HHsearch results for GI: 254780364 and protein with PDBid: 1f20_A
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidoreductase; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=99.91 E-value=1e-23 Score=163.48 Aligned_cols=138 Identities=20% Similarity=0.246 Sum_probs=107.6
Q ss_pred EEEEEECCCCCCCCCE--EEEEE-----------ECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEECC
Q ss_conf 5564320566777601--79996-----------1576765310000222221001688753356446768817999658
Q gi|254780364|r 58 FRAYSIASPCRDDKLE--FCSIK-----------VDKGFFTTYLQNIQPGDTILLHKKSTGDLILDSLIPGNRLYLFSMG 124 (224)
Q Consensus 58 ~R~ySiaS~p~~~~~~--~~i~~-----------~~~g~~s~~l~~~~~gd~~~~~~~p~g~f~~~~~~~~~~lvlIAgG 124 (224)
.|+|||||+|...... +.+.. ...|.+|++|+++++||.+.+..++++.|.+++. +.+++||||+|
T Consensus 210 pR~YSIaSsp~~~~~~~~l~v~v~~~~~~~~~~~~~~G~~S~~L~~l~~gd~i~v~~~~~~~F~lp~~-~~~piimIg~G 288 (435)
T 1f20_A 210 PRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRIQADDVVPCFVRGAPSFHLPRN-PQVPCILVGPG 288 (435)
T ss_dssp CEEEECCSCTTTSTTEEEEEEECCEEECGGGTSCEEECHHHHHHTTCCTTCEEEEEEECCTTSSCCSC-TTSCEEEECCG
T ss_pred CCEEECCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCC-CCCCEEEEECC
T ss_conf 64101057855579758999999987603788872500354020541589989999525777568887-76543999558
Q ss_pred CCHHHHHHHHHHHHH-----CCCCCEEEEEEECCCHH-HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCC
Q ss_conf 680889999998653-----08863389999405864-543048889988753321012468759998105788776672
Q gi|254780364|r 125 TGIAPFASMIRDPET-----YKKFDEVIITHTCGRVA-ELQYGIDVMHEISQDEILKDLIGQKLKFYRTVTQEDYLYKGR 198 (224)
Q Consensus 125 tGiaP~~silr~~~~-----~~~~~~i~l~~g~R~~~-dl~~~~el~~l~~~~~~~~~~~~~~~~~~~~isre~~~~~Gr 198 (224)
||||||+||+++... ....++++|+||+|+.+ |++|.+|+.++.... .+++++++.||++..++++
T Consensus 289 TGIAPfrsflq~r~~~~~~~~~~~~~~~L~fG~r~~~~d~ly~eel~~~~~~~--------~~~~~~~afSRd~~~~k~Y 360 (435)
T 1f20_A 289 TGIAPFRSFWQQRQFDIQHKGMNPCPMVLVFGCRQSKIDHIYREETLQAKNKG--------VFRELYTAYSREPDRPKKY 360 (435)
T ss_dssp GGGHHHHHHHHHHHHHHHHHCCCCCCEEEEEEESCTTTSCTTHHHHHHHHHTT--------SEEEEEEEESSCTTSCCCC
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCC--------CCEEEEEEECCCCCCCCCC
T ss_conf 67227999999999876630567898699998245136678789999998469--------9769999975786899866
Q ss_pred CHHHHH
Q ss_conf 168785
Q gi|254780364|r 199 ITNHIL 204 (224)
Q Consensus 199 It~~i~ 204 (224)
|++.|.
T Consensus 361 VQd~l~ 366 (435)
T 1f20_A 361 VQDVLQ 366 (435)
T ss_dssp HHHHHH
T ss_pred CCCHHH
T ss_conf 376887