HHsearch alignment for GI: 254780360 and conserved domain: PRK12895
>PRK12895 ubiA prenyltransferase; Reviewed.
Probab=100.00 E-value=0 Score=422.80 Aligned_cols=282 Identities=14% Similarity=0.154 Sum_probs=241.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHCHHHHHHH
Q ss_conf 53799999962689999999999999970898-99899999999999999999988633066120137121070566530
Q gi|254780360|r 6 FRLNFFIVLLKPRVMSLAIYTAFVGIVLAPGH-ISVLKSVISIFAIAMGAGASGALNMYYDADIDKMMARTASRPIPLGQ 84 (305)
Q Consensus 6 ~k~~~y~~L~kp~~~~~~~~~~~~g~~la~~~-~~~~~~~~~~~~~~l~~~a~~~~Nd~~D~~iD~~~~RT~~RPl~~g~ 84 (305)
T Consensus 1 ~~~~~~~~~i~~~htiFalPfa~~~~~~A~~~~p~~~~l~l~~lg~v~~Rsagc~iNdi~DrdiD~~v~RTk~RpL~sG~ 80 (286)
T PRK12895 1 MNFRDIVDYIKLEHTVFDLPFILAGYVIAAGHYIHPIKILLILIAAVSARTSAMSINRIEGLRYDMINPRKKDWALVSGR 80 (286)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 97899999999976998899999999997799998899999999999998999899987060434579888999798889
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCCCCC
Q ss_conf 47898999888877668999886344589999999888654445443102665605888877664221101323688566
Q gi|254780360|r 85 ISPWEAWVLGVSLAVSSIVIMGLAINWVSATLLFMSIFCYVVIYTIWLKRFTPQNIVIGGIAGAIPPMIGWASVTGDVSI 164 (305)
Q Consensus 85 is~~~a~~~~~~l~~~~~~~l~~~~n~~~~~l~~~~~~~y~~iYtp~lKR~t~~~~~~~~i~ga~~~l~g~~a~~~~~~~ 164 (305)
T Consensus 81 is~~eA~~~~~~~~~~~~~~-~~~ln~~~~~ls~~al~l-~~~Y-P~~KRft~~pq~~LG~~f~~g~l~a~~Av~~~~~~ 157 (286)
T PRK12895 81 IKMREAIAFTIIFIAIFEIC-TFLLNRLVFILSPIVIFL-FIID-PFLKRYTAWRHIYMGSIIGLGVLAGYLAVIPAFPY 157 (286)
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHHHCHHHHHHHHHHHHH-HHHH-HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 79999999999999999999-997179999999999999-9985-66654255509999999998999999998088872
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf --321114788889999999998653566664101335124338877899743456898998764210221089999999
Q gi|254780360|r 165 --ASLVMFLIIFLWTPPHFWSLALLCKDDYQKASIPMLPNVVTDRTTKMHILIYTVLTSIVGVLPTMLGFASVTYGIIVF 242 (305)
Q Consensus 165 --~~~~l~~~~~~W~~~~~~~~a~~d~~dd~k~Gikslpv~~G~k~t~~~i~~ysi~~~llsll~~~~~~~g~~yli~al 242 (305)
T Consensus 158 ~~~~~lL~~a~~~W~~gfDtiYA~qD~edD~k~Gi~S~a~~fG~~~~l~i~~~~~~~~~~l~~~~~~~~~-~~~~~~~l~ 236 (286)
T PRK12895 158 NLLIYIIFISSSLWIAGFDIIYVIPDIEYDKINGLKTIMNTYGIKNGLYISDIFHISSLILFWISGIYIR-TLWYLAALI 236 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_conf 0899999999999999998999706732099849535699868821899999999999999999999984-799999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf 9999999999999950488997899999879899999999999998660845
Q gi|254780360|r 243 FLGYHFTLWAWRTFLCKEDKDIRVTKKLFLESITYLFVLFTILMVDHLIDMK 294 (305)
Q Consensus 243 i~~~~~l~~a~~~~~~~~~~~~k~a~klF~~S~~yl~ilfl~liid~~i~~~ 294 (305)
T Consensus 237 ~~~~ll~---yq~~~~~~~d~~~~~~afF~~N~~iGli~~~~iil~~~fp~~ 285 (286)
T PRK12895 237 IIYTLVI---YQHLIIDPRNPINKRMSFFNANSFIGFVFLIGIILSLRFPIR 285 (286)
T ss_pred HHHHHHH---HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 9999999---999994789869999999988539999999999999826456