HHsearch alignment for GI: 254780364 and conserved domain: cd06189
>cd06189 flavin_oxioreductase NAD(P)H dependent flavin oxidoreductases use flavin as a substrate in mediating electron transfer from iron complexes or iron proteins. Structurally similar to ferredoxin reductases, but with only 15% sequence identity, flavin reductases reduce FAD, FMN, or riboflavin via NAD(P)H. Flavin is used as a substrate, rather than a tightly bound prosthetic group as in flavoenzymes; weaker binding is due to the absence of a binding site for the AMP moeity of FAD.
Probab=100.00 E-value=3.5e-40 Score=265.63 Aligned_cols=177 Identities=19% Similarity=0.289 Sum_probs=154.5
Q ss_pred EEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCC-CCCEEEEEEECCCCCCCCCCC-CC
Q ss_conf 7898998479986999980789997389857880314586110556432056677-760179996157676531000-02
Q gi|254780364|r 15 ESVISVKHYTDRLFRFCITRPKSFRFRSGEFVMLGLIVNGRPIFRAYSIASPCRD-DKLEFCSIKVDKGFFTTYLQN-IQ 92 (224)
Q Consensus 15 ~~V~~~~~~T~~~~~l~l~~p~~~~f~aGQ~~~l~~~~~g~~~~R~ySiaS~p~~-~~~~~~i~~~~~g~~s~~l~~-~~ 92 (224)
T Consensus 1 ckV~~i~~~t~dv~~l~l~~~~~~~f~pGQ~v~v~~~~~~---~R~ySi~s~p~~~~~l~l~ik~~~~G~~s~~l~~~l~ 77 (224)
T cd06189 1 CKVESIEPLNDDVYRVRLKPPAPLDFLAGQYLDLLLDDGD---KRPFSIASAPHEDGEIELHIRAVPGGSFSDYVFEELK 77 (224)
T ss_pred CEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEECCCC---EEEEEECCCCCCCCEEEEEEEEECCCCHHHHHHHCCC
T ss_conf 9888989848996999996699888789974899959987---8998616589999839999999679815889985499
Q ss_pred CCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHH
Q ss_conf 22221001688753356446768817999658680889999998653088633899994058645430488899887533
Q gi|254780364|r 93 PGDTILLHKKSTGDLILDSLIPGNRLYLFSMGTGIAPFASMIRDPETYKKFDEVIITHTCGRVAELQYGIDVMHEISQDE 172 (224)
Q Consensus 93 ~gd~~~~~~~p~g~f~~~~~~~~~~lvlIAgGtGiaP~~silr~~~~~~~~~~i~l~~g~R~~~dl~~~~el~~l~~~~~ 172 (224)
T Consensus 78 ~Gd~v~v-~gP~G~f~l~~~-~~~~~vlIAgG~GItP~~s~l~~~~~~~~~~~v~l~~g~r~~~~~~~~~el~~l~~~~~ 155 (224)
T cd06189 78 ENGLVRI-EGPLGDFFLRED-SDRPLILIAGGTGFAPIKSILEHLLAQGSKRPIHLYWGARTEEDLYLDELLEAWAEAHP 155 (224)
T ss_pred CCCEEEE-ECCCCCCCCCCC-CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCC
T ss_conf 9998999-706757411567-89858999368775539999999997599998167742699799868999999997689
Q ss_pred HHCCCCCCCEEEEEEECCCCCCC---CCCCHHHHH
Q ss_conf 21012468759998105788776---672168785
Q gi|254780364|r 173 ILKDLIGQKLKFYRTVTQEDYLY---KGRITNHIL 204 (224)
Q Consensus 173 ~~~~~~~~~~~~~~~isre~~~~---~GrIt~~i~ 204 (224)
T Consensus 156 --------~~~~~~~~s~~~~~~~~~~G~v~~~~~ 182 (224)
T cd06189 156 --------NFTYVPVLSEPEEGWQGRTGLVHEAVL 182 (224)
T ss_pred --------CEEEEEEECCCCCCCCCCCCCHHHHHH
T ss_conf --------959999975688775665580899999