HHsearch alignment for GI: 254780360 and conserved domain: PRK12848
>PRK12848 ubiA 4-hydroxybenzoate octaprenyltransferase; Reviewed.
Probab=100.00 E-value=0 Score=454.48 Aligned_cols=277 Identities=23% Similarity=0.266 Sum_probs=242.4
Q ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHCHHH
Q ss_conf 65379999996---268999999999999997089-89989999999999999999998863306612013712107056
Q gi|254780360|r 5 VFRLNFFIVLL---KPRVMSLAIYTAFVGIVLAPG-HISVLKSVISIFAIAMGAGASGALNMYYDADIDKMMARTASRPI 80 (305)
Q Consensus 5 ~~k~~~y~~L~---kp~~~~~~~~~~~~g~~la~~-~~~~~~~~~~~~~~~l~~~a~~~~Nd~~D~~iD~~~~RT~~RPl 80 (305)
T Consensus 2 ~~k~~~Y~~L~Rl~kP~g~~Ll~~p~~~g~~la~~g~~~~~~l~~~~~g~~~~r~agc~~Nd~~DrdiD~~~~RTk~RPl 81 (282)
T PRK12848 2 QDRLLAYARLMRLDKPIGTLLLLWPTLWALWLAADGIPDLWVLVIFVLGVFLMRAAGCVINDYADRDFDGHVKRTKNRPL 81 (282)
T ss_pred CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 27799999998426861159999999999998568999889999999999999999989999988723258988899988
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCC
Q ss_conf 65304789899988887766899988634458999999988865444544310266560588887766422110132368
Q gi|254780360|r 81 PLGQISPWEAWVLGVSLAVSSIVIMGLAINWVSATLLFMSIFCYVVIYTIWLKRFTPQNIVIGGIAGAIPPMIGWASVTG 160 (305)
Q Consensus 81 ~~g~is~~~a~~~~~~l~~~~~~~l~~~~n~~~~~l~~~~~~~y~~iYtp~lKR~t~~~~~~~~i~ga~~~l~g~~a~~~ 160 (305)
T Consensus 82 ~~G~is~~~A~~~~~~~~~~~~~~l-~~ln~~~~~l~~~~~~~-~~iY-p~~KR~t~~p~~~lG~~~~~~~l~g~~a~~g 158 (282)
T PRK12848 82 ASGAVSEKEALALFVVLVLVAFLLV-LTLNTLTIWLSVAALAL-AFIY-PFMKRYTHLPQVVLGAAFGWGIPMAFAAVQG 158 (282)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH-HHHH-HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 7772679999999999999999999-99999999999999999-9888-7657641375029999987566668999749
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 85663211147888899999999986535666641013351243388778997434568989987642102210899999
Q gi|254780360|r 161 DVSIASLVMFLIIFLWTPPHFWSLALLCKDDYQKASIPMLPNVVTDRTTKMHILIYTVLTSIVGVLPTMLGFASVTYGII 240 (305)
Q Consensus 161 ~~~~~~~~l~~~~~~W~~~~~~~~a~~d~~dd~k~Gikslpv~~G~k~t~~~i~~ysi~~~llsll~~~~~~~g~~yli~ 240 (305)
T Consensus 159 ~~~~~~~~L~~~~~~Wt~~~d~~yA~~D~~dD~~~Gv~S~av~~G~~~~~~i~~~~~~~~~l~~~~g~~~~-~~~~y~~~ 237 (282)
T PRK12848 159 SVPLEAWLLFLANILWTVAYDTQYAMVDRDDDLKIGIKSTAILFGRYDKLIIGLLQLATLALLALAGWLLG-LGWGYYWG 237 (282)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHH
T ss_conf 99889999999999999998899997056539766999645886500189999999999999999999973-73999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999504889978999998798999999999999986
Q gi|254780360|r 241 VFFLGYHFTLWAWRTFLCKEDKDIRVTKKLFLESITYLFVLFTILMVDH 289 (305)
Q Consensus 241 ali~~~~~l~~a~~~~~~~~~~~~k~a~klF~~S~~yl~ilfl~liid~ 289 (305)
T Consensus 238 ~~~~~~~l~~-q~~~---v~~~d~~~~~~~F~~N~~~g~ilf~gi~ldy 282 (282)
T PRK12848 238 LLVAAALFVY-QQKL---IRDREREACFKAFLNNNWVGLVLFAGIAASY 282 (282)
T ss_pred HHHHHHHHHH-HHHH---HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999-9998---0699889999999973999999999999419