HHsearch alignment for GI: 254780360 and conserved domain: PRK12895

>PRK12895 ubiA prenyltransferase; Reviewed.
Probab=100.00  E-value=0  Score=422.80  Aligned_cols=282  Identities=14%  Similarity=0.154  Sum_probs=241.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHCHHHHHHH
Q ss_conf             53799999962689999999999999970898-99899999999999999999988633066120137121070566530
Q gi|254780360|r    6 FRLNFFIVLLKPRVMSLAIYTAFVGIVLAPGH-ISVLKSVISIFAIAMGAGASGALNMYYDADIDKMMARTASRPIPLGQ   84 (305)
Q Consensus         6 ~k~~~y~~L~kp~~~~~~~~~~~~g~~la~~~-~~~~~~~~~~~~~~l~~~a~~~~Nd~~D~~iD~~~~RT~~RPl~~g~   84 (305)
T Consensus         1 ~~~~~~~~~i~~~htiFalPfa~~~~~~A~~~~p~~~~l~l~~lg~v~~Rsagc~iNdi~DrdiD~~v~RTk~RpL~sG~   80 (286)
T PRK12895          1 MNFRDIVDYIKLEHTVFDLPFILAGYVIAAGHYIHPIKILLILIAAVSARTSAMSINRIEGLRYDMINPRKKDWALVSGR   80 (286)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf             97899999999976998899999999997799998899999999999998999899987060434579888999798889


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCCCCC
Q ss_conf             47898999888877668999886344589999999888654445443102665605888877664221101323688566
Q gi|254780360|r   85 ISPWEAWVLGVSLAVSSIVIMGLAINWVSATLLFMSIFCYVVIYTIWLKRFTPQNIVIGGIAGAIPPMIGWASVTGDVSI  164 (305)
Q Consensus        85 is~~~a~~~~~~l~~~~~~~l~~~~n~~~~~l~~~~~~~y~~iYtp~lKR~t~~~~~~~~i~ga~~~l~g~~a~~~~~~~  164 (305)
T Consensus        81 is~~eA~~~~~~~~~~~~~~-~~~ln~~~~~ls~~al~l-~~~Y-P~~KRft~~pq~~LG~~f~~g~l~a~~Av~~~~~~  157 (286)
T PRK12895         81 IKMREAIAFTIIFIAIFEIC-TFLLNRLVFILSPIVIFL-FIID-PFLKRYTAWRHIYMGSIIGLGVLAGYLAVIPAFPY  157 (286)
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHHHCHHHHHHHHHHHHH-HHHH-HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             79999999999999999999-997179999999999999-9985-66654255509999999998999999998088872


Q ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf             --321114788889999999998653566664101335124338877899743456898998764210221089999999
Q gi|254780360|r  165 --ASLVMFLIIFLWTPPHFWSLALLCKDDYQKASIPMLPNVVTDRTTKMHILIYTVLTSIVGVLPTMLGFASVTYGIIVF  242 (305)
Q Consensus       165 --~~~~l~~~~~~W~~~~~~~~a~~d~~dd~k~Gikslpv~~G~k~t~~~i~~ysi~~~llsll~~~~~~~g~~yli~al  242 (305)
T Consensus       158 ~~~~~lL~~a~~~W~~gfDtiYA~qD~edD~k~Gi~S~a~~fG~~~~l~i~~~~~~~~~~l~~~~~~~~~-~~~~~~~l~  236 (286)
T PRK12895        158 NLLIYIIFISSSLWIAGFDIIYVIPDIEYDKINGLKTIMNTYGIKNGLYISDIFHISSLILFWISGIYIR-TLWYLAALI  236 (286)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_conf             0899999999999999998999706732099849535699868821899999999999999999999984-799999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf             9999999999999950488997899999879899999999999998660845
Q gi|254780360|r  243 FLGYHFTLWAWRTFLCKEDKDIRVTKKLFLESITYLFVLFTILMVDHLIDMK  294 (305)
Q Consensus       243 i~~~~~l~~a~~~~~~~~~~~~k~a~klF~~S~~yl~ilfl~liid~~i~~~  294 (305)
T Consensus       237 ~~~~ll~---yq~~~~~~~d~~~~~~afF~~N~~iGli~~~~iil~~~fp~~  285 (286)
T PRK12895        237 IIYTLVI---YQHLIIDPRNPINKRMSFFNANSFIGFVFLIGIILSLRFPIR  285 (286)
T ss_pred             HHHHHHH---HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             9999999---999994789869999999988539999999999999826456