RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780361|ref|YP_003064774.1| ribosomal protein L32 [Candidatus Liberibacter asiaticus str. psy62] (61 letters) >d2zjrz1 g.41.8.5 (Z:2-59) Ribosomal protein L32p {Deinococcus radiodurans [TaxId: 1299]} Length = 58 Score = 78.1 bits (193), Expect = 2e-16 Identities = 26/54 (48%), Positives = 30/54 (55%) Query: 1 MAVPKRKTSPSKRGMRRSADALTPPAYVEDKKSGELRRPHHVDMKTGLYRGRQV 54 VPK+KTS SKR MRRS ALT P E + + HH+ G Y GRQV Sbjct: 3 HPVPKKKTSKSKRDMRRSHHALTAPNLTECPQCHGKKLSHHICPNCGYYDGRQV 56 >d2j0151 g.41.8.5 (5:2-60) Ribosomal protein L32p {Thermus thermophilus [TaxId: 274]} Length = 59 Score = 77.0 bits (190), Expect = 4e-16 Identities = 24/54 (44%), Positives = 32/54 (59%) Query: 1 MAVPKRKTSPSKRGMRRSADALTPPAYVEDKKSGELRRPHHVDMKTGLYRGRQV 54 VPK+KTS ++R RRS ALTPP V + ++ PH V + G Y GR+V Sbjct: 3 HPVPKKKTSKARRDARRSHHALTPPTLVPCPECKAMKPPHTVCPECGYYAGRKV 56 >d2qam01 g.41.8.5 (0:1-56) Ribosomal protein L32p {Escherichia coli [TaxId: 562]} Length = 56 Score = 67.4 bits (165), Expect = 3e-13 Identities = 28/55 (50%), Positives = 33/55 (60%), Gaps = 2/55 (3%) Query: 2 AVPKRKTSPSKRGMRRSADALT-PPAYVEDKKSGELRRPHHVDMKTGLYRGRQVF 55 AV + K + SKRGMRRS DALT + DK SGE HH+ G YRGR+V Sbjct: 1 AVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHIT-ADGYYRGRKVI 54 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.316 0.131 0.376 Gapped Lambda K H 0.267 0.0716 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 209,075 Number of extensions: 6953 Number of successful extensions: 15 Number of sequences better than 10.0: 1 Number of HSP's gapped: 13 Number of HSP's successfully gapped: 3 Length of query: 61 Length of database: 2,407,596 Length adjustment: 31 Effective length of query: 30 Effective length of database: 1,981,966 Effective search space: 59458980 Effective search space used: 59458980 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 47 (21.9 bits)