLL--AHLAEIPMASINHALPSYWALLFAVPGILL 493
Query: 190 MVFCKT-NIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGN-LVALVDKNTLISNYSNP 247
++ R + ++ + P + ++ + + G L A+V + Y
Sbjct: 494 LLAPVGIPARWLSLVLFLPLVFTDVKQPEAGDINMTLLDVGQGLSAVVQTTHHLLVYDTG 553
Query: 248 PSF 250
F
Sbjct: 554 AKF 556
>gi|262165991|ref|ZP_06033728.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio mimicus VM223]
gi|262025707|gb|EEY44375.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio mimicus VM223]
Length = 747
Score = 39.4 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 74/183 (40%), Gaps = 12/183 (6%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG-LDI 155
+ F + + ++ N++ IP S V++PA + + L + + + W +D
Sbjct: 371 APVTAYFFGGLSITAVLYNLVFIPWFSVVIVPALFLGLALT---VTIPTWAALYWPRVDW 427
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
++ + IP+ S ++ +++ + + + + ++I+ L+ +
Sbjct: 428 TFLPLDW-ALQFADVGWVVIPQ-SIQGLIAALVVLSLLY-RVMSLRACALSLSIVGLWWW 484
Query: 216 PYSFSP----DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
S +P D+L G L ++++N Y S+ + +I P + +++
Sbjct: 485 FPSITPLWRMDVLDVGHG-LAIVIEQNDRAIIYDTGSSWSGGSYAQNVIEPILQQRGIRR 543
Query: 272 EDL 274
D
Sbjct: 544 LDG 546
>gi|58337146|ref|YP_193731.1| competence protein [Lactobacillus acidophilus NCFM]
gi|227903722|ref|ZP_04021527.1| competence protein ComEC [Lactobacillus acidophilus ATCC 4796]
gi|58254463|gb|AAV42700.1| competence protein [Lactobacillus acidophilus NCFM]
gi|227868609|gb|EEJ76030.1| competence protein ComEC [Lactobacillus acidophilus ATCC 4796]
Length = 762
Score = 39.4 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 55/135 (40%), Gaps = 10/135 (7%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGV-MAWGLDIIIHIAHR 162
F+ I + ++ N++ +P +++V+P I + ++ D + G + G + +I I
Sbjct: 376 FYQINLLTVLFNMIIVPYFNWIVMPLTFGGIFIWHINKDLVFLGEHILSGGEKLIGI--F 433
Query: 163 ISVAHNEFCIGRIPET-SFVTIVVEFLLMVFCKTNIRH------IGSIMIGITIIILFTF 215
G+I S + +++ L ++ K + +G I++GI I
Sbjct: 434 SQSKLGLVIFGQIEWWQSLILLIITGLFIITLKEKPKWKIDSKKLGIILLGIYTIFFSLI 493
Query: 216 PYSFSPDLLISEKGN 230
+ + + G
Sbjct: 494 HFPLRGQVTFIDVGQ 508
>gi|326559532|gb|EGE09946.1| competence protein ComEC [Moraxella catarrhalis 7169]
gi|326567785|gb|EGE17891.1| competence protein ComEC [Moraxella catarrhalis BC1]
Length = 841
Score = 39.4 bits (90), Expect = 0.91, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL-DIIIHIAHR 162
F + ++GL+ N+ AI + FVV+P LIA + + + WG +++ H
Sbjct: 484 FGKVSIWGLVVNLFAIGLFGFVVVPINLIAGAV--FGI-LPELSQLLWGTSSAVLYWLHD 540
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
IG + + + L+ F + + +++ + II+
Sbjct: 541 FLYFGLSSQIGSLGAWLYAPFGMAGFLLSFMVVGLWILPNVLPRVLIILPLVA 593
>gi|83645476|ref|YP_433911.1| DNA internalization-related competence protein ComEC/Rec2 [Hahella
chejuensis KCTC 2396]
gi|83633519|gb|ABC29486.1| DNA internalization-related competence protein ComEC/Rec2 [Hahella
chejuensis KCTC 2396]
Length = 774
Score = 39.4 bits (90), Expect = 0.91, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 63/186 (33%), Gaps = 12/186 (6%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM---ILSLDNIPFGVMAWGL 153
+ FL F IP +AN++A P+++ +V+P GL+A+++ + + + L
Sbjct: 393 AGFLAISFQQIPSSAPLANLIATPLITLIVVPLGLLALVVGLVWPSGGE-VLLRMTDVCL 451
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
D +A S+ S I V + +G+ ++
Sbjct: 452 DGFWRVAEMASLGPILQAPLEATLASVGFIFVGICTAAAMRAP---GAVWFVGLLALLGM 508
Query: 214 TFPYSFSPDL----LISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHV 269
P L+ L ++++ Y P F+ W + V
Sbjct: 509 GMREQDEPVWFRYTLLDVGQGLASVIESRGETVLYDAGPGFV-DGWSAGEAVVGPYLRSV 567
Query: 270 QKEDLQ 275
E L+
Sbjct: 568 GVEGLK 573
>gi|317505312|ref|ZP_07963240.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
gi|315663526|gb|EFV03265.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
Length = 505
Score = 39.4 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 53/148 (35%), Gaps = 23/148 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIP-KMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYG 92
L+D +F + ++ I Y +Y + W W I ++
Sbjct: 345 LWDISFQLSFMAVAGILIAYKPLFYAVYPTNCLLRWAW-----------GMICISLS--A 391
Query: 93 SASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWG 152
L+ +F Y L+ N + IP + ++ L+A + M++ W
Sbjct: 392 QMLTFPLLLHYFGNFATYFLLTNFIVIPAATAILY-LALLAFVSMLI----PALQT--WI 444
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSF 180
++++ IA ++ A I +P +
Sbjct: 445 INLMTMIAGWMNTA--VTTISHLPYAAI 470
>gi|301347996|ref|ZP_07228737.1| DNA internalization-related competence protein ComEC/Rec2
[Acinetobacter baumannii AB056]
Length = 525
Score = 39.4 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 30/227 (13%), Positives = 76/227 (33%), Gaps = 29/227 (12%)
Query: 9 DPFPAETTIEGIARLSPPSGP--AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
P T + A L P F ++ + + I +P+ + S S
Sbjct: 61 QPIKPFTLLVYSASLLLLMDPFSVLSAGFWLSYGACFILIRIYQTIAQLPEQHFLSLSSK 120
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
F++++ + S + F I + NI+A+PI+ V+
Sbjct: 121 MI-----------FMSKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPIVGSVI 169
Query: 127 IPAGLIAILL---------MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
+P ++A M+ +++ ++ L ++ ++ + +
Sbjct: 170 VPLNIMAACAWFVIKPFGNMLFHFNDMLLSILLSYLGLLEKLSLTLQGIS-------LTP 222
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLL 224
S + I +++ K + I+ + ++I+ ++L
Sbjct: 223 LSLLAISCAIIILFLPKGILPKTWGILCCLPLVIMNKTSQQIQLNIL 269
>gi|294665030|ref|ZP_06730337.1| competence protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
gi|292605187|gb|EFF48531.1| competence protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 10535]
Length = 848
Score = 39.4 bits (90), Expect = 0.97, Method: Composition-based stats.
Identities = 16/113 (14%), Positives = 41/113 (36%), Gaps = 7/113 (6%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNI 144
+ T + + F + G AN++AIP +FVV+P L+ L +
Sbjct: 401 SAQTVATVGLLPLTVSLFGQASLVGPFANVVAIPWWTFVVVPLCLLGTALEAIYPGTGVW 460
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP---ETSFVTIVVEFLLMVFCK 194
+ + W + + + + + +P + + ++ ++ +
Sbjct: 461 AWQLAGWCFE--LTWPGFVWLGQTAVALWWVPESDGVALIAALLGAFWLLLPR 511
>gi|163857073|ref|YP_001631371.1| DNA internalization-related competence protein ComEC/Rec2
[Bordetella petrii DSM 12804]
gi|163260801|emb|CAP43103.1| DNA internalization-related competence protein ComEC/Rec2
[Bordetella petrii]
Length = 843
Score = 39.4 bits (90), Expect = 0.97, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 42/130 (32%), Gaps = 6/130 (4%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI---LSLDNI 144
+ + L H + + +AN AIPI+SF+V P L+ L +
Sbjct: 434 VQMAVTLGLVPLLAHLMHQVSLGSPLANAFAIPIVSFIVTPLALLCAAFGAVPGLGMLAR 493
Query: 145 PFGVMAWGL-DIIIHIAHRISVAHN-EFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIG 201
GV+ + D + I AH + P V + R G
Sbjct: 494 ACGVLGHAVFDWTMVPVSWIGSAHWAAVDVAAAPWPLLALAVAGVAWALQPPGWPARGAG 553
Query: 202 SIMIGITIII 211
+++ +
Sbjct: 554 WLLMLPMLCW 563
>gi|126173913|ref|YP_001050062.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella baltica OS155]
gi|125997118|gb|ABN61193.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella baltica OS155]
Length = 783
Score = 39.4 bits (90), Expect = 0.97, Method: Composition-based stats.
Identities = 32/233 (13%), Positives = 69/233 (29%), Gaps = 30/233 (12%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + + I Y I ++ S + + + +G +A
Sbjct: 325 FWLSFCALGIILYTLEIQPRAFTPASTRRARLRTGMMQFWAIQWRLSLGLGLLQAAL--- 381
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F + V+ L NILA+P SFVVIP + + L + ++
Sbjct: 382 -----FGGVSVHSLWMNILAVPWFSFVVIPLAMAGFVCWWLG-TALGLSHFGLSSLGVLR 435
Query: 159 IAHRISVAHNEF------CIGRIPETSFVTIVVEFLLM---VFCK---------TNIRHI 200
++ + + S + + F + V + + +
Sbjct: 436 LSDWSLSPYAQLLDISQQLPAHWLALSDSLLALGFCALVGGVLWRYVPKHKHYIAWLSLL 495
Query: 201 GSIMIGITIIILFTFPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSF 250
+ I + + + + L+ L +++KN Y +F
Sbjct: 496 SLLFIPALLFCMTLWSPVQTHRWTMHLLDVGQGLTVVIEKNGRGFIYDTGAAF 548
>gi|296122721|ref|YP_003630499.1| ComEC/Rec2-related protein [Planctomyces limnophilus DSM 3776]
gi|296015061|gb|ADG68300.1| ComEC/Rec2-related protein [Planctomyces limnophilus DSM 3776]
Length = 879
Score = 39.4 bits (90), Expect = 1.00, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 69/194 (35%), Gaps = 9/194 (4%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSS--ESHNTWTWKKISSIK-QSFLNEIRANIGT 90
F +F + + + P++I S + W+ I + + L ++
Sbjct: 429 GFQLSFLAVATLL-IVARTMGKPQVIQSQSEGAMAASGWRAIRGHRWLAILWQLMIATFV 487
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-GVM 149
+ + I GLI NI P++ ++ + +L MI IP G+
Sbjct: 488 IWCLTTPLIAATS-GVISPVGLILNIALAPLVPIILWSGYITLLLGMIHPWLAIPSGGIF 546
Query: 150 AWGLDIIIHIAHRISVA-HNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGIT 208
W L +I + + + + F + +P + M+ + + + + +G+
Sbjct: 547 DWSLYWLIDVVDQAAGWRYGHFVLSPLPVEYALIFYSAVAGMLLFRVHRVRVVMLTLGLG 606
Query: 209 IIILFT--FPYSFS 220
+I L +P
Sbjct: 607 VIWLAVGYWPQERP 620
>gi|24374338|ref|NP_718381.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella oneidensis MR-1]
gi|24348890|gb|AAN55825.1|AE015719_7 DNA internalization-related competence protein ComEC/Rec2
[Shewanella oneidensis MR-1]
Length = 769
Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 37/233 (15%), Positives = 78/233 (33%), Gaps = 33/233 (14%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + ++ I Y ++ S +S+ T ++Q I+ + +I
Sbjct: 321 FWLSFSALAIILYTLESAQVARSIDSNQTLFATSCVRLRQ--FWAIQWRLSLILGLVQAI 378
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL------------LMILSLDNIPF 146
F F + ++ L N+L +P S +VIP ++A L ++ L ++
Sbjct: 379 F----FGGVSIHSLWMNMLVVPWFSLLVIPLSMLAFLVWWLGELFGQSWMVPFQLADLSL 434
Query: 147 GVMAWGLDIIIHI-AHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRH-----I 200
L++ + H SV+ + ++ L
Sbjct: 435 MPFGKLLEVSDELPGHWHSVSDG------MLALCLCVLLALTLWRYMPHRRQYWQWHLMA 488
Query: 201 GSIMIGITIIILFTFPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSF 250
G + + + I + + L+ L A+V+K+T Y +F
Sbjct: 489 GLLCVPMAIFVFQRIAQVETAQWTLHLLDVGQGLAAVVEKDTRALVYDTGAAF 541
>gi|317050950|ref|YP_004112066.1| ComEC/Rec2-like protein [Desulfurispirillum indicum S5]
gi|316946034|gb|ADU65510.1| ComEC/Rec2-related protein [Desulfurispirillum indicum S5]
Length = 451
Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 16/118 (13%), Positives = 38/118 (32%), Gaps = 18/118 (15%)
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
++ HF + + + N+ A+P+ S ++ L +L L +D + W L
Sbjct: 268 FASLPITAWHFGYVNLLSALVNLAAVPVFSALLYSFFLHLLLPAALIID-PLHTALGW-L 325
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT----NIRHIGSIMIGI 207
+ + + R S + I L + + + + +
Sbjct: 326 NQVTWV-----------VPVRFSTISTLLI-FGLLTAALWRKVHPYRPALLALLPVAV 371
>gi|91203378|emb|CAJ71031.1| similar to sec independent translocase tatC [Candidatus Kuenenia
stuttgartiensis]
Length = 446
Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 12/157 (7%)
Query: 98 IFLIKHFHCIPVYGLIAN--ILAIPILSFVVIPAGLIAI-LLMILSLDNIPFGVMAWGLD 154
I+ F +Y ++ P+ + GL LL+ L + ++ G+
Sbjct: 100 IYQAWRFVSAGLYAKEKRYILVFFPVSYIAFVMGGLFGYYLLIPFGLQFLI-SILGPGIQ 158
Query: 155 IIIHIAHRIS-VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
II + +S V +G + + V +++ + V I+ ++ I II
Sbjct: 159 PIITMQQYVSFVFLLTVALGLVFQLPLVMLLLSKIGFVSADNFIKWRKYSILVIFIIAAI 218
Query: 214 TFP-------YSFSPDLLISEKGNLVALVDKNTLISN 243
P + +P +L+ E G LVA K I
Sbjct: 219 VTPPDPFTQTMTAAPMILLYELGILVAKPTKKGFILL 255
>gi|34495926|ref|NP_900141.1| competence protein [Chromobacterium violaceum ATCC 12472]
gi|34330273|gb|AAQ58149.2| competence protein [Chromobacterium violaceum ATCC 12472]
Length = 704
Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 34/94 (36%), Gaps = 5/94 (5%)
Query: 101 IKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIA 160
F P+ +AN LAIP +S ++ P L+A+ L + AW + +
Sbjct: 333 AAMFGGFPLLSPLANALAIPYVSVLLTPLSLLAVALPWDG----GLQLAAWLVRGFYWLV 388
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
++ + + P + ++ +
Sbjct: 389 EALA-RGPAWHVAGTPWPLLALAAAGSVWLIAPR 421
>gi|229198453|ref|ZP_04325157.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus m1293]
gi|228584956|gb|EEK43070.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
cereus m1293]
Length = 663
Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
I ++ L+ HF Y + NIL +P LS VV+
Sbjct: 248 ISLISQLVSTPILLYHFGYFSPYSIFLNILYVPFLSLVVL 287
>gi|295706660|ref|YP_003599735.1| ComE operon protein [Bacillus megaterium DSM 319]
gi|37650596|emb|CAD69020.1| ComEC protein [Bacillus megaterium]
gi|294804319|gb|ADF41385.1| ComE operon protein [Bacillus megaterium DSM 319]
Length = 763
Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 22/191 (11%), Positives = 63/191 (32%), Gaps = 11/191 (5%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F F + + S + + + SF + + S+
Sbjct: 310 FAFIAMLLFKPYYLFDVGFQLSFAVSFALILSSQTILPRFHSSFSQLMV--VSAIAQVSS 367
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI---LLMILSLDNIPFGVMAWGL 153
L+ +F+ + + L N++ +P+ S V++P L+ + +L+ + + ++ L
Sbjct: 368 LPLLLYYFYGVSLLSLPLNMVFVPLFSLVILPLCLLILFVRILLP-GVSELLEQILHVLL 426
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVT---IVVEFLLMVFCKTNIRHIGSIMIGITII 210
+ +F G+ P + + L + + + + + + ++
Sbjct: 427 LFCEKLLGFFEWIPADFVTGK-PHIVLFLGMYLCIYALFVALEEGEF-FVRYMFLLVALL 484
Query: 211 ILFTFPYSFSP 221
+P
Sbjct: 485 AAQCMYPYLNP 495
>gi|329957240|ref|ZP_08297760.1| ComEC/Rec2-like protein [Bacteroides clarus YIT 12056]
gi|328522953|gb|EGF50056.1| ComEC/Rec2-like protein [Bacteroides clarus YIT 12056]
Length = 684
Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 49/137 (35%), Gaps = 14/137 (10%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD F + ++AI P + NT K + I S +I
Sbjct: 342 LFDVGFQLSFAAVTAI--LLLQPGLYGLLPVKNTALRKVWALITVSIAAQI--------- 390
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWG 152
+ ++ +F + L+ N+ IP++S +V A ++ + L SL + +
Sbjct: 391 -GTAPLVMLYFSRFSTHFLLTNLWVIPLVSLIVY-ATVVLLALTPFPSLQHFFAEMTEML 448
Query: 153 LDIIIHIAHRISVAHNE 169
+ + + I
Sbjct: 449 IRLQNTVLRWIEQLPLA 465
>gi|257454428|ref|ZP_05619690.1| putative competence protein, ComEC [Enhydrobacter aerosaccus SK60]
gi|257448194|gb|EEV23175.1| putative competence protein, ComEC [Enhydrobacter aerosaccus SK60]
Length = 953
Score = 39.4 bits (90), Expect = 1.0, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL--MILSLDNI--PFGVM 149
++ F + V G++ N+LA+P L VV+P ++A ++ + + D + M
Sbjct: 534 PIVVWFFGKVSVIGILVNLLAVPFLGLVVVPLDMLAGVVSWLPVVGDWLSQIIWSM 589
>gi|294624867|ref|ZP_06703524.1| competence protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
gi|292600826|gb|EFF44906.1| competence protein [Xanthomonas fuscans subsp. aurantifolii str.
ICPB 11122]
Length = 848
Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 15/114 (13%), Positives = 39/114 (34%), Gaps = 9/114 (7%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNI 144
+ T + + F + G AN++AIP +FVV+P L+ L +
Sbjct: 401 SAQTVATVGLLPLTVSLFGQASLVGPFANVVAIPWWTFVVVPLCLLGTALEAIYPGTGVW 460
Query: 145 PFGVMAWGLDII----IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
+ + W ++ + + + + + ++ ++ +
Sbjct: 461 AWQLAGWCFELTWPGFVWLGQTAVALWW---VPESDGVALIAALLGAFWLLLPR 511
>gi|108800478|ref|YP_640675.1| ComEC/Rec2-related protein [Mycobacterium sp. MCS]
gi|119869616|ref|YP_939568.1| ComEC/Rec2-related protein [Mycobacterium sp. KMS]
gi|108770897|gb|ABG09619.1| ComEC/Rec2-related protein [Mycobacterium sp. MCS]
gi|119695705|gb|ABL92778.1| ComEC/Rec2-related protein [Mycobacterium sp. KMS]
Length = 268
Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 14/171 (8%), Positives = 45/171 (26%), Gaps = 3/171 (1%)
Query: 50 GYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV 109
G+ S+ W+ + + + + + + + +
Sbjct: 91 GFALSVAATAGLVVIAPVWSRRLTGRGWPKPVADAV-GVAMAAQLVTAPLVAGISGRVSL 149
Query: 110 YGLIANILAIPILS-FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
++ANI+ P++ VI A+ + + + L ++ +A +
Sbjct: 150 VSVLANIVVAPVIPPITVIGTAAAALCWLWPAGAGLLIRFTGPPLWWLLRVADWAAAVPG 209
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
+ + +V R + + ++
Sbjct: 210 ASVPVPSGWAGVGLVAAGGIALVVL-WRWRWVRLAAGAAVLGLVAWSASGH 259
>gi|256027140|ref|ZP_05440974.1| COME operon protein 3 [Fusobacterium sp. D11]
gi|289765121|ref|ZP_06524499.1| COME operon protein 3 [Fusobacterium sp. D11]
gi|289716676|gb|EFD80688.1| COME operon protein 3 [Fusobacterium sp. D11]
Length = 396
Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ +F+ I +I+N++ +P+ SF +I IA+ L L + ++ I+I
Sbjct: 292 PITVYYFNTIQFLSVISNLILLPLASFYII-VNYIALFLENFYLSFLLKPIVEILYKILI 350
Query: 158 HIAHRISVAH 167
++ S
Sbjct: 351 YLIDFFSELP 360
>gi|237743580|ref|ZP_04574061.1| COME operon protein 3 [Fusobacterium sp. 7_1]
gi|260497928|ref|ZP_05816046.1| COME operon protein 3 [Fusobacterium sp. 3_1_33]
gi|229433359|gb|EEO43571.1| COME operon protein 3 [Fusobacterium sp. 7_1]
gi|260196543|gb|EEW94072.1| COME operon protein 3 [Fusobacterium sp. 3_1_33]
Length = 396
Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ +F+ I +I+N++ +P+ SF +I IA+ L L + ++ I+I
Sbjct: 292 PITVYYFNTIQFLSVISNLILLPLASFYII-VNYIALFLENFYLSFLLKPIVEILYKILI 350
Query: 158 HIAHRISVAH 167
++ S
Sbjct: 351 YLIDFFSELP 360
>gi|238019267|ref|ZP_04599693.1| hypothetical protein VEIDISOL_01131 [Veillonella dispar ATCC 17748]
gi|237863966|gb|EEP65256.1| hypothetical protein VEIDISOL_01131 [Veillonella dispar ATCC 17748]
Length = 740
Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 69/178 (38%), Gaps = 17/178 (9%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
FD +F + G + + W IK + + A +
Sbjct: 411 FDVSFQLSFGAT--YGLLIWGKVLYERIQWLPKW-------IKTPLVLCVSAQLLIL--- 458
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
+ +FH I + L+A + P+L ++ + ++ +L + + + ++ L
Sbjct: 459 ---PLQLYYFHYISIASLLAACIVAPLLDLSIVLIFISTVISYVLPISFL-WSLIDVLLR 514
Query: 155 IIIHIAHRISVAHNEFCIGRI-PETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
I +++ H + + + +G + P +++ +V+ L F R+ I++ + ++
Sbjct: 515 ISLYLNHVLGRSGSLLWLGMMNPYCAYLYLVLLGLFTYFLTHRKRYTVYIVLCLVFMV 572
>gi|320333379|ref|YP_004170090.1| DNA internalization-like competence protein ComEC/Rec2 [Deinococcus
maricopensis DSM 21211]
gi|319754668|gb|ADV66425.1| DNA internalization-related competence protein ComEC/Rec2
[Deinococcus maricopensis DSM 21211]
Length = 743
Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 7/126 (5%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ F +P+ GL AN++A I+ +V P G +A LL L++ + ++ D ++
Sbjct: 381 PVVAHTFGTVPLVGLPANLVAELIMGALV-PLGFLAGLLGPLAV--VVNPLVGVLADALL 437
Query: 158 HIAHRISVAHNE--FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+A A + ++ + +L V +R + + + +
Sbjct: 438 AVAQAAGRAPVLTWGNVSAAGFAAYGVFALAGVLAVL--GRVRPPAFLAVAGVLALGTLL 495
Query: 216 PYSFSP 221
P SP
Sbjct: 496 PAHLSP 501
>gi|158335299|ref|YP_001516471.1| competence protein [Acaryochloris marina MBIC11017]
gi|158305540|gb|ABW27157.1| competence protein, putative [Acaryochloris marina MBIC11017]
Length = 757
Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 34/220 (15%), Positives = 78/220 (35%), Gaps = 34/220 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + I ++P + W ISS+ + + +
Sbjct: 352 GFQLSFLATLGLI------VTVPPLTQ----KLDWLPPAISSLFAVPIAAMLWTL----- 396
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWG 152
+ F P+Y L+ANI P+L + I+ ++ + ++A
Sbjct: 397 ----PLQLYQFGIAPIYCLLANICTTPLLILLTAGGFCSGIVAVMWPLAGGLLAWLLAIP 452
Query: 153 LDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFL---LMVFCKTNIRHIGSIMIGIT 208
+I + +IS+ +G + V + + L+ K + + ++ +GI
Sbjct: 453 TQGLIWLVTQISLLPGASLTLGTLSIWQLVLLYGLLVSAWLLPVWKQRLPLLITLALGII 512
Query: 209 IIILF----------TFPYSFSPDLLISEKGNLVALVDKN 238
I+ ++ F + P ++I + G+ + L +
Sbjct: 513 ILPIWHYQVYRFQITIFDRATPPMMVIQQPGSTLVLNSGD 552
>gi|253570298|ref|ZP_04847707.1| competence protein [Bacteroides sp. 1_1_6]
gi|298384888|ref|ZP_06994447.1| competence protein [Bacteroides sp. 1_1_14]
gi|251840679|gb|EES68761.1| competence protein [Bacteroides sp. 1_1_6]
gi|298262032|gb|EFI04897.1| competence protein [Bacteroides sp. 1_1_14]
Length = 700
Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 36/94 (38%), Gaps = 4/94 (4%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
++ + ++ +F + L+ N++ IP+++ + A ++ +LL L
Sbjct: 399 SVSIAAQIGTAPLVMLYFSHFSTHFLLTNLVVIPLVTVTLY-AAVLMLLLTPL---PAVQ 454
Query: 147 GVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
VMA + ++ + + + +
Sbjct: 455 FVMAGAVRFLLKVLNDFVRWVEQLPYASLDGIWL 488
>gi|45441026|ref|NP_992565.1| hypothetical protein YP_1199 [Yersinia pestis biovar Microtus str.
91001]
gi|45435885|gb|AAS61442.1| putative membrane protein [Yersinia pestis biovar Microtus str.
