PSIBLAST alignment of GI: 254780361 and protein with PDB id: 1vsa
gi|149240910|pdb|1VSA|Y Chain Y, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals Functional Interactions And Rearrangements. This File, 1vsa, Contains The 50s Ribosome Subunit. 30s Ribosome Subunit Is In The File 2ow8 Length = 60
>gi|160285452|pdb|1VSP|Y Chain Y, Interactions And Dynamics Of The Shine-Dalgarno Helix In The 70s Ribosome. This File, 1vsp, Contains The 50s Ribosome Subunit. 30s Ribosome Subunit Is In The File 2qnh Length = 60
Score = 78.8 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 2 AVPKRKTSPSKRGMRRSADALTPPAYVEDKKSGELRRPHHVDMKTGLYRGRQVFVL 57
VPK+KTS ++R RRS ALTPP V + ++ PH V + G Y GR+V +
Sbjct: 5 PVPKKKTSKARRDARRSHHALTPPILVPCPECKAMKPPHTVCPECGYYAGRKVLEV 60