RPSBLAST alignment for GI: 254780360 and conserved domain: TIGR01474

>gnl|CDD|130539 TIGR01474, ubiA_proteo, 4-hydroxybenzoate polyprenyl transferase, proteobacterial. A fairly deep split by both clustering (UPGMA) and phylogenetics (NJ tree) separates this group (mostly Proteobacterial and mitochondrial), with several characterized members, from another group (mostly archaeal and Gram-positive bacterial) lacking characterized members. Length = 281

 Score = 63.9 bits (156), Expect = 4e-11
 Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 4/135 (2%)

Query: 43  SVISIFAIAMGAGASGALNMYYDADIDKMMARTASRPIPLGQISPWEAWVLGVSLAVSSI 102
            + ++ AI M  GA   +N  +D D D  + RT SRP+  G +S  +A +  +   + ++
Sbjct: 43  GLFTVGAILM-RGAGCVINDIWDRDFDPQVERTKSRPLASGAVSVRQAILFLLVQLLVAL 101

Query: 103 VIMGLAINWVSATLLFMSIFCYVVIYTIWLKRFTPQNIVIGGIAGAIPPMIGWASVTGDV 162
            ++ L +N ++  L   S+   V  Y   +KR T    ++ G+A     ++GWA+VTGD+
Sbjct: 102 GVL-LQLNPLTILLGVASLA-LVATYPF-MKRITYWPQLVLGLAFGWGALMGWAAVTGDL 158

Query: 163 SIASLVMFLIIFLWT 177
           S A+ V++L   LWT
Sbjct: 159 STAAWVLYLANILWT 173