91001]
Length = 763
Score = 39.4 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 47/120 (39%), Gaps = 8/120 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIP-AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
FH I ++ + AN+ A+PI+S +P L L ++ ++ +I + + L +++
Sbjct: 389 FHGISLFSIPANLWAVPIVSLFTVPCVLLALALALLPAVADIFWFLADISLTVVLF---- 444
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
N+ G + + + + S +G+ ++ + + D
Sbjct: 445 ---PLNQLKEGWLHTGMASVAIGYGGWLALFIWRFQWWRSHPLGVIVLCMNMVLLTQRSD 501
>gi|301512408|ref|ZP_07237645.1| DNA internalization-related competence protein ComEC/Rec2
[Acinetobacter baumannii AB058]
Length = 573
Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 30/227 (13%), Positives = 76/227 (33%), Gaps = 29/227 (12%)
Query: 9 DPFPAETTIEGIARLSPPSGP--AFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHN 66
P T + A L P F ++ + + I +P+ + S S
Sbjct: 109 QPIKPFTLLVYSASLLLLMDPFSVLSAGFWLSYGACFILIRIYQTIAQLPEQHFLSLSSK 168
Query: 67 TWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
F++++ + S + F I + NI+A+PI+ V+
Sbjct: 169 MI-----------FMSKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPIVGSVI 217
Query: 127 IPAGLIAILL---------MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
+P ++A M+ +++ ++ L ++ ++ + +
Sbjct: 218 VPLNIMAACAWFVIKPFGNMLFHFNDMLLSILLSYLGLLEKLSLTLQGIS-------LTP 270
Query: 178 TSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLL 224
S + I +++ K + I+ + ++I+ ++L
Sbjct: 271 LSLLAISCAIIILFLPKGILPKTWGILCCLPLVIMNKTSQQIQLNIL 317
>gi|302335766|ref|YP_003800973.1| DNA internalization-related competence protein ComEC/Rec2
[Olsenella uli DSM 7084]
gi|301319606|gb|ADK68093.1| DNA internalization-related competence protein ComEC/Rec2
[Olsenella uli DSM 7084]
Length = 798
Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 33/260 (12%), Positives = 82/260 (31%), Gaps = 12/260 (4%)
Query: 51 YFYSIPKMIYSSESHNTWTWKKISSIKQSF--LNEIRANIGTYGSASASIFLIKHFHCIP 108
Y++ ++ W ++ ++F +I A + I F
Sbjct: 365 AAYALRALLPRRPQSVPWRLPCGRALSRAFDAFADITAATLVAQVVTLPIVGPA-FGSFA 423
Query: 109 VYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
+ +AN++ P+ ++ AGL+A + + + V + R+S
Sbjct: 424 LVSTVANLVLGPLFELLIT-AGLLACVAPLAPVRVGALLVCDGSGSLAADAVRRMSRIPL 482
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCK------TNIRHIGSIMIGITIIILFTFPYSFSPD 222
+P +VV ++ + +R + ++L + P
Sbjct: 483 ASLRVDVPGWVLWLVVVTASALLVWRWPKVNPRKVRIALGGAAAVLSVLLVRWALFAPPS 542
Query: 223 LLISEKGNLVALVDKNT--LISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQS 280
+ I + G A++ ++ + S P + + + D S
Sbjct: 543 VRILDVGQGDAILVQDGPSAVLVDSGPDERVADELARLHVFRLDAVVLTHLHDDHYGGLS 602
Query: 281 SLKEILRSMQPRKFLCIKKS 300
SL ++R + +++
Sbjct: 603 SLCGVVRCDRVIVARGVREH 622
>gi|163848173|ref|YP_001636217.1| ComEC/Rec2-like protein [Chloroflexus aurantiacus J-10-fl]
gi|222526078|ref|YP_002570549.1| ComEC/Rec2-like protein [Chloroflexus sp. Y-400-fl]
gi|163669462|gb|ABY35828.1| ComEC/Rec2-related protein [Chloroflexus aurantiacus J-10-fl]
gi|222449957|gb|ACM54223.1| ComEC/Rec2-related protein [Chloroflexus sp. Y-400-fl]
Length = 504
Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 53/131 (40%), Gaps = 15/131 (11%)
Query: 73 ISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV---IPA 129
+ +++++ + A + T ++ HF + + +ANI+ +P++ F + A
Sbjct: 370 VDAMREALGATLAAQVLTL------PLMLYHFGNLSLIAPLANIVIVPVVPFAMLLGGCA 423
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL 189
L ++ + L + L I +A ++ + + R+P +VV +
Sbjct: 424 LLGGLVWLPLG-QWLALCAW-LPLSWINSVAMLLA--EPAWAVVRLPVFPLWLLVV--MY 477
Query: 190 MVFCKTNIRHI 200
+V R +
Sbjct: 478 VVIASVWWRWV 488
>gi|152984486|ref|YP_001347549.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas aeruginosa PA7]
gi|150959644|gb|ABR81669.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas aeruginosa PA7]
Length = 740
Score = 39.0 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISV 165
+ + G +AN+LA+P + +V+P L LL+ + + + LD + H+ ++
Sbjct: 378 LSLSGALANLLAVPWVEMLVVPPALAGSLLLGVPGVGESLLWIAGASLDQLFHLLVLLAG 437
Query: 166 AHNEFCIGRIPETSFVTIVVE-FLLMV 191
+ ++ +
Sbjct: 438 LAGAWQPPAATAWGVALGMLGALCWLA 464
>gi|91225264|ref|ZP_01260432.1| Rec2-related protein [Vibrio alginolyticus 12G01]
gi|91189903|gb|EAS76175.1| Rec2-related protein [Vibrio alginolyticus 12G01]
Length = 751
Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 31/233 (13%), Positives = 78/233 (33%), Gaps = 23/233 (9%)
Query: 72 KISSIKQSFLNEIRANIGTYGSASA--SIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
I + + ++A + T SA F + + N++ IP F+V+P
Sbjct: 348 LIRHQRGGWKARLKALLLTQLMLSALIVPVSGHFFSGFSLSSIAYNLVFIPWFGFIVVPL 407
Query: 130 GLIAILLMIL--SLDNIPFGVMAWGLDII-IHIAHRISVAHNEFCIGRIPETSFVTIVVE 186
+A+ + + + ++ W L + I + + + +V+
Sbjct: 408 MFLALFSSLFLEMIAKPLWHLVDWSLQPLSTSIQYAVGSWQSI-------SMEMTMLVMA 460
Query: 187 FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSP----DLLISEKGNLVALVDKNTLIS 242
++ + + + H ++ + I+I + P D+L G V + + ++
Sbjct: 461 IVVCLIFQRFMSHYAWYLL-LGIVISIKLASKYEPRWRIDVLDVGHGLAVVVEKDDKVLL 519
Query: 243 NYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFL 295
+ W+S I P + + + + L +F+
Sbjct: 520 YDTG------KAWQSGSIAEQVVTPVLHQRGYESIDTLILSHSDNDHAGGRFV 566
>gi|83718537|ref|YP_442420.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia thailandensis E264]
gi|257138623|ref|ZP_05586885.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia thailandensis E264]
gi|83652362|gb|ABC36425.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia thailandensis E264]
Length = 845
Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 30/240 (12%), Positives = 63/240 (26%), Gaps = 17/240 (7%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
A + + + F IP+ G +AN AIP + +V P L ++L LD
Sbjct: 445 ARAQFAVTIALAPLTALWFAQIPLTGPLANAFAIPWVGSLVTPIVLAGVVL-PAPLDAPA 503
Query: 146 FGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIM 204
+ + + ++ + A + + + T + + +
Sbjct: 504 YVLGEALVAALMRFLEAAAGAGRTVWMLPVPGGFALATAAAGVVWALTPRGW-------P 556
Query: 205 IGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFH 264
+ + + +P L L AL + AL+
Sbjct: 557 LRGAAPLAWLPLVVPAPLALPDGTFRLTALDVGQGSAVL--------IETARHALLFDAG 608
Query: 265 EAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLS 324
P + +R + G + V + + S
Sbjct: 609 PGPEASNAGERVVVPFLRARGVRMLDTLVVSHADSDHAGGAPAVLEAITVAQVTGGLPPS 668
>gi|320103931|ref|YP_004179522.1| ComEC/Rec2-like protein [Isosphaera pallida ATCC 43644]
gi|319751213|gb|ADV62973.1| ComEC/Rec2-related protein [Isosphaera pallida ATCC 43644]
Length = 1320
Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 31/219 (14%), Positives = 78/219 (35%), Gaps = 23/219 (10%)
Query: 54 SIPKMIYSSESHNTWTWKKISSIKQSFLNEI--RANIGTYGSASASIFLIKHFHCIPVYG 111
+ + + E + ++++ I + + ++ F+ + G
Sbjct: 467 TPSEALDRLERQLKRLGSRKAALQDRIATTIGQAIGVSITAWIFTAPLVVDRFNLVTPIG 526
Query: 112 LIANILAIPILSFVVIPAGL-IAILLMILSLDNIPFGVMAWGLDIIIHIAHR-ISVAHNE 169
+ N+ +P+ V AG +++ + +L ++ V LD++I +A ++
Sbjct: 527 IPLNLPMVPLSGVAVASAGATLSLGAIHPALGDLAGMVCRVSLDLLIWLASLGETLPGGS 586
Query: 170 FCIGRIP-ETSFVTIVVEFLLMVFCKTNI-------------RHIGSIMIGITIIILFTF 215
+ P + V +V+ + + I IG+ + G+ + +
Sbjct: 587 WHTPAPPTAWTSVVLVLAMIALALEARRIDRDSDRCRNVRRVAWIGASLGGVLWMSWWAL 646
Query: 216 PYSFS---PDLLISEK--GNLVALVDKNTLISNYSNPPS 249
P S++ P LI + G+ V +V + Y
Sbjct: 647 PASWTVCGPKALILDVGLGSAVVVVSADGRAMLYDCGSD 685
>gi|70729159|ref|YP_258895.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas fluorescens Pf-5]
gi|68343458|gb|AAY91064.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas fluorescens Pf-5]
Length = 743
Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISV 165
I + G +AN+LA+P +SF+V+P L+ LL+ + + + LD + + I+
Sbjct: 376 ISLSGPLANLLAVPWISFLVLPPALLGSLLLPVPYVGEGLLWLAGGLLDGLFRLLGLIAG 435
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITI 209
+ +IP + + LL++ + +R +G ++ + +
Sbjct: 436 GWPAWVPPQIPLWLWGMNALGCLLLLLPRGVPMRVLGWPLLLLAV 480
>gi|188997184|ref|YP_001931435.1| ComEC/Rec2-related protein [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932251|gb|ACD66881.1| ComEC/Rec2-related protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 439
Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 35/106 (33%), Gaps = 6/106 (5%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF- 146
+ + ++ +F + A PI S + P I++L ++ +
Sbjct: 335 SSLFATLFTLPIILYYFGNFSPTTIFA----TPIASLPLYPLLTISVLNLLTGFEISFLV 390
Query: 147 GVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
+M + + I I S F G P + I + L +
Sbjct: 391 KIMDFFTVVFIQIVKFFSSLGLYFT-GFSPSILLIFIYLAILTFIL 435
>gi|315231570|ref|YP_004072006.1| hypothetical protein TERMP_01808 [Thermococcus barophilus MP]
gi|315184598|gb|ADT84783.1| hypothetical protein TERMP_01808 [Thermococcus barophilus MP]
Length = 752
Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 25/150 (16%), Positives = 57/150 (38%), Gaps = 17/150 (11%)
Query: 119 IPILSFVVIPAGLIAILLMILSLDNIPFGVM--AWGLDIIIHIAH------------RIS 164
IP++ V++ G + IL + L ++ G M G+D +H+ + +
Sbjct: 240 IPLIFGVIMTLGFMGILRIPLDIETTTVGAMLVGMGIDYGVHVTNRYYEERKKGRSIEEA 299
Query: 165 VAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYSFSPDL 223
+ G+ + +T + F + +R + +I + + + +P +
Sbjct: 300 AEESIAETGKALLGAALTTIAGFSALSISVLPGLRRLSLALI-MGLGLAALNAVVITPAI 358
Query: 224 LISEKGNLVALVDKNTLISNYSNPPSFIFS 253
+I E+ L L+ + I + FI
Sbjct: 359 IILEED-LRKLITGHYEIPETRSHSGFIAK 387
>gi|224535875|ref|ZP_03676414.1| hypothetical protein BACCELL_00739 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522503|gb|EEF91608.1| hypothetical protein BACCELL_00739 [Bacteroides cellulosilyticus
DSM 14838]
Length = 645
Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 36/95 (37%), Gaps = 6/95 (6%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
+ + +I +F + L+ N+ IP+++ ++ + ++ ++L
Sbjct: 344 TVSVAAQIGTAPLVIFYFSRFSTHFLLTNLWVIPMVTLILY-SAVLMLVLTPF----PFL 398
Query: 147 GV-MAWGLDIIIHIAHRISVAHNEFCIGRIPETSF 180
A G+D ++ +++ E + I
Sbjct: 399 QSGCALGVDALLSAQNKVLCWIEELPMSSIDRLWI 433
>gi|326568703|gb|EGE18773.1| competence protein ComEC [Moraxella catarrhalis BC8]
Length = 842
Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 9/124 (7%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL-DIIIHIAHR 162
F + ++GL+ N+ AI + FVV+P LIA + + + WG +++ H
Sbjct: 485 FGKVSIWGLVVNLFAIGLFGFVVVPINLIAGAV--FGI-LPELSQLLWGTSSAVLYWLHD 541
Query: 163 ISVAHNEFCIGRIPET-----SFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPY 217
IG + V ++ F+++ ++I + ++F
Sbjct: 542 FLYFGLSSQIGSLGAWLYAPFGMVGFLLSFMVVGLWILPNVLPRVLIILPLVAMIFLGLP 601
Query: 218 SFSP 221
P
Sbjct: 602 KQIP 605
>gi|150008325|ref|YP_001303068.1| competence protein [Parabacteroides distasonis ATCC 8503]
gi|298375097|ref|ZP_06985054.1| ComEC/Rec2-related protein [Bacteroides sp. 3_1_19]
gi|149936749|gb|ABR43446.1| competence protein [Parabacteroides distasonis ATCC 8503]
gi|298267597|gb|EFI09253.1| ComEC/Rec2-related protein [Bacteroides sp. 3_1_19]
Length = 428
Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 36/123 (29%), Gaps = 23/123 (18%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
+ ++ +F L N+ P L+A+ L+ + + +
Sbjct: 289 TVSIAAQIGTALLCFYYFGQFSTVFLFTNL-----------PVTLLAMFLIPFAFLWLGY 337
Query: 147 GVMAWGLDI-----------IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
V +G D ++ + SV GR + FL++
Sbjct: 338 PVDFYGYDWIQKIVEGLVHGMVRVVDVFSVMPYATITGRFSFFEMLG-GYGFLVLCLIYM 396
Query: 196 NIR 198
IR
Sbjct: 397 KIR 399
>gi|119478442|ref|ZP_01618427.1| DNA internalization-related competence protein ComEC/Rec2 [marine
gamma proteobacterium HTCC2143]
gi|119448528|gb|EAW29775.1| DNA internalization-related competence protein ComEC/Rec2 [marine
gamma proteobacterium HTCC2143]
Length = 790
Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 6/120 (5%)
Query: 106 CIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP--FGVMAWGLDIIIHIAHRI 163
+ AN+L +P+ SF+++P LI +L + D + + G III +
Sbjct: 396 RASLIAPFANLLLVPLFSFILVPLNLITGILALYDSDTAAQMWSWLDSGFAIIILYLEWL 455
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDL 223
I +P+ + + + G + +I+L P L
Sbjct: 456 ISI-GSQAIIVVPQRPLLIRALAVVGAFVLLLPK---GMPFKWMGVILLLPLFMYRPPQL 511
>gi|255015479|ref|ZP_05287605.1| competence protein [Bacteroides sp. 2_1_7]
Length = 428
Score = 39.0 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 36/123 (29%), Gaps = 23/123 (18%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
+ ++ +F L N+ P L+A+ L+ + + +
Sbjct: 289 TVSIAAQIGTALLCFYYFGQFSTVFLFTNL-----------PVTLLAMFLIPFAFLWLGY 337
Query: 147 GVMAWGLDI-----------IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
V +G D ++ + SV GR + FL++
Sbjct: 338 PVDFYGYDWIQKIVEGLVHGMVRVVDVFSVMPYATITGRFSFFEMLG-GYGFLVLCLIYM 396
Query: 196 NIR 198
IR
Sbjct: 397 KIR 399
>gi|256839388|ref|ZP_05544897.1| competence protein [Parabacteroides sp. D13]
gi|256738318|gb|EEU51643.1| competence protein [Parabacteroides sp. D13]
Length = 428
Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 36/123 (29%), Gaps = 23/123 (18%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
+ ++ +F L N+ P L+A+ L+ + + +
Sbjct: 289 TVSIAAQIGTALLCFYYFGQFSTVFLFTNL-----------PVTLLAMFLIPFAFLWLGY 337
Query: 147 GVMAWGLDI-----------IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
V +G D ++ + SV GR + FL++
Sbjct: 338 PVDFYGYDWIQKIVEGLVHGMVRVVDVFSVMPYATITGRFSFFEMLG-GYGFLVLCLIYM 396
Query: 196 NIR 198
IR
Sbjct: 397 KIR 399
>gi|329767198|ref|ZP_08258725.1| hypothetical protein HMPREF0428_00422 [Gemella haemolysans M341]
gi|328836865|gb|EGF86512.1| hypothetical protein HMPREF0428_00422 [Gemella haemolysans M341]
Length = 641
Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 32/54 (59%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL 141
I + ++ L+ +F+ I +++NI+ +PI S V+ P LI+ ++ ++S+
Sbjct: 353 ISIISTLASVPILLYNFYTIVYISVLSNIVLVPIFSIVLFPLVLISYIIFLISI 406
>gi|320155802|ref|YP_004188181.1| putative hydrolase of the metallo-beta-lactamase superfamily,
clustered with KDO2-Lipid A biosynthesis genes [Vibrio
vulnificus MO6-24/O]
gi|319931114|gb|ADV85978.1| predicted hydrolase of the metallo-beta-lactamase superfamily,
clustered with KDO2-Lipid A biosynthesis genes [Vibrio
vulnificus MO6-24/O]
Length = 629
Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 7/114 (6%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
I + F + + + N L IP S VV+P +A++L +LD +P
Sbjct: 245 IQGMLLLYLAPVTAYFFSGLSLAAWLYNFLFIPWFSLVVVPVIFVALVLT--ALDMMPVA 302
Query: 148 VMAWGL-DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM-VFCKTNIRH 199
M W L D+ + ++ A +G +SF ++V + V + IR
Sbjct: 303 SMLWQLADLSLW---PLTYAMPYAHLGWWGLSSFQVVLVALCALAVMLRHFIRW 353
>gi|94263317|ref|ZP_01287132.1| DNA internalization-related competence protein ComEC/Rec2 [delta
proteobacterium MLMS-1]
gi|93456272|gb|EAT06402.1| DNA internalization-related competence protein ComEC/Rec2 [delta
proteobacterium MLMS-1]
Length = 862
Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 6/92 (6%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ I+ + + + E W ++ + + S L A +
Sbjct: 408 SFQLSFAATAGIITMAPLLQNRYQQLAELEPPRLWLYQLLFWVGASLLASTVATL----- 462
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + HFH + + I +LA P L F
Sbjct: 463 -VTAPLSLHHFHRLSLLSPITTLLATPPLFFW 493
>gi|149278351|ref|ZP_01884488.1| AcrB/AcrD/AcrF family protein [Pedobacter sp. BAL39]
gi|149230721|gb|EDM36103.1| AcrB/AcrD/AcrF family protein [Pedobacter sp. BAL39]
Length = 1021
Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 45/260 (17%), Positives = 81/260 (31%), Gaps = 44/260 (16%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
++ N S I A+G + I E+ + ++ S + I G
Sbjct: 377 GYNINQLSIVGMIVALGIL--VDDSIVVVENIERYLRMGYGKLEASIKATSQIGIAVVGC 434
Query: 94 ASASIFL----------IKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN 143
IF F +I ILA ++S V+P L +I+L +
Sbjct: 435 TVLLIFAFLPIVFLPEGAGDFIRSLPLSVITTILASMVVSLTVVPF-LASIILKPHQSEE 493
Query: 144 --IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIG 201
M G+ H +G+ +V+ + +
Sbjct: 494 GNFLLRAMKKGI-------HTTYGKVLALALGK---PLVTLLVIGGIFL----------- 532
Query: 202 SIMIGITIIILFTFPYSFSPDLLI---SEKGNLVALVDKNTLISNY-----SNPPSFIFS 253
+ + + +I FP S P L+ + +G +A DK T SF +
Sbjct: 533 ASLALVPVIGSSLFPKSEKPMFLVEIETPEGTNIAATDKVTRYVESVLKKVPEISSFASN 592
Query: 254 QWKSALITPFHEAPHVQKED 273
K ++ PH + E+
Sbjct: 593 VGKGNPRIYYNVVPHNESEN 612
>gi|27365417|ref|NP_760945.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
vulnificus CMCP6]
gi|37680542|ref|NP_935151.1| Rec2-related protein [Vibrio vulnificus YJ016]
gi|27361564|gb|AAO10472.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
vulnificus CMCP6]
gi|37199290|dbj|BAC95122.1| Rec2-related protein [Vibrio vulnificus YJ016]
Length = 749
Score = 39.0 bits (89), Expect = 1.4, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 7/114 (6%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
I + F + + + N L IP S VV+P +A++L +LD +P
Sbjct: 365 IQGMLLLYLAPVTAYFFSGLSLAAWLYNFLFIPWFSLVVVPVIFVALVLT--ALDMMPVA 422
Query: 148 VMAWGL-DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM-VFCKTNIRH 199
M W L D+ + ++ A +G +SF ++V + V + IR
Sbjct: 423 SMLWQLADLSLW---PLTYAMPYAHLGWWGLSSFQVVLVALCALAVMLRHFIRW 473
>gi|94271490|ref|ZP_01291961.1| DNA internalization-related competence protein ComEC/Rec2 [delta
proteobacterium MLMS-1]
gi|93450436|gb|EAT01624.1| DNA internalization-related competence protein ComEC/Rec2 [delta
proteobacterium MLMS-1]
Length = 868
Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 6/92 (6%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F++ I+ + + + E W ++ + + S L A +
Sbjct: 414 SFQLSFAATAGIITMAPLLQNRYQQLAELEPPRLWLYQLLFWVGASLLASTVATL----- 468
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
+ + HFH + + I +LA P L F
Sbjct: 469 -VTAPLSLHHFHRLSLLSPITTLLATPPLFFW 499
>gi|153947078|ref|YP_001401543.1| hypothetical protein YpsIP31758_2578 [Yersinia pseudotuberculosis
IP 31758]
gi|152958573|gb|ABS46034.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pseudotuberculosis IP 31758]
Length = 763
Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 47/120 (39%), Gaps = 8/120 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIP-AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
FH I ++ + AN+ A+PI+S +P L L ++ ++ +I + + L +++
Sbjct: 389 FHGISLFSIPANLWAVPIVSLFTVPCVLLALALALLPAVADIFWFLADISLTVVLF---- 444
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
N+ G + + + + S +G+ ++ + + D
Sbjct: 445 ---PLNQLKEGWLHTGMASVAIGYGGWLALFIWRFQWWRSHPLGVIVLCMNMVLLTQRRD 501
>gi|260914323|ref|ZP_05920792.1| recombination protein 2 [Pasteurella dagmatis ATCC 43325]
gi|260631424|gb|EEX49606.1| recombination protein 2 [Pasteurella dagmatis ATCC 43325]
Length = 806
Score = 39.0 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 44/108 (40%), Gaps = 6/108 (5%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
++ + + F I GL AN++A+P+ SF+++P L ++ +
Sbjct: 380 HLQIGLFFLFAPVQLLMFGGISWGGLFANLIAVPLYSFILVPIILFTLVTQNYFITW--- 436
Query: 147 GVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
W ++ I +S ++ +T + + + + ++F +
Sbjct: 437 ---RWANVLVEQITQWLSYLTEQWLQISTWQTYLIIVFLTSIFILFLR 481
>gi|167619426|ref|ZP_02388057.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia thailandensis Bt4]
Length = 845
Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 30/216 (13%), Positives = 70/216 (32%), Gaps = 4/216 (1%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
A + + + F IP+ G +AN AIP + +V P L ++L LD
Sbjct: 445 ARAQFAVTIALAPLTALWFAQIPLTGPLANAFAIPWVGSLVTPIVLAGVVL-PAPLDAPA 503
Query: 146 FGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSI 203
+ + + ++ + A + + + T + + + +R +
Sbjct: 504 YVLGEALVAALMRFLEAAAGAGRTVWMLPVPGGFALATAAAGVVWALTPRGWPLRGAAPL 563
Query: 204 MIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTL-ISNYSNPPSFIFSQWKSALITP 262
++ P + L + G A++ + + P S ++ P
Sbjct: 564 AWLPLVVPAPLAPPDGTFRLTALDVGQGSAVLIETARHALLFDAGPGPEASNAGERVVVP 623
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIK 298
F A V+ D + + + + + +
Sbjct: 624 FLRARGVRMLDTLVVSHADSDHAGGAPAVLEAIAVA 659
>gi|332885335|gb|EGK05586.1| hypothetical protein HMPREF9456_02787 [Dysgonomonas mossii DSM
22836]
Length = 657
Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 23/51 (45%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
+ + + +F P Y +AN++ +P++S ++ AG I M
Sbjct: 384 ALSLVAQLATFPICLYYFGTFPTYFFVANLIIVPVVSLIMYVAGGIVFAKM 434
>gi|240170820|ref|ZP_04749479.1| hypothetical protein MkanA1_16012 [Mycobacterium kansasii ATCC
12478]
Length = 527
Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 54/172 (31%), Gaps = 4/172 (2%)
Query: 50 GYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV 109
G+ S+ W+ + ++ L + A +A + +
Sbjct: 351 GFALSVVATAGLVVIAPLWSRRLVARGLPKPLADALAVAAAAQVVTAPLVAAIS-GRFSL 409
Query: 110 YGLIANILAIPILSFVVIPAGLIAILLMILSLDN-IPFGVMAWGLDIIIHIAHRIS-VAH 167
+ AN+ +++ + + A+L ++ + + ++ +AH + V
Sbjct: 410 VAVFANLAVTAVIAPITVLGSAAALLAVLWPAGAQLLIRFTGPEMWWVLRVAHWAAGVPM 469
Query: 168 NEFCIGRIPETSFVTIVVEFLLMVFCKTNI-RHIGSIMIGITIIILFTFPYS 218
+ P + + V L + + R S + + L + +
Sbjct: 470 ATVPVPEGPAGALLVGGVTVLAVALWRFRWFRLATSWALVAALGCLLAWSLA 521
>gi|219848253|ref|YP_002462686.1| ComEC/Rec2-related protein [Chloroflexus aggregans DSM 9485]
gi|219542512|gb|ACL24250.1| ComEC/Rec2-related protein [Chloroflexus aggregans DSM 9485]
Length = 503
Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 62/164 (37%), Gaps = 9/164 (5%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F +++ F + + E ++++++ + A + T
Sbjct: 332 LWDLGFQLSALATASLFAFGKPMERWLACERWPN--HPVTAAVREALTATLAAQVLTL-- 387
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSF-VVIPAGLIAILLMILSLDNIPFGVMAWG 152
++ HF + + +ANIL +P++ +++ AG + L+ L L +
Sbjct: 388 ----PLMLYHFGNLSLVAPLANILIVPLVPVAMLLSAGALIGGLVWLPLGQWLSPIAWLP 443
Query: 153 LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN 196
L I ++A +S + + +V + + + +
Sbjct: 444 LSWITNVAMILSQPAWAALTVPVFPIWLLWMVYATIALYWLRQR 487
>gi|283470866|emb|CAQ50077.1| DNA internalization-related competence protein ComEC/Rec2
[Staphylococcus aureus subsp. aureus ST398]
Length = 705
Score = 38.6 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 51/119 (42%), Gaps = 15/119 (12%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL-------LMILS 140
I ++ I I +FH + GL++N++ +P S ++ P ++ + LM L+
Sbjct: 303 ITFIAQLASFIVAIPNFHQLQWVGLLSNLIFVPYYSIILFPLSILFFITSHFIVGLMPLN 362
Query: 141 -LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR 198
L ++ F W LD+ I + F + + + F+ ++ + +F R
Sbjct: 363 YLVDLSFNFHDWLLDLFTRIKQ------SHFSVPKFNDWIFIIFIIS-VYYIFWLLAKR 414
>gi|298245298|ref|ZP_06969104.1| ComEC/Rec2-related protein [Ktedonobacter racemifer DSM 44963]
gi|297552779|gb|EFH86644.1| ComEC/Rec2-related protein [Ktedonobacter racemifer DSM 44963]
Length = 519
Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 48/119 (40%), Gaps = 6/119 (5%)
Query: 77 KQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAI-- 134
+L E+ A A+ I + FH + + +AN+L +P+L +++ L+
Sbjct: 52 GGGYLGELLAVTLAAQVATLPIVAVT-FHVVSLVAPLANLLTVPLLGTLLVLGALLCAIG 110
Query: 135 LLMILSLD---NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLM 190
+L L L + + ++ + +I AH A N + + + ++ +
Sbjct: 111 VLSPLLLQLCGELAWPLVHYVAVVISWCAHLSWSALNVGNVDTLLIWLYYALLGALYYL 169
>gi|291538272|emb|CBL11383.1| DNA internalization-related competence protein ComEC/Rec2
[Roseburia intestinalis XB6B4]
Length = 813
Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV- 126
W K + S Q + G +F+ IPVY ++ N+L +P + V+
Sbjct: 357 WAGKIVQSAYQRHAVLQKIGTGFVLQLVILPVTAWYFYEIPVYAMLLNLLVLPFVGIVLA 416
Query: 127 --IPAGLIAILLMI 138
I GL+ +M
Sbjct: 417 SGIAGGLLGCAVMP 430
>gi|320015746|gb|ADV99317.1| putative membrane protein [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 660
Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 47/120 (39%), Gaps = 8/120 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIP-AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
FH I ++ + AN+ A+PI+S +P L L ++ ++ +I + + L +++
Sbjct: 286 FHGISLFSIPANLWAVPIVSLFTVPCVLLALALALLPAVADIFWFLADISLTVVLF---- 341
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
N+ G + + + + S +G+ ++ + + D
Sbjct: 342 ---PLNQLKEGWLHTGMASVAIGYGGWLALFIWRFQWWRSHPLGVIVLCMNMVLLTQRRD 398
>gi|269960985|ref|ZP_06175354.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834204|gb|EEZ88294.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 752
Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 42/113 (37%), Gaps = 7/113 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F + + N++ IP F+V+P IA++ LS D ++ LD ++
Sbjct: 382 FSGTSLSSIAYNLIFIPWFGFIVVPLMFIALIATPLSDD--IAALLWQCLDWVLW----P 435
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+F G S ++ + R + ++ I +++ +
Sbjct: 436 LSWSLQFAEGSWYSMSLEMTLLVIAITCAFIG-ARFLTKGVMAILLLVSVSVA 487
>gi|255102931|ref|ZP_05331908.1| phage membrane protein [Clostridium difficile QCD-63q42]
Length = 740
Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 10/123 (8%)
Query: 68 WTWKKISSIKQSFLNEIRA--NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W W+ + I ++ L A + + + + + +GL A ILA PI F
Sbjct: 386 WLWETLCKISKNALAIASAIHALAIHAELTETQMA-----TVAQWGLNAAILACPI--FW 438
Query: 126 VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV 185
++ AG+IA++ ++ I + I +A ISVA I + + +V
Sbjct: 439 IV-AGIIALVAVLFVGVAIFNHFAGTSVSAIGIVAGAISVAAAFVGNLFIATGNLIIDIV 497
Query: 186 EFL 188
+
Sbjct: 498 ALI 500
>gi|108812744|ref|YP_648511.1| hypothetical protein YPN_2583 [Yersinia pestis Nepal516]
gi|229903152|ref|ZP_04518265.1| putative membrane protein [Yersinia pestis Nepal516]
gi|108776392|gb|ABG18911.1| membrane protein [Yersinia pestis Nepal516]
gi|229678922|gb|EEO75025.1| putative membrane protein [Yersinia pestis Nepal516]
Length = 763
Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 47/120 (39%), Gaps = 8/120 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIP-AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
FH I ++ + AN+ A+PI+S +P L L ++ ++ +I + + L +++
Sbjct: 389 FHGISLFSIPANLWAVPIVSLFTVPCVLLALALALLPAVADIFWFLADISLTVVLF---- 444
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
N+ G + + + + S +G+ ++ + + D
Sbjct: 445 ---PLNQLKEGWLHTGMASVAIGYGGWLALFIWRFQWWRSHPLGVIVLCMNMVLLTQRRD 501
>gi|83589439|ref|YP_429448.1| DNA internalization-related competence protein ComEC/Rec2 [Moorella
thermoacetica ATCC 39073]
gi|83572353|gb|ABC18905.1| DNA internalization-related competence protein ComEC/Rec2 [Moorella
thermoacetica ATCC 39073]
Length = 809
Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 18/186 (9%), Positives = 52/186 (27%), Gaps = 15/186 (8%)
Query: 51 YFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY 110
Y ++ + I + + +F + +
Sbjct: 358 YDSGFQLSFTATWGIVYLYPLLDDLLAWLPAWRAYLVIPLAAQVATLPLVAYYFSFVSLL 417
Query: 111 GLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
L AN++ ++ +V + L ++ L F + +++++ ++
Sbjct: 418 SLPANLITAGLVGAIVTLGLAASALALVSLPLAGTVFNALGPLVNLMLAFLAGLAGLPGM 477
Query: 170 FCIGRIPET------SFVTIVVEFL--------LMVFCKTNIRHIGSIMIGITIIILFTF 215
P V I++ L + + ++R +G + +L
Sbjct: 478 TLPLATPSPLGVAGYYLVLIILRELWLRRREPRWLALWRWHLRELGVVAALTLATLLVYL 537
Query: 216 PYSFSP 221
+ P
Sbjct: 538 YHPGQP 543
