HHsearch alignment for GI: 254780360 and conserved domain: PRK13106

>PRK13106 ubiA prenyltransferase; Reviewed.
Probab=100.00  E-value=0  Score=410.51  Aligned_cols=280  Identities=15%  Similarity=0.156  Sum_probs=240.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHCHHHHH
Q ss_conf             36537999999626899999999999999708-98998999999999999999999886330661201371210705665
Q gi|254780360|r    4 QVFRLNFFIVLLKPRVMSLAIYTAFVGIVLAP-GHISVLKSVISIFAIAMGAGASGALNMYYDADIDKMMARTASRPIPL   82 (305)
Q Consensus         4 ~~~k~~~y~~L~kp~~~~~~~~~~~~g~~la~-~~~~~~~~~~~~~~~~l~~~a~~~~Nd~~D~~iD~~~~RT~~RPl~~   82 (305)
T Consensus        11 ~~~K~~~y~~l~r~~~~if~Lp~a~~~~~lA~~g~p~~~~l~~~~lg~~~~Rsagc~iNdi~Dr~iD~~v~RT~~RPL~s   90 (299)
T PRK13106         11 SRSKLYIYLRFLRIEQTFFSLPMAYMGAFLAIRGIPPIRTLILIFLALFFLRTAGMTNDNLADREIDAKNPRTRTRPLVT   90 (299)
T ss_pred             CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf             57799999999998249999999999999972899989999999999999999998999860517446896668888766


Q ss_pred             HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCCC
Q ss_conf             30478989998888776689998863445899999998886544454431026656058888776642211013236885
Q gi|254780360|r   83 GQISPWEAWVLGVSLAVSSIVIMGLAINWVSATLLFMSIFCYVVIYTIWLKRFTPQNIVIGGIAGAIPPMIGWASVTGDV  162 (305)
Q Consensus        83 g~is~~~a~~~~~~l~~~~~~~l~~~~n~~~~~l~~~~~~~y~~iYtp~lKR~t~~~~~~~~i~ga~~~l~g~~a~~~~~  162 (305)
T Consensus        91 G~is~~~A~~~~~~~~~~~~~~-~~~ln~~~~~ls~~~~~~-~~~Y-P~~KRft~~pq~~LG~~~~~~~~~~~~a~~g~~  167 (299)
T PRK13106         91 GAITVREAWLLIAAGLIGYFAS-AYLLNRYALLLSPIVALI-AMSY-PYMKRYTAFANYHLASVQGLAVFSGAVASLGLE  167 (299)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-HHHH-HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             8879999999999999999999-999749999999999999-9999-998873013369999999978999999985320


Q ss_pred             --------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             --------663211147888899999999986535666641013351243388778997434568989987642102210
Q gi|254780360|r  163 --------SIASLVMFLIIFLWTPPHFWSLALLCKDDYQKASIPMLPNVVTDRTTKMHILIYTVLTSIVGVLPTMLGFAS  234 (305)
Q Consensus       163 --------~~~~~~l~~~~~~W~~~~~~~~a~~d~~dd~k~Gikslpv~~G~k~t~~~i~~ysi~~~llsll~~~~~~~g  234 (305)
T Consensus       168 ~~~~~~~~~~~~~ll~~a~~~W~~~yDtiYA~qD~~dD~~~Gi~S~a~~fG~~-~~~~~~~~~~~~~~ll~~~g~~~~lg  246 (299)
T PRK13106        168 ATSLTQVLRSVPWLFVIATILWAVGFDLYNHIPDADFDRKMGLHSFAVLLGNK-ALAFAGLNQLASVLLAIAGDIAYGLG  246 (299)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             01235466789999999999999998598873782232765987028888577-99999999999999999999998627


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
Q ss_conf             899999999999999999999950488997899999879899999999999998660845
Q gi|254780360|r  235 VTYGIIVFFLGYHFTLWAWRTFLCKEDKDIRVTKKLFLESITYLFVLFTILMVDHLIDMK  294 (305)
Q Consensus       235 ~~yli~ali~~~~~l~~a~~~~~~~~~~~~k~a~klF~~S~~yl~ilfl~liid~~i~~~  294 (305)
T Consensus       247 ~~~~~~~~i~~~~~~yq---~~-l~~~~d---~~~aF~~N~~iGlilf~gi~ld~llg~~  299 (299)
T PRK13106        247 PIAYAATVLHGLIMAYA---YY-LASKGN---FGRAFYYNIYSSIVLGLGIIIDVLLGIP  299 (299)
T ss_pred             HHHHHHHHHHHHHHHHH---HH-HCCCCH---HHHHHHHCCHHHHHHHHHHHHHHHHCCC
T ss_conf             99999999999999999---99-589530---9999986189999999999999981899