RPSBLAST alignment for GI: 254780360 and conserved domain: TIGR01473
>gnl|CDD|162379 TIGR01473, cyoE_ctaB, protoheme IX farnesyltransferase. This model describes protoheme IX farnesyltransferase, also called heme O synthase, an enzyme that creates an intermediate in the biosynthesis of heme A. Prior to the description of its enzymatic function, this protein was often called a cytochrome o ubiquinol oxidase assembly factor. Length = 280
Score = 268 bits (688), Expect = 1e-72
Identities = 126/280 (45%), Positives = 177/280 (63%), Gaps = 4/280 (1%)
Query: 11 FIVLLKPRVMSLAIYTAFVGIVLAPGH--ISVLKSVISIFAIAMGAGASGALNMYYDADI 68
++ L KPR++SL + TAF G+ LAPG ++ ++++ + A ++ A NMY D DI
Sbjct: 3 YLQLTKPRIISLLLITAFAGMWLAPGGALVNPPLLLLTLLGTTLAAASANAFNMYIDRDI 62
Query: 69 DKMMARTASRPIPLGQISPWEAWVLGVSLAVSSIVIMGLAINWVSATLLFMSIFCYVVIY 128
DK M RT +RP+ G+ISP EA G+ L V + I+ +N ++A L IF YV++Y
Sbjct: 63 DKKMKRTRNRPLVTGRISPREALAFGLLLGVLGVAILAAFVNPLAALLGLFGIFFYVIVY 122
Query: 129 TIWLKRFTPQNIVIGGIAGAIPPMIGWASVTGDVSIASLVMFLIIFLWTPPHFWSLALLC 188
TIWLKR TPQN VIGG AGA+PP+IGWA+VTG +S+ + ++F IIFLW PPHFW+LAL
Sbjct: 123 TIWLKRRTPQNTVIGGFAGAVPPLIGWAAVTGSISLGAWLLFAIIFLWQPPHFWALALKY 182
Query: 189 KDDYQKASIPMLPNVVTDRTTKMHILIYTVLTSIVGVLPTMLGFASVTYGIIVFFLGYHF 248
KDDY+ A IPMLP V +R TK I +YT V +L LG Y I+ LG F
Sbjct: 183 KDDYRAAGIPMLPVVKGERITKRQIALYTAALLPVSLLLAFLGGTGWLYLIVATLLGALF 242
Query: 249 TLWAWRTFLCKEDKDIRVTKKLFLESITYLFVLFTILMVD 288
A++ + ++ D + +KLF S+ YL +LF L++D
Sbjct: 243 LYLAFKFY--RDPTDRKKARKLFKFSLIYLALLFVALLID 280