>gi|51595759|ref|YP_069950.1| hypothetical protein YPTB1419 [Yersinia pseudotuberculosis IP
32953]
gi|170024891|ref|YP_001721396.1| hypothetical protein YPK_2666 [Yersinia pseudotuberculosis YPIII]
gi|186894838|ref|YP_001871950.1| hypothetical protein YPTS_1521 [Yersinia pseudotuberculosis PB1/+]
gi|51589041|emb|CAH20659.1| putative DNA uptake protein ComEC/Rec2 [Yersinia pseudotuberculosis
IP 32953]
gi|169751425|gb|ACA68943.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pseudotuberculosis YPIII]
gi|186697864|gb|ACC88493.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pseudotuberculosis PB1/+]
Length = 763
Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 47/120 (39%), Gaps = 8/120 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIP-AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
FH I ++ + AN+ A+PI+S +P L L ++ ++ +I + + L +++
Sbjct: 389 FHGISLFSIPANLWAVPIVSLFTVPCVLLALALALLPAVADIFWFLADISLTVVLF---- 444
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
N+ G + + + + S +G+ ++ + + D
Sbjct: 445 ---PLNQLKEGWLHTGMASVAIGYGGWLALFIWRFQWWRSHPLGVIVLCMNMVLLTQRRD 501
>gi|162420003|ref|YP_001606431.1| hypothetical protein YpAngola_A1958 [Yersinia pestis Angola]
gi|162352818|gb|ABX86766.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis Angola]
Length = 763
Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 47/120 (39%), Gaps = 8/120 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIP-AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
FH I ++ + AN+ A+PI+S +P L L ++ ++ +I + + L +++
Sbjct: 389 FHGISLFSIPANLWAVPIVSLFTVPCVLLALALALLPAVADIFWFLADISLTVVLF---- 444
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
N+ G + + + + S +G+ ++ + + D
Sbjct: 445 ---PLNQLKEGWLHTGMASVAIGYGGWLALFIWRFQWWRSHPLGVIVLCMNMVLLTQRRD 501
>gi|332971276|gb|EGK10239.1| hypothetical protein HMPREF9374_2589 [Desmospora sp. 8437]
Length = 649
Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 9/124 (7%)
Query: 106 CIPVYGLIANILAIPILSFV-VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRIS 164
I + I ++ IP+L + + AG L++ L F W I I +
Sbjct: 332 TITFFAFIGAVIFIPLLLVLSLFVAGYSIGFLLLGGLAAFVFLYALWPKGGIWSIVNWFQ 391
Query: 165 VAHNEFCIGRIPETSFVTIVVEFL----LMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + + + L L + GSI+I I ++++ + +
Sbjct: 392 QWLGAGLYKIV---AVFLLSLYLLISTQLYTIFRG-WGWFGSIVIQIALLVIIIWKHKKV 447
Query: 221 PDLL 224
+L
Sbjct: 448 FQIL 451
>gi|144900099|emb|CAM76963.1| G-protein beta WD-40 repeat [Magnetospirillum gryphiswaldense
MSR-1]
Length = 761
Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 30/257 (11%), Positives = 68/257 (26%), Gaps = 26/257 (10%)
Query: 151 WGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITII 210
W L + IA A + +P + + +V + +
Sbjct: 84 WDLWLGREIARLSGGAAAVSHVAMVPGQNRFLTIGGDSSLVVWD---------VANLANP 134
Query: 211 ILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQ 270
+ + D++ G VA+ + ++ +S P I + W + + A
Sbjct: 135 LKLGAALVPASDVVFLNDGATVAVGGVDGSVTLWSIPERRILANWTAHGVGNVRLAISSA 194
Query: 271 KEDLQEKNQSSLKEILRSMQPR-----------KFLCIKKSFCVGCHRSDVIVGVLKRKD 319
L ++ + L + +S V +D V VL R
Sbjct: 195 GGQLTSAGADGAVRTWDAVGGKLIAEKQFETAVTALAVHESGSVAVGGADGSVTVLDRNQ 254
Query: 320 MIRLSCQLSDILITTIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSN------DNDK 373
++ + +T + + +S I + +
Sbjct: 255 ANPRRVEMHEGAVTALSFAPSGEHLISGGQDGGIFMLRDGKATRMGKHDKAVTGVQSGQG 314
Query: 374 VKFIIKSAIENLHFPWT 390
F + + + W
Sbjct: 315 EAFSLSVSADGTTRLWN 331
>gi|227538321|ref|ZP_03968370.1| competence protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227241836|gb|EEI91851.1| competence protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 692
Score = 38.6 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 39/123 (31%), Gaps = 17/123 (13%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANI-LAIPILSFVVIPAGLIAILLMILSLDNIPF 146
I + +F P Y LIAN+ +A+P + + ++L LD +
Sbjct: 399 ISIAAQLFTLPLVFYYFGQFPNYFLIANLFIALPSTCMM-----YVGLVLAFFPLDLLS- 452
Query: 147 GVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIG 206
M L+ +I + +P + +V ++ + +
Sbjct: 453 QFMGKILEWLIQFM-----WEGLRILDGLPGSLIQGVVFSIDQVILL-----FLACFFLS 502
Query: 207 ITI 209
I
Sbjct: 503 IAF 505
>gi|239631591|ref|ZP_04674622.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|239526056|gb|EEQ65057.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
paracasei 8700:2]
Length = 727
Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 20/167 (11%), Positives = 54/167 (32%), Gaps = 24/167 (14%)
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSA-----------SASIFLIKHFHCIPVYGLIANI 116
W + + ++ + + + ++ + H + ++ N
Sbjct: 303 WQPRVLLTMGGQLTYLLTGLLVALPAMRSWQLNWRLVLASMPVIAWHTFSFNILTVLFNW 362
Query: 117 LAIPILSFVVIPAGLIAILLMILSLDNIP---FGVMAWGLDIIIHIAHRISVAHNEFCIG 173
L +PI V+P IA+LL +L ++ GL + + + G
Sbjct: 363 LLMPIFELGVMPGLAIALLLPHATLTATFDDGLQLLENGLVSLSRV-------PGQIVTG 415
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
P ++ ++M+ R + + +T+ + ++
Sbjct: 416 AFPSW---LALIGVVVMLTVIVAKRWLAAACWFVTVFGWCWYQPNYR 459
>gi|22126656|ref|NP_670079.1| hypothetical protein y2778 [Yersinia pestis KIM 10]
gi|108806682|ref|YP_650598.1| hypothetical protein YPA_0685 [Yersinia pestis Antiqua]
gi|145599573|ref|YP_001163649.1| hypothetical protein YPDSF_2301 [Yersinia pestis Pestoides F]
gi|149366651|ref|ZP_01888685.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|165924324|ref|ZP_02220156.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165938999|ref|ZP_02227552.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Orientalis str. IP275]
gi|166009869|ref|ZP_02230767.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166211467|ref|ZP_02237502.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Antiqua str. B42003004]
gi|167399853|ref|ZP_02305371.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167419591|ref|ZP_02311344.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167423919|ref|ZP_02315672.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|218928542|ref|YP_002346417.1| hypothetical protein YPO1394 [Yersinia pestis CO92]
gi|229841364|ref|ZP_04461523.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229843469|ref|ZP_04463615.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229895842|ref|ZP_04511012.1| putative membrane protein [Yersinia pestis Pestoides A]
gi|294503383|ref|YP_003567445.1| hypothetical protein YPZ3_1273 [Yersinia pestis Z176003]
gi|21959669|gb|AAM86330.1|AE013880_10 hypothetical protein y2778 [Yersinia pestis KIM 10]
gi|108778595|gb|ABG12653.1| putative membrane protein [Yersinia pestis Antiqua]
gi|115347153|emb|CAL20046.1| putative membrane protein [Yersinia pestis CO92]
gi|145211269|gb|ABP40676.1| membrane protein [Yersinia pestis Pestoides F]
gi|149291025|gb|EDM41100.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|165913146|gb|EDR31770.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Orientalis str. IP275]
gi|165923384|gb|EDR40516.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165991265|gb|EDR43566.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166207238|gb|EDR51718.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Antiqua str. B42003004]
gi|166962332|gb|EDR58353.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167050561|gb|EDR61969.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167056768|gb|EDR66531.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|229689816|gb|EEO81877.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229697730|gb|EEO87777.1| putative membrane protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229700765|gb|EEO88794.1| putative membrane protein [Yersinia pestis Pestoides A]
gi|262361424|gb|ACY58145.1| hypothetical protein YPD4_1237 [Yersinia pestis D106004]
gi|262365040|gb|ACY61597.1| hypothetical protein YPD8_0909 [Yersinia pestis D182038]
gi|294353842|gb|ADE64183.1| hypothetical protein YPZ3_1273 [Yersinia pestis Z176003]
Length = 763
Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 47/120 (39%), Gaps = 8/120 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIP-AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
FH I ++ + AN+ A+PI+S +P L L ++ ++ +I + + L +++
Sbjct: 389 FHGISLFSIPANLWAVPIVSLFTVPCVLLALALALLPAVADIFWFLADISLTVVLF---- 444
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
N+ G + + + + S +G+ ++ + + D
Sbjct: 445 ---PLNQLKEGWLHTGMASVAIGYGGWLALFIWRFQWWRSHPLGVIVLCMNMVLLTQRRD 501
>gi|300774231|ref|ZP_07084098.1| possible competence protein [Sphingobacterium spiritivorum ATCC
33861]
gi|300758910|gb|EFK55739.1| possible competence protein [Sphingobacterium spiritivorum ATCC
33861]
Length = 692
Score = 38.6 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 7/71 (9%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANI-LAIPILSFVVIPAGLIAILLMILSLDNIPF 146
I + +F P Y LIAN+ +A+P + + ++L LD +
Sbjct: 399 ISIAAQLFTLPLVFYYFGQFPNYFLIANLFIALPSTCMM-----YVGLVLAFFPLDLLS- 452
Query: 147 GVMAWGLDIII 157
M L+ +I
Sbjct: 453 QFMGKMLEWLI 463
>gi|227535190|ref|ZP_03965239.1| possible competence protein EC [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227187235|gb|EEI67302.1| possible competence protein EC [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 734
Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 20/167 (11%), Positives = 54/167 (32%), Gaps = 24/167 (14%)
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSA-----------SASIFLIKHFHCIPVYGLIANI 116
W + + ++ + + + ++ + H + ++ N
Sbjct: 310 WQPRVLLTMGGQLTYLLTGLLVALPAMRSWQLNWRLVLASMPVIAWHTFSFNILTVLFNW 369
Query: 117 LAIPILSFVVIPAGLIAILLMILSLDNIP---FGVMAWGLDIIIHIAHRISVAHNEFCIG 173
L +PI V+P IA+LL +L ++ GL + + + G
Sbjct: 370 LLMPIFELGVMPGLAIALLLPHATLTATFDDGLQLLENGLVSLSRV-------PGQIVTG 422
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
P ++ ++M+ R + + +T+ + ++
Sbjct: 423 AFPSW---LALIGVVVMLTVIVAKRWLAAACWFVTVFGWCWYQPNYR 466
>gi|116621371|ref|YP_823527.1| hypothetical protein Acid_2252 [Candidatus Solibacter usitatus
Ellin6076]
gi|116224533|gb|ABJ83242.1| hypothetical protein Acid_2252 [Candidatus Solibacter usitatus
Ellin6076]
Length = 480
Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 57/187 (30%), Gaps = 18/187 (9%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F+ ++ G+ Y + E+ W W+ + I ++ S I
Sbjct: 169 FALFFGGVLIHYYLVLCLVPLVMDEA---WRWRPWKRPSGRIVASILGSLVGIAVLSPQI 225
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL----- 153
+H H + LI N IPI+ + PAGL + + + I + V +
Sbjct: 226 LASRHVHGGKWWTLI-NTRQIPIVLTDIFPAGLFLLAMATV---WIVWAVPRKPIMVAPV 281
Query: 154 ------DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI 207
+ F+ ++ + C R G I +
Sbjct: 282 STAERVGWSFLLTLVAGYIGARLVTHAFLNRYFIGMIPGVAIAFSCSLWRRFPGITRIPV 341
Query: 208 TIIILFT 214
I++L
Sbjct: 342 GILVLLA 348
>gi|5616074|gb|AAD45616.1|AF061943_1 prostate derived STE20-like kinase PSK [Homo sapiens]
Length = 1235
Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L V + R + + +G+ L +P P + ++ G V
Sbjct: 1011 HLPSSLFLLLAQGTALGAVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAMAAGGRWV 1070
Query: 233 ALVDKNTL 240
Sbjct: 1071 RQQGPRVR 1078
>gi|332881904|ref|ZP_08449546.1| ComEC/Rec2-like protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332680139|gb|EGJ53094.1| ComEC/Rec2-like protein [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 581
Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 39/194 (20%), Positives = 70/194 (36%), Gaps = 19/194 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
L+D F Y + +I FY P + N + S + F +I
Sbjct: 294 LYDVGFQLSYAAVFSILTFY--PITLCWWFPENKYVRYIWSLVTVGFTAQIVVI------ 345
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +FH + IANI+ +P+L ++I L +L + L NI + +
Sbjct: 346 ----PISLYYFHQFSILFFIANIVVVPLLQPILILGILCLLLASTVGLPNIVVLITEKLI 401
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHI----GSIMIGITI 209
++ + I+ F I I + + I +++ RH I I+I
Sbjct: 402 WLMNTLIRLIAEQE-FFIIRNIQFNTLMLIASLLIVITI--IWWRHYQHQRAVKAILISI 458
Query: 210 IILFTFPYSFSPDL 223
II+ + L
Sbjct: 459 IIMQVVLFYNKYQL 472
>gi|326800368|ref|YP_004318187.1| protein-export membrane protein SecD [Sphingobacterium sp. 21]
gi|326551132|gb|ADZ79517.1| protein-export membrane protein SecD [Sphingobacterium sp. 21]
Length = 1010
Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 59/159 (37%), Gaps = 19/159 (11%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
G IF+I +++ GL+ANI I + F++ + +L + + I
Sbjct: 522 SSVIGLVVVLIFMIFYYNR---AGLVANIAVIFNVFFIMGILASLGAVLTLPGIAGIVLT 578
Query: 148 VMAWGLDIIIHI----------AHRISVAHNEFCIGRIP---ETSFVTIVVEFLLMVFCK 194
M +D + I + A ++ +P ++ T +V +L +F
Sbjct: 579 -MGTAVDANVLIYERIREEYALGKGVRQAISDGYKHAMPSILDSQITTFLVGLILYIFGT 637
Query: 195 TNIRHIGSIMIGITIIILFTFPYSFS--PDLLISEKGNL 231
I + ++ I LFT + + +I + +
Sbjct: 638 GPILGFATTLLIGIITSLFTAIFITRIIFEWMIKKDMKI 676
>gi|322384963|ref|ZP_08058619.1| DNA channel for uptake in competent cells-like protein
[Paenibacillus larvae subsp. larvae B-3650]
gi|321150260|gb|EFX43767.1| DNA channel for uptake in competent cells-like protein
[Paenibacillus larvae subsp. larvae B-3650]
Length = 619
Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 18/118 (15%)
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
A + I +F+ + +AN L +P+ S + PAGL A+ I+ IP G
Sbjct: 307 AVSFPVTIYYFNQFSLLSWLANALLVPVFSMISFPAGLAALAAGII---WIPLG------ 357
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
IA ++ N I +F+T+ + + + I++
Sbjct: 358 ----KIAAVVAEIGNWLAFKTI---AFLTMTGG--WVTIWPSPSLWWIMAYSALAILL 406
>gi|45505130|ref|NP_057235.2| serine/threonine-protein kinase TAO2 isoform 2 [Homo sapiens]
gi|116242813|sp|Q9UL54|TAOK2_HUMAN RecName: Full=Serine/threonine-protein kinase TAO2; AltName:
Full=Kinase from chicken homolog C; Short=hKFC-C;
AltName: Full=Prostate-derived STE20-like kinase 1;
Short=PSK-1; AltName: Full=Thousand and one amino acid
protein 2
gi|119600369|gb|EAW79963.1| TAO kinase 2, isoform CRA_a [Homo sapiens]
gi|187957506|gb|AAI36654.1| TAO kinase 2 [Homo sapiens]
gi|223460882|gb|AAI36656.1| TAO kinase 2 [Homo sapiens]
Length = 1235
Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L V + R + + +G+ L +P P + ++ G V
Sbjct: 1011 HLPSSLFLLLAQGTALGAVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAMAAGGRWV 1070
Query: 233 ALVDKNTL 240
Sbjct: 1071 RQQGPRVR 1078
>gi|332266089|ref|XP_003282048.1| PREDICTED: serine/threonine-protein kinase TAO2 isoform 2 [Nomascus
leucogenys]
Length = 1184
Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L V + R + + +G+ L +P P + ++ G V
Sbjct: 960 HLPSSLFLLLAQGTALGAVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAMAAGGRWV 1019
Query: 233 ALVDKNTL 240
Sbjct: 1020 RQQGPRVR 1027
>gi|148745103|gb|AAI42664.1| TAO kinase 2 [Homo sapiens]
gi|153217436|gb|AAI51222.1| TAO kinase 2 [Homo sapiens]
Length = 1235
Score = 38.6 bits (88), Expect = 1.8, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L V + R + + +G+ L +P P + ++ G V
Sbjct: 1011 HLPSSLFLLLAQGTALGAVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAMAAGGRWV 1070
Query: 233 ALVDKNTL 240
Sbjct: 1071 RQQGPRVR 1078
>gi|224026561|ref|ZP_03644927.1| hypothetical protein BACCOPRO_03318 [Bacteroides coprophilus DSM
18228]
gi|224019797|gb|EEF77795.1| hypothetical protein BACCOPRO_03318 [Bacteroides coprophilus DSM
18228]
Length = 649
Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 18/113 (15%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD +F + + I FY + ++I + + + A +GT
Sbjct: 348 LFDVSFQLSFLAVWGILLFYPV------FSGWLPAGCRRIRWLWNTLSVSMAAQLGTL-- 399
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
F++ +F P Y L+AN+L P+ ++ L L+ + IP+
Sbjct: 400 ----PFVLFYFGAFPTYFLLANLLVTPL------AVCILGSSLAALAFERIPW 442
>gi|332845669|ref|XP_510917.3| PREDICTED: serine/threonine-protein kinase TAO2 isoform 2 [Pan
troglodytes]
Length = 1235
Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L V + R + + +G+ L +P P + ++ G V
Sbjct: 1011 HLPSSLFLLLAQGTALGAVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAMAAGGRWV 1070
Query: 233 ALVDKNTL 240
Sbjct: 1071 RQQGPRVR 1078
>gi|332266087|ref|XP_003282047.1| PREDICTED: serine/threonine-protein kinase TAO2 isoform 1 [Nomascus
leucogenys]
Length = 1235
Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L V + R + + +G+ L +P P + ++ G V
Sbjct: 1011 HLPSSLFLLLAQGTALGAVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAMAAGGRWV 1070
Query: 233 ALVDKNTL 240
Sbjct: 1071 RQQGPRVR 1078
>gi|301066375|ref|YP_003788398.1| putative hydrolase (metallo-beta-lactamase superfamily)
[Lactobacillus casei str. Zhang]
gi|300438782|gb|ADK18548.1| Predicted hydrolase (metallo-beta-lactamase superfamily)
[Lactobacillus casei str. Zhang]
Length = 734
Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 20/167 (11%), Positives = 54/167 (32%), Gaps = 24/167 (14%)
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSA-----------SASIFLIKHFHCIPVYGLIANI 116
W + + ++ + + + ++ + H + ++ N
Sbjct: 310 WQPRVLLTMGGQLTYLLTGLLVALPAMRSWQLNWRLVLASMPVIAWHTFSFNILTVLFNW 369
Query: 117 LAIPILSFVVIPAGLIAILLMILSLDNIP---FGVMAWGLDIIIHIAHRISVAHNEFCIG 173
L +PI V+P IA+LL +L ++ GL + + + G
Sbjct: 370 LLMPIFELGVMPGLAIALLLPHATLTATFDDGLQLLENGLVSLSRV-------PGQIVTG 422
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
P ++ ++M+ R + + +T+ + ++
Sbjct: 423 AFPSW---LALIGVVVMLTVIVAKRWLAAACWFVTVFGWCWYQPNYR 466
>gi|297698503|ref|XP_002826357.1| PREDICTED: serine/threonine-protein kinase TAO2-like isoform 2
[Pongo abelii]
Length = 1122
Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L V + R + + +G+ L +P P + ++ G V
Sbjct: 898 HLPSSLFLLLAQGTALGAVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAMAAGGRWV 957
Query: 233 ALVDKNTL 240
Sbjct: 958 RQQGPRVR 965
>gi|297260347|ref|XP_002798270.1| PREDICTED: hypothetical protein LOC100430604 [Macaca mulatta]
Length = 588
Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 41/104 (39%), Gaps = 4/104 (3%)
Query: 116 ILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI 175
+ A +L+ V+ P GL+A++L L L + G + L +I+ ++ F + +
Sbjct: 146 LSAFSLLALVLGPLGLLALVLGPLGLFALILGPLGL-LALILGPLGLFTLVLGPFSLFAL 204
Query: 176 PETSF---VTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
++ L + + ++ + ++ L P
Sbjct: 205 VLGPLCFSALVLSPLCLFALVLGPLSLLALVLGPLGLLALVLGP 248
>gi|219841904|gb|AAI44345.1| TAOK2 protein [Homo sapiens]
Length = 1122
Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L V + R + + +G+ L +P P + ++ G V
Sbjct: 898 HLPSSLFLLLAQGTALGAVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAMAAGGRWV 957
Query: 233 ALVDKNTL 240
Sbjct: 958 RQQGPRVR 965
>gi|270486947|ref|ZP_06204021.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis KIM D27]
gi|270335451|gb|EFA46228.1| DNA internalization-related competence protein ComEC/Rec2 [Yersinia
pestis KIM D27]
Length = 728
Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 48/126 (38%), Gaps = 8/126 (6%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIP-AGLIAILLMILSLDNIPFGVMAWGLDII 156
I FH I ++ + AN+ A+PI+S +P L L ++ ++ +I + + L ++
Sbjct: 383 PLQIGLFHGISLFSIPANLWAVPIVSLFTVPCVLLALALALLPAVADIFWFLADISLTVV 442
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
+ N+ G + + + + S +G+ ++ +
Sbjct: 443 LF-------PLNQLKEGWLHTGMASVAIGYGGWLALFIWRFQWWRSHPLGVIVLCMNMVL 495
Query: 217 YSFSPD 222
+ D
Sbjct: 496 LTQRRD 501
>gi|149378071|ref|ZP_01895793.1| DNA internalization-related competence protein ComEC/Rec2
[Marinobacter algicola DG893]
gi|149357640|gb|EDM46140.1| DNA internalization-related competence protein ComEC/Rec2
[Marinobacter algicola DG893]
Length = 793
Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 8/115 (6%)
Query: 108 PVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISV 165
PV GL+AN+ AIP +S VV+P + +++ + + + GV+ + ++
Sbjct: 407 PVLGLVANLFAIPWVSLVVMPLLALGAFVLVFLPAANALVIGVLDV-VFGVLW-----QG 460
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ +P S V F L+V + G ++ L+ F
Sbjct: 461 LSWLANVDPVPTVSGSLQVAGFSLVVLMALLVPFSGFRKASACVVSLWIAVSVFR 515
>gi|322437063|ref|YP_004219275.1| DNA internalization-related competence protein ComEC/Rec2
[Acidobacterium sp. MP5ACTX9]
gi|321164790|gb|ADW70495.1| DNA internalization-related competence protein ComEC/Rec2
[Acidobacterium sp. MP5ACTX9]
Length = 864
Score = 38.6 bits (88), Expect = 1.9, Method: Composition-based stats.
Identities = 26/196 (13%), Positives = 63/196 (32%), Gaps = 3/196 (1%)
Query: 59 IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILA 118
+ ++ + + + A +G ++ + FH V+ L AN+L
Sbjct: 419 LSAASHLKPIRYIPAQAFRLILWTLELALVGIVVELVMALPMAIFFHRAAVFALPANMLV 478
Query: 119 IPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP 176
+P+++ + PA + + +++ L +P + A L + + IS + P
Sbjct: 479 LPVIAILA-PAAVATFVASLINPWLAILPGTLTATLLHTLTSVISHISHLKSADVRIPPP 537
Query: 177 ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVD 236
+ L G+++ + ++ P +L + AL
Sbjct: 538 SPWIAAAALAAWLTCCWAVRRSRAGTVITAAVLPLIAVAILWPEPPILTPNTLEITALDV 597
Query: 237 KNTLISNYSNPPSFIF 252
+P
Sbjct: 598 GQGDSLLAVSPEGRTM 613
>gi|206891046|ref|YP_002247923.1| DNA internalization-related competence protein ComEC/Rec2
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742984|gb|ACI22041.1| DNA internalization-related competence protein ComEC/Rec2
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 749
Score = 38.2 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 68/194 (35%), Gaps = 32/194 (16%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D +F + AIG+ +++ + + K + + L + +
Sbjct: 307 DLSFQLSFLATVAIGF---------ATDIYKNFKNKIQNKVLSYLLLSLLISFSAS--LI 355
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLD 154
+ +I FH + + +AN+ A ++ + P +I + + ++ + +P +
Sbjct: 356 TAPIVIYKFHYLSLISPVANLTAGFVIGMFLFPLNVIFVFIYLITGIYPLP--------E 407
Query: 155 IIIHIAHR--------ISVAHNEFCIGRIPETSFVTIVVEFLLMVF----CKTNIRHIGS 202
I+ IA+ S + + I IP S + L +F K + +
Sbjct: 408 IVNTIANFSFKLMHLLASFSFSSLSIPPIPLGSVILFYFGIFLSIFACYGLKGWFKKLSF 467
Query: 203 IMIGITIIILFTFP 216
++ + I
Sbjct: 468 MVSCLLIFSSVLTS 481
>gi|291326410|ref|ZP_06124373.2| DNA internalization-related competence protein ComEC/Rec2
[Providencia rettgeri DSM 1131]
gi|291314427|gb|EFE54880.1| DNA internalization-related competence protein ComEC/Rec2
[Providencia rettgeri DSM 1131]
Length = 789
Score = 38.2 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIH-IAH 161
F+ I V GL+ANI +P++S+ V+PA L+ + L+ + + + +D+ + + +
Sbjct: 402 FNGINVMGLVANIWFVPLVSWCVVPAILL-LFLVPIKVVQQPILYTIDRVIDMGLEPLPY 460
Query: 162 RISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIIL 212
+ + I +++V K R+ G I + I L
Sbjct: 461 LSTFWSEFINVPY----YLFLICWLSIIVVLFKWYKRYFGLIGCVVISIFL 507
>gi|160874821|ref|YP_001554137.1| DNA internalization-like competence protein ComEC/Rec2 [Shewanella
baltica OS195]
gi|160860343|gb|ABX48877.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella baltica OS195]
gi|315267060|gb|ADT93913.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella baltica OS678]
Length = 783
Score = 38.2 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 31/236 (13%), Positives = 71/236 (30%), Gaps = 36/236 (15%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + + I Y I ++ S + + + +G +A
Sbjct: 325 FWLSFCALGIILYTLEIQPREFTPASTRRARLRTGMMQFWAIQWRLSLGLGLLQAAL--- 381
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIH 158
F + V+ L NILA+P SFVVIP + + L + ++
Sbjct: 382 -----FGGVSVHSLWMNILAVPWFSFVVIPLAMAGFVCWWLG-TALGLSHFGLSSLGVLR 435
Query: 159 IAHRISVAHNEF------CIGRIPETSFVTIVVEFLLM---VFCK---------TNIRHI 200
++ + + S + + F + V + + +
Sbjct: 436 LSDWSLSPYAQLLDISRQLPAHWLALSDSLLALGFCALVGGVLWRYVPKHKHYIAWLSLL 495
Query: 201 GSIMIGITIIILFTFP--YSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQ 254
+ + + + + + + + + G +A+V + N FI+
Sbjct: 496 SLLFMPALLFCMTLWSPVQTHRWTMHLLDVGQGLAVVIE-------KNGKGFIYDT 544
>gi|310287548|ref|YP_003938806.1| hydrolase [Bifidobacterium bifidum S17]
gi|309251484|gb|ADO53232.1| Putative hydrolase [Bifidobacterium bifidum S17]
Length = 689
Score = 38.2 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 51/146 (34%), Gaps = 14/146 (9%)
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ W + + + L A + + +P+ + AN+L P+
Sbjct: 461 AGPLTDWLACMLPRLLSAPLAMTIAA-----QSLTLPIQVLMDPQLPLASVPANLLVGPV 515
Query: 122 LSFVVIPAGLIAIL---LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI--GRIP 176
+ F + AGL+A+ LM + + G ++ +A +S G IP
Sbjct: 516 VGFATM-AGLVALFISWLMP-QCGYVLAWIAGCGTSVMERVAAMVSDNEFATMPWAGGIP 573
Query: 177 ETSFVTIVVEFL--LMVFCKTNIRHI 200
+ +V +++ +R +
Sbjct: 574 GALLMVLVESACATVLILATRWLRLL 599
>gi|213583579|ref|ZP_03365405.1| hypothetical protein SentesTyph_21143 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 171
Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGVMAWGLDIIIHIA 160
FH I V ++AN+ A+P ++FV +P L ++L L+ + + L + ++
Sbjct: 66 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYLTDRALAALFYLL 125
Query: 161 HR 162
+
Sbjct: 126 NA 127
>gi|114563559|ref|YP_751072.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella frigidimarina NCIMB 400]
gi|114334852|gb|ABI72234.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella frigidimarina NCIMB 400]
Length = 831
Score = 38.2 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 5/117 (4%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F I + + N+L +P S VVIP L++ + +L+L V+ + + I
Sbjct: 416 FGGIAPHSIWLNMLLVPWFSLVVIPLTLLSFCIWLLAL--WILWVLGIDTASLQSFSLMI 473
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ P + + + L T G + + +++L Y S
Sbjct: 474 FQWA---NLSLEPFAWLLQLSDDLPLNQLVLTEKELAGGMFFVLALMLLVLRRYVPS 527
>gi|329895072|ref|ZP_08270817.1| DNA internalization-related competence protein ComEC/Rec2 [gamma
proteobacterium IMCC3088]
gi|328922517|gb|EGG29855.1| DNA internalization-related competence protein ComEC/Rec2 [gamma
proteobacterium IMCC3088]
Length = 780
Score = 38.2 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 50/135 (37%), Gaps = 3/135 (2%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS---LDNIPFGVMAWGLDIIIHIA 160
F + + AN+LA+P+ ++P L+ L L + + + AW L + +
Sbjct: 405 FGQASLVSIPANMLAVPVAGLWLVPLSLLGALAGSLGAMTVSALLWSWAAWPLGLAESLL 464
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + + + + LL+ + R I +++G+ + +
Sbjct: 465 DSAWLEMGVWQSTLSIAFALLLSALWLLLLTPLRLAWRFIVLVVMGLMLSYRPMSDSTDR 524
Query: 221 PDLLISEKGNLVALV 235
+ + G A++
Sbjct: 525 ARFWVFDVGQGSAML 539
>gi|167470894|ref|ZP_02335598.1| hypothetical protein YpesF_24202 [Yersinia pestis FV-1]
Length = 702
Score = 38.2 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 19/120 (15%), Positives = 47/120 (39%), Gaps = 8/120 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIP-AGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
FH I ++ + AN+ A+PI+S +P L L ++ ++ +I + + L +++
Sbjct: 389 FHGISLFSIPANLWAVPIVSLFTVPCVLLALALALLPAVADIFWFLADISLTVVLF---- 444
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
N+ G + + + + S +G+ ++ + + D
Sbjct: 445 ---PLNQLKEGWLHTGMASVAIGYGGWLALFIWRFQWWRSHPLGVIVLCMNMVLLTQRRD 501
>gi|26988627|ref|NP_744052.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas putida KT2440]
gi|24983407|gb|AAN67516.1|AE016380_4 DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas putida KT2440]
Length = 737
Score = 38.2 bits (87), Expect = 2.2, Method: Composition-based stats.
