HHSEARCH alignment of GI: 254780361 and SCOP domain: d2j0151

Alignment
>d2j0151 g.41.8.5 (5:2-60) Ribosomal protein L32p {Thermus thermophilus [TaxId: 274]}
Probab=99.94  E-value=7.5e-29  Score=169.47  Aligned_cols=57  Identities=42%  Similarity=0.670  Sum_probs=56.0

Q ss_pred             CCCCCCCCCHHCCCCHHHHHCCCCCCEEECCCCCCEEEEEEEECCCCCCCCEEEEEE
Q ss_conf             978878876100174122310268837887899782440464257786768796434
Q gi|254780361|r    1 MAVPKRKTSPSKRGMRRSADALTPPAYVEDKKSGELRRPHHVDMKTGLYRGRQVFVL   57 (61)
Q Consensus         1 MAVPKrK~S~sr~~~RRsh~~l~~p~l~~c~~cG~~~~~H~vc~~cG~YkGr~Vi~~   57 (61)
                      |+|||+|+|+||+++|||||+|++|+|+.|++||++++||+||++||||+|||||++
T Consensus         3 ~pVPKrk~Sksr~~~RRsh~~l~~p~l~~C~~CG~~~~pHrvC~~CG~YkGr~Vi~v   59 (59)
T d2j0151           3 HPVPKKKTSKARRDARRSHHALTPPTLVPCPECKAMKPPHTVCPECGYYAGRKVLEV   59 (59)
T ss_dssp             SSCCSSCCCHHHHHHHHGGGCCCCCCCBCCSSSSSCBCTTCBCTTTCCSSSCCSCCC
T ss_pred             CCCCCCCCCCHHCHHHHCCCCCCCCCEEECCCCCCCCCCEEECCCCCEECCEEEEEC
T ss_conf             887777666010243311210358834688999981066068798980999986769


SCOP domain information

class: Small proteins
fold: Rubredoxin-like
superfamily: Zn-binding ribosomal proteins
family: Ribosomal protein L32p
domain: Ribosomal protein L32p
species: Thermus thermophilus [TaxId: 274]