HHsearch alignment for GI: 254780363 and conserved domain: PRK00054

>PRK00054 dihydroorotate dehydrogenase electron transfer subunit; Reviewed.
Probab=100.00  E-value=8.2e-31  Score=225.82  Aligned_cols=200  Identities=21%  Similarity=0.334  Sum_probs=152.6

Q ss_pred             CCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCC
Q ss_conf             53106898888479986999980778998399717999984398588766542285768860589999438885661001
Q gi|254780363|r   11 NVYCESVISIKHYTDRLFRFCITRPKSFRFRSGEFVMLGLMVNGRRISRAYSMASPCWDDKLEFFSIKVEQGPLTTHLQN   90 (264)
Q Consensus        11 ~~~~~~V~~v~~~t~~~~~~~l~~~~~~~f~~GQ~v~i~~~~~g~~~~R~YSiaS~p~~~~le~~i~~v~~G~~S~~L~~   90 (264)
T Consensus         3 ~p~~~~Iv~~~~~~~~i~~l~l~~~--~~~~PGQFv~l~~~~~~~~l~rP~Si~~~-~~~~~~i~v~~v--G~gT~~l~~   77 (248)
T PRK00054          3 KPENMKIVENKEIAPNIYTLVLDGD--FVFKPGQFVMVWVWDDPGLLERPISISDI-DKNENTILYRAV--GEGTKKLSK   77 (248)
T ss_pred             CCEEEEEEEEEEECCCEEEEEECCC--CCCCCCCEEEEEECCCCCCCCEEEEEEEC-CCCEEEEEEEEE--CHHHHHHHC
T ss_conf             7704799999995799799998466--87799977999978889844364199963-898589999998--879999961


Q ss_pred             CCCCCEEECCCCCCCC-CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf             2388510025788732-164322358669999758672778998876341035785799995199889873356689898
Q gi|254780363|r   91 IQPGDTILLHKKSTGT-LVLDALIPGNRLYLFSTGTGIAPFVSVIRDPGTYEKFDEVIVTQTCRQVVELQYGIDVMHEIS  169 (264)
Q Consensus        91 l~~Gd~i~i~~~p~G~-f~~d~~~~~~~lilIAgGtGItP~~sii~~~~~~~~~~~i~L~~g~R~~~dl~y~~~l~~~~~  169 (264)
T Consensus        78 l~~Gd~l~v~G-PlGngf~~~~--~~~~~llVaGGiGiAPl~~l~~~l~--~~~~~v~~i~G~r~~~~l~~~~el~~~--  150 (248)
T PRK00054         78 LKEGDELDIRG-PLGNGFDLEK--IGGKVLLVGGGIGVAPLYELAKQLK--AKGVEVTTVLGARTKDEVIFEDEFEKY--  150 (248)
T ss_pred             CCCCCEEEEEC-CCCCCCCCCC--CCCEEEEEECCCCCCCHHHHHHHHH--HCCCCEEEEEECCCHHHCCHHHHHHHH--
T ss_conf             88999897452-5688723677--8961999967674576899999999--729977999975887981179999865--


Q ss_pred             HHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHCCEEEEECCHHHHHHHHHHHHHCCC
Q ss_conf             6445777405884389820454444465677543110478852899887313789996898999999999998698
Q gi|254780363|r  170 QDEILKDLIGQKLKFYRTVTQEDYLYKGRITNHILSGEFYRNMDLSPLNPDTDRIMICGSPTMIVDMKDLLIAKKF  245 (264)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~s~e~~~~~grit~~i~~g~l~~~~~~~~~~~~~~~vyiCGpp~Mi~~v~~~L~~~G~  245 (264)
T Consensus       151 ----------~~~~i--~tddGs~G~~G~vt~~l~~-----------~~~~~d~v~~cGP~~Mmk~v~~~~~~~~~  203 (248)
T PRK00054        151 ----------GDVYV--ATDDGSYGFKGFVTDVLDE-----------LDLDYDAIYSCGPEIMMKKVVEILKEKKV  203 (248)
T ss_pred             ----------CCEEE--EECCCCCCCCCEECHHHHH-----------CCCCCCEEEEECCHHHHHHHHHHHHHCCC
T ss_conf             ----------47679--8067867665171031232-----------25686899996998999999999875599