Identities = 22/196 (11%), Positives = 59/196 (30%), Gaps = 11/196 (5%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P A L P+G P D + + A G + + +
Sbjct: 120 PLRAGEQWRLAVTLQRPNGLLNPHGPDREAQLLARRVGATGTVKAGQLLAPVAGGWRDAL 179
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+++ ++ + + + + + + G + ++L I ++
Sbjct: 180 RQRLLMVEANGRQAALVALVLGDG---AGLAREDWQTLQATGTV-HLLVISGQHIGLVAG 235
Query: 130 GLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL 188
L ++ L L +A ++A+ G +P ++
Sbjct: 236 LLYGLVA---GLARWGLWPARLPWLPWACGLAMAAALAYGWLAGGGVPVQRACLMLA--- 289
Query: 189 LMVFCKTNIRHIGSIM 204
+++ + RH+G+
Sbjct: 290 VVLLWRLRFRHLGAFF 305
Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFGVMAWGLDIIIHIAHRISV 165
+ + +AN++A+P +S V+P L+ L++ L + + LD++ ++
Sbjct: 376 VSLSAPLANLVAVPWVSLAVLPLALLGTLMLPLAGVGEALLWLAGGLLDVLFRGLALVAQ 435
Query: 166 AHNEFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGI 207
+ +P +++ + + LL++ + +R +G +M+
Sbjct: 436 QRPAWVPPALPLWAWLLVCLGVLLVLLPRGVPLRGLGGVMLLA 478
>gi|300811340|ref|ZP_07091837.1| DNA internalization competence protein ComEC/Rec2-like protein
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300497704|gb|EFK32729.1| DNA internalization competence protein ComEC/Rec2-like protein
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 728
Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ FL+ F+ + V + NIL +P +++V+P +A+L SL ++ ++
Sbjct: 344 TPFLLYFFYQVNVCTIFYNILVVPYFNYIVMPMTGLALLAPP-SLAAFFEKILEAAEGML 402
Query: 157 IHIAHR 162
++A
Sbjct: 403 ANVAKT 408
>gi|241113026|ref|YP_002972861.1| binding-protein-dependent transport systems inner membrane
component [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240861234|gb|ACS58900.1| binding-protein-dependent transport systems inner membrane
component [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 284
Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 48/119 (40%), Gaps = 3/119 (2%)
Query: 117 LAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP 176
+A+P F+VI +IA L ++ D P+ + G I ++A + +I
Sbjct: 31 IAVP---FLVITVLIIAWELYVVLSDVPPYILPGPGAVAAAFINDWGTLAPALWVTTKIT 87
Query: 177 ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALV 235
S + ++ + R I + +I+ T + SP +LI VAL+
Sbjct: 88 FISLMLALIGGVGFAIFLVQSRWIEIAFYPLAVILQVTPIVAISPLILIYAPSTQVALL 146
>gi|145298545|ref|YP_001141386.1| DNA internalization-related competence protein ComEC/Rec2
[Aeromonas salmonicida subsp. salmonicida A449]
gi|142851317|gb|ABO89638.1| DNA internalization-related competence protein ComEC/Rec2
[Aeromonas salmonicida subsp. salmonicida A449]
Length = 739
Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 46/116 (39%), Gaps = 5/116 (4%)
Query: 126 VIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
+IP LI +LL LS L + F + GL ++ ++S + +P +
Sbjct: 388 IIPLALIGVLLAPLSHWLAHGLFWLADTGLQWVLWALIQLSSQLQLWWP--VPSWAMPVS 445
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
V LL + + + ++L +P + + L + + G ++++
Sbjct: 446 AVLILLWCAWHLPSARPLLLPV-VAALVLAVWPAATAWQLRVLDVGQGLSVLITKG 500
>gi|6808064|emb|CAB70882.1| hypothetical protein [Homo sapiens]
gi|119600371|gb|EAW79965.1| TAO kinase 2, isoform CRA_c [Homo sapiens]
Length = 1062
Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L V + R + + +G+ L +P P + ++ G V
Sbjct: 838 HLPSSLFLLLAQGTALGAVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAMAAGGRWV 897
Query: 233 ALVDKNTL 240
Sbjct: 898 RQQGPRVR 905
>gi|148652580|ref|YP_001279673.1| hypothetical protein PsycPRwf_0771 [Psychrobacter sp. PRwf-1]
gi|148571664|gb|ABQ93723.1| conserved hypothetical protein [Psychrobacter sp. PRwf-1]
Length = 344
Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 53/140 (37%), Gaps = 17/140 (12%)
Query: 98 IFLIKHFHCI---PVYGLIANILAIPILSFVVI----PAGLIAILLMILSLDNIPFGVMA 150
+ HF + G+IA ++ +L+ +++ P L+ ++L + L+ +
Sbjct: 46 LIATYHFGRLLSYAFLGVIAGLIGTTVLAPLMMGNNLPRILLGLVLAFIGLNMLGLPF-- 103
Query: 151 WGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGI--- 207
L+ + + I + P T+F + LL F + + +M +
Sbjct: 104 --LNKLEKVGMGIWKKLSPLRQKVFPLTTFPRALAAGLLWGFLPCGLVYGALLMAAVGNG 161
Query: 208 ---TIIILFTFPYSFSPDLL 224
+++F F P L+
Sbjct: 162 VASGALLMFVFGLGTVPMLV 181
>gi|298207548|ref|YP_003715727.1| competence protein [Croceibacter atlanticus HTCC2559]
gi|83850184|gb|EAP88052.1| competence protein [Croceibacter atlanticus HTCC2559]
Length = 679
Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 67/186 (36%), Gaps = 24/186 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F ++ + + I PK+ + + + + F I A IG
Sbjct: 356 GFQLSYLAVFSII------LLQPKLSKLIPRPKYYISRILWGV---FTVTIAAQIGVL-- 404
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGL 153
+ +FH P + N++ IP L +++ GL+ I L +L + +P + G
Sbjct: 405 ----PLSLFYFHQFPGLFFVTNLIIIPFLG-IILGYGLLCISLALLGI--LPSFIAE-GF 456
Query: 154 DIIIHIAHRISVA---HNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRH--IGSIMIGIT 208
++I + + N F IP + TIV L+ + R I I
Sbjct: 457 RLVIGFMNSVISWVAQQNSFVFKEIPFSEIQTIVTYVLIGTILISIQRFKPTNFIYILCA 516
Query: 209 IIILFT 214
++I
Sbjct: 517 VVIFQL 522
>gi|325568975|ref|ZP_08145268.1| MutG family lantibiotic protection ABC superfamily ATP binding
cassette transporter permease [Enterococcus
casseliflavus ATCC 12755]
gi|325158013|gb|EGC70169.1| MutG family lantibiotic protection ABC superfamily ATP binding
cassette transporter permease [Enterococcus
casseliflavus ATCC 12755]
Length = 609
Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 45/116 (38%), Gaps = 19/116 (16%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F+ + + N+L ++P +A + + SL +++ L
Sbjct: 205 FNYFNIAIRMNNLLVD-----FILPVLTLAGISGLFSLKGKVLPSISYFL---------- 249
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRH---IGSIMIGITIIILFTFP 216
+ + + F+ I+ +LL+ + +IR +G +++G+ I L P
Sbjct: 250 -LIGASLDLVKNSAVFFLLILGGYLLVCLWQASIRWRQRLGLMIVGLAAIGLSVLP 304
>gi|30353923|gb|AAH51798.1| TAOK2 protein [Homo sapiens]
Length = 1426
Score = 38.2 bits (87), Expect = 2.3, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLV 232
+P + F+ + L V + R + + +G+ L +P P + ++ G V
Sbjct: 1202 HLPSSLFLLLAQGTALGAVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAMAAGGRWV 1261
Query: 233 ALVDKNTL 240
Sbjct: 1262 RQQGPRVR 1269
>gi|251792693|ref|YP_003007419.1| DNA internalization-related competence protein ComEC/Rec2
[Aggregatibacter aphrophilus NJ8700]
gi|247534086|gb|ACS97332.1| DNA internalization-related competence protein ComEC/Rec2
[Aggregatibacter aphrophilus NJ8700]
Length = 755
Score = 38.2 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+ + F+ + + IAN++A+PI SF+++P L A+
Sbjct: 341 TPIQLFFFNGLSLNSFIANLIAVPIYSFLLVPLVLFAVF 379
>gi|33152346|ref|NP_873699.1| recombination protein 2 [Haemophilus ducreyi 35000HP]
gi|33148569|gb|AAP96088.1| recombination protein 2 [Haemophilus ducreyi 35000HP]
Length = 762
Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 5/126 (3%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ F + I N+L +P SF+V+P LI++L + G I
Sbjct: 378 APVQYYFFEGLSAVAFITNLLIVPYYSFLVVPLILISLLTNNFFHTWQLTDQLIQGSLTI 437
Query: 157 IHIA--HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
++ A H ++ ++ I + ++ K+ S + + ++
Sbjct: 438 LNTASTHWFWLSQSQQWQLLIGFAGLLVMLYGIFYA---KSKWFWWQSAGLILVSVLFHL 494
Query: 215 FPYSFS 220
F +S
Sbjct: 495 FIFSSK 500
>gi|89075814|ref|ZP_01162198.1| hypothetical Rec2-related protein [Photobacterium sp. SKA34]
gi|89048435|gb|EAR54011.1| hypothetical Rec2-related protein [Photobacterium sp. SKA34]
Length = 771
Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 73/177 (41%), Gaps = 12/177 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLM---ILSLDNIPFGVMAWGLDIIIHIA 160
F + + IANI+A+P++S + +P L+A+L + +SL + + W L II
Sbjct: 402 FGGLSLAAPIANIVAVPLVSTITVPLVLLALLTLWIQPISL--LFWQCADWSLIPIIEGI 459
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ A P +V L +V ++ + + + +I I + + P
Sbjct: 460 QWLEGAWYPLSANLTPLLWGAIVVFMALTLVPL-SSFKWLYTSVIIIALFLFLKEPVKSH 518
Query: 221 PDLLISEKGNLVAL-VDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQE 276
+L+ + G+ +A+ + KN Y WK + P + + +++
Sbjct: 519 WKILVLDVGHGLAVLIIKNNKAVLYDTGNR-----WKDRSVAETTILPVLAQLGIKQ 570
>gi|210623835|ref|ZP_03294084.1| hypothetical protein CLOHIR_02035 [Clostridium hiranonis DSM 13275]
gi|210153330|gb|EEA84336.1| hypothetical protein CLOHIR_02035 [Clostridium hiranonis DSM 13275]
Length = 439
Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 23/41 (56%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV 126
A++ + ++ F I + +I+N+LA+P ++FVV
Sbjct: 307 ASVTIAANIMTLPIIVYSFDGISILSVISNVLAVPFVAFVV 347
>gi|325956534|ref|YP_004291946.1| Competence protein ComEC [Lactobacillus acidophilus 30SC]
gi|325333099|gb|ADZ07007.1| Competence protein ComEC [Lactobacillus acidophilus 30SC]
Length = 761
Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 23/181 (12%), Positives = 61/181 (33%), Gaps = 17/181 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAH 161
F+ I ++ N+L +P ++VV+P I +L + L ++ G +I ++
Sbjct: 375 FYQINFLTVLFNMLVVPYFNWVVMPLAFINVLTFGFTKRLAPFFEKILELGEQLIERLSQ 434
Query: 162 RISVAHNEFCIGRIPETSFVTIVVEFLLMVF-------CKTNIRHIGSIMIGITIIILFT 214
G+I + +++ + ++ + N + IG + +
Sbjct: 435 T---KLGLLDFGQINWWQCLLLLIVSIALIIALREKPEWRFNCKKIGLTLTVFYAVFFSM 491
Query: 215 FPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDL 274
+ + + G + LI+ ++I + P + + +
Sbjct: 492 IHFPLRGQVTFIDVGQ-----GDSILITTPFPRRAYIIDTGGKLNFSGKKVTPQINRITI 546
Query: 275 Q 275
Sbjct: 547 P 547
>gi|315038080|ref|YP_004031648.1| Competence protein ComEC [Lactobacillus amylovorus GRL 1112]
gi|312276213|gb|ADQ58853.1| Competence protein ComEC [Lactobacillus amylovorus GRL 1112]
Length = 761
Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 23/181 (12%), Positives = 61/181 (33%), Gaps = 17/181 (9%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDNIPFGVMAWGLDIIIHIAH 161
F+ I ++ N+L +P ++VV+P I +L + L ++ G +I ++
Sbjct: 375 FYQINFLTVLFNMLVVPYFNWVVMPLAFINVLTFGFTKRLAPFFEKILELGEQLIERLSQ 434
Query: 162 RISVAHNEFCIGRIPETSFVTIVVEFLLMVF-------CKTNIRHIGSIMIGITIIILFT 214
G+I + +++ + ++ + N + IG + +
Sbjct: 435 T---KLGLLDFGQINWWQCLLLLIVSIALIIALREKPEWRFNCKKIGLTLTVFYAVFFSM 491
Query: 215 FPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDL 274
+ + + G + LI+ ++I + P + + +
Sbjct: 492 IHFPLRGQVTFIDVGQ-----GDSILITTPFPRRAYIIDTGGKLNFSGKKVTPQINRITI 546
Query: 275 Q 275
Sbjct: 547 P 547
>gi|283458047|ref|YP_003362658.1| putative membrane metal-binding protein [Rothia mucilaginosa DY-18]
gi|283134073|dbj|BAI64838.1| predicted membrane metal-binding protein [Rothia mucilaginosa
DY-18]
Length = 668
Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 54/150 (36%), Gaps = 10/150 (6%)
Query: 57 KMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA---SIFLIKHFHCIPVYGLI 113
+ ++ S + + + A + ++ + ++ +P+Y +
Sbjct: 495 ALSVTATSALILLGPPLIRLLMRVMPVFCAEMLAAPIVASLWCTPLILAMSGKVPLYSVP 554
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSL---DNIPFGVMAWGLDIIIHIAHRISVAHNEF 170
AN++A P+ + + AGL A+ M+L L ++ I AH + A
Sbjct: 555 ANLIAAPLAP-LSMLAGLAALGFMLLGLPTAADLCLRAGGLAAQGIEWAAHTAAHAPGN- 612
Query: 171 CIGRIPETSFVTIVVEFLLMVFCKTNIRHI 200
P +S +V L ++ + +
Sbjct: 613 --PWEPGSSVPAVVGSALCVLALSVALWWV 640
>gi|328473267|gb|EGF44115.1| Rec2-like protein [Vibrio parahaemolyticus 10329]
Length = 752
Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 37/204 (18%), Positives = 70/204 (34%), Gaps = 22/204 (10%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIP---AGLIAILLMILSLDNIPFGVMAWGLD 154
F L+ N++ IP FVV+P A LIA LL + L + + ++ L
Sbjct: 376 PISGYFFSGFSWSSLVYNLVFIPWFGFVVVPIMFAALIASLLFPM-LATVLWYLLDIFLV 434
Query: 155 IIIH-IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
+ + + I I I V ++V R++ + + +++
Sbjct: 435 PLSWSVRYAIGTWQP------ISAEWTFVIAVVSAVLVLRHVMPRYVWM-FVCVIVVMTG 487
Query: 214 TFP----YSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHV 269
FP ++ D+L G L LV+K + Y + W++ I P +
Sbjct: 488 LFPKQDNQTWRIDVLDVGHG-LAVLVEKEGRVLLYDTGKA-----WQNGSIAEQVITPVL 541
Query: 270 QKEDLQEKNQSSLKEILRSMQPRK 293
+ + L +
Sbjct: 542 HRRGYSSVDTMILSHADNDHAGGR 565
>gi|294782460|ref|ZP_06747786.1| COME operon protein 3 [Fusobacterium sp. 1_1_41FAA]
gi|294481101|gb|EFG28876.1| COME operon protein 3 [Fusobacterium sp. 1_1_41FAA]
Length = 392
Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIII 157
+ +F+ I LI+N++ +P+ SF + IA+ L L + ++ + +I
Sbjct: 292 PITVYYFNTIQFLSLISNLVVLPLASFYIT-INYIALFLENFYLSFLLKPIIKISYNFLI 350
Query: 158 HIAHRIS 164
++ S
Sbjct: 351 YLIDFFS 357
>gi|224476696|ref|YP_002634302.1| hypothetical protein Sca_1210 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421303|emb|CAL28117.1| truncated protein, similar to ComEC late competence protein 3
(fragment 1) [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 627
Score = 38.2 bits (87), Expect = 2.5, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 21/49 (42%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
I S+ + +F+ I G +N+L IP S ++ P + L
Sbjct: 339 AITFISQVSSFVISAYYFNQIQWIGFFSNLLFIPYYSLILFPLAIFTYL 387
>gi|283850311|ref|ZP_06367600.1| cytochrome c assembly protein [Desulfovibrio sp. FW1012B]
gi|283574337|gb|EFC22308.1| cytochrome c assembly protein [Desulfovibrio sp. FW1012B]
Length = 630
Score = 37.9 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 16/130 (12%), Positives = 46/130 (35%), Gaps = 3/130 (2%)
Query: 120 PILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
P+ + +P L+ + ++L+L + W + + A+ + + + +P +
Sbjct: 341 PLSGLLSVPGFLVILAWLMLALSAVVLLGTMWPVVSRLWSANPVGLDAGFYNRVCLPLFA 400
Query: 180 FVTIVVEFLLMVFCKTNIR---HIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVD 236
VT +V F ++ +R +G + + + + + + VA +
Sbjct: 401 LVTFLVAFCPLLSWTEGVRDKAGLGVTLGALVGGGAILYGVGLRLPVALFAGASSVAAMA 460
Query: 237 KNTLISNYSN 246
+
Sbjct: 461 TVVYVLMRQR 470
>gi|262384557|ref|ZP_06077691.1| competence protein [Bacteroides sp. 2_1_33B]
gi|262293850|gb|EEY81784.1| competence protein [Bacteroides sp. 2_1_33B]
Length = 428
Score = 37.9 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 35/123 (28%), Gaps = 23/123 (18%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
+ ++ +F L N+ P L+A+ L+ + + +
Sbjct: 289 TVSIAAQIGTALLCFYYFGQFSTVFLFTNL-----------PVTLLAMFLIPFAFLWLGY 337
Query: 147 GVMAWGLDI-----------IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
V G D ++ + SV GR + FL++
Sbjct: 338 PVDFCGYDWIQKIVEGLVHGMVRVVDVFSVMPYATITGRFSFFEMLG-GYGFLVLCLIYM 396
Query: 196 NIR 198
IR
Sbjct: 397 KIR 399
>gi|167581347|ref|ZP_02374221.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia thailandensis TXDOH]
Length = 495
Score = 37.9 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 39/112 (34%), Gaps = 2/112 (1%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP 145
A + + + F IP+ G +AN AIP + +V P L ++L LD
Sbjct: 384 ARAQFAVTIALAPLTALWFAQIPLTGPLANAFAIPWVGSLVTPIVLAGVVL-PAPLDAPA 442
Query: 146 FGVMAWGLDIIIHIAHRISVAH-NEFCIGRIPETSFVTIVVEFLLMVFCKTN 196
+ + + ++ + A + + + V + + +
Sbjct: 443 YVLGEALVAALMRFLEAAAGAGRTVWMLPAPGGFALAMAAVGVVWALMPRGW 494
>gi|300727111|ref|ZP_07060530.1| putative ComEC/Rec2 family protein [Prevotella bryantii B14]
gi|299775655|gb|EFI72246.1| putative ComEC/Rec2 family protein [Prevotella bryantii B14]
Length = 470
Score = 37.9 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 36/102 (35%), Gaps = 1/102 (0%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
+ + + +F YG+ ++L IP+ + ++ + +LL +
Sbjct: 355 VSLSAQIATLPLTLYYFGQWSCYGIFLSLLVIPLSTIILYGMLGVYLLLPFTVFAQKLYI 414
Query: 148 VMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVVEFL 188
V+ ++I+ + ++ I + + V L
Sbjct: 415 VVEEMVEILNKVVSFVASLPGAMINHVYISKFQVFLLYVAIL 456
>gi|148549023|ref|YP_001269125.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas putida F1]
gi|148513081|gb|ABQ79941.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas putida F1]
Length = 738
Score = 37.9 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 22/196 (11%), Positives = 59/196 (30%), Gaps = 11/196 (5%)
Query: 10 PFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWT 69
P A L P+G P D + + A G + + +
Sbjct: 120 PLRAGEQWRLAVTLQRPAGLLNPHGPDREAQLLGRRVGATGTVKAGQLLAPVAGGWRDAL 179
Query: 70 WKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPA 129
+++ ++ + + + + + + G + ++L I ++
Sbjct: 180 RQRLLMVEANSRQAALVALVLGDG---AGLAREDWQTLQATGTV-HLLVISGQHIGLVAG 235
Query: 130 GLIAILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFL 188
L ++ L L +A ++A+ G +P ++
Sbjct: 236 LLYGLVA---GLARWGLWPARLPWLPWACGLAMAAALAYGWLAGGGVPVQRACLMLA--- 289
Query: 189 LMVFCKTNIRHIGSIM 204
+++ + RH+G+
Sbjct: 290 VVLLWRLRFRHLGAFF 305
>gi|134096252|ref|YP_001101327.1| MFS family transporter [Herminiimonas arsenicoxydans]
gi|133740155|emb|CAL63206.1| putative Permease of the major facilitator superfamily
[Herminiimonas arsenicoxydans]
Length = 397
Score = 37.9 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 44/115 (38%), Gaps = 1/115 (0%)
Query: 110 YGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
YG+ A + + FVV+P+ LI + L + + I++ I+ +
Sbjct: 209 YGVFA-LHVTQMAMFVVMPSALIRFGHLPLGEHWKIYLPVVLASFILMLPPIFIAERRGK 267
Query: 170 FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLL 224
+ + + V + +VF +T + + + + I F + P L+
Sbjct: 268 SKQVFVAAIALLLAVQVGMWLVFAQTQLHWAWLVALLLVFFIAFNILEASQPSLV 322
>gi|311064461|ref|YP_003971186.1| hypothetical protein BBPR_1083 [Bifidobacterium bifidum PRL2010]
gi|310866780|gb|ADP36149.1| Conserved hypothetical protein [Bifidobacterium bifidum PRL2010]
Length = 689
Score = 37.9 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 51/146 (34%), Gaps = 14/146 (9%)
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ W + + + L A + I +P+ + AN+L P+
Sbjct: 461 AGPLTDWLACMLPRLLSAPLAMTIAA-----QSLTLPIQILMDPQLPLASVPANLLVGPV 515
Query: 122 LSFVVIPAGLIAIL---LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI--GRIP 176
+ F + AGL+A+ LM + + G ++ +A +S G IP
Sbjct: 516 VGFATM-AGLVALFISWLMP-QCGYVLAWIAGCGTSVMERVAAMVSDNEFATMPWAGGIP 573
Query: 177 ETSFVTIVVEFL--LMVFCKTNIRHI 200
+ +V +++ +R +
Sbjct: 574 GALLMVLVESACATVLILATRWLRLL 599
>gi|301309166|ref|ZP_07215110.1| ComEC/Rec2-related protein [Bacteroides sp. 20_3]
gi|300832848|gb|EFK63474.1| ComEC/Rec2-related protein [Bacteroides sp. 20_3]
Length = 428
Score = 37.9 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 17/123 (13%), Positives = 34/123 (27%), Gaps = 23/123 (18%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
+ ++ +F L N+ P L+A+ L+ + + +
Sbjct: 289 TVSIAAQIGTALLCFYYFGQFSTVFLFTNL-----------PVTLLAMFLIPFAFFWLGY 337
Query: 147 GVMAWGLDI-----------IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
V G D ++ + S GR + FL++
Sbjct: 338 PVDFCGYDWIQKIVEGLVHGMVRVVDVFSALPYATITGRFSFFEMLG-GYGFLVLCLIYM 396
Query: 196 NIR 198
IR
Sbjct: 397 KIR 399
>gi|313140333|ref|ZP_07802526.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
gi|313132843|gb|EFR50460.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
Length = 567
Score = 37.9 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 51/146 (34%), Gaps = 14/146 (9%)
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ W + + + L A + + +P+ + AN+L P+
Sbjct: 339 AGPLTDWLACMLPRLLSAPLAMTIAA-----QSLTLPIQVLMDPQLPLASVPANLLVGPV 393
Query: 122 LSFVVIPAGLIAIL---LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI--GRIP 176
+ F + AGL+A+ LM + + G ++ +A +S G IP
Sbjct: 394 VGFATM-AGLVALFISWLMP-QCGYVLAWIAGCGTSVMERVAAMVSDNEFATMPWAGGIP 451
Query: 177 ETSFVTIVVEFL--LMVFCKTNIRHI 200
+ +V +++ +R +
Sbjct: 452 GALLMVLVESACATVLILATRWLRLL 477
>gi|74004081|ref|XP_545343.2| PREDICTED: similar to Zinc finger protein 40 (Human immunodeficiency
virus type I enhancer-binding protein 1) (HIV-EP1) (Major
histocompatibility complex binding protein 1) (MBP-1)
(Positive regulatory domain II binding factor 1)
(PRDII-BF1) [Canis familiaris]
Length = 2768
Score = 37.9 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 25/202 (12%), Positives = 52/202 (25%), Gaps = 24/202 (11%)
Query: 119 IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
+P+ V+PAGL + + G M + + I + + P
Sbjct: 2466 VPVGGIHVVPAGLTYSTFVPIQA-----GPMQLTIPAVNVIHRTVGAPGDAVPEVSGPAN 2520
Query: 179 SFVTIVVEFLLMVFCKTNIRHIGSIMI-----------------GITIIILFTFPYSFSP 221
+ ++ IR G + + + P P
Sbjct: 2521 PTGVAELSGVVPCIPIGQIRVPGLQNLSTPGLQPLPSLSMETVNILGLANTNLAPQVHPP 2580
Query: 222 DLLISEKGNLV--ALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEKNQ 279
L ++ G V A + ++ P + P V + E
Sbjct: 2581 GLALNAVGLQVLTASPSPQGSPTPQAHIPGLQILNIALPTLIPSVSQVPVDAQGAAELPA 2640
Query: 280 SSLKEILRSMQPRKFLCIKKSF 301
S + +P + ++
Sbjct: 2641 SQSRAREAQPKPAAAVSAQQGG 2662
>gi|284931143|gb|ADC31081.1| PTS system glucose-specific IIABC component [Mycoplasma
gallisepticum str. F]
Length = 890
Score = 37.9 bits (86), Expect = 2.9, Method: Composition-based stats.
Identities = 33/249 (13%), Positives = 74/249 (29%), Gaps = 37/249 (14%)
Query: 31 FPGLFDFNFSSYY---KGISAIGYFYS---------IPKMIYSSESHNTWTWKKISSIKQ 78
P LF + + G++A+ F +S++ + + +
Sbjct: 86 LPTLFAIAIAVAFTNQSGVAALSAFVGWLIFNATQTALIFPANSQTFTILYYNNVPATAL 145
Query: 79 SFLNEIRA-NIGTYGSASASIFLIKHFHCIPVYGLI-------ANILAIPILSFVVI-PA 129
+ +R+ + +G F+ L N +PI++ + + P
Sbjct: 146 AMNLGLRSLSTSVFGGVIVGAITALLFNKFHTIQLPKVVGFFNGNRF-VPIITLLTMLPV 204
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL 189
L+A+++ I + L ++ + S+ +P L
Sbjct: 205 ALVALMIWP--AIGIGLNALGQSLGVLSRNGNFNSLIFGYVERALVP-FGLHHAFYAPLW 261
Query: 190 MVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYS--NP 247
+I II+ + +P ++ E G V + + +N P
Sbjct: 262 FTSAGGSI---------ANIIVNQAGSDAIAPLIVTDENGQRV-IRSIVGVAANKDAVKP 311
Query: 248 PSFIFSQWK 256
F W
Sbjct: 312 AGFTAQNWM 320
>gi|262171154|ref|ZP_06038832.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio mimicus MB-451]
gi|261892230|gb|EEY38216.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio mimicus MB-451]
Length = 747
Score = 37.9 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 70/187 (37%), Gaps = 20/187 (10%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLD--NIPFGVMAW 151
+ F + + ++ N++ IP S V++PA + + L + +
Sbjct: 371 APVTAYFFGGLSITAVLYNLVFIPWFSVVIVPALFLGLALTVTIPTWAELYWPWVDWTFL 430
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIII 211
LD + A + + G ++ +++ + + + + ++I+
Sbjct: 431 PLDWALQFADVGWLVIPQSIQG---------LIAALVVLSLLY-RVMSLRACALSLSIVG 480
Query: 212 LFTFPYSFSP----DLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAP 267
L+ + S +P D+L G L ++++N Y S+ + +I P +
Sbjct: 481 LWWWFPSSAPLWRMDVLDVGHG-LAIVIEQNDRAIVYDTGSSWPGGSYAKNVIEPILQQR 539
Query: 268 HVQKEDL 274
+++ D
Sbjct: 540 GIRRLDG 546
>gi|78223122|ref|YP_384869.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacter metallireducens GS-15]
gi|78194377|gb|ABB32144.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacter metallireducens GS-15]
Length = 798
Score = 37.9 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 53/137 (38%), Gaps = 13/137 (9%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD +F + I G P + T KK+ + A + +
Sbjct: 351 LFDISFQLSFLAI--WGILVLTPLCMEPFGDLREGTLKKV---------LLFAAVSVAAT 399
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAW 151
+ ++ FH V GL+ N +A+P+L + + AG A+ L+ L + G+ AW
Sbjct: 400 IVTLLPVVHTFHRASVAGLVGNFVAVPLLGYGAVVAGFSALPLIYLFPAAAKFLLGIAAW 459
Query: 152 GLDIIIHIAHRISVAHN 168
+ I I ++
Sbjct: 460 LVRISDGIMATVAQIPP 476
>gi|284044285|ref|YP_003394625.1| ComEC/Rec2-related protein [Conexibacter woesei DSM 14684]
gi|283948506|gb|ADB51250.1| ComEC/Rec2-related protein [Conexibacter woesei DSM 14684]
Length = 523
Score = 37.9 bits (86), Expect = 3.0, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 50/129 (38%), Gaps = 3/129 (2%)
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAG 130
++ + + + L+ HF + + L AN+LA P ++ V+
Sbjct: 370 ARLRRRGAPAPVADAVAMSLAATLGTAPLLVFHFGELSLVSLPANLLAAPAIAPVMWLGM 429
Query: 131 LIAILLMILSLDNIPFGVM-AWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE--F 187
L A + + + +PF M A+ L + IAH + + +P T + V
Sbjct: 430 LAAAVGQLAAALALPFNAMNAFLLGYVGTIAHEAAGVPHASTRAALPGTVALVAVYGVVG 489
Query: 188 LLMVFCKTN 196
+L+ +T
Sbjct: 490 VLVALLRTR 498
>gi|225021706|ref|ZP_03710898.1| hypothetical protein CORMATOL_01734 [Corynebacterium matruchotii
ATCC 33806]
gi|224945697|gb|EEG26906.1| hypothetical protein CORMATOL_01734 [Corynebacterium matruchotii
ATCC 33806]
Length = 556
Score = 37.9 bits (86), Expect = 3.1, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 39/122 (31%), Gaps = 2/122 (1%)
Query: 49 IGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP 108
G+ S+ + I + + + + +
Sbjct: 301 YGFALSVAATGGIIAAVPPLH-ALIGRTGLPDIIVRALAVALAAHLVTMPIVALMSNRVS 359
Query: 109 VYGLIANILAIPILSFVVIPAGLIAIL-LMILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
V + AN+LA P ++ + I + AIL L+ L+ IP ++ I +A +
Sbjct: 360 VIAVAANLLAAPAVAPITILGLVAAILSLLPGGLETIPLAIIGPLAHWIGLVATGGAALP 419
Query: 168 NE 169
Sbjct: 420 GA 421
>gi|255327138|ref|ZP_05368213.1| integral membrane protein [Rothia mucilaginosa ATCC 25296]
gi|255295756|gb|EET75098.1| integral membrane protein [Rothia mucilaginosa ATCC 25296]
Length = 669
Score = 37.9 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 55/150 (36%), Gaps = 10/150 (6%)
Query: 57 KMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA---SIFLIKHFHCIPVYGLI 113
+ ++ S + + + A + ++ + ++ +P+Y +
Sbjct: 495 ALSVTATSALILLGPPLIRLLMRVMPVFCAEMLAAPIVASLWCTPLILAMSGKVPLYSVP 554
Query: 114 ANILAIPILSFVVIPAGLIAILLMILSL---DNIPFGVMAWGLDIIIHIAHRISVAHNEF 170
AN++A P+ + + AGL+A+ M+L L ++ I AH + A
Sbjct: 555 ANLVAAPLAP-LSMLAGLVALGFMLLGLPTAADLCLRAGGLAAQGIEWAAHTAAHAPGN- 612
Query: 171 CIGRIPETSFVTIVVEFLLMVFCKTNIRHI 200
P +S +V L ++ + +
Sbjct: 613 --PWEPGSSVPAVVCSALCVLALSIALWWV 640
>gi|148260102|ref|YP_001234229.1| cytochrome-c oxidase [Acidiphilium cryptum JF-5]
gi|326402944|ref|YP_004283025.1| cytochrome o ubiquinol oxidase subunit I [Acidiphilium multivorum
AIU301]
gi|146401783|gb|ABQ30310.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Acidiphilium
cryptum JF-5]
gi|325049805|dbj|BAJ80143.1| cytochrome o ubiquinol oxidase subunit I [Acidiphilium multivorum
AIU301]
Length = 689
Score = 37.9 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 29/194 (14%), Positives = 58/194 (29%), Gaps = 22/194 (11%)
Query: 53 YSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYG- 111
P M +S WT + I + + + G A +L HF + G
Sbjct: 234 LRAPGMTWSRLPFVVWTSLTTNIIALTAFPILGVALAMLG---ADRYLGTHFFTAGLGGN 290
Query: 112 --LIANILAI---PILSFVVIPAGLIAILLMILSLDNIPFGVMAW--------GLDIIIH 158
L N+ I P + FVV+PA ++ + FG G+ +
Sbjct: 291 LMLYTNLFWIWGHPEVYFVVLPAFGFISEIIPTFAEKPLFGYATMVIATFAIGGISWGVW 350
Query: 159 IAHRISVAHNEFCIGRIPETSFVTIVVEFL-----LMVFCKTNIRHIGSIMIGITIIILF 213
+ H ++ + + + + + + +R ++ + + L
Sbjct: 351 LHHFFTMGAGPGINIFFSTATMLVGIPTGVKVFNWALTLWRGRLRFEPPMLWALGALFLL 410
Query: 214 TFPYSFSPDLLISE 227
L I
Sbjct: 411 LVGGLTGMMLAIPA 424
>gi|163840679|ref|YP_001625084.1| putative DNA uptake protein [Renibacterium salmoninarum ATCC 33209]
gi|162954155|gb|ABY23670.1| putative DNA uptake protein [Renibacterium salmoninarum ATCC 33209]
Length = 592
Score = 37.5 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 7/98 (7%)
Query: 106 CIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRI 163
+ Y L ANILA P+++ I G++A+ +I L ++ V + +A
Sbjct: 441 QLASYTLPANILAAPVVAAGTI-FGMLALCSVIFVPWLASVLLIVAGLTAGWVSTVARFF 499
Query: 164 SVAHNEFCIGRIPETSFVTIVVEF---LLMVFCKTNIR 198
S + P V + F ++ + +IR
Sbjct: 500 SELPGA-ALPWPPGWGGVVAMAAFSLSVVFLLFLGSIR 536
>gi|163787473|ref|ZP_02181920.1| competence protein [Flavobacteriales bacterium ALC-1]
gi|159877361|gb|EDP71418.1| competence protein [Flavobacteriales bacterium ALC-1]
Length = 610
Score = 37.5 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 11/111 (9%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV-IPAGLIAILLMILSLDNIP 145
+ A + +FH P I+NI+ IP L ++ +IA+ LM + LD+
Sbjct: 326 TVTLAAQAGVVPISLFYFHQFPGLFFISNIVVIPFLGLILGFGLFVIALALMNI-LDSSI 384
Query: 146 FGVMAWGLD----IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
++ +D I +A +F IP T I F+++
Sbjct: 385 VTAYSFVIDSLNNFITWVAQF-----EDFLFRDIPFTILQVICSYFIIIGL 430
>gi|297283773|ref|XP_001106511.2| PREDICTED: serine/threonine-protein kinase TAO2 isoform 4 [Macaca
mulatta]
Length = 1122
Score = 37.5 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 174 RIPETSFVTIVVE-FLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGN 230
+P + F+ + L V + R + + +G+ L +P P + ++ G
Sbjct: 898 HLPSSLFLLLAQGTALGAVLGLSWRRGLMGVPLGLGAAWLLAWPGLALPLVAMAAGGR 955
>gi|224283183|ref|ZP_03646505.1| Putative hydrolase [Bifidobacterium bifidum NCIMB 41171]
Length = 637
Score = 37.5 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 51/146 (34%), Gaps = 14/146 (9%)
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
+ W + + + L A + + +P+ + AN+L P+
Sbjct: 409 AGPLTDWLACMLPRLLSAPLAMTIAA-----QSLTLPIQVLMDPQLPLASVPANLLVGPV 463
Query: 122 LSFVVIPAGLIAIL---LMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI--GRIP 176
+ F + AGL+A+ LM + + G ++ +A +S G IP
Sbjct: 464 VGFATM-AGLVALFISWLMP-QCGYVLAWIAGCGTSVMERVAAMVSDNEFATMPWAGGIP 521
Query: 177 ETSFVTIVVEFL--LMVFCKTNIRHI 200
+ +V +++ +R +
Sbjct: 522 GALLMVLVESACATVLILATRWLRLL 547
>gi|170726171|ref|YP_001760197.1| DNA internalization-like competence protein ComEC/Rec2 [Shewanella
woodyi ATCC 51908]
gi|169811518|gb|ACA86102.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella woodyi ATCC 51908]
Length = 765
Score = 37.5 bits (85), Expect = 3.7, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 45/119 (37%), Gaps = 5/119 (4%)
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
+K S I+ + ++ F + +YG++ N + +P S +VIPA + +
Sbjct: 359 LKLSLFWAIQWRLSLGLGLLQAVL----FGGLTLYGILFNFIFVPWFSLLVIPAAIFTFV 414
Query: 136 LMILSLDNIP-FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFC 193
+ L L V+ +D + + +P + + + + FLL
Sbjct: 415 IWGLGLTAGFNLSVLFELVDKTLWPVTQALDLFVVLPGAWLPISDHMMLALFFLLCGSW 473
>gi|254426979|ref|ZP_05040686.1| DNA internalization-related competence protein ComEC/Rec2
[Alcanivorax sp. DG881]
gi|196193148|gb|EDX88107.1| DNA internalization-related competence protein ComEC/Rec2
[Alcanivorax sp. DG881]
Length = 740
Score = 37.5 bits (85), Expect = 3.7, Method: Composition-based stats.
