HHsearch alignment for GI: 254780360 and conserved domain: PRK12878

>PRK12878 ubiA prenyltransferase; Reviewed.
Probab=100.00  E-value=0  Score=448.51  Aligned_cols=277  Identities=23%  Similarity=0.258  Sum_probs=236.4

Q ss_pred             HHHHHHHHHH---HHHHHHHHHHHHHHHHHHCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHH
Q ss_conf             5379999996---268999999999999997089------8998999999999999999999886330661201371210
Q gi|254780360|r    6 FRLNFFIVLL---KPRVMSLAIYTAFVGIVLAPG------HISVLKSVISIFAIAMGAGASGALNMYYDADIDKMMARTA   76 (305)
Q Consensus         6 ~k~~~y~~L~---kp~~~~~~~~~~~~g~~la~~------~~~~~~~~~~~~~~~l~~~a~~~~Nd~~D~~iD~~~~RT~   76 (305)
T Consensus        28 ~~~~pY~~L~RldkPiG~~LL~~P~~w~l~laa~~~~~~~~~~~~~l~lf~~G~~~mRsAGCviNDi~DrdiD~~v~RTk  107 (314)
T PRK12878         28 PWLRPYARLARWDRPIGWWLLLWPCWWSAALAAGAAADLGLPLLWHLFLFFIGAIAMRGAGCTWNDIVDRDLDAKVARTR  107 (314)
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
T ss_conf             75789999984366198999999999999998615676666279999999999999931201999889860042564456


Q ss_pred             CHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEE
Q ss_conf             70566530478989998888776689998863445899999998886544454431026656058888776642211013
Q gi|254780360|r   77 SRPIPLGQISPWEAWVLGVSLAVSSIVIMGLAINWVSATLLFMSIFCYVVIYTIWLKRFTPQNIVIGGIAGAIPPMIGWA  156 (305)
Q Consensus        77 ~RPl~~g~is~~~a~~~~~~l~~~~~~~l~~~~n~~~~~l~~~~~~~y~~iYtp~lKR~t~~~~~~~~i~ga~~~l~g~~  156 (305)
T Consensus       108 ~RPLasG~iS~~~A~~f~~~l~~~~~~ll-~~ln~~~~~l~~~~l~l-v~iY-P~~KR~t~~PQ~~LGl~f~~g~l~gw~  184 (314)
T PRK12878        108 SRPLPSGQVSRKQAKVFMVLQALVGLAVL-LQFNRFAIALGIASLAI-VAAY-PFMKRITWWPQFFLGLAFSWGALMGWA  184 (314)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH-HHHH-HHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             78876677799999999999999999999-99859999999999999-9999-999862103799999997305888999


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf             23688566321114788889999999998653566664101335124338877899743456898998764210221089
Q gi|254780360|r  157 SVTGDVSIASLVMFLIIFLWTPPHFWSLALLCKDDYQKASIPMLPNVVTDRTTKMHILIYTVLTSIVGVLPTMLGFASVT  236 (305)
Q Consensus       157 a~~~~~~~~~~~l~~~~~~W~~~~~~~~a~~d~~dd~k~Gikslpv~~G~k~t~~~i~~ysi~~~llsll~~~~~~~g~~  236 (305)
T Consensus       185 Av~g~l~~~~~lL~~a~~~Wt~~yDtiYA~qD~~DD~k~GVkStav~fG~~~~~~i~~~~~l~~~ll~~~~-~~~~~~~~  263 (314)
T PRK12878        185 ATFGSLSWAAVLLYAGSIAWTIGYDTIYAHQDKEDDALIGVKSTARLFGEHTKTWLVLLYGLAVVLMGAAF-ALARAPLL  263 (314)
T ss_pred             HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_conf             71688766999999999999999999997314765987699731578543729999999999999999999-99852299


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999999999999999995048899789999987989999999999999866
Q gi|254780360|r  237 YGIIVFFLGYHFTLWAWRTFLCKEDKDIRVTKKLFLESITYLFVLFTILMVDHL  290 (305)
Q Consensus       237 yli~ali~~~~~l~~a~~~~~~~~~~~~k~a~klF~~S~~yl~ilfl~liid~~  290 (305)
T Consensus       264 ~~~~~~~~~~~l~~-q---~~~~~~~~~~~~~~~Fk~N~~~G~iif~gi~~~~L  313 (314)
T PRK12878        264 ALLGLLAAAAHLAW-Q---IVRLDIDDPAQCLRLFKSNRDAGLLIFAGLVVGGL  313 (314)
T ss_pred             HHHHHHHHHHHHHH-H---HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             99999999999999-9---99817998899999999819999999999998543