HHsearch alignment for GI: 254780363 and conserved domain: cd06204
>cd06204 CYPOR NADPH cytochrome p450 reductase (CYPOR) serves as an electron donor in several oxygenase systems and is a component of nitric oxide synthases and methionine synthase reductases. CYPOR transfers two electrons from NADPH to the heme of cytochrome p450 via FAD and FMN. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredo
Probab=99.87 E-value=1.8e-21 Score=163.41 Aligned_cols=172 Identities=19% Similarity=0.345 Sum_probs=113.9
Q ss_pred EEEEEEECCCCC--CCCEEEEEEEE---------CCCCCCCCCCCCCC---------------------CCEEECCCCCC
Q ss_conf 876654228576--88605899994---------38885661001238---------------------85100257887
Q gi|254780363|r 57 ISRAYSMASPCW--DDKLEFFSIKV---------EQGPLTTHLQNIQP---------------------GDTILLHKKST 104 (264)
Q Consensus 57 ~~R~YSiaS~p~--~~~le~~i~~v---------~~G~~S~~L~~l~~---------------------Gd~i~i~~~p~ 104 (264)
T Consensus 177 ~PR~YSIsSSp~~~p~~v~ltv~vv~~~~~~~~~~~GlcS~~L~~l~~~~~~~~~~~~~~~~~~~~~~~g~~v~v~ir~- 255 (416)
T cd06204 177 QPRYYSISSSSKVHPNRIHITAVVVKYPTPTGRIIKGVATNWLLALKPALNGEKPPTPYYLSGPRKKGGGSKVPVFVRR- 255 (416)
T ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC-
T ss_conf 7740002467446999699999999844599973020013667623422234433444433444334678658999834-
Q ss_pred CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH----CCCCCEEEEEECCCHH-HHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 321643223586699997586727789988763410----3578579999519988-98733566898986445777405
Q gi|254780363|r 105 GTLVLDALIPGNRLYLFSTGTGIAPFVSVIRDPGTY----EKFDEVIVTQTCRQVV-ELQYGIDVMHEISQDEILKDLIG 179 (264)
Q Consensus 105 G~f~~d~~~~~~~lilIAgGtGItP~~sii~~~~~~----~~~~~i~L~~g~R~~~-dl~y~~~l~~~~~~~~~~~~~~~ 179 (264)
T Consensus 256 s~F~LP~~-~~~PiIMIgpGTGiAPFr~FlqeR~~~~~~~~~~G~~~LffGcR~~~~D~lY~~El~~~~~~g-------- 326 (416)
T cd06204 256 SNFRLPTK-PSTPVIMIGPGTGVAPFRGFIQERAALKESGKKVGPTLLFFGCRHPDEDFIYKDELEEYAKLG-------- 326 (416)
T ss_pred CCCCCCCC-CCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCC--------
T ss_conf 76668988-888769981686618789999999999851876576699952688652415899999999759--------
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHCCEEEEECC-HHHHHHHHHHHHHC
Q ss_conf 88438982045444446567754311047885289988731378999689-89999999999986
Q gi|254780363|r 180 QKLKFYRTVTQEDYLYKGRITNHILSGEFYRNMDLSPLNPDTDRIMICGS-PTMIVDMKDLLIAK 243 (264)
Q Consensus 180 ~~~~~~~~~s~e~~~~~grit~~i~~g~l~~~~~~~~~~~~~~~vyiCGp-p~Mi~~v~~~L~~~ 243 (264)
T Consensus 327 ~l~~l~~AFSRd~~~-k~YVQd~i~e~~-~~v~~--ll-~~ga~iYVCG~a~~M~~~V~~~l~~i 386 (416)
T cd06204 327 GLLELVTAFSREQPK-KVYVQHRLAEHA-EQVWE--LI-NEGAYIYVCGDAKNMARDVEKTLLEI 386 (416)
T ss_pred CCEEEEEEEECCCCC-CCCHHHHHHHHH-HHHHH--HH-HCCCEEEEECCCCHHHHHHHHHHHHH
T ss_conf 945999899578988-885799999719-99999--99-87979999899641158999999999