Identities = 16/117 (13%), Positives = 43/117 (36%), Gaps = 2/117 (1%)
Query: 45 GISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHF 104
G++ + P S+ ++ ++ I + + ++ F
Sbjct: 320 GMALLVVLLITPLAALSASLWLSFGA--VACIAMLTRSHAPWQLMLLLPVVMAVAGAVLF 377
Query: 105 HCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAH 161
+AN++ +P+ + +VIPA L+ L L + + + ++ +A+
Sbjct: 378 QQWTPSAPLANLILVPLYTLLVIPAALLGALFQQPWLLGAAATGVEFSVWVMTWLAN 434
>gi|261253311|ref|ZP_05945884.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio orientalis CIP 102891]
gi|260936702|gb|EEX92691.1| predicted hydrolase of the metallo-beta-lactamase superfamily
[Vibrio orientalis CIP 102891]
Length = 634
Score = 37.5 bits (85), Expect = 3.9, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 39/125 (31%), Gaps = 8/125 (6%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVM-AWGLDII 156
FH I + + N++ +P +F+V+P + L ++ M L +
Sbjct: 260 PITALLFHGISLSAFVYNLIFVPWFTFIVVPMLFFTFSVSYLGINTASLWSMADLSLAPV 319
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFP 216
I + + + L+ + + + ++ + I +
Sbjct: 320 IWAIDYAQWGWVDLSYSEVKW-------LGMLVALLLAYRVLNKYGVIAVLAICVSLDTR 372
Query: 217 YSFSP 221
+ P
Sbjct: 373 WQQQP 377
>gi|15841932|ref|NP_336969.1| hypothetical protein MT2487 [Mycobacterium tuberculosis CDC1551]
gi|253798508|ref|YP_003031509.1| hypothetical protein TBMG_01560 [Mycobacterium tuberculosis KZN
1435]
gi|254232552|ref|ZP_04925879.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|308371005|ref|ZP_07423527.2| hypothetical protein TMCG_00513 [Mycobacterium tuberculosis
SUMu003]
gi|13882203|gb|AAK46783.1| hypothetical protein MT2487 [Mycobacterium tuberculosis CDC1551]
gi|124601611|gb|EAY60621.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|253320011|gb|ACT24614.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|308330119|gb|EFP18970.1| hypothetical protein TMCG_00513 [Mycobacterium tuberculosis
SUMu003]
Length = 517
Score = 37.5 bits (85), Expect = 4.0, Method: Composition-based stats.
Identities = 19/194 (9%), Positives = 57/194 (29%), Gaps = 6/194 (3%)
Query: 29 PAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI 88
PA G ++ IG+ S+ W+ + + + +
Sbjct: 320 PALSGSVLVLLAAAPHLAVDIGFALSVAATGALVVIAPVWSRRLVDR-GCPKVLADALAV 378
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-G 147
+ + + + ++AN+ +++ + + + A+L++
Sbjct: 379 AAAAQLVTAPLVAAISGRVSLVAVVANLAVAAVIAPITVLGSVAAVLVVPWPAGAQVLIR 438
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIM--- 204
+ ++ +AH S + + + + R + M
Sbjct: 439 FTGPEVWWVLRVAHWASGVPAATVPVAAGLPGVLLVGGATVF-TVAQWRWRWFRAAMCKT 497
Query: 205 IGITIIILFTFPYS 218
+ + +I L + S
Sbjct: 498 MAVAVICLLAWSLS 511
>gi|306793891|ref|ZP_07432193.1| ComEC/Rec2-related protein [Mycobacterium tuberculosis SUMu005]
gi|308337771|gb|EFP26622.1| ComEC/Rec2-related protein [Mycobacterium tuberculosis SUMu005]
Length = 478
Score = 37.5 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 19/194 (9%), Positives = 57/194 (29%), Gaps = 6/194 (3%)
Query: 29 PAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI 88
PA G ++ IG+ S+ W+ + + + +
Sbjct: 281 PALSGSVLVLLAAAPHLAVDIGFALSVAATGALVVIAPVWSRRLVDR-GCPKVLADALAV 339
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-G 147
+ + + + ++AN+ +++ + + + A+L++
Sbjct: 340 AAAAQLVTAPLVAAISGRVSLVAVVANLAVAAVIAPITVLGSVAAVLVVPWPAGAQVLIR 399
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIM--- 204
+ ++ +AH S + + + + R + M
Sbjct: 400 FTGPEVWWVLRVAHWASGVPAATVPVAAGLPGVLLVGGATVF-TVAQWRWRWFRAAMCKT 458
Query: 205 IGITIIILFTFPYS 218
+ + +I L + S
Sbjct: 459 MAVAVICLLAWSLS 472
>gi|191638324|ref|YP_001987490.1| membrane protein [Lactobacillus casei BL23]
gi|190712626|emb|CAQ66632.1| Integral membrane protein-like protein [Lactobacillus casei BL23]
gi|327382350|gb|AEA53826.1| ComEC [Lactobacillus casei LC2W]
gi|327385551|gb|AEA57025.1| ComEC [Lactobacillus casei BD-II]
Length = 734
Score = 37.5 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 22/170 (12%), Positives = 50/170 (29%), Gaps = 21/170 (12%)
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSA-----------SASIFLIKHFHCIPVYGLIANI 116
W + + ++ + + + ++ + H + ++ N
Sbjct: 310 WQPRVLLTMGGQLTYLLTGLLVALPAMRSWQLNWRLVLASMPVIAWHTFSFNILTVLFNW 369
Query: 117 LAIPILSFVVIPAGLIAILLMILSLDNIP---FGVMAWGLDIIIHIAHRISVAHNEFCIG 173
L +PI V+P IA+LL +L ++ GL + + + G
Sbjct: 370 LLMPIFELGVMPGLAIALLLPHATLTATFDDGLQLLENGLVSLSRV-------PGQIVTG 422
Query: 174 RIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDL 223
P + VV L ++ K + + D+
Sbjct: 423 AFPSWLALIGVVVMLTVIVAKHWLAAACWFVTVFGWCWYQPNYRVVMFDV 472
>gi|303327143|ref|ZP_07357585.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
gi|302863131|gb|EFL86063.1| putative membrane protein [Desulfovibrio sp. 3_1_syn3]
Length = 368
Score = 37.5 bits (85), Expect = 4.1, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 47/132 (35%), Gaps = 16/132 (12%)
Query: 68 WTWKKISSIKQSFLNEIRANIGTY---GSASASIFLIKHFHCIPVYGLIANILA-IPILS 123
+ IS+I ++ + + G F + F+ +G++A ++A IP++
Sbjct: 213 LLRRFISAIHRALRGIMLGIVLVALAQGFLCGIGFAVAGFNQPAFWGMLATLVAPIPVVG 272
Query: 124 FVVIPAGLIAILLMILSLDNIP----FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
A++ + L L + L ++ +A +V F I
Sbjct: 273 T--------ALVWLPLCLSLWFTGKTMAAVGLALWGMLAVAGVDNVLRPLFLRQGIKAPF 324
Query: 180 FVTIVVEFLLMV 191
FV I+ +
Sbjct: 325 FVLILAILCGLA 336
>gi|256827203|ref|YP_003151162.1| ComEC/Rec2-related protein [Cryptobacterium curtum DSM 15641]
gi|256583346|gb|ACU94480.1| ComEC/Rec2-related protein [Cryptobacterium curtum DSM 15641]
Length = 843
Score = 37.5 bits (85), Expect = 4.2, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 51/162 (31%), Gaps = 5/162 (3%)
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
W + Q + + I S + F I F P+ +AN+LA P+ +
Sbjct: 398 WIGVLLFGHAQPIADVL--GITIAASLATLPFSISVFGQFPLVSPLANVLATPLFALTCT 455
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV--TIVV 185
A ++ + ++ + G+ + + +AH + + T+ V
Sbjct: 456 IASILVPIAALIPPLSSVLGIPCFCAQALCDVAHLCAHIPCASIPVAFELPVLLCATLTV 515
Query: 186 EFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISE 227
+L V T +I P L SE
Sbjct: 516 FGVLYVLWPTPS-LPAAISAACLATGALVCILIVPPALHASE 556
>gi|256375341|ref|YP_003099001.1| DNA internalization-related competence protein ComEC/Rec2
[Actinosynnema mirum DSM 43827]
gi|255919644|gb|ACU35155.1| DNA internalization-related competence protein ComEC/Rec2
[Actinosynnema mirum DSM 43827]
Length = 770
Score = 37.5 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 16/158 (10%), Positives = 48/158 (30%), Gaps = 12/158 (7%)
Query: 48 AIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCI 107
A G+ S+ W + E A + + + + +
Sbjct: 333 APGFGLSVAATAALVLLAPRWAEAMRCRGVPRGIAEALA-VPVAAHLATAPLVAGLSGEV 391
Query: 108 PVYGLIANILAIPILSFVVIPAGLIAILLMIL-----SLDNIPFGVMAWGLDIIIHIAHR 162
+ ++AN++ P+++ PA ++ + +L + + + ++ +A
Sbjct: 392 SLVAVLANLVVAPVVA----PATVLGVAAAVLAQVHDGAARLAVRLAGPEVSWLVAVARW 447
Query: 163 ISVAHNEFC--IGRIPETSFVTIVVEFLLMVFCKTNIR 198
S G + + + + + +R
Sbjct: 448 ASGVPGASVRWPGGWTGGALLAVALVVGWALLRLKRVR 485
>gi|320162366|ref|YP_004175591.1| putative competence protein ComEC [Anaerolinea thermophila UNI-1]
gi|319996220|dbj|BAJ64991.1| putative competence protein ComEC [Anaerolinea thermophila UNI-1]
Length = 747
Score = 37.1 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 26/196 (13%), Positives = 64/196 (32%), Gaps = 29/196 (14%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +FS+ + Y+ ++ + +++ L E
Sbjct: 349 GFQLSFSATLGLL-----LYASRLEGWARRITARFLPVRVAGAVAGALGEYILFT-LAAQ 402
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG------ 147
A+ ++ HF + + L+AN L +P + P L + L P G
Sbjct: 403 AATLPVILSHFGRLALSTLLANPLILPAQA----PLLLFGEASLALGAVWQPLGHLLALP 458
Query: 148 ---VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF-------LLMVFCKTNI 197
+ ++ L+++ +A + + + P + + F + + T++
Sbjct: 459 AWALASYTLEVVAWMAR---LPLGAWAVPAPPLWVVILFYLWFSATALRAMGLPRLDTSL 515
Query: 198 RHIGSIMIGITIIILF 213
R ++ I +
Sbjct: 516 RPTWLLLGLFGIAAVL 531
>gi|313674404|ref|YP_004052400.1| pas sensor protein [Marivirga tractuosa DSM 4126]
gi|312941102|gb|ADR20292.1| PAS sensor protein [Marivirga tractuosa DSM 4126]
Length = 616
Score = 37.1 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 20/123 (16%)
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI 172
++N+ A+ I+ FV +P +I+ L + L GV+A I++ + +R+ + +
Sbjct: 26 LSNMAALFIIIFVALPFSVISFLYVPTLLSIPLLGVIAM---ILVWVFNRVGAIYLARIL 82
Query: 173 GRIPETSFVTIVVEFLLMVFCKTNIRH--------IGSIMIGITIIILFTFPYSFSPDLL 224
+ LL +N+ H + IMI +II F L+
Sbjct: 83 PAVTP---------LLLAALFTSNLMHNNEELPLVMFLIMIAFSIIPFLVFDIREKGYLI 133
Query: 225 ISE 227
S
Sbjct: 134 FSA 136
>gi|15609551|ref|NP_216930.1| hypothetical protein Rv2414c [Mycobacterium tuberculosis H37Rv]
gi|121638295|ref|YP_978519.1| hypothetical protein BCG_2430c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148662248|ref|YP_001283771.1| hypothetical protein MRA_2439 [Mycobacterium tuberculosis H37Ra]
gi|148823617|ref|YP_001288371.1| hypothetical protein TBFG_12442 [Mycobacterium tuberculosis F11]
gi|215404348|ref|ZP_03416529.1| hypothetical protein Mtub0_11830 [Mycobacterium tuberculosis
02_1987]
gi|215412166|ref|ZP_03420930.1| hypothetical protein Mtub9_12567 [Mycobacterium tuberculosis
94_M4241A]
gi|215427796|ref|ZP_03425715.1| hypothetical protein MtubT9_15982 [Mycobacterium tuberculosis T92]
gi|215431357|ref|ZP_03429276.1| hypothetical protein MtubE_11883 [Mycobacterium tuberculosis
EAS054]
gi|218754143|ref|ZP_03532939.1| hypothetical protein MtubG1_12244 [Mycobacterium tuberculosis GM
1503]
gi|219558409|ref|ZP_03537485.1| hypothetical protein MtubT1_14337 [Mycobacterium tuberculosis T17]
gi|224990789|ref|YP_002645476.1| hypothetical protein JTY_2424 [Mycobacterium bovis BCG str. Tokyo
172]
gi|254365189|ref|ZP_04981235.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|254551461|ref|ZP_05141908.1| hypothetical protein Mtube_13544 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260187420|ref|ZP_05764894.1| hypothetical protein MtubCP_15506 [Mycobacterium tuberculosis
CPHL_A]
gi|260205717|ref|ZP_05773208.1| hypothetical protein MtubK8_15599 [Mycobacterium tuberculosis K85]
gi|289448056|ref|ZP_06437800.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289553796|ref|ZP_06443006.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
gi|289570562|ref|ZP_06450789.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289575107|ref|ZP_06455334.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289746195|ref|ZP_06505573.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289751019|ref|ZP_06510397.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289754521|ref|ZP_06513899.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289762581|ref|ZP_06521959.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|294994478|ref|ZP_06800169.1| ComEC/Rec2-related protein [Mycobacterium tuberculosis 210]
gi|297635018|ref|ZP_06952798.1| ComEC/Rec2-related protein [Mycobacterium tuberculosis KZN 4207]
gi|297732010|ref|ZP_06961128.1| ComEC/Rec2-related protein [Mycobacterium tuberculosis KZN R506]
gi|298525896|ref|ZP_07013305.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|306776681|ref|ZP_07415018.1| hypothetical protein TMAG_02973 [Mycobacterium tuberculosis
SUMu001]
gi|306780455|ref|ZP_07418792.1| hypothetical protein TMBG_00957 [Mycobacterium tuberculosis
SUMu002]
gi|306789566|ref|ZP_07427888.1| hypothetical protein TMDG_00892 [Mycobacterium tuberculosis
SUMu004]
gi|306798288|ref|ZP_07436590.1| hypothetical protein TMFG_01378 [Mycobacterium tuberculosis
SUMu006]
gi|306804163|ref|ZP_07440831.1| hypothetical protein TMHG_01608 [Mycobacterium tuberculosis
SUMu008]
gi|306808734|ref|ZP_07445402.1| hypothetical protein TMGG_00976 [Mycobacterium tuberculosis
SUMu007]
gi|306972793|ref|ZP_07485454.1| hypothetical protein TMJG_00682 [Mycobacterium tuberculosis
SUMu010]
gi|307080498|ref|ZP_07489668.1| hypothetical protein TMKG_00676 [Mycobacterium tuberculosis
SUMu011]
gi|307085096|ref|ZP_07494209.1| hypothetical protein TMLG_02166 [Mycobacterium tuberculosis
SUMu012]
gi|313659345|ref|ZP_07816225.1| hypothetical protein MtubKV_13034 [Mycobacterium tuberculosis KZN
V2475]
gi|1655645|emb|CAB03744.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|121493943|emb|CAL72418.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|134150703|gb|EBA42748.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|148506400|gb|ABQ74209.1| hypothetical protein MRA_2439 [Mycobacterium tuberculosis H37Ra]
gi|148722144|gb|ABR06769.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
gi|224773902|dbj|BAH26708.1| hypothetical protein JTY_2424 [Mycobacterium bovis BCG str. Tokyo
172]
gi|289421014|gb|EFD18215.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289438428|gb|EFD20921.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
gi|289539538|gb|EFD44116.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289544316|gb|EFD47964.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289686723|gb|EFD54211.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289691606|gb|EFD59035.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289695108|gb|EFD62537.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289710087|gb|EFD74103.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|298495690|gb|EFI30984.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308214930|gb|EFO74329.1| hypothetical protein TMAG_02973 [Mycobacterium tuberculosis
SUMu001]
gi|308326691|gb|EFP15542.1| hypothetical protein TMBG_00957 [Mycobacterium tuberculosis
SUMu002]
gi|308333959|gb|EFP22810.1| hypothetical protein TMDG_00892 [Mycobacterium tuberculosis
SUMu004]
gi|308341433|gb|EFP30284.1| hypothetical protein TMFG_01378 [Mycobacterium tuberculosis
SUMu006]
gi|308344929|gb|EFP33780.1| hypothetical protein TMGG_00976 [Mycobacterium tuberculosis
SUMu007]
gi|308349240|gb|EFP38091.1| hypothetical protein TMHG_01608 [Mycobacterium tuberculosis
SUMu008]
gi|308357805|gb|EFP46656.1| hypothetical protein TMJG_00682 [Mycobacterium tuberculosis
SUMu010]
gi|308361750|gb|EFP50601.1| hypothetical protein TMKG_00676 [Mycobacterium tuberculosis
SUMu011]
gi|308365360|gb|EFP54211.1| hypothetical protein TMLG_02166 [Mycobacterium tuberculosis
SUMu012]
gi|323719011|gb|EGB28160.1| hypothetical protein TMMG_01706 [Mycobacterium tuberculosis
CDC1551A]
gi|326904031|gb|EGE50964.1| hypothetical protein TBPG_01920 [Mycobacterium tuberculosis W-148]
gi|328458276|gb|AEB03699.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
Length = 514
Score = 37.1 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 19/194 (9%), Positives = 57/194 (29%), Gaps = 6/194 (3%)
Query: 29 PAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI 88
PA G ++ IG+ S+ W+ + + + +
Sbjct: 317 PALSGSVLVLLAAAPHLAVDIGFALSVAATGALVVIAPVWSRRLVDR-GCPKVLADALAV 375
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-G 147
+ + + + ++AN+ +++ + + + A+L++
Sbjct: 376 AAAAQLVTAPLVAAISGRVSLVAVVANLAVAAVIAPITVLGSVAAVLVVPWPAGAQVLIR 435
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIM--- 204
+ ++ +AH S + + + + R + M
Sbjct: 436 FTGPEVWWVLRVAHWASGVPAATVPVAAGLPGVLLVGGATVF-TVAQWRWRWFRAAMCKT 494
Query: 205 IGITIIILFTFPYS 218
+ + +I L + S
Sbjct: 495 MAVAVICLLAWSLS 508
>gi|313115850|ref|ZP_07801283.1| hypothetical protein HMPREF9436_03172 [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310621827|gb|EFQ05349.1| hypothetical protein HMPREF9436_03172 [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 364
Score = 37.1 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 21/205 (10%), Positives = 58/205 (28%), Gaps = 10/205 (4%)
Query: 51 YFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVY 110
F+ K + + + + +S A++ T+ + + +
Sbjct: 22 QFWKNAKNPVKRPWYFKLPER-LWGLAESICISFCASVATFPVLVLRGLSVSIYAVVSSV 80
Query: 111 GLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVMAWGLDIIIHIAHRISVAHNE 169
++ I + +L AGL+ L + L + + I+ +
Sbjct: 81 AVLWLIQPMMLLGLGTAFAGLVPALAPLYGVLSAASAALTGLLDRWAVWIS---AKPGAG 137
Query: 170 FCIGRIPETSFVTIVVEFLLMVF-CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLI--- 225
+++ + F + +R G ++ + + + I
Sbjct: 138 IYFDTAYAAIVCLVLILLCWLAFHWRVRLRVAGPCILLAAAVSIGLGNALSRDVVHIDLV 197
Query: 226 -SEKGNLVALVDKNTLISNYSNPPS 249
S V + +T + + S
Sbjct: 198 GSANAPAVVVTQNDTAVVLFRGGAS 222
>gi|167749586|ref|ZP_02421713.1| hypothetical protein EUBSIR_00544 [Eubacterium siraeum DSM 15702]
gi|167657440|gb|EDS01570.1| hypothetical protein EUBSIR_00544 [Eubacterium siraeum DSM 15702]
Length = 673
Score = 37.1 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 6/167 (3%)
Query: 57 KMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANI 116
S + W K+ + + + ++ + + +F + G+I ++
Sbjct: 337 GAGAVGVSASAWLKDKLPFLNGRLCDTLCVSLC--AALAGIPLSAIYFGTFSLAGIIVSV 394
Query: 117 LAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIP 176
+ +P+ + + + A+ IP +A I+ I A P
Sbjct: 395 ITVPLFTLCLSAMLIFALT----GGAVIPLAAIAHFCCDIMRIVFSAFAAVPFLHFSCEP 450
Query: 177 ETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDL 223
T +TI V + C ++ ++ I I ++ FT + P +
Sbjct: 451 FTVIITIAVISAVAAVCYLLLKKKYAVPILIVSLLCFTAVNTVLPQI 497
>gi|153837345|ref|ZP_01990012.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
parahaemolyticus AQ3810]
gi|149749376|gb|EDM60149.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
parahaemolyticus AQ3810]
Length = 752
Score = 37.1 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 71/202 (35%), Gaps = 18/202 (8%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIP---AGLIAILLMILSLDNIPFGVMAWGLD 154
F L+ N++ IP FVV+P A LIA LL + L + + ++ L
Sbjct: 376 PISGYFFSGFSWSSLVYNLVFIPWFGFVVVPIMFAALIASLLFPM-LATVLWYLLDIFLV 434
Query: 155 IIIH-IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV--FCKTNIRHIGSIMIGITIII 211
+ + + I E +FV V+ +L+ + +++ +T +
Sbjct: 435 PLSWSVRYAIGTWQPISA-----EWTFVIAVMSAVLVSRHVMPRYVWMFVCVIVVMTGLF 489
Query: 212 LFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
+ ++ D+L G L LV+K + Y + W++ I P + +
Sbjct: 490 PKQYNQTWRIDVLDVGHG-LAVLVEKEGRVLLYDTGKA-----WQNGSIAEQVITPVLHR 543
Query: 272 EDLQEKNQSSLKEILRSMQPRK 293
+ L +
Sbjct: 544 RGYSSVDTMILSHADNDHAGGR 565
>gi|315180604|gb|ADT87518.1| ComEC/rec2 family protein [Vibrio furnissii NCTC 11218]
Length = 643
Score = 37.1 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 64/182 (35%), Gaps = 11/182 (6%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL--SLDNIPFGVMAWGLD 154
+ F + + N++ IP S +++P + ++L L +D I + ++
Sbjct: 268 TPISALFFSGFSLSSALYNLVFIPWFSVMIVPLLFLGLVLTSLFEQVDWI-WTLIDLSF- 325
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF--CKTNIRHIGSIMIGITIIIL 212
+ A +S + + + + + V + I +++ + +
Sbjct: 326 WPLSQALTLSESSWV----AVSHATTFVLCAGGIGWVLRPLLSRDARIAVVLLALGMWAF 381
Query: 213 FTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKE 272
+ + D+L G L L+++ + Y + + +L+ P V +
Sbjct: 382 NSPKDRWRIDVLDVGHG-LAVLIERQQRVLLYDTGSGWPDGSYVRSLVVPLLHQRGVHQL 440
Query: 273 DL 274
D
Sbjct: 441 DG 442
>gi|229578206|ref|YP_002836604.1| major facilitator superfamily MFS_1 [Sulfolobus islandicus
Y.G.57.14]
gi|228008920|gb|ACP44682.1| major facilitator superfamily MFS_1 [Sulfolobus islandicus
Y.G.57.14]
Length = 293
Score = 37.1 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 45/112 (40%), Gaps = 6/112 (5%)
Query: 121 ILSFVVIPAG-LIAILLMILSLDNIPFGVMAWGLDIII-----HIAHRISVAHNEFCIGR 174
+ S ++ G LI L S I ++ G++ I +I+ +S +G
Sbjct: 72 LTSMGLVSLGSLIGFLSQTFSWIIIAEFIIGLGIEGEISVVPTYISETVSAERRGRAVGL 131
Query: 175 IPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
+ + F+T ++ + V R + + +++I L T + + I+
Sbjct: 132 VTASGFLTTLIVGPIAVVLGGEWRLLFLAGLLVSLIALITRVWLPESPMWIA 183
>gi|149919085|ref|ZP_01907569.1| competence protein [Plesiocystis pacifica SIR-1]
gi|149820015|gb|EDM79436.1| competence protein [Plesiocystis pacifica SIR-1]
Length = 667
Score = 37.1 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 68 WTWKKISSIKQSFLNEIRANIGTYG---SASASIFLIKHFHCIPVYGLIANILAIPILSF 124
+ +++I + A++ S + + + HF P++GL+AN LA+P+ +
Sbjct: 356 LSLTAMAAIVTAPAERSPADVLALSWRISWATAPVSVAHFGHAPLHGLVANALALPVFAL 415
Query: 125 VVIPAGLIAILLMIL 139
+ +PA L +L +
Sbjct: 416 L-MPAALAGVLAAPV 429
>gi|323344308|ref|ZP_08084534.1| hypothetical protein HMPREF0663_11070 [Prevotella oralis ATCC
33269]
gi|323095037|gb|EFZ37612.1| hypothetical protein HMPREF0663_11070 [Prevotella oralis ATCC
33269]
Length = 512
Score = 37.1 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 20/165 (12%), Positives = 60/165 (36%), Gaps = 21/165 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFY-----SIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI 88
L+D +F + + I FY + I + W W + +
Sbjct: 346 LWDVSFQLSFMAVMGILVFYFPLYHLVKDQILFTSKAVRWLWGMV-------------VV 392
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMIL-SLDNIPFG 147
+ ++ +F + Y L+ N+ A+P+ + ++ +++L +L +I
Sbjct: 393 SVSAQLGTAPLVMYYFGNVSFYFLLTNLFAVPLATIILY-CVFVSVLTAPFPALQSIVIA 451
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
+++ + +++ + + I + + +++ L+
Sbjct: 452 LLS-AVAGVLNRGIAVIASLPGSHISNVNVNFYQVVLMYLLIGCL 495
>gi|46581659|ref|YP_012467.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfovibrio vulgaris str. Hildenborough]
gi|46451082|gb|AAS97727.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfovibrio vulgaris str. Hildenborough]
Length = 974
Score = 37.1 bits (84), Expect = 4.7, Method: Composition-based stats.
Identities = 23/184 (12%), Positives = 57/184 (30%), Gaps = 23/184 (12%)
Query: 39 FSSYYKGISAIGYFY--SIPKMIYSSESHNTWT----------WKKISSIKQSFLNEIRA 86
F+++ G G F + P + + S T + ++++ +R
Sbjct: 456 FAAWLHGGGHHGNFRPGTAPPLAGVTGSTGTLSTGTEGISDAGGPDTATLRDGVWQRVRR 515
Query: 87 NIGTYGSASASIFLIK------HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ + ++ + F + + N+L +P VV+P G + ++
Sbjct: 516 TLMLMALTTLAVQVALLPVQLIGFGRASPWFAL-NLLWLPFADLVVLPLGALGLVCEAAD 574
Query: 141 ----LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN 196
L V A + ++ + + A + + L++ F
Sbjct: 575 LTRPLAGPLLMVAALPCEGLMWLLEWMEGAGLLAVPAMLRPHWTAALGYGALVVAFASLP 634
Query: 197 IRHI 200
R
Sbjct: 635 GRLF 638
>gi|197337439|ref|YP_002158021.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
fischeri MJ11]
gi|197314691|gb|ACH64140.1| DNA internalization-related competence protein ComEC/Rec2 [Vibrio
fischeri MJ11]
Length = 711
Score = 37.1 bits (84), Expect = 4.8, Method: Composition-based stats.
Identities = 47/303 (15%), Positives = 88/303 (29%), Gaps = 19/303 (6%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL--D 142
I F I N++A+P +S +P L+ + +LSL
Sbjct: 323 VVFIQFGLFTLLIPIQGYFFSGISYLSPFINLIAVPWVSLFTVPLSLVGVASDMLSLPIS 382
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
+ + L I +A + + F+ IV L++ +
Sbjct: 383 SWFWNGANGSLKPIWWLAKQAEDSWLLLPTVFNQVIIFILIV---LMLKLFMPLKALVNP 439
Query: 203 IMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITP 262
+ I +T + D L G V + + I + W + I
Sbjct: 440 LFILLTCAAFIRPDKKWQVDFLDVGHGLAVLIEVNDKTIIYDTGMK------WSNGSIAE 493
Query: 263 FHEAPHVQKEDLQEKNQSSLKEILRSMQPRKFLCIKK---SFCVGCHRSDVIVGVLKRKD 319
P + + +Q L + K I++ + SD+ + +
Sbjct: 494 SVIEPILHRRGIQSITGLILSHLDNDHAGGKDYLIERFTPDWVRTSEVSDIT-TPCIQGE 552
Query: 320 MIRLSCQLSDIL---ITTIRDINTKLCNVSLLITPEILQKQGSL-EITIIPPSNDNDKVK 375
R ++L R N C + L I G + I+ + N ND
Sbjct: 553 KWREGIIEFEVLWPPKLVKRAYNPHSCVIKLEIDKWTFLFTGDIDAISEMLILNQNDFSS 612
Query: 376 FII 378
+
Sbjct: 613 VDV 615
>gi|227542971|ref|ZP_03973020.1| membrane metal-binding protein ComEC [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227181193|gb|EEI62165.1| membrane metal-binding protein ComEC [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 527
Score = 37.1 bits (84), Expect = 4.8, Method: Composition-based stats.
