HHsearch alignment for GI: 254780364 and conserved domain: PRK06222
>PRK06222 ferredoxin-NADP(+) reductase subunit alpha; Reviewed.
Probab=99.94 E-value=2.3e-26 Score=181.04 Aligned_cols=168 Identities=20% Similarity=0.229 Sum_probs=129.6
Q ss_pred EEEEEEECCCCEEEEEEECCCC-CCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCC-CEEEEEEECCCCCCCCCCCCCC
Q ss_conf 8989984799869999807899-9738985788031458611055643205667776-0179996157676531000022
Q gi|254780364|r 16 SVISVKHYTDRLFRFCITRPKS-FRFRSGEFVMLGLIVNGRPIFRAYSIASPCRDDK-LEFCSIKVDKGFFTTYLQNIQP 93 (224)
Q Consensus 16 ~V~~~~~~T~~~~~l~l~~p~~-~~f~aGQ~~~l~~~~~g~~~~R~ySiaS~p~~~~-~~~~i~~~~~g~~s~~l~~~~~ 93 (224)
T Consensus 3 kIl~n~~l~~~~~~l~l~ap~ia~~~~PGQFvmv~~~~~~~--r~P~Si~~~d~~~g~i~~~~~vv--G~gT~~L~~l~~ 78 (281)
T PRK06222 3 KIVEKEELAPNVFLMEIEAPRVAKKAKPGQFVIVRIDEKGE--RIPLTIADYDPEKGTITIVFQAV--GKSTKELAELKE 78 (281)
T ss_pred EEEEEEEECCCEEEEEEECHHHHHHCCCCCEEEEEECCCCC--CEEEEEEEECCCCCEEEEEEEEE--CHHHHHHHHCCC
T ss_conf 79987995498799999885257138999369999799997--20158888718899999999998--858999971779
Q ss_pred CCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 22210016887533564467688179996586808899999986530886338999940586454304888998875332
Q gi|254780364|r 94 GDTILLHKKSTGDLILDSLIPGNRLYLFSMGTGIAPFASMIRDPETYKKFDEVIITHTCGRVAELQYGIDVMHEISQDEI 173 (224)
Q Consensus 94 gd~~~~~~~p~g~f~~~~~~~~~~lvlIAgGtGiaP~~silr~~~~~~~~~~i~l~~g~R~~~dl~~~~el~~l~~~~~~ 173 (224)
T Consensus 79 Gd~i~~i~GPlG~~f~~--~~~~~~llVgGGiGiAPl~~lak~l~~~g--~~v~~~~G~r~~~~l~~~~~~~~~~~---- 150 (281)
T PRK06222 79 GDSILDVVGPLGKPSEI--EKFGTVVCVGGGVGIAPVYPIAKALKEAG--NKVITIIGARNKDLLILEDEMKAVSD---- 150 (281)
T ss_pred CCEEEEEECCCCCCCCC--CCCCEEEEECCCCCCCCHHHHHHHHHHCC--CCEEEEECCCCHHHEEHHHHHHHHCC----
T ss_conf 99983678379887045--67853999958433122799999999749--91699975697687011999997379----
Q ss_pred HCCCCCCCEEEEEEECCCCCCCCCCCHHHHH
Q ss_conf 1012468759998105788776672168785
Q gi|254780364|r 174 LKDLIGQKLKFYRTVTQEDYLYKGRITNHIL 204 (224)
Q Consensus 174 ~~~~~~~~~~~~~~isre~~~~~GrIt~~i~ 204 (224)
T Consensus 151 -------~~--~v~TdDGS~G~~G~Vtd~l~ 172 (281)
T PRK06222 151 -------EL--YVTTDDGSYGFKGFVTDLLK 172 (281)
T ss_pred -------EE--EEECCCCCCCCCCCHHHHHH
T ss_conf -------18--99826898885220568999