HHsearch alignment for GI: 254780360 and conserved domain: PRK12869
>PRK12869 ubiA prenyltransferase; Reviewed.
Probab=100.00 E-value=0 Score=492.34 Aligned_cols=278 Identities=32% Similarity=0.495 Sum_probs=264.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHCHHHHHHHCCH
Q ss_conf 79999996268999999999999997089899899999999999999999988633066120137121070566530478
Q gi|254780360|r 8 LNFFIVLLKPRVMSLAIYTAFVGIVLAPGHISVLKSVISIFAIAMGAGASGALNMYYDADIDKMMARTASRPIPLGQISP 87 (305)
Q Consensus 8 ~~~y~~L~kp~~~~~~~~~~~~g~~la~~~~~~~~~~~~~~~~~l~~~a~~~~Nd~~D~~iD~~~~RT~~RPl~~g~is~ 87 (305)
T Consensus 1 lk~Y~~L~Kp~~~~l~~~~~~~g~~la~~~~~~~~~~~~~~g~~l~~~~~~~~N~~~DrdiD~~m~RT~~RPlpsG~is~ 80 (278)
T PRK12869 1 LNPYLKLLKPRVIWLLDLAAVAGYIYAAGGVDWGSLIALLIVGTLASGGSAAFNHYWERDIDAVMKRTSKRPLPSGLVSP 80 (278)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
T ss_conf 97689895599999999999999999389998799999999999999999999838874347688888888432588889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCC
Q ss_conf 98999888877668999886344589999999888654445443102665605888877664221101323688566321
Q gi|254780360|r 88 WEAWVLGVSLAVSSIVIMGLAINWVSATLLFMSIFCYVVIYTIWLKRFTPQNIVIGGIAGAIPPMIGWASVTGDVSIASL 167 (305)
Q Consensus 88 ~~a~~~~~~l~~~~~~~l~~~~n~~~~~l~~~~~~~y~~iYtp~lKR~t~~~~~~~~i~ga~~~l~g~~a~~~~~~~~~~ 167 (305)
T Consensus 81 ~~a~~~~~~l~~~g~~~~~~~~~~~~a~~~~~~~~~y~~iYt~~lKr~t~~~~~igg~~ga~p~l~Gw~a~~g~~~~~~~ 160 (278)
T PRK12869 81 KEALAYSLALSALGILLGFLLLGPLPGLFIALGWFFYAVVYTIWLKRRTWLNIVIGGFAGNAAFLAGYALGKGSVDLPAV 160 (278)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 99999999999999999999999999999999999999998762520661869999998889999999998399985899
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 11478888999999999865356666410133512433887789974345689899876421022108999999999999
Q gi|254780360|r 168 VMFLIIFLWTPPHFWSLALLCKDDYQKASIPMLPNVVTDRTTKMHILIYTVLTSIVGVLPTMLGFASVTYGIIVFFLGYH 247 (305)
Q Consensus 168 ~l~~~~~~W~~~~~~~~a~~d~~dd~k~Gikslpv~~G~k~t~~~i~~ysi~~~llsll~~~~~~~g~~yli~ali~~~~ 247 (305)
T Consensus 161 ~l~~~~~~W~~~hf~~~a~~~~edy~~aGi~mlp~~~g~~~t~~~i~~~~~~~~~~~~~~~~~~~~g~~y~~~~~~~~~~ 240 (278)
T PRK12869 161 LLSFAIYLWIPGHIWALAYKYREDYRRAGVPMLPAVVDEKTAVRAISILNAASIPYILLLYLYFGGGLIGLILVAAGVAA 240 (278)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999989999999999476098679988862118624999999999999999999999987149999999999999
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999950488997899999879899999999999998
Q gi|254780360|r 248 FTLWAWRTFLCKEDKDIRVTKKLFLESITYLFVLFTILMVD 288 (305)
Q Consensus 248 ~l~~a~~~~~~~~~~~~k~a~klF~~S~~yl~ilfl~liid 288 (305)
T Consensus 241 ~l~~~~~~~~---~~~~~~a~k~F~~S~~yl~llfi~lvl~ 278 (278)
T PRK12869 241 TLATSIRALV---NPTDEAMWKMFKASSPYLALFLLALIIS 278 (278)
T ss_pred HHHHHHHHHH---CCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999972---8987999999999999999999999979