Identities = 17/139 (12%), Positives = 48/139 (34%), Gaps = 15/139 (10%)
Query: 106 CIPVYGLIANILAIPILSFVVIPAGLIAIL-----LMILSLDNIPFGVMAWGLDIIIHIA 160
+ + ++AN+LA V P ++ + L+ + + + G I +A
Sbjct: 345 RVSLVSVVANLLA----GIAVAPVTVLGLCGAVAMLLPGGGEGVFIRLAEPGAWWIHAVA 400
Query: 161 HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + +G + V +++ + + R + +++ + I +
Sbjct: 401 TWANNLPHA-TVGISAAWAVVV--AGWIVYLILDGHPRLVATVVALVVIGGGHLPWRAGP 457
Query: 221 PDLLISEKGNLVALVDKNT 239
P +V + D +
Sbjct: 458 PQATFDA---VVGVNDYDG 473
>gi|90408069|ref|ZP_01216240.1| phosphoglycerol transferase MdoB, alkaline phosphatase superfamily
protein [Psychromonas sp. CNPT3]
gi|90310826|gb|EAS38940.1| phosphoglycerol transferase MdoB, alkaline phosphatase superfamily
protein [Psychromonas sp. CNPT3]
Length = 636
Score = 37.1 bits (84), Expect = 4.9, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 45/123 (36%), Gaps = 3/123 (2%)
Query: 74 SSIKQSFLNEIRANIGTYGSASASI--FLIKHFHCIPVYGLIANILAIPILSFVVIPAGL 131
+ I + + S + ++ F + + L+ ++++P+L +P L
Sbjct: 43 ALIALMVATRYFTFLPEFPSDIMGVTFIVVATFSQMALLALVMGLISLPVLLLGKMPRNL 102
Query: 132 IAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV 191
+ + + + + + + HI + + P +++T++ L++
Sbjct: 103 LQAFIASIGIAFLIIDTLVFA-QYRFHINAVVLELVLSGQVVSFPLVTWLTVIGGIFLLL 161
Query: 192 FCK 194
+
Sbjct: 162 LAQ 164
>gi|331090749|ref|ZP_08339596.1| DNA internalization-like competence protein ComEC/Rec2
[Lachnospiraceae bacterium 2_1_46FAA]
gi|330399857|gb|EGG79516.1| DNA internalization-like competence protein ComEC/Rec2
[Lachnospiraceae bacterium 2_1_46FAA]
Length = 732
Score = 37.1 bits (84), Expect = 5.0, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVV-IPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ F +P Y L+ NI IP++ F++ + +AI + SL + L +
Sbjct: 337 PVTLYFFFEVPTYALLLNIFVIPLMPFLLGMALFGVAICFIFQSLGVWILKGSGFFLTLY 396
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTI 183
+ + + P+ V +
Sbjct: 397 NRLCELAMEFPHPRIVLGKPKWWQVVV 423
>gi|91200435|emb|CAJ73482.1| similar to thiol:disulfide interchange protein [Candidatus Kuenenia
stuttgartiensis]
Length = 601
Score = 37.1 bits (84), Expect = 5.0, Method: Composition-based stats.
Identities = 33/213 (15%), Positives = 65/213 (30%), Gaps = 21/213 (9%)
Query: 42 YYKGISAIGYFYSIP-KMIYSSESHNTWTWKKISSIKQSFLN----EIRANIGTYGSASA 96
Y + S + ++ S + + I
Sbjct: 246 VYAALGVTAASTGALFGAALQSPWVIGFVVAVFVALAMSMFGFYYLRVPSFISDRLGGRT 305
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
+ F V GLI+ I+A P + ++ + + L V AWGL ++
Sbjct: 306 GRGVAGVF----VMGLISGIIASPCIGPILASLLVYIASTGNIFLGFWMLFVFAWGLGVL 361
Query: 157 IHIAHRISVAHNEFCIGRIPETSFVTIV----VEFLLMVFCKTNIRHI---GSIMIGITI 209
+ + S + +P + FLL+ +R I G+ +I + I
Sbjct: 362 LIVLGTFS-----GAVKALPRSGAWMETVERIFGFLLIGAAFYYLRLIIPEGAFIILLGI 416
Query: 210 IILFTFPYSFSPDLLISEKGNLVALVDKNTLIS 242
++ +S D L + + LI+
Sbjct: 417 FLIVAAVFSGGFDKLTFDSSRFQRVRKSFGLIA 449
>gi|228996186|ref|ZP_04155834.1| GerA spore germination protein [Bacillus mycoides Rock3-17]
gi|228763561|gb|EEM12460.1| GerA spore germination protein [Bacillus mycoides Rock3-17]
Length = 515
Score = 37.1 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 41/106 (38%), Gaps = 9/106 (8%)
Query: 109 VYGLIAN----ILAIPILSFVVIP----AGLIAILLMILSLDNIPFGVMAWGLDIIIHIA 160
G+++N ++AI ++ +IP + +L + L FG++ + + IA
Sbjct: 398 QAGIVSNIMIIVVAITAIASFIIPNYDMGAAVRLLRFPMMLSAALFGIVGLVIGWMTLIA 457
Query: 161 HRISVAHNEFCIGR-IPETSFVTIVVEFLLMVFCKTNIRHIGSIMI 205
H IS+ G + F + F+ R G+ I
Sbjct: 458 HLISLESLGTPYGTPLAPFRFADMKDAFVRFPLWAMRSRPKGTGAI 503
>gi|217970403|ref|YP_002355637.1| DNA internalization-related competence protein ComEC/Rec2 [Thauera
sp. MZ1T]
gi|217507730|gb|ACK54741.1| DNA internalization-related competence protein ComEC/Rec2 [Thauera
sp. MZ1T]
Length = 835
Score = 37.1 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 4/108 (3%)
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
+ S + S + L+ F +P+ +AN++AIP++SFVV P L+A
Sbjct: 412 GRVAPSAGWRAALRVQLAISFALVPLLLAQFQAVPLLSPLANLVAIPLVSFVVTPLVLLA 471
Query: 134 ILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
I + + + ++ ++ P
Sbjct: 472 I---PWPI-PLLLVPADFAAGWMMDFLAPLAALERAMIERAAPPPWLF 515
>gi|292487832|ref|YP_003530707.1| recombination protein 2 [Erwinia amylovora CFBP1430]
gi|292899059|ref|YP_003538428.1| competence-like protein [Erwinia amylovora ATCC 49946]
gi|291198907|emb|CBJ46017.1| putative competence-related protein (metallo-beta-lactamase
superfamily protein) [Erwinia amylovora ATCC 49946]
gi|291553254|emb|CBA20299.1| Recombination protein 2 [Erwinia amylovora CFBP1430]
Length = 754
Score = 37.1 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
FH I + L+AN+ A+P++S V +P L+A+L +
Sbjct: 383 FHGISLSALLANLWAVPLISLVTVPLILVALLCNAVPWIAPLLW 426
>gi|28897755|ref|NP_797360.1| Rec2-like protein [Vibrio parahaemolyticus RIMD 2210633]
gi|260363818|ref|ZP_05776573.1| DNA internalization competence protein ComEC/Rec2-like protein
[Vibrio parahaemolyticus K5030]
gi|260876922|ref|ZP_05889277.1| DNA internalization competence protein ComEC/Rec2-like protein
[Vibrio parahaemolyticus AN-5034]
gi|260897936|ref|ZP_05906432.1| competence protein ComEC/Rec2 [Vibrio parahaemolyticus Peru-466]
gi|260903471|ref|ZP_05911866.1| DNA internalization competence protein ComEC/Rec2-like protein
[Vibrio parahaemolyticus AQ4037]
gi|28805968|dbj|BAC59244.1| Rec2-related protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308085490|gb|EFO35185.1| competence protein ComEC/Rec2 [Vibrio parahaemolyticus Peru-466]
gi|308093720|gb|EFO43415.1| DNA internalization competence protein ComEC/Rec2-like protein
[Vibrio parahaemolyticus AN-5034]
gi|308110349|gb|EFO47889.1| DNA internalization competence protein ComEC/Rec2-like protein
[Vibrio parahaemolyticus AQ4037]
gi|308113906|gb|EFO51446.1| DNA internalization competence protein ComEC/Rec2-like protein
[Vibrio parahaemolyticus K5030]
Length = 752
Score = 37.1 bits (84), Expect = 5.1, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 71/202 (35%), Gaps = 18/202 (8%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIP---AGLIAILLMILSLDNIPFGVMAWGLD 154
F L+ N++ IP FVV+P A LIA LL + L + + ++ L
Sbjct: 376 PISGYFFSGFSWSSLVYNLVFIPWFGFVVVPIMFAALIASLLFPM-LATVLWYLLDIFLV 434
Query: 155 IIIH-IAHRISVAHNEFCIGRIPETSFVTIVVEFLLMV--FCKTNIRHIGSIMIGITIII 211
+ + + I E +FV VV +L+ + +++ +T +
Sbjct: 435 PLSWSVRYAIGTWQPISA-----EWTFVIAVVSAVLVSRHVMPRYVWMFVCVIVVMTGLF 489
Query: 212 LFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQK 271
+ ++ D+L G L LV+K + Y + W++ I P + +
Sbjct: 490 PKQYNQTWRIDVLDVGHG-LAVLVEKEGRVLLYDTGKA-----WQNGSIAEQVITPVLHR 543
Query: 272 EDLQEKNQSSLKEILRSMQPRK 293
+ L +
Sbjct: 544 RGYSSVDTMILSHADNDHAGGR 565
>gi|260549327|ref|ZP_05823547.1| metallo-beta-lactamase superfamily hydrolase [Acinetobacter sp.
RUH2624]
gi|260407733|gb|EEX01206.1| metallo-beta-lactamase superfamily hydrolase [Acinetobacter sp.
RUH2624]
Length = 810
Score = 37.1 bits (84), Expect = 5.2, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 45/135 (33%), Gaps = 24/135 (17%)
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM-- 137
F+ ++ + S + F I + NI+A+PI+ +++P ++A
Sbjct: 408 FMTKVLIESQGKIFIALSPLTLLFFQQISWIAPLTNIVAVPIVGGIIVPLNILAACTWFI 467
Query: 138 --ILS--------------------LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI 175
L+ + + L + +A ++ G +
Sbjct: 468 VKPFGNMLFYFNDILLSILLSCLGLLEKLSLPLQGISLTPLYLLAISFAIIILFLPKGIL 527
Query: 176 PETSFVTIVVEFLLM 190
P+T + + +++
Sbjct: 528 PKTWGILCCLPLVIV 542
>gi|331085702|ref|ZP_08334785.1| hypothetical protein HMPREF0987_01088 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406625|gb|EGG86130.1| hypothetical protein HMPREF0987_01088 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 542
Score = 37.1 bits (84), Expect = 5.2, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 53/166 (31%), Gaps = 25/166 (15%)
Query: 36 DFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSAS 95
D F + I +G P W S+ + +
Sbjct: 88 DAAFLLSFGAI--LGILLLCPIFQEIFAGEKKWLQTLSGSLAITVILH------------ 133
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL----MILSLDNIPFGVMAW 151
L ++ I +Y + N+L IP++S ++ +I + L M ++ +
Sbjct: 134 --PILSFFYYEISLYAIFLNLLVIPLMS-WILGTAIIGLFLAVLWMPGG--SLVLKSSGF 188
Query: 152 GLDIIIHIAHRISVAHNEFCIGRIPETSFVTI--VVEFLLMVFCKT 195
L+ + N + PE + I + F+ +++ +
Sbjct: 189 LLEGYELLCRMFLRLPNAVVVTGKPEIWKIVIYYCLLFVFVMWWRR 234
>gi|312171953|emb|CBX80210.1| Recombination protein 2 [Erwinia amylovora ATCC BAA-2158]
Length = 754
Score = 37.1 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFG 147
FH I + L+AN+ A+P++S V +P L+A+L +
Sbjct: 383 FHGISLSALLANLWAVPLISLVTVPLILVALLCNAVPWIAPLLW 426
>gi|14520607|ref|NP_126082.1| hypothetical protein PAB2408 [Pyrococcus abyssi GE5]
gi|5457823|emb|CAB49313.1| TRP-repeat-containing protein [Pyrococcus abyssi GE5]
Length = 338
Score = 37.1 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 10/128 (7%)
Query: 121 ILSFVVIPAGLIAILLMILSLDNIPFGVM-AWGLDIIIHIAHRISVAHNEFCIGRIPETS 179
I +V G I ++ +ILSL + +M + L + I+
Sbjct: 18 IAGLIVWKWGFIMLIRIILSLGFLGLTLMLGFFLALTIYAESWKYALL---------LLP 68
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNT 239
F I + ++ +G I+ I + F Y PDL I ++ ++K
Sbjct: 69 FTAISAYGTYLSVTWQKLKVVGGIIAFFIIAVAFGIWYISEPDLTIMDRFRSAETLEKMG 128
Query: 240 LISNYSNP 247
+
Sbjct: 129 RYKQAARK 136
>gi|294660258|ref|NP_852916.2| PTS system glucose-specific transporter subunit IIABC [Mycoplasma
gallisepticum str. R(low)]
gi|284811914|gb|AAP56484.2| PTS system glucose-specific IIABC component [Mycoplasma
gallisepticum str. R(low)]
gi|284930378|gb|ADC30317.1| PTS system glucose-specific IIABC component [Mycoplasma
gallisepticum str. R(high)]
Length = 891
Score = 37.1 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 51/180 (28%), Gaps = 24/180 (13%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLI-------ANILAIPILSFVVI-PAGLIAILLMI 138
+ +G F+ L N +PI++ + + P L+A+++
Sbjct: 156 STSVFGGVIVGAITALLFNKFHTIQLPKVVGFFNGNRF-VPIITLLTMLPVALVALMIWP 214
Query: 139 LSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIR 198
I + L ++ + S +P L +I
Sbjct: 215 --AIGIGLNALGQSLGVLSRNGNFNSFIFGYVERALVP-FGLHHAFYAPLWFTSAGGSI- 270
Query: 199 HIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYS--NPPSFIFSQWK 256
II+ + +P ++ E G V + + +N P F W
Sbjct: 271 --------ANIIVNQAGSNAIAPLIVTDENGQRV-IRSIVGVAANKDAVKPAGFTAQNWM 321
>gi|260201539|ref|ZP_05769030.1| hypothetical protein MtubT4_15837 [Mycobacterium tuberculosis T46]
gi|289443937|ref|ZP_06433681.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289416856|gb|EFD14096.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length = 514
Score = 37.1 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 19/194 (9%), Positives = 57/194 (29%), Gaps = 6/194 (3%)
Query: 29 PAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANI 88
PA G ++ IG+ S+ W+ + + + +
Sbjct: 317 PALSGSVLVLLAAAPHLAVDIGFALSVAATGALVVIAPVWSRRLVDR-GCPKVLADALAV 375
Query: 89 GTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-G 147
+ + + + ++AN+ +++ + + + A+L++
Sbjct: 376 AAAAQLVTAPLVAAISGRVSLVAVVANLAVAAVIAPITVLGSVAAVLVVPWPAGAQVLIR 435
Query: 148 VMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIM--- 204
+ ++ +AH S + + + + R + M
Sbjct: 436 FTGPEVWWVLRVAHWASGVPAATVPVAAGLPGVLLVGGATVF-TVAQWRWRWFRAAMCKT 494
Query: 205 IGITIIILFTFPYS 218
+ + +I L + S
Sbjct: 495 MAVAVICLLAWSLS 508
>gi|311235299|gb|ADP88153.1| ComEC/Rec2-related protein [Desulfovibrio vulgaris RCH1]
Length = 959
Score = 37.1 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 23/184 (12%), Positives = 57/184 (30%), Gaps = 23/184 (12%)
Query: 39 FSSYYKGISAIGYFY--SIPKMIYSSESHNTWT----------WKKISSIKQSFLNEIRA 86
F+++ G G F + P + + S T + ++++ +R
Sbjct: 441 FAAWLHGGGHHGNFRPGTAPPLAGVTGSTGTLSTGTEGISDAGGPDTATLRDGVWQRVRR 500
Query: 87 NIGTYGSASASIFLIK------HFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS 140
+ + ++ + F + + N+L +P VV+P G + ++
Sbjct: 501 TLMLMALTTLAVQVALLPVQLIGFGRASPWFAL-NLLWLPFADLVVLPLGALGLVCEAAD 559
Query: 141 ----LDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN 196
L V A + ++ + + A + + L++ F
Sbjct: 560 LTRPLAGPLLMVAALPCEGLMWLLEWMEGAGLLAVPAMLRPHWTAALGYGALVVAFASLP 619
Query: 197 IRHI 200
R
Sbjct: 620 GRLF 623
>gi|297560785|ref|YP_003679759.1| SSS sodium solute transporter superfamily [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
gi|296845233|gb|ADH67253.1| SSS sodium solute transporter superfamily [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
Length = 533
Score = 37.1 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 27/85 (31%)
Query: 140 SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRH 199
L + WGL I A + +G + ++ + R
Sbjct: 371 GLRLGRLFTLGWGLVFIGAAAMFTGTDNPVVELGLSVASLTYGGLLGAFFLGLWVRRARQ 430
Query: 200 IGSIMIGITIIILFTFPYSFSPDLL 224
+ +I+ + + + F PDL+
Sbjct: 431 LDAIVSFAVAVATMVWLFLFQPDLV 455
>gi|254424121|ref|ZP_05037839.1| Competence protein [Synechococcus sp. PCC 7335]
gi|196191610|gb|EDX86574.1| Competence protein [Synechococcus sp. PCC 7335]
Length = 515
Score = 37.1 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 12/121 (9%), Positives = 40/121 (33%), Gaps = 2/121 (1%)
Query: 78 QSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
+ + + +F +P Y ++ N + P+++ + + + AI +
Sbjct: 381 LPVSVAMVLAVPIAAYLWTIPLQLLYFQVLPTYSVLLNGITTPLVTLISMGGFISAIAAI 440
Query: 138 ILSL-DNIPFGVMAWGLDIIIHIA-HRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ L + + + + I+I + + + I V + ++ +
Sbjct: 441 PVPLIGSFIASTLYYPIHILIWVVDQFNQLPGSSLEFTGIEGWHVVVSYLVYMAICIWLR 500
Query: 196 N 196
Sbjct: 501 R 501
>gi|42523908|ref|NP_969288.1| putative competence protein [Bdellovibrio bacteriovorus HD100]
gi|39576115|emb|CAE80281.1| putative competence protein [Bdellovibrio bacteriovorus HD100]
Length = 304
Score = 37.1 bits (84), Expect = 5.4, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 9/136 (6%)
Query: 64 SHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS 123
+ W + +K + + IG + SA ++ + H LI N+L PI+S
Sbjct: 172 AALALCWGSLLRVKPPLARLLLSQIGIFVFMSAPLWGLGSLH---PLSLIYNLLLAPIVS 228
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
++++P + + LM + + VM + + ++ I V H ++
Sbjct: 229 YMLLPLAFL-VTLMPSGV-FVFDTVMDFFRQTLAFLSEPI-VMHKTRPPSVTALWWWIVF 285
Query: 184 ---VVEFLLMVFCKTN 196
V+ FL + +
Sbjct: 286 WQVVMHFLRVHLWQGR 301
>gi|305680848|ref|ZP_07403655.1| ComEC/Rec2-like protein [Corynebacterium matruchotii ATCC 14266]
gi|305659053|gb|EFM48553.1| ComEC/Rec2-like protein [Corynebacterium matruchotii ATCC 14266]
Length = 556
Score = 37.1 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 40/122 (32%), Gaps = 2/122 (1%)
Query: 49 IGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP 108
G+ S+ + + I + + + + +
Sbjct: 301 YGFALSVAATGGIIAAVPSLH-TLIGRTNLPDIIVRALAVALAAHLVTMPIVALMSNRVS 359
Query: 109 VYGLIANILAIPILSFVVIPAGLIAIL-LMILSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
V + AN+LA P ++ + I + AIL L+ L+ IP ++ I +A +
Sbjct: 360 VIAVAANLLAAPAVAPITILGLVAAILSLLPGGLETIPLAIIGPLAHWIGLVATGGAALP 419
Query: 168 NE 169
Sbjct: 420 GA 421
>gi|296120833|ref|YP_003628611.1| 4-amino-4-deoxy-L-arabinose transferase-like glycosyltransferase of
PMT family [Planctomyces limnophilus DSM 3776]
gi|296013173|gb|ADG66412.1| 4-amino-4-deoxy-L-arabinose transferase-like glycosyltransferase of
PMT family [Planctomyces limnophilus DSM 3776]
Length = 671
Score = 37.1 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 19/173 (10%), Positives = 45/173 (26%), Gaps = 7/173 (4%)
Query: 54 SIPKMIYSSESHNTWTWKKISSIKQSF-LNEIRANIGTYGSASASIFLIKHFHCIPVYGL 112
P + S + W +++ S + IR + + I + G
Sbjct: 76 GTPYFMSSRPPVHNWMIAGSMALRGSEDITSIRLPCLLAVALLSIILYGYARQSLSRVGA 135
Query: 113 IANILAIPILSFVVIPAGLIAILLMILSL---DNIPFGVMAWGLDIIIHIAHRIS--VAH 167
A LA + V+ G + +L + W I ++ +
Sbjct: 136 FATGLAY-VTMIQVMELGRTGETDLPFTLFLSSALLLWHTGWQKQWSAWIIWPVAYLLLT 194
Query: 168 NEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFS 220
+ + L++ + + + GI + +
Sbjct: 195 GAIMTKGPQAPVYFAATIGLYLLINGRARFALSWAHVSGIALCASLIAMWLVP 247
>gi|167837150|ref|ZP_02464033.1| DNA internalization-related competence protein ComEC/Rec2
[Burkholderia thailandensis MSMB43]
Length = 368
Score = 37.1 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 50/139 (35%), Gaps = 2/139 (1%)
Query: 57 KMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANI 116
+ WT + ++ + A + + + + F IP+ G +AN
Sbjct: 231 RAARGRAWIAAWTGARRAAGRLVQRLRDAARAQFAVTIALAPLTVLWFAQIPLAGPLANA 290
Query: 117 LAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAH-NEFCIGRI 175
AIP + +V P L ++L LD + + + ++ + ++ A + +
Sbjct: 291 FAIPWVGSLVTPIVLAGVVL-PAPLDASAYALAHALVATLMRLLDAVAGAGRTVWMLPTP 349
Query: 176 PETSFVTIVVEFLLMVFCK 194
+ T V + + +
Sbjct: 350 GGFALATAAVGVVWALTPR 368
>gi|84386591|ref|ZP_00989617.1| Rec2-related protein [Vibrio splendidus 12B01]
gi|84378397|gb|EAP95254.1| Rec2-related protein [Vibrio splendidus 12B01]
Length = 744
Score = 37.1 bits (84), Expect = 5.5, Method: Composition-based stats.
Identities = 28/204 (13%), Positives = 67/204 (32%), Gaps = 34/204 (16%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
+F + + A+ Y + S S+ T + + IK I + +
Sbjct: 297 SFWLSFGALGAVIYIALNSR---PSSSNTTLIHRVLQLIK----------IQLMLTFLIA 343
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPA---------------GLIAILLMILSLD 142
F I F + + ++ N+L +P +S V IP ++++ +
Sbjct: 344 PFSILFFKGVSLVSVLYNLLLLPWVSMVTIPLLFLAMLLSLILESVSEVMSLTALSHGFS 403
Query: 143 NIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGS 202
+ ++ LD ++ + + + F+ + F+ +T
Sbjct: 404 EQLWMLVDLSLDPLVFSLPFSERFWIQVDNHSMALSVFLILFFGFVSRYLKRT------L 457
Query: 203 IMIGITIIILFTFPYSFSPDLLIS 226
++ I + +L+ L I
Sbjct: 458 SILVIAVFVLWWEFGKQQNKLTID 481
>gi|298486203|ref|ZP_07004266.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|298159210|gb|EFI00268.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
Length = 448
Score = 37.1 bits (84), Expect = 5.6, Method: Composition-based stats.
Identities = 35/314 (11%), Positives = 87/314 (27%), Gaps = 21/314 (6%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+L P+G P FD+ + I A G + + + +++
Sbjct: 124 GERWRMAVKLKRPAGLVNPDAFDYEAWLLAQRIGATGTVVDGQLLTPARGAWRDLIRQRL 183
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
++ A + + + + G + ++L I ++ + A
Sbjct: 184 LAVDAQGREGGLAALVLGDGSG---LSSTDWQVLQDTGTV-HLLVISGQHIGLLAGVIYA 239
Query: 134 ILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
++ L A L +A ++ + +P +V +++
Sbjct: 240 LVA---GLARWGLWPRALPWLPWACALAFIAALGYGLLAGFEVPVRRACVMVA---MVLL 293
Query: 193 CKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVAL----VDKNTLISNYSNPP 248
+ RH+G + + + L + G + + +
Sbjct: 294 WRLRFRHLGVVWPIQRGADFRAAGDTAAGVLAVFRGGWHSGADFQWTSRCLELVAKLDAC 353
Query: 249 SFIFSQWKSALITPFHEAPHVQKEDLQEKNQS------SLKEILRSMQPRKFLCIKKSFC 302
+ W +A A Q+ Q + + + C ++
Sbjct: 354 AVADRNWLAAYSAGAEPADQPQRAVCQFAGCALGQLDRPAACVAWNTAAAGLWCGRRLAL 413
Query: 303 VGCHRSDVIVGVLK 316
G + V V V +
Sbjct: 414 AGRRGAGVAVYVSR 427
>gi|329119612|ref|ZP_08248293.1| competence factor transporting permease/ATP-binding protein ComA
[Neisseria bacilliformis ATCC BAA-1200]
gi|327464209|gb|EGF10513.1| competence factor transporting permease/ATP-binding protein ComA
[Neisseria bacilliformis ATCC BAA-1200]
Length = 802
Score = 36.7 bits (83), Expect = 5.7, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 56/198 (28%), Gaps = 16/198 (8%)
Query: 31 FPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSE------SHNTWTWKKISSIKQSFLNEI 84
G + ++ ++A+ + + S + WT + +
Sbjct: 364 LAGGTALAWRGWWFALAAVLFADPAAALSAGSWLSFGLVAALLWTDAWRVGGGTWYGTAL 423
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
RA + + + F +P +AN AIP S++++P L LL L
Sbjct: 424 RA--QWAATLATVPAAGRLFSALPAASPLANAPAIPWFSWILVPLALAGSLLPFYPLQYA 481
Query: 145 PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIM 204
+ L + A + + V L R G
Sbjct: 482 ASWLGGQTLHALAWAARYAPEWGVAAAPLPLLLLACAACSVLML--------PRGAGLRP 533
Query: 205 IGITIIILFTFPYSFSPD 222
++ F F P+
Sbjct: 534 WAALVLAGFVFYRPAPPE 551
>gi|284030320|ref|YP_003380251.1| DNA internalization-related competence protein ComEC/Rec2
[Kribbella flavida DSM 17836]
gi|283809613|gb|ADB31452.1| DNA internalization-related competence protein ComEC/Rec2
[Kribbella flavida DSM 17836]
Length = 794
Score = 36.7 bits (83), Expect = 5.8, Method: Composition-based stats.
