HHsearch results for GI: 254780364 and protein with PDBid: 1ep3_B

>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain, alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=100.00  E-value=1.5e-32  Score=217.60  Aligned_cols=181  Identities=12%  Similarity=0.117  Sum_probs=146.4

Q ss_pred             CCCCEEEEEEEEEECCCCEEEEEEECCC-CCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCC-C
Q ss_conf             7342117898998479986999980789-9973898578803145861105564320566777601799961576765-3
Q gi|254780364|r    9 AADVYCESVISVKHYTDRLFRFCITRPK-SFRFRSGEFVMLGLIVNGRPIFRAYSIASPCRDDKLEFCSIKVDKGFFT-T   86 (224)
Q Consensus         9 p~~~~~~~V~~~~~~T~~~~~l~l~~p~-~~~f~aGQ~~~l~~~~~g~~~~R~ySiaS~p~~~~~~~~i~~~~~g~~s-~   86 (224)
                      |.---..||++++++|+++++|+|+.|. ...|+||||+.|.++..++..+|||||+|+|.++....+++++.+++.+ .
T Consensus         2 ~~~~~~~~Vv~~~~lt~~i~~l~l~~~~~~~~~~PGQfv~l~~~~~~~~~~rpySi~s~~~~~~~~~~~~kv~~~g~~t~   81 (262)
T 1ep3_B            2 SQLQEMMTVVSQREVAYNIFEMVLKGTLVDEMDLPGQFLHLAVPNGAMLLRRPISISSWDKRAKTCTILYRIGDETTGTY   81 (262)
T ss_dssp             CCSEEEEEEEEEEEEETTEEEEEEESGGGGGCCSTTCEEEECCSCTTCCSCEEEECCEEETTTTEEEEEEECCCTTSHHH
T ss_pred             CCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCCHHH
T ss_conf             98750419999999549989999978883567899952999947899189998997324899988999999889976789


Q ss_pred             CCCCCCCCCCCEECCCCCCCCC-CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHH
Q ss_conf             1000022222100168875335-644676881799965868088999999865308863389999405864543048889
Q gi|254780364|r   87 YLQNIQPGDTILLHKKSTGDLI-LDSLIPGNRLYLFSMGTGIAPFASMIRDPETYKKFDEVIITHTCGRVAELQYGIDVM  165 (224)
Q Consensus        87 ~l~~~~~gd~~~~~~~p~g~f~-~~~~~~~~~lvlIAgGtGiaP~~silr~~~~~~~~~~i~l~~g~R~~~dl~~~~el~  165 (224)
                      ++.++++||.+.+. +|.|.|+ +......++++|||||+||||++||++++...+  .++.++|++|++++++|.+|++
T Consensus        82 ~l~~l~~Gd~v~i~-gP~G~~~~~~~~~~~~~~lliagG~GiaP~~~i~~~l~~~~--~~v~l~~~~r~~~~~~~~~el~  158 (262)
T 1ep3_B           82 KLSKLESGAKVDVM-GPLGNGFPVAEVTSTDKILIIGGGIGVPPLYELAKQLEKTG--CQMTILLGFASENVKILENEFS  158 (262)
T ss_dssp             HHHTCCTTCEEEEE-EEESBCCCCTTCCTTSEEEEEEEGGGSHHHHHHHHHHHHHT--CEEEEEEEESSGGGCCCHHHHH
T ss_pred             HHHCCCCCCEEEEE-CCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCC--CCEEEEEEECCHHHHHHHHHHH
T ss_conf             98659999999998-05535643444567755999955633678999999999849--9349999978889988999998


Q ss_pred             HHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCHHHHH
Q ss_conf             988753321012468759998105788776672168785
Q gi|254780364|r  166 HEISQDEILKDLIGQKLKFYRTVTQEDYLYKGRITNHIL  204 (224)
Q Consensus       166 ~l~~~~~~~~~~~~~~~~~~~~isre~~~~~GrIt~~i~  204 (224)
                      ++.            +.+++.+..+.+..|+|++++++.
T Consensus       159 ~~~------------~~~~~~~~~d~~~~~~g~v~~~~~  185 (262)
T 1ep3_B          159 NLK------------NVTLKIATDDGSYGTKGHVGMLMN  185 (262)
T ss_dssp             TST------------TEEEEEEETTCSSSEESCHHHHHH
T ss_pred             HCC------------CCEEEEECCCCCCCCCCCHHHHHH
T ss_conf             608------------968998526888775664889876