Identities = 14/105 (13%), Positives = 33/105 (31%), Gaps = 1/105 (0%)
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILS-FVVI 127
W+ + + + + + + + + AN+LA P + ++
Sbjct: 370 GWRDVLATWMPIRLAEAIACPLAAQLACTPIVAWLSGQVSLVAVAANLLAGPAVGPATIL 429
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCI 172
G I L+ L + + +W II +A +
Sbjct: 430 GFGAAGIALLSSDLARLAGWLASWPARWIILVAETGADLPGAVSP 474
>gi|217973837|ref|YP_002358588.1| DNA internalization-like competence protein ComEC/Rec2 [Shewanella
baltica OS223]
gi|217498972|gb|ACK47165.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella baltica OS223]
Length = 783
Score = 36.7 bits (83), Expect = 5.8, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 75/233 (32%), Gaps = 30/233 (12%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + + I Y I ++ S + + + +G +A
Sbjct: 325 FWLSFCALGIILYTLEIQPRAFTPASTRRARLRTGMMQFWAIQWRLSLGLGLLQAAL--- 381
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI---------AILLMILSLDNI-PFGV 148
F + V+ L NILA+P SFVVIP + A+ L L ++ +
Sbjct: 382 -----FGGVSVHSLWMNILAVPWFSFVVIPLAMAGFVCWWLGTALGLSHFGLSSLGGLRL 436
Query: 149 MAWGLDI---IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK-----TNIRHI 200
W L ++ I+ ++ H + F +V L K + +
Sbjct: 437 SDWSLSPYAQLLDISQQLPA-HWLALSDSLLALGFYALVGGVLWRYVPKHKNYIAWLSLL 495
Query: 201 GSIMIGITIIILFTFPYSFSPDL---LISEKGNLVALVDKNTLISNYSNPPSF 250
+ + + + + + L+ L +++KN Y +F
Sbjct: 496 SLLFMPALLFCMTLWSPVQTHRWTMHLLDVGQGLTVVIEKNGRGFIYDTGAAF 548
>gi|312131661|ref|YP_003999001.1| comec/rec2-related protein [Leadbetterella byssophila DSM 17132]
gi|311908207|gb|ADQ18648.1| ComEC/Rec2-related protein [Leadbetterella byssophila DSM 17132]
Length = 617
Score = 36.7 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 63/153 (41%), Gaps = 11/153 (7%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS--LDN 143
A++ + + +FH P Y L+AN A+ ++ ++P GL+ +L+ ++ +
Sbjct: 350 ASVSISATLFTLPLSLYYFHQFPNYFLLANT-AVNLVCAPLLPIGLLLLLIYPINWMFEW 408
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFC--IGRIPETSFVTIVVEFLLMVFCKTN----- 196
+ F + + L I+ + + I T V ++ F ++ F K
Sbjct: 409 VGF-IFKFLLIILNRVVEFFAGLPGAVSKDIYISMFTVLVLFLILFSVIHFWKRRTSLGL 467
Query: 197 IRHIGSIMIGITIIILFTFPYSFSPDLLISEKG 229
G + + + +++ + S LLI E G
Sbjct: 468 WGLTGGVFLLFSELLVQNYLESNRGKLLIYEGG 500
>gi|171910742|ref|ZP_02926212.1| predicted hydrolase of metallo-beta-lactamase fold protein
[Verrucomicrobium spinosum DSM 4136]
Length = 791
Score = 36.7 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 51/117 (43%), Gaps = 10/117 (8%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
F +F + I+ +G +S P + + + + + + + Q + +R + +
Sbjct: 363 GFQLSF-AVLAAIALLGGPFSRPFLRWVEP--DPFIPRVLLTGFQQWAWTLRQQVVGLFT 419
Query: 94 ASAS------IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
SA+ + HF LIAN++ +P+ SF V+ A ++ +L L L +
Sbjct: 420 VSAAAWVGSLPLTLGHFQLATPVSLIANVVLVPL-SFCVLFAAVLTLLSAALHLTAV 475
>gi|194365173|ref|YP_002027783.1| DNA internalization-related competence protein ComEC/Rec2
[Stenotrophomonas maltophilia R551-3]
gi|194347977|gb|ACF51100.1| DNA internalization-related competence protein ComEC/Rec2
[Stenotrophomonas maltophilia R551-3]
Length = 799
Score = 36.7 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 26/222 (11%), Positives = 59/222 (26%), Gaps = 11/222 (4%)
Query: 1 MLSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFY--SIPKM 58
M A E R+ P PG FD + +GIS G + +
Sbjct: 139 MSGAEGGRHAVRAGAHWELSLRVRAPRSRINPGGFDGERHALLRGISGTGTVRDPASARE 198
Query: 59 IYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILA 118
++ W + ++I + + + + GL +++A
Sbjct: 199 RRAAHGLPAWRERSSAAIATQVAHPAARFVQALALGDTRGLSDADWEHLRALGL-THLVA 257
Query: 119 IPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET 178
I V+ + + + + A A +
Sbjct: 258 ISGFHVGVVAGFGVMLCR------GLWWLCPGLARRWPRPQAAAWGAALAAVIYAVVAGG 311
Query: 179 SFVTIVVEFLL--MVFCKTNIRHIGSIMIGITIIILFTFPYS 218
+ T+ ++ + + R +G+ ++ P
Sbjct: 312 ALPTVRAALMIGVVALARAGRRPVGAGQGLARAAVVMLLPAP 353
>gi|90406905|ref|ZP_01215096.1| recombination protein [Psychromonas sp. CNPT3]
gi|90311947|gb|EAS40041.1| recombination protein [Psychromonas sp. CNPT3]
Length = 779
Score = 36.7 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 83 EIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL 135
++ + +A I +F + V G++ N+ AIP+ S VIP L+A+
Sbjct: 378 KLLLGVQFAITALMIPLQIHYFSALSVGGMLMNLFAIPVFSLCVIPLILLALF 430
>gi|255065175|ref|ZP_05317030.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria sicca ATCC 29256]
gi|255050596|gb|EET46060.1| DNA internalization-related competence protein ComEC/Rec2
[Neisseria sicca ATCC 29256]
Length = 775
Score = 36.7 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 51/155 (32%), Gaps = 9/155 (5%)
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
W +K+ + + + + L F +P+ + N IP S+V+
Sbjct: 381 LIWASAGRLKER-GWRLAVRGQWAATVLSVVLLGYIFASLPIISPLVNAAMIPWFSWVLT 439
Query: 128 PAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF 187
P L+ +L L G+ + L ++ +A EF + P V
Sbjct: 440 PLALLGSVLPFAPLQWAAAGLAEYTLRGLVWLAE----VSPEFAVAAAPVPLLVLAFAAA 495
Query: 188 LLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
LL + + +G ++ F F D
Sbjct: 496 LLWLLPRG----LGLRPWACLVLAGFVFYRPDRLD 526
>gi|52424986|ref|YP_088123.1| ComEC protein [Mannheimia succiniciproducens MBEL55E]
gi|52307038|gb|AAU37538.1| ComEC protein [Mannheimia succiniciproducens MBEL55E]
Length = 806
Score = 36.7 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDII 156
S + F I + G AN++ +P+ SF+++P L A+ + + + W
Sbjct: 390 SPMQLMTFQGISLAGFWANLIIVPLFSFLLVPVILFALFS---NGAWESWRIADWLAQWF 446
Query: 157 IHI 159
H+
Sbjct: 447 THL 449
>gi|288555666|ref|YP_003427601.1| late competence protein ComEC [Bacillus pseudofirmus OF4]
gi|288546826|gb|ADC50709.1| late competence protein ComEC [Bacillus pseudofirmus OF4]
Length = 775
Score = 36.7 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 17/145 (11%), Positives = 54/145 (37%), Gaps = 15/145 (10%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAIL---LMILSL 141
A + T ++ ++ HF+ + L+ N++ IP +SF+V+P + +L ++ ++
Sbjct: 358 LAAVTTLAQLASLPLILLHFYQASLLSLLLNLIYIPFISFIVLPLAFLGVLCSSILPSNI 417
Query: 142 DNIPFGVMAWGL----DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVE--FLLMVFCKT 195
NI F ++ + + ++ + + + + L +
Sbjct: 418 -NIAFLLLEITIPPVHEWLVRLDGLSLFMVRTGKPNAVALFGSILLFTASILLWEAGKRG 476
Query: 196 NIRHIGSIMIGITIIILFTFPYSFS 220
+ + ++ + ++
Sbjct: 477 WWKLL-----ICGLLWIVISQWAGP 496
>gi|266621666|ref|ZP_06114601.1| metal ion transporter, metal ion transporter family [Clostridium
hathewayi DSM 13479]
gi|288866671|gb|EFC98969.1| metal ion transporter, metal ion transporter family [Clostridium
hathewayi DSM 13479]
Length = 415
Score = 36.7 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 31/206 (15%), Positives = 69/206 (33%), Gaps = 21/206 (10%)
Query: 46 ISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKH-- 103
+ I FY+ ++ + L A I T + +A I+
Sbjct: 161 LGMIVCFYATLAATGGPAWGELGKGLTHWTVAEGSLTTALAYISTNAAITAGIYGTYLGV 220
Query: 104 ---------FHCIPVYGLIANILAIPILSFVVIPAGLIAI------LLMILSLDNIPFGV 148
F+ I + IA++ A+ ++S ++ G I + + L ++
Sbjct: 221 EKKWKKEDLFNGIMLADAIAHVAAVILISGAIVLVGAIVLHPTGTAIKAPAQLGDLLIPF 280
Query: 149 MAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTN-IRHIGSIMIGI 207
+ +++ IA + + + V + V +T IR + I
Sbjct: 281 LGKAAPVVMGIALLAAGFSSLLGN---TQRGMVLLAAGIDKPVGLETKFIRWGCLLCIAF 337
Query: 208 TIIILFTFPYSFSPDLLISEKGNLVA 233
+I +++ S + + I+ VA
Sbjct: 338 AAVICYSYGGSPTQLIFIANIATAVA 363
>gi|288940586|ref|YP_003442826.1| DNA internalization-related competence protein ComEC/Rec2
[Allochromatium vinosum DSM 180]
gi|288895958|gb|ADC61794.1| DNA internalization-related competence protein ComEC/Rec2
[Allochromatium vinosum DSM 180]
Length = 775
Score = 36.7 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 106 CIPVYGLIANILAIPILSFVVIPAGLIAIL--LMILSLDNIPFGVMAWGLDIIIHIAHRI 163
+ + N++A+P+ S ++P LIA L L+ ++ +P ++A GL ++ +
Sbjct: 394 QASLIAPLVNLVAVPLFSAPILPLVLIASLLSLVPVTGFAVPLRLVADGLGWCLNGLDWL 453
Query: 164 SVAHN-EFCIGRIPETSFVTIVVEFLLMVFCKT-NIRHIGSIMIGITIIILFTFPY 217
+ + P ++ + ++ +L++ + R +G I++ + P
Sbjct: 454 AAQPWSAVHLPAQPLWAWGSALLGAVLLLAPRGLPGRWLGWILMLPLVAARPATPG 509
>gi|229583085|ref|YP_002841484.1| conserved hypothetical transporter [Sulfolobus islandicus
Y.N.15.51]
gi|228013801|gb|ACP49562.1| conserved hypothetical transporter [Sulfolobus islandicus
Y.N.15.51]
Length = 252
Score = 36.7 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 45/112 (40%), Gaps = 6/112 (5%)
Query: 121 ILSFVVIPAG-LIAILLMILSLDNIPFGVMAWGLDIII-----HIAHRISVAHNEFCIGR 174
+ S ++ G LI L S I ++ G++ I +I+ +S +G
Sbjct: 72 LTSMGLVSLGSLIGFLSQTFSWIIIAEFIIGLGIEGEISVVPTYISETVSAERRGRAVGL 131
Query: 175 IPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
+ + F+T ++ + V R + + +++I L T + + I+
Sbjct: 132 VTASGFLTTLIVGPIAVVLGGEWRLLFLAGLLVSLIALITRVWLPESPMWIA 183
>gi|257465428|ref|ZP_05629799.1| recombination protein 2 [Actinobacillus minor 202]
gi|257451088|gb|EEV25131.1| recombination protein 2 [Actinobacillus minor 202]
Length = 721
Score = 36.7 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 25/91 (27%), Gaps = 23/91 (25%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRI 163
F L AN+L +P+ S V++P L +L +
Sbjct: 338 FAGTSPLSLPANMLIVPLYSMVLVPIILFTLLTD-----------------------NLF 374
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
S I + + + + +
Sbjct: 375 STWGLADYIAQFSLWLLKPLSNAWYDLSLWQ 405
>gi|300741550|ref|ZP_07071571.1| ComEC/Rec2-related protein [Rothia dentocariosa M567]
gi|300380735|gb|EFJ77297.1| ComEC/Rec2-related protein [Rothia dentocariosa M567]
Length = 553
Score = 36.7 bits (83), Expect = 6.3, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 61/168 (36%), Gaps = 10/168 (5%)
Query: 37 FNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASA 96
F + K +G+ S + T + + + I A+ +
Sbjct: 365 FCLIAAPKLAGDLGFILSTVATASLIALGPSLTRLLMRLLPHTLAELIAASASASLWCTP 424
Query: 97 SIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDN------IPFGVMA 150
I I IP+Y + AN+LA P+ + + + AGL A L ++ I + A
Sbjct: 425 VILGIS--GKIPLYTIPANMLAAPLTA-ITMFAGLAAFLSYSINFTAITDIALILGRIPA 481
Query: 151 WGLDIII-HIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNI 197
G++ I + AH + + + VT+ V LL+ I
Sbjct: 482 QGIEYIAKYFAHAPANPLDVDVTPASVAFAGVTVFVGSLLIWLWDYRI 529
>gi|330891489|gb|EGH24150.1| DNA internalization-related competence protein ComEC/Rec2
[Pseudomonas syringae pv. mori str. 301020]
Length = 330
Score = 36.7 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 26/217 (11%), Positives = 69/217 (31%), Gaps = 14/217 (6%)
Query: 14 ETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKI 73
+L P+G P FD+ + I A G + + + +++
Sbjct: 120 GERWRMAVKLKRPAGLVNPDAFDYEAWLLAQRIGATGTVVDGQLLTPARGAWRDLIRQRL 179
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIA 133
++ A + + + + G + ++L I ++ + A
Sbjct: 180 LAVDAQGREGGLAALVLGDGSG---LSSTDWQVLQDTGTV-HLLVISGQHIGLLAGVIYA 235
Query: 134 ILLMILSLDNIPFGVMAWG-LDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVF 192
++ L A L +A ++ + +P +V +++
Sbjct: 236 LVA---GLARWGLWPRALPWLPWACALAFIAALGYGLLAGFEVPVRRACVMVA---MVLL 289
Query: 193 CKTNIRHIGSI---MIGITIIILFTFPYSFSPDLLIS 226
+ RH+G + ++ +++F + P +S
Sbjct: 290 WRLRFRHLGVVWPLLLSFNAVLIFEPLVTLQPGFWLS 326
>gi|300716084|ref|YP_003740887.1| competence-related protein [Erwinia billingiae Eb661]
gi|299061920|emb|CAX59036.1| Putative competence-related protein [Erwinia billingiae Eb661]
Length = 754
Score = 36.7 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 57/178 (32%), Gaps = 13/178 (7%)
Query: 104 FHCIPVYGLIANILAIPILSFV-VIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHR 162
FH I + L+ANI A+P+++F+ V L + L + L+ +
Sbjct: 383 FHGISISALLANIWAVPVVTFISVPLILAALAFLPLAPLSQAFWWFADRSLEAVFVPLAL 442
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
+ + +P ++ + + V R ++ + + + + P
Sbjct: 443 LPSGWLDMNRQALPISAAIWLTVIACRFC----WWRSSPMTVLSLGLALACWRLNNEEPK 498
Query: 223 L---LISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDLQEK 277
++ L ++ N Y S W P + + L+ K
Sbjct: 499 WRLDMLDIGHGLAVVISANGEALVYDTGNS-----WPGGDAAKSQIIPWLGWQGLKVK 551
>gi|21221026|ref|NP_626805.1| integral membrane protein [Streptomyces coelicolor A3(2)]
gi|6714673|emb|CAB66245.1| putative integral membrane protein [Streptomyces coelicolor A3(2)]
Length = 855
Score = 36.7 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 26/180 (14%), Positives = 50/180 (27%), Gaps = 12/180 (6%)
Query: 49 IGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP 108
G+ S+ W+ L E A G + A + + +
Sbjct: 415 YGFLLSVLATGALLTLAPRWSAALRRRRVPPRLAEALAAAGAAQALCAPVVAVLS-ARVS 473
Query: 109 VYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF-----GVMAWGLDIIIHIAHRI 163
+ G+ N+LA F V PA ++ + + +P W + I IA
Sbjct: 474 LVGVPCNLLA----EFAVAPATVLGFAALATAPAAMPLAKSLAWCGGWPAEWIAAIARTG 529
Query: 164 SVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDL 223
+ P + ++ + + R + +L P L
Sbjct: 530 AALPGAGV--DWPGSWAGAALLALVTVGVLLAGRRLLRHPWWCGACALLLILVVVQPPPL 587
>gi|193212454|ref|YP_001998407.1| ComEC/Rec2-related protein [Chlorobaculum parvum NCIB 8327]
gi|193085931|gb|ACF11207.1| ComEC/Rec2-related protein [Chlorobaculum parvum NCIB 8327]
Length = 728
Score = 36.7 bits (83), Expect = 6.6, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 54/162 (33%), Gaps = 12/162 (7%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPF 146
++ + + +F G+IAN +P++ F + + ++
Sbjct: 408 SVSLAAMIGIAPVIAWYFGTYAPSGIIAN---VPVVFFSSMAMYASFPMALLHGFGGGVA 464
Query: 147 GVMAWGLDIIIHIAHRISV-------AHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRH 199
+ + ++A A E F VV L + K R
Sbjct: 465 ELFGLSSWLFANVALWFVELFNRLPFASIEVHPDLFGVVVFYLTVVLALYALVSKAWGRL 524
Query: 200 IGSIMIGITIIIL--FTFPYSFSPDLLISEKGNLVALVDKNT 239
S++IG+ +++ P SP ++ G +AL+ +
Sbjct: 525 AVSVLIGLNLLLWHEVIRPVPDSPRMVTVNAGRDMALLLSSG 566
>gi|290968853|ref|ZP_06560390.1| ComEC/Rec2-like protein [Megasphaera genomosp. type_1 str. 28L]
gi|290781149|gb|EFD93740.1| ComEC/Rec2-like protein [Megasphaera genomosp. type_1 str. 28L]
Length = 706
Score = 36.7 bits (83), Expect = 6.7, Method: Composition-based stats.
Identities = 34/202 (16%), Positives = 69/202 (34%), Gaps = 11/202 (5%)
Query: 98 IFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILL----MILSLDNIPFGVMAWGL 153
++ F +PVY IAN+L P+L V++ GL +++ L +I + W L
Sbjct: 391 PLVLASFQALPVYSFIANLLVAPVLDLVIL-LGLGSVITGSIWTPLG--DIFLYPLQWLL 447
Query: 154 DIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
I ++ + VF K +I + + + +
Sbjct: 448 TWAIQGNACLAAFPYSRYWHGALSVTTAAAWYIAAGAVFLKKRQGYIAAGLSSVVWVSGQ 507
Query: 214 TFPYSFSPDLLI--SEKGNLVAL--VDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHV 269
+ P + + + G A+ V + + + N +F + S + P + +
Sbjct: 508 MVAWLTVPAITVYSFDFGRDSAVCAVTADNRVRLWYNKENFSSREDISYTVIPALQYEGI 567
Query: 270 QKEDLQEKNQSSLKEILRSMQP 291
D + K R + P
Sbjct: 568 FALDACTVSGKDTKNTARQLAP 589
>gi|301597092|ref|ZP_07242100.1| DNA internalization-related competence protein ComEC/Rec2
[Acinetobacter baumannii AB059]
Length = 522
Score = 36.7 bits (83), Expect = 6.8, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 80 FLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM-- 137
F++++ + S + F I + NI+A+PI+ V++P ++A
Sbjct: 408 FMSKVLIESQGKIFIALSPLTLLFFQQISWVAPLTNIIAVPIVGSVIVPLNIMAACAWFV 467
Query: 138 --ILS 140
Sbjct: 468 IKPFG 472
>gi|327539406|gb|EGF26022.1| DNA internalization-related competence protein ComEC/Rec2
[Rhodopirellula baltica WH47]
Length = 905
Score = 36.7 bits (83), Expect = 6.9, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 59/166 (35%), Gaps = 14/166 (8%)
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
W+++ S S+ + + A + FH + +I N++ P+++ + +
Sbjct: 478 AWRRLLSFCLSWTGRVL-WYSGAVTLMALPLVWSQFHVVSPISVIVNVMLSPLMA-LALS 535
Query: 129 AGLIAILL--MILSLDNIPFGVMAWGLDIIIHIAHRISVAHNE-FCIGRIPETSFVTIVV 185
AG++ IL + SL IP GV L I+ + + F + P V +
Sbjct: 536 AGVMTILAGWWLPSLAWIPGGVCGKLLSIMQWMIDSAATLSGGHFWLPSPPTIWIVVFYL 595
Query: 186 EFL-LMVF--------CKTNIRHIGSIMIGITIIILFTFPYSFSPD 222
+ + + G ++ I I + PD
Sbjct: 596 GLIAWAAIRPMVTSQGIRRRVIEAGLLVSWIGIAYGLATYPAELPD 641
>gi|329903716|ref|ZP_08273592.1| Putative DNA internalization-competence-like protein ComEC/Rec2
[Oxalobacteraceae bacterium IMCC9480]
gi|327548237|gb|EGF32936.1| Putative DNA internalization-competence-like protein ComEC/Rec2
[Oxalobacteraceae bacterium IMCC9480]
Length = 323
Score = 36.7 bits (83), Expect = 6.9, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 2/81 (2%)
Query: 161 HRISVAHNEFCIGRIPETS-FVTIVVEFLLMVFCKTN-IRHIGSIMIGITIIILFTFPYS 218
+S IP F + L + + +R G + L T P +
Sbjct: 2 AWLSGLSWAVWSAPIPSWWAFAAAAIGTLWWLAPRGWPVRWAGLAGWLPLLATLPTHPAA 61
Query: 219 FSPDLLISEKGNLVALVDKNT 239
D++ + G +AL+ +
Sbjct: 62 GQFDVIAFDVGQGMALLVETA 82
>gi|148263942|ref|YP_001230648.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacter uraniireducens Rf4]
gi|146397442|gb|ABQ26075.1| DNA internalization-related competence protein ComEC/Rec2
[Geobacter uraniireducens Rf4]
Length = 797
Score = 36.7 bits (83), Expect = 6.9, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD +F + ++ G P + + + +K+ + + ++ +
Sbjct: 352 LFDISFQLSF--LALWGILILTPLFMVPFTAVSNALLRKL----------LLFFMASFAA 399
Query: 94 ASASIF-LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLM 137
A++F + +FH + GLI+N + +P++ + + G A+ L+
Sbjct: 400 TIATLFPVAYYFHRVSFTGLISNFVVVPLMGYGAVVLGFSALPLI 444
>gi|194017691|ref|ZP_03056301.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
pumilus ATCC 7061]
gi|194010591|gb|EDW20163.1| DNA internalization-related competence protein ComEC/Rec2 [Bacillus
pumilus ATCC 7061]
Length = 775
Score = 36.7 bits (83), Expect = 7.0, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 21/185 (11%)
Query: 74 SSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVV----IPA 129
S++ Q FL A + ++ L+ HF + + N++ +P + VV +
Sbjct: 351 SAVMQLFLISFVAQL------ASLPVLLYHFQQFSLLSIPLNMIFVPFYTTVVLPLSLLF 404
Query: 130 GLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEF-----CIGRIPETSFVTIV 184
L++I+ + L V+ LD +I ++H++S F + + V
Sbjct: 405 FLLSIIYLPLG------QVLFQLLDSVIQLSHQLSAHMAVFDGFNLIFMKSTWWHILLEV 458
Query: 185 VEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNY 244
+ ++F + S + I ++I + F+P+ L + ++ + ++L
Sbjct: 459 SAIVFLLFVMECKMSVKSYAVPIILLIGVLSAHYFTPNFLQKGEVTMLDVGQGDSLFIQL 518
Query: 245 SNPPS 249
Sbjct: 519 PYRKG 523
>gi|73669276|ref|YP_305291.1| hypothetical protein Mbar_A1770 [Methanosarcina barkeri str.
Fusaro]
gi|72396438|gb|AAZ70711.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 525
Score = 36.7 bits (83), Expect = 7.1, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 64/178 (35%), Gaps = 19/178 (10%)
Query: 38 NFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASAS 97
F++ GI+A+G+F+S P+ I I+ I + S +
Sbjct: 315 TFAASLLGITALGFFFSRPRKIMDRFKTRNLV--LIALFGTVSFAAISLPMTILWDLSHA 372
Query: 98 IFLIKH------FHCIPVYGLIANILA-IP---ILSFVVI----PAGLIAILLMILSLDN 143
IF F+ I +Y LIA+++ IP ++S ++ G I ++
Sbjct: 373 IFGPFSFLFTGLFNEILLYMLIASLVVLIPKPGVISLFMMVRFLLGGFITGSFTPITF-- 430
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPET-SFVTIVVEFLLMVFCKTNIRHI 200
I + A L+ ++++A ++ F ++ ++ R
Sbjct: 431 ITLSINAIILEFLLYVAGVTGKNPAPDNRLKMGIICGFSDVISGYVSFSVWMVLYRLF 488
>gi|254786467|ref|YP_003073896.1| DNA internalization-related competence protein ComEC/Rec2
[Teredinibacter turnerae T7901]
gi|237687255|gb|ACR14519.1| DNA internalization-related competence protein ComEC/Rec2
[Teredinibacter turnerae T7901]
Length = 785
Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats.
Identities = 36/216 (16%), Positives = 66/216 (30%), Gaps = 10/216 (4%)
Query: 11 FPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTW 70
+ RL P G PG FD+ + ISA GY YS ++ + H
Sbjct: 144 LSPGENWQAKVRLRRPRGSVNPGGFDYQAWLLSRKISATGYVYSQAGVVQLEQRHEWPGK 203
Query: 71 KKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP--VYGLI-----ANILAIPILS 123
+ +Q+ + N + LI I + ++ +++AI L
Sbjct: 204 WGVQRARQTLARVLFDNWASPQIGLLRALLIGDQSAITQDQWDVLRATGTVHLMAISGLH 263
Query: 124 FVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
++ AI + G+ + + G T I
Sbjct: 264 IGLMATIGFAIGA---GFARVLAVYRPAGVTWLAPVFANAFAFFYAALAGFEIPTQRACI 320
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
+V +V + + I I +L P++
Sbjct: 321 MVFCFSLVAWRGRQVNFWLIYSFALIGVLAIDPFAP 356
>gi|227826783|ref|YP_002828562.1| major facilitator superfamily MFS_1 [Sulfolobus islandicus M.14.25]
gi|229583964|ref|YP_002842465.1| major facilitator superfamily MFS_1 [Sulfolobus islandicus M.16.27]
gi|227458578|gb|ACP37264.1| major facilitator superfamily MFS_1 [Sulfolobus islandicus M.14.25]
gi|228019013|gb|ACP54420.1| major facilitator superfamily MFS_1 [Sulfolobus islandicus M.16.27]
Length = 378
Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 42/107 (39%), Gaps = 5/107 (4%)
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIII-----HIAHRISVAHNEFCIGRIPETS 179
+V LI L S I ++ G++ I +I+ +S +G + +
Sbjct: 77 LVSLGSLIGFLSQTFSWIIIAEFIIGLGIEGEISVVPTYISETVSAERRGRAVGLVTASG 136
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
F+T ++ + V R + + +++I L T + + I+
Sbjct: 137 FLTTLIVGPIAVVLGGEWRLLFLAGLLVSLIALITRVWLPESPMWIA 183
>gi|220904315|ref|YP_002479627.1| hypothetical protein Ddes_1042 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868614|gb|ACL48949.1| protein of unknown function UPF0118 [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 368
Score = 36.7 bits (83), Expect = 7.3, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 43/133 (32%), Gaps = 11/133 (8%)
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPI 121
S+S I + + I G F + + +GL+A ++A
Sbjct: 210 SQSMLRRFITAIHRALRGIMLGIVLVALAQGFLCGVAFAVAGVNQPAFWGLLATLVA--- 266
Query: 122 LSFVVIPAGLIAILLMILSLDNIP----FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE 177
IP A++ + L + + GL ++ +A +V F I
Sbjct: 267 ----PIPMVGTALVWLPLCISLWFTGKSMAAIGLGLWGMLAVAGVDNVLRPLFLRQGIKA 322
Query: 178 TSFVTIVVEFLLM 190
FV I+ +
Sbjct: 323 PFFVLIIAILCGL 335
>gi|325267925|ref|ZP_08134574.1| apolipoprotein N-acyltransferase [Kingella denitrificans ATCC
33394]
gi|324980611|gb|EGC16274.1| apolipoprotein N-acyltransferase [Kingella denitrificans ATCC
33394]
Length = 532
Score = 36.3 bits (82), Expect = 7.5, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 37/108 (34%), Gaps = 11/108 (10%)
Query: 120 PILSFVVIPAGLIAILLMI------LSLDNIPFGVMAWG--LDIIIHIAHRISVAHNEFC 171
P F ++P A++ + + L F ++A+ I H +S N F
Sbjct: 47 PYYHFWLMPLLFGALIRLAELKPKHMVLSAYLFWLVAYSSQFWWIHTAMHDVSGLDNVFA 106
Query: 172 IGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF 219
+ V + L + R GS + + +++ + +
Sbjct: 107 VPLTFLMPAVLALYPALAFALWR---RFSGSRTLRVGVVLPMLWTLAE 151
>gi|32476106|ref|NP_869100.1| competence protein ComEC/Rec2 [Rhodopirellula baltica SH 1]
gi|32446650|emb|CAD76486.1| probable competence protein ComEC/Rec2 [Rhodopirellula baltica SH
1]
Length = 869
Score = 36.3 bits (82), Expect = 7.5, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 14/166 (8%)
Query: 69 TWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIP 128
W+++ S S+ + + A + FH + +I N++ P+++ + +
Sbjct: 442 AWRRLFSFCLSWTGRVL-WYSGAVTLMALPLVWSQFHVVSPISVIVNVMLSPLMA-LALS 499
Query: 129 AGLIAILL--MILSLDNIPFGVMAWGLDIIIH-IAHRISVAHNEFCIGRIPETSFVTIVV 185
AG++ IL + SL IP GV L I+ I ++ F + P V +
Sbjct: 500 AGVMTILAGWWLPSLAWIPGGVCGKLLSIMQWMIDSAATLPGGHFWLPSPPTIWIVVFYL 559
Query: 186 EFLL------MVFCKTNIRH---IGSIMIGITIIILFTFPYSFSPD 222
+ MV + R G ++ I I + PD
Sbjct: 560 GLIAWAAIRPMVTSQGIRRLVIEAGLLVSWIGIAYGLATYLAELPD 605
>gi|258651750|ref|YP_003200906.1| DNA internalization-related competence protein ComEC/Rec2
[Nakamurella multipartita DSM 44233]
gi|258554975|gb|ACV77917.1| DNA internalization-related competence protein ComEC/Rec2
[Nakamurella multipartita DSM 44233]
Length = 790
Score = 36.3 bits (82), Expect = 7.6, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 50/163 (30%), Gaps = 10/163 (6%)
Query: 41 SYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFL 100
+ G + + ++ S + + A + T
Sbjct: 348 ALSAGFALSVLATAGLVLLAPLWSGVLQRRGVPAGWADLLAIPVAAQVVTMPVIVLISGA 407
Query: 101 IKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLD--NIPFGVMAWGLDIIIH 158
I V G+ AN+L P++ ++ G++A L D + A L+ I
Sbjct: 408 ------ISVVGVPANLLVAPVVGPALM-LGMLAALTGPWWPDGAAFFAQLAAPLLNWIGW 460
Query: 159 IAHRISVAHNEFCI-GRIPETSFVTIVVEFLLMVFCKTNIRHI 200
+AH ++ P + V + V ++ + +
Sbjct: 461 VAHTLARWPTATVPWPATPVGAAVLVGVTVGAVLVLRRRWGRL 503
>gi|226939573|ref|YP_002794646.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Laribacter hongkongensis HLHK9]
gi|226714499|gb|ACO73637.1| ComEC/Rec2-related protein:DNA internalization-related competence
protein ComEC/Rec2 [Laribacter hongkongensis HLHK9]
Length = 754
Score = 36.3 bits (82), Expect = 7.6, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 52/126 (41%), Gaps = 10/126 (7%)
Query: 96 ASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
+ L+ F +P+ +AN+ A P+L + A L+ +L + + ++ L+
Sbjct: 376 SVPLLLAWFGSLPLLSPLANLYAAPVLGGALTLASLLVLLQPFDAPLQLVAWLLGLALEP 435
Query: 156 IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+ +A A ++ I + V ++ +LMV ++R + + + +
Sbjct: 436 LRWLA-----AGPQWQIPAPAGWAVVLALLGSVLMVLPSWSLR-----GLAACLWLPLLW 485
Query: 216 PYSFSP 221
P + P
Sbjct: 486 PVTERP 491
>gi|325108361|ref|YP_004269429.1| ComEC/Rec2-related protein [Planctomyces brasiliensis DSM 5305]
gi|324968629|gb|ADY59407.1| ComEC/Rec2-related protein [Planctomyces brasiliensis DSM 5305]
Length = 835
Score = 36.3 bits (82), Expect = 7.7, Method: Composition-based stats.
Identities = 26/195 (13%), Positives = 69/195 (35%), Gaps = 13/195 (6%)
Query: 34 LFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGS 93
LFD + + I ++ + ++ S +Q + R ++G +
Sbjct: 371 LFDTGTHLSFLAVGTILILMTMRPLP-GPWDSVDQEEQQTSWWRQEAVTAFRLSVGI--T 427
Query: 94 ASASIFLIKHFHCIPVYGLIANILAIP-ILSFVVIPAGLIAILLMILSLDNIPFGVM-AW 151
FH + + G+ +LA+P +++ +++ + + L++ ++ W
Sbjct: 428 VVLLPLFGHVFHRVALAGIPGTVLALPLLMAVMLMLGMHLLWSTLCLAIAAPSAALLTGW 487
Query: 152 GLDIIIH----IAHRISVAHNEFCIGRIPETSFVTI--VVEFLLMVFC--KTNIRHIGSI 203
++ +A S R P + + + L + + +R +I
Sbjct: 488 PTAFLLSCLSDLAAWFSSVQLLNWFSRRPSAAILLLLYTSAGLALYWWGRTRPLRPRWAI 547
Query: 204 MIGITIIILFTFPYS 218
+++LF P +
Sbjct: 548 GWTAIVLLLFEMPLT 562
>gi|227829425|ref|YP_002831204.1| major facilitator superfamily MFS_1 [Sulfolobus islandicus
L.S.2.15]
gi|284996805|ref|YP_003418572.1| major facilitator superfamily MFS_1 [Sulfolobus islandicus L.D.8.5]
gi|227455872|gb|ACP34559.1| major facilitator superfamily MFS_1 [Sulfolobus islandicus
L.S.2.15]
gi|284444700|gb|ADB86202.1| major facilitator superfamily MFS_1 [Sulfolobus islandicus L.D.8.5]
Length = 378
Score = 36.3 bits (82), Expect = 7.8, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 42/107 (39%), Gaps = 5/107 (4%)
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIII-----HIAHRISVAHNEFCIGRIPETS 179
+V LI L S I ++ G++ I +I+ +S +G + +
Sbjct: 77 LVSLGSLIGFLSQTFSWIIIAEFIIGLGIEGEISVVPTYISETVSAERRGRAVGLVTASG 136
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
F+T ++ + V R + + +++I L T + + I+
Sbjct: 137 FLTTLIVGPIAVVLGGEWRLLFLAGLLVSLIALITRVWLPESPMWIA 183
>gi|260061702|ref|YP_003194782.1| putative competence related membrane protein [Robiginitalea
biformata HTCC2501]
gi|88785834|gb|EAR17003.1| putative competence related membrane protein [Robiginitalea
biformata HTCC2501]
Length = 663
Score = 36.3 bits (82), Expect = 7.8, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 39/138 (28%), Gaps = 16/138 (11%)
Query: 31 FPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGT 90
F F +F + + +S + Y +W + + +
Sbjct: 339 FQAGFQMSFLAVWAILSLYPWLY--------------RSWPVKRGAGRKIGQLLC--VSG 382
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMA 150
+ +FH P ++N+L IP++ V+ L+ L L +
Sbjct: 383 AAQLGVLPLSLYYFHQFPALFWLSNLLLIPVMGVVLASGFLLLGLASYSPLPDWVAWGAD 442
Query: 151 WGLDIIIHIAHRISVAHN 168
+ + +
Sbjct: 443 RFFGLFNGVVRWVGGQEG 460
>gi|153000194|ref|YP_001365875.1| DNA internalization-like competence protein ComEC/Rec2 [Shewanella
baltica OS185]
gi|151364812|gb|ABS07812.1| DNA internalization-related competence protein ComEC/Rec2
[Shewanella baltica OS185]
Length = 795
Score = 36.3 bits (82), Expect = 7.9, Method: Composition-based stats.
Identities = 38/233 (16%), Positives = 74/233 (31%), Gaps = 30/233 (12%)
Query: 39 FSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASI 98
F + + I Y I ++ S + + + +G +A
Sbjct: 325 FWLSFCALGIILYTLEIQPREFTPASTRRARLRTGMMQFWAIQWRLSLGLGLLQAAL--- 381
Query: 99 FLIKHFHCIPVYGLIANILAIPILSFVVIPAGLI---------AILLMILSLDNIP-FGV 148
F + V+ L NILA+P SFVVIP + A+ L L ++ +
Sbjct: 382 -----FGGVSVHSLWMNILAVPWFSFVVIPLAMAGFVCWWLGTALGLSHFGLSSLGVLRL 436
Query: 149 MAWGLDI---IIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL--------MVFCKTNI 197
W L ++ I+ ++ H + F +V L + + +
Sbjct: 437 SDWSLSPYAQLLDISQQLPA-HWLALSDSLLALGFCALVGGVLWHYVPKYKHYIAWLSLL 495
Query: 198 RHIGSIMIGITIIILFTFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSF 250
+ + + + F L+ L +++KN Y +F
Sbjct: 496 SLLFMPTLLFCMTLWFPVQTHRWTMHLLDVGQGLAVVIEKNGKGFIYDTGAAF 548
>gi|139439597|ref|ZP_01773010.1| Hypothetical protein COLAER_02037 [Collinsella aerofaciens ATCC
25986]
gi|133774938|gb|EBA38758.1| Hypothetical protein COLAER_02037 [Collinsella aerofaciens ATCC
25986]
Length = 459
Score = 36.3 bits (82), Expect = 8.1, Method: Composition-based stats.
Identities = 18/162 (11%), Positives = 51/162 (31%), Gaps = 13/162 (8%)
Query: 87 NIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI-- 144
++ + I F + +AN + P++S ++ ++I+L+ SL
Sbjct: 76 SVTLCSQLATLPITIPAFGTFSLIAPLANAVIGPVVSVLL----AVSIVLVPFSLVAPLR 131
Query: 145 --PFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETS--FVTIVVEFLLMVFCKTNIRHI 200
V + + V ++ LL+ + + R +
Sbjct: 132 TWALVVPMIAARCALFFERLFAAVPGASVSVPPDSMWIYLVPCLLAVLLVRWPRPRARPM 191
Query: 201 GSIMIGITIIIL---FTFPYSFSPDLLISEKGNLVALVDKNT 239
+ + ++ + P + + + G A++ +
Sbjct: 192 AVGLACLVLLAAIPYVYWDRFAPPSVTVLDVGQADAILIRQG 233
>gi|238618903|ref|YP_002913728.1| major facilitator superfamily MFS_1 [Sulfolobus islandicus M.16.4]
gi|238379972|gb|ACR41060.1| major facilitator superfamily MFS_1 [Sulfolobus islandicus M.16.4]
gi|323477109|gb|ADX82347.1| major facilitator superfamily MFS_1 [Sulfolobus islandicus HVE10/4]
Length = 378
Score = 36.3 bits (82), Expect = 8.2, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 45/112 (40%), Gaps = 6/112 (5%)
Query: 121 ILSFVVIPAG-LIAILLMILSLDNIPFGVMAWGLDIII-----HIAHRISVAHNEFCIGR 174
+ S ++ G LI L S I ++ G++ I +I+ +S +G
Sbjct: 72 LTSMGLVSLGSLIGFLSQTFSWIIIAEFIIGLGIEGEISVVPTYISETVSAERRGRAVGL 131
Query: 175 IPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
+ + F+T ++ + V R + + +++I L T + + I+
Sbjct: 132 VTASGFLTTLIVGPIAVVLGGEWRLLFLAGLLVSLIALITRVWLPESPMWIA 183
>gi|253574667|ref|ZP_04852007.1| DNA internalization-related competence protein ComEC/Rec2
[Paenibacillus sp. oral taxon 786 str. D14]
gi|251845713|gb|EES73721.1| DNA internalization-related competence protein ComEC/Rec2
[Paenibacillus sp. oral taxon 786 str. D14]
Length = 932
Score = 36.3 bits (82), Expect = 8.3, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 43/126 (34%), Gaps = 3/126 (2%)
Query: 86 ANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMI--LSLDN 143
I + I +F+ + AN+L +P++ + +P G A+LL + + L
Sbjct: 416 VAITLAAQLVSFPLTIFYFNQFSFLSIPANLLLVPLIGTLALPLGTGALLLGLLSIKLGA 475
Query: 144 IPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPE-TSFVTIVVEFLLMVFCKTNIRHIGS 202
+ W + + +S + P L+V+ + +
Sbjct: 476 WAALPVRWLNEATFAATNWLSARSGFMTYWKSPSLLWIAAFYAGCYLLVYWGHRRERLAA 535
Query: 203 IMIGIT 208
+ ++
Sbjct: 536 EALAVS 541
>gi|323473880|gb|ADX84486.1| major facilitator superfamily MFS_1 [Sulfolobus islandicus REY15A]
Length = 378
Score = 36.3 bits (82), Expect = 8.4, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 42/107 (39%), Gaps = 5/107 (4%)
Query: 125 VVIPAGLIAILLMILSLDNIPFGVMAWGLDIII-----HIAHRISVAHNEFCIGRIPETS 179
+V LI L S I ++ G++ I +I+ +S +G + +
Sbjct: 77 LVSLGSLIGFLSQTFSWIIIAEFIIGLGIEGEISVVPTYISETVSAERRGRAVGLVTASG 136
Query: 180 FVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPDLLIS 226
F+T ++ + V R + + +++I L T + + I+
Sbjct: 137 FLTTLIVGPIAVVLGGEWRLLFLAGLLVSLIALITRVWLPESPMWIA 183
>gi|254431897|ref|ZP_05045600.1| DNA internalization competence protein, ComEC/Rec2 family protein
[Cyanobium sp. PCC 7001]
gi|197626350|gb|EDY38909.1| DNA internalization competence protein, ComEC/Rec2 family protein
[Cyanobium sp. PCC 7001]
Length = 461
Score = 36.3 bits (82), Expect = 8.4, Method: Composition-based stats.
Identities = 34/257 (13%), Positives = 76/257 (29%), Gaps = 14/257 (5%)
Query: 49 IGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRAN--IGTYGSASASIFLIKHFHC 106
+G+ S+ + + Q + A+ + S + HF
Sbjct: 83 VGFQLSVVATAALVVAAPPLEQALRQRLPQRCPAWLAASMAVPLAASLWTLPLQLFHFGV 142
Query: 107 IPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP-FGVMAWGLDIIIHIAHRISV 165
+P+Y + AN+L P+L+ + + A +A+L +L +AW +++ I ++
Sbjct: 143 VPLYAVPANLLVAPLLTPLTLGAMGMALLAALLPGLIPVLLPPVAWLGGVVLGIVKAVAA 202
Query: 166 AHNE---FCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSF--- 219
+ + + + + R + ++ + +
Sbjct: 203 LPLAQWQLGRPTPLLVLLLALALGSIGLSGLPRWWRRLAPGLLMLATLGHLALLRGDQLV 262
Query: 220 -----SPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKEDL 274
DLL++ ALV + S + P E
Sbjct: 263 LVHQGQRDLLLARHQGRAALVSTQADGLSCSRARQLATGFGVARFDWVLVLDPLAAAEPA 322
Query: 275 QEKNQSSLKEILRSMQP 291
+ Q+ L P
Sbjct: 323 CWQAQAGLVLASEDGSP 339
>gi|156399606|ref|XP_001638592.1| predicted protein [Nematostella vectensis]
gi|156225714|gb|EDO46529.1| predicted protein [Nematostella vectensis]
Length = 442
Score = 36.3 bits (82), Expect = 8.4, Method: Composition-based stats.
Identities = 20/152 (13%), Positives = 47/152 (30%), Gaps = 6/152 (3%)
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSF- 124
W ++ + SF G + ++ + V G + L IP+++
Sbjct: 66 MGWNKRESGLVLSSFFWGYLI-TQIPGGFLSDVYGAERLLLWAVTGCSLSTLVIPLVASQ 124
Query: 125 -VVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
V P L+ I + L + + L ++ + IS + +
Sbjct: 125 KVTSPITLVLISRLALGVFQGIYYP---SLYSLLAKSLPISERSSCSAFALAGGPVGSLV 181
Query: 184 VVEFLLMVFCKTNIRHIGSIMIGITIIILFTF 215
+ +V + R + I ++ +
Sbjct: 182 IGGLGSLVLARCGWRWVFLSFGSIGLLWAVLW 213
>gi|289805040|ref|ZP_06535669.1| hypothetical protein Salmonellaentericaenterica_11497 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 83
Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 104 FHCIPVYGLIANILAIPILSFVVIPAGLIAILL---MILSLDNIPFGV 148
FH I V ++AN+ A+P ++FV +P L ++L L+ + +
Sbjct: 32 FHGISVTAMLANLFAVPWVTFVTVPLILAGMILHLTGPFFLEEWVWYL 79
>gi|156400710|ref|XP_001638935.1| predicted protein [Nematostella vectensis]
gi|156226060|gb|EDO46872.1| predicted protein [Nematostella vectensis]
Length = 1822
Score = 36.3 bits (82), Expect = 8.7, Method: Composition-based stats.
Identities = 12/99 (12%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Query: 116 ILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRI 175
++ + + + ++ GL + L+ L L + + G + + +++ + +
Sbjct: 1596 LVTLGLCTLSLVTLGLCTLSLVTLGLCTLSLVTLGLG-TLTLVPLSLVTLGLGTLSLVTL 1654
Query: 176 PETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFT 214
+ + + + + ++ IG + +G+ +IL T
Sbjct: 1655 GLGTLSLVTLGLVTLSLVTLSLVTIGLVTLGLGTLILVT 1693
Score = 36.3 bits (82), Expect = 9.0, Method: Composition-based stats.
Identities = 17/140 (12%), Positives = 54/140 (38%), Gaps = 21/140 (15%)
Query: 76 IKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIA-NILAIPILSFVVIPAGLIAI 134
+ L+ + ++ T G + + + + GL+ +++ + +++ ++ GL +
Sbjct: 1664 LGLVTLSLVTLSLVTIGLVTLGLGTL----ILVTLGLVTLSLVKLSLVTIGLVTLGLGTL 1719
Query: 135 LLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLLMVFCK 194
L+ L L + + G + + + + + + + + K
Sbjct: 1720 SLVTLGLGTLGLVTLGLGT----------------LSLVTLGLGTLILVTLGLVTLSLVK 1763
Query: 195 TNIRHIGSIMIGITIIILFT 214
++ IG + +G+ + L T
Sbjct: 1764 LSLVTIGLVTLGLGTLSLVT 1783
>gi|312140321|ref|YP_004007657.1| DNA internalization competence protein comec/rec2 [Rhodococcus equi
103S]
gi|311889660|emb|CBH48977.1| putative DNA internalization competence protein ComEC/Rec2
[Rhodococcus equi 103S]
Length = 792
Score = 36.3 bits (82), Expect = 8.8, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 48/145 (33%), Gaps = 2/145 (1%)
Query: 49 IGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP 108
G+ S+ + + +L E+ A + + + +
Sbjct: 352 FGFALSVFATAGLVVVSPALVARLRARGWPRWLAEMCA-VALAAFVVTAPLVAAMSGTVS 410
Query: 109 VYGLIANILAIPILSFVVIPAGLIAILLMI-LSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
+ ++AN+L P ++ + + A+L ++ L + V L ++ +A R +
Sbjct: 411 IVSIVANVLVAPAVAPITVVGAATAVLAVVWLPAAALLVRVAGPPLWWLLEVADRAAAVP 470
Query: 168 NEFCIGRIPETSFVTIVVEFLLMVF 192
R V + V + V
Sbjct: 471 GGNLAVRNGLGGAVIVAVGIAVAVL 495
>gi|85711274|ref|ZP_01042333.1| DNA uptake-related membrane-associated competence protein
[Idiomarina baltica OS145]
gi|85694775|gb|EAQ32714.1| DNA uptake-related membrane-associated competence protein
[Idiomarina baltica OS145]
Length = 770
Score = 36.3 bits (82), Expect = 8.8, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 37/112 (33%), Gaps = 3/112 (2%)
Query: 68 WTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVI 127
W+W+ S + + F + + +N+ +PI++ V+
Sbjct: 361 WSWRNKPSASWVTRIWQTFYLQLLFLTLMGPISLALFDGVSLIAPFSNLFVVPIIAIWVL 420
Query: 128 PAGLIAILLMILSLDNIP---FGVMAWGLDIIIHIAHRISVAHNEFCIGRIP 176
P L+ + + D+ + + L I + ++ + +P
Sbjct: 421 PLTLLGAIAAMCWSDSFAANLWWLAEQPLIAIQPLLTTLADVPLVWFSSTLP 472
>gi|325911377|ref|ZP_08173789.1| glycosyltransferase, group 4 family [Lactobacillus iners UPII
143-D]
gi|325476727|gb|EGC79881.1| glycosyltransferase, group 4 family [Lactobacillus iners UPII
143-D]
Length = 378
Score = 36.3 bits (82), Expect = 8.9, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 44/124 (35%), Gaps = 19/124 (15%)
Query: 109 VYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
+ G+ N +++P +S ++L + + I+ + + +++
Sbjct: 115 LAGIRVNEISLPFMS--------------PINLSWWSLPITVF---WILALTNAVNLIDG 157
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD-LLISE 227
+ + + + F ++ + I + +L PY+F P + + +
Sbjct: 158 LDGLAT-GVSMISLSTMGIVGFFFLHGWQNYVPLMCIMLATCLLGFLPYNFHPAKIFLGD 216
Query: 228 KGNL 231
G L
Sbjct: 217 TGAL 220
>gi|312874376|ref|ZP_07734407.1| glycosyltransferase, group 4 family [Lactobacillus iners LEAF
2052A-d]
gi|311090142|gb|EFQ48555.1| glycosyltransferase, group 4 family [Lactobacillus iners LEAF
2052A-d]
Length = 378
Score = 36.3 bits (82), Expect = 8.9, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 44/124 (35%), Gaps = 19/124 (15%)
Query: 109 VYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
+ G+ N +++P +S ++L + + I+ + + +++
Sbjct: 115 LAGIRVNEISLPFMS--------------PINLSWWSLPITVF---WILALTNAVNLIDG 157
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD-LLISE 227
+ + + + F ++ + I + +L PY+F P + + +
Sbjct: 158 LDGLAT-GVSMISLSTMGIVGFFFLHGWQNYVPLMCIMLATCLLGFLPYNFHPAKIFLGD 216
Query: 228 KGNL 231
G L
Sbjct: 217 TGAL 220
>gi|309806957|ref|ZP_07700939.1| glycosyltransferase, group 4 family [Lactobacillus iners LactinV
03V1-b]
gi|329920359|ref|ZP_08277091.1| glycosyltransferase, group 4 family [Lactobacillus iners SPIN
1401G]
gi|308166577|gb|EFO68774.1| glycosyltransferase, group 4 family [Lactobacillus iners LactinV
03V1-b]
gi|328936035|gb|EGG32488.1| glycosyltransferase, group 4 family [Lactobacillus iners SPIN
1401G]
Length = 378
Score = 36.3 bits (82), Expect = 8.9, Method: Composition-based stats.
Identities = 15/124 (12%), Positives = 44/124 (35%), Gaps = 19/124 (15%)
Query: 109 VYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDIIIHIAHRISVAHN 168
+ G+ N +++P +S ++L + + I+ + + +++
Sbjct: 115 LAGIRVNEISLPFMS--------------PINLSWWSLPITVF---WILALTNAVNLIDG 157
Query: 169 EFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILFTFPYSFSPD-LLISE 227
+ + + + F ++ + I + +L PY+F P + + +
Sbjct: 158 LDGLAT-GVSMISLSTMGIVGFFFLHGWQNYVPLMCIMLATCLLGFLPYNFHPAKIFLGD 216
Query: 228 KGNL 231
G L
Sbjct: 217 TGAL 220
>gi|302344442|ref|YP_003808971.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfarculus baarsii DSM 2075]
gi|301641055|gb|ADK86377.1| DNA internalization-related competence protein ComEC/Rec2
[Desulfarculus baarsii DSM 2075]
Length = 794
Score = 36.3 bits (82), Expect = 9.0, Method: Composition-based stats.
Identities = 35/221 (15%), Positives = 70/221 (31%), Gaps = 14/221 (6%)
Query: 6 KKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESH 65
++YDP I P P F +F + + A + +
Sbjct: 314 RRYDPLGGLALAALIIVGLWPEAP-LDLSFQLSFLAVGAILLAAAPLARWARALGRRSGR 372
Query: 66 NTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFV 125
W ++ + + ++HFH P+ L AN L IP+++ +
Sbjct: 373 MGWALGGLAGWL---------CLSAVVGLAVMPLGLRHFHVAPLLYLPANALLIPLVAML 423
Query: 126 VIPAGLIAILLMIL--SLDNIPFGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTI 183
+P L L +L + + + D IA + P + +
Sbjct: 424 ALPLALAGAGLGLLWPAAGLWLWRLALLPADWACDIALAWAAMPWAAWFTAGPSVEVLVL 483
Query: 184 VVE-FLLMVFCKTNIR-HIGSIMIGITIIILFTFPYSFSPD 222
+ L M+ + R +G + +I+ + +PD
Sbjct: 484 LHGAALAMIALRGRGRLWLGGALSVAVLIVGALQAWPPAPD 524
>gi|86131515|ref|ZP_01050113.1| competence protein [Dokdonia donghaensis MED134]
gi|85817960|gb|EAQ39128.1| competence protein [Dokdonia donghaensis MED134]
Length = 674
Score = 36.3 bits (82), Expect = 9.0, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 69/192 (35%), Gaps = 19/192 (9%)
Query: 35 FDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSA 94
+ F Y + AI + + + S S + +K ++ I A +G
Sbjct: 350 YQVGFQLSYLAVIAILW---VQPWLASFWSPEVFILRK---LRDVVSVTIAAQLGVM--- 400
Query: 95 SASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLD 154
+ +FH P +I+N+L IP L ++ ++ L + L +D
Sbjct: 401 ---PLSLFYFHQFPGLFIISNVLIIPFLGLILGGGLIVCFLSVTDLLPEFIVQSYGGIID 457
Query: 155 IIIHIAHRISVAHNEFCIGRIPETSFVTIVVEF-----LLMVFCKTNIRHIGSIMIGITI 209
++ + ++ +F I ++ + I+V LL+ + R I + I
Sbjct: 458 VMNNYIAWVAGQE-DFVARHISVSATLMILVYMFMITTLLLCMKYSKRRLI-VASLATII 515
Query: 210 IILFTFPYSFSP 221
+ F + P
Sbjct: 516 LTGFIVLENNQP 527
>gi|325677103|ref|ZP_08156772.1| ComEC operon protein [Rhodococcus equi ATCC 33707]
gi|325552088|gb|EGD21781.1| ComEC operon protein [Rhodococcus equi ATCC 33707]
Length = 792
Score = 36.3 bits (82), Expect = 9.1, Method: Composition-based stats.
Identities = 20/145 (13%), Positives = 48/145 (33%), Gaps = 2/145 (1%)
Query: 49 IGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIP 108
G+ S+ + + +L E+ A + + + +
Sbjct: 352 FGFALSVFATAGLVVVSPALVARLRARGWPRWLAEMCA-VALAAFVVTAPLVAAMSGTVS 410
Query: 109 VYGLIANILAIPILSFVVIPAGLIAILLMI-LSLDNIPFGVMAWGLDIIIHIAHRISVAH 167
+ ++AN+L P ++ + + A+L ++ L + V L ++ +A R +
Sbjct: 411 IVSIVANVLVAPAVAPITVVGAATAVLAVVWLPAAALLVRVAGPPLWWLLEVADRAAAVP 470
Query: 168 NEFCIGRIPETSFVTIVVEFLLMVF 192
R V + V + V
Sbjct: 471 GGNLAVRNGLGGAVIVAVGIAVAVL 495
>gi|293189680|ref|ZP_06608397.1| putative integral membrane protein [Actinomyces odontolyticus
F0309]
gi|292821418|gb|EFF80360.1| putative integral membrane protein [Actinomyces odontolyticus
F0309]
Length = 507
Score = 36.3 bits (82), Expect = 9.1, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 45/121 (37%), Gaps = 6/121 (4%)
Query: 88 IGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSL--DNIP 145
+ + + + ++ +PV+G+ AN+LA P + + AGL+ L+ LS+ +
Sbjct: 384 VPAFAELATAPIIVSLSGNVPVWGIAANVLAEPAVPVATV-AGLLGALISPLSIRAASAC 442
Query: 146 FGVMAWGLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVV--EFLLMVFCKTNIRHIGSI 203
V +W I A + ++ + + + + R I
Sbjct: 443 AVVASWATAWIAGAARVCASLPGNGVRVPGGSSTILGVYACCGGGWVA-WRAWKRWGAPI 501
Query: 204 M 204
+
Sbjct: 502 V 502
>gi|226307257|ref|YP_002767217.1| hypothetical protein RER_37700 [Rhodococcus erythropolis PR4]
gi|226186374|dbj|BAH34478.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
Length = 786
Score = 36.3 bits (82), Expect = 9.1, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 40/119 (33%), Gaps = 5/119 (4%)
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNI 144
+ + ++ + V + AN+ P++ + + +IA+ +I +
Sbjct: 381 MTAVSSAAFVVSAPLVGAMAGTFSVVTIAANMAVAPVIGIITVLGAVIALCALICPPIAV 440
Query: 145 PFGVMAW-GLDIIIHIAHRISVAHNEFCIGRIPETSFVTIVVEFLL---MVFCKTNIRH 199
+ + +++++ R + + P IVV LL + R
Sbjct: 441 FITPLVRPPMGWLLYVSERAAALPGASVVVP-PGLIGALIVVGVLLAAALTLWNRISRW 498
>gi|238763880|ref|ZP_04624837.1| Membrane protein, suppressor for copper-sensitivity B [Yersinia
kristensenii ATCC 33638]
gi|238697848|gb|EEP90608.1| Membrane protein, suppressor for copper-sensitivity B [Yersinia
kristensenii ATCC 33638]
Length = 670
Score = 36.3 bits (82), Expect = 9.5, Method: Composition-based stats.
Identities = 38/291 (13%), Positives = 93/291 (31%), Gaps = 34/291 (11%)
Query: 100 LIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI-IIH 158
++ HF + L+A + P L + L L + G+ + +
Sbjct: 393 MVGHFGQGALATLLATPCSAPFLG-----TAVAFALAAPLPALWGILTALGVGMSLPWLA 447
Query: 159 IAHRISVA-----HNEFCIGRIPETSFVTIVVEFLLMVFCKTNIRHIGSIMIGITIIILF 213
+A +A + + +V L+ ++I I+I +++
Sbjct: 448 VAAWPKLALCLPRPGRWMNHLRIAMGVLMLVSSLWLLSLMVSHIGLQAVIIIAGIVLLAL 507
Query: 214 TFPYSFSPDLLISEKGNLVALVDKNTLISNYSNPPSFIFSQWKSALITPFHEAPHVQKED 273
+ I+ +L+A++ L+ + W+ L
Sbjct: 508 LLAIGWRYGTRIAAIVSLIAVLIVGGLLLAGA----LTADLWRKPL----------HDNI 553
Query: 274 LQEKNQSSLKEILRSMQPRKFLCIKKSFCVGCHRSDVIVGVLKRKDMIRLSCQLSDILIT 333
+ S + + R F+ + +CV C + + V + +D ++ + Q D +
Sbjct: 554 PWQPLTESAIQKALAEDKRVFVDVTADWCVTCKVNKIHVLM---RDDVQQALQAPD--VV 608
Query: 334 TIRDINTKLCNVSLLITPEILQKQGSLEITIIPPSNDNDKVKFIIKSAIEN 384
+R T+ L+++GS+ I ++ ++
Sbjct: 609 ALRGDWTRPSANITAF----LRERGSVAIPFNQIYGPQQPQGVVLSPLLDR 655
>gi|326472484|gb|EGD96493.1| transcriptional repressor TUP1 [Trichophyton tonsurans CBS 112818]
gi|326481707|gb|EGE05717.1| transcriptional repressor rco-1 [Trichophyton equinum CBS 127.97]
Length = 592
Score = 35.9 bits (81), Expect = 9.7, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 28/94 (29%)
Query: 25 PPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEI 84
PP+ P F+ Y +G + G + P S + + ++
Sbjct: 152 PPNAQGPPQPPQGAFAGYQQGSAVNGSAFGPPAPTASPGPGKGRNARAPAGPATPQQSQQ 211
Query: 85 RANIGTYGSASASIFLIKHFHCIPVYGLIANILA 118
A S + + P Y + N LA
Sbjct: 212 MAFSDARPSPQMPLQTAANPQGGPPYRTVGNTLA 245
>gi|189485503|ref|YP_001956444.1| ComEC-like cytoplasmic membrane protein [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|170287462|dbj|BAG13983.1| ComEC-like cytoplasmic membrane protein [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 603
Score = 35.9 bits (81), Expect = 9.7, Method: Composition-based stats.
Identities = 18/152 (11%), Positives = 53/152 (34%), Gaps = 18/152 (11%)
Query: 31 FPGLFDFNFSSYYKGISAIGYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGT 90
F F ++S+ I + ++ ++ + + + F + ++
Sbjct: 296 FTASFQMSYSAT---IGVVCFYKNVLGLF-----------RNVKGKILRFFCGVL-SVTI 340
Query: 91 YGSASASIFLIKHFHCIPVYGLIANILAIPILSFVVIPAGLIAILLMILS-LDNIPFGVM 149
+ +F I + + NI+ P+ ++ + IL I + ++
Sbjct: 341 SAQLILIPVCMHYFGKISIISFVTNIIVTPLTGIILYLGIIFYILTFIFHNAAALCSFIL 400
Query: 150 AWGLDIIIHIAHRISVAHNEFCIGRIPETSFV 181
+ L ++ + + +F + IP+ S +
Sbjct: 401 SLLLKFVLSVTIFLGNI--KFAVVLIPKPSVI 430
>gi|120601183|ref|YP_965583.1| ComEC/Rec2-related protein [Desulfovibrio vulgaris DP4]
gi|120561412|gb|ABM27156.1| ComEC/Rec2-related protein [Desulfovibrio vulgaris DP4]
Length = 979
Score = 35.9 bits (81), Expect = 9.8, Method: Composition-based stats.
Identities = 24/209 (11%), Positives = 60/209 (28%), Gaps = 20/209 (9%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ P + G G PG + ++ S +
Sbjct: 445 LAVASIALSLPFAAWLHGGGH----HGDFRPGT-----APPLADVTGSTGTLSTGTLSTG 495
Query: 62 SESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLI------KHFHCIPVYGLIAN 115
+E + ++++ +R + + ++ + F + + N
Sbjct: 496 TEGISDAGGPDTATLRDGVWQRVRRALMLMALTTLAVQVALLPVQLMGFGRASPWFAL-N 554
Query: 116 ILAIPILSFVVIPAGLIAILLMILS----LDNIPFGVMAWGLDIIIHIAHRISVAHNEFC 171
+L +P VV+P G + ++ L V A + ++ + + A
Sbjct: 555 LLWLPFADLVVLPLGALGLVCEAADLTRPLTGPLLMVAALPCEGLMWLLEWMEGAGLLAV 614
Query: 172 IGRIPETSFVTIVVEFLLMVFCKTNIRHI 200
+ + L++ F R
Sbjct: 615 PAMLRPHWTAALGYGALVVAFASLPGRLF 643
>gi|78355594|ref|YP_387043.1| ComEC/Rec2-like protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78217999|gb|ABB37348.1| ComEC/Rec2-related protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 900
Score = 35.9 bits (81), Expect = 9.9, Method: Composition-based stats.
Identities = 13/153 (8%), Positives = 45/153 (29%), Gaps = 14/153 (9%)
Query: 50 GYFYSIPKMIYSSESHNTWTWKKISSIKQSFLNEIRANIGTYGSASASIFLIKHFHCIPV 109
Y + ++ + + + + A + + F +
Sbjct: 442 VYRAAAGRLGTKHGTAAGAVMRLTGGLAGVLAVSMAAQLALMPLTLDA------FGSVTP 495
Query: 110 YGLIANILAIPILSFVVIPAGLIAILLMILSLDNIP----FGVMAWGLDI---IIHIAHR 162
+ ++ N+L +P L V+P ++ + L F V ++ ++
Sbjct: 496 WFVL-NVLWLPALGLWVLPLAFAGLVSLALPQAAPVAVWLFHVATVPVEWLLEMLGTLEA 554
Query: 163 ISVAHNEFCIGRIPETSFVTIVVEFLLMVFCKT 195
+ + + +P + ++ + +
Sbjct: 555 GGLLYPVLSVRPLPCAAAGFWMLLGTACLLWRG 587
>gi|325119106|emb|CBZ54658.1| hypothetical protein NCLIV_050860 [Neospora caninum Liverpool]
Length = 362
Score = 35.9 bits (81), Expect = 10.0, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 54/166 (32%), Gaps = 17/166 (10%)
Query: 2 LSITKKYDPFPAETTIEGIARLSPPSGPAFPGLFDFNFSSYYKGISAIGYFYSIPKMIYS 61
L++ +Y F + GIA S P P F + G ++ + I +
Sbjct: 118 LAMGTQYWQFAVLKVLNGIAMARALSAPVSPSSFFPIVKASASGRKSVNFLGCIVGALIG 177
Query: 62 SESHNTWTWKKISSIKQS-FLNEIRANIGTYGSASASIFLIK---------HFHCIPVYG 111
+ + I + + G S+F HFH P+ G
Sbjct: 178 GSMASLTVVPGVRYIGMPDWQASVLTACPLIGGMVGSLFGGWLGDQADHWSHFHGRPLIG 237
Query: 112 LIANILAIPI--LSFVVIPAGLIAILLMILSLDNIPFGVMAWGLDI 155
+ +++IP+ + +VIP L + ++ + +
Sbjct: 238 QMGTLISIPLIYMGLLVIPRR-----PEFFGLYALDMLLLGFAIAW 278
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.313 0.123 0.340
Lambda K H
0.267 0.0373 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,556,447,961
Number of Sequences: 14124377
Number of extensions: 241893441
Number of successful extensions: 1459912
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 1483
Number of HSP's successfully gapped in prelim test: 9044
Number of HSP's that attempted gapping in prelim test: 1446088
Number of HSP's gapped (non-prelim): 18533
length of query: 394
length of database: 4,842,793,630
effective HSP length: 141
effective length of query: 253
effective length of database: 2,851,256,473
effective search space: 721367887669
effective search space used: 721367887669
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.1 bits)
S2: 82 (36.3 bits)