HHsearch results for GI: 254780364 and protein with PDBid: 1gvh_A
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=100.00 E-value=9.8e-36 Score=237.11 Aligned_cols=174 Identities=15% Similarity=0.182 Sum_probs=150.9
Q ss_pred CCCEEEEEEEEEECCCCEEEEEEECCCC---CCCCCCCEEEECCCCCCC--CEEEEEEECCCCCCCCCEEEEEEECCCCC
Q ss_conf 3421178989984799869999807899---973898578803145861--10556432056677760179996157676
Q gi|254780364|r 10 ADVYCESVISVKHYTDRLFRFCITRPKS---FRFRSGEFVMLGLIVNGR--PIFRAYSIASPCRDDKLEFCSIKVDKGFF 84 (224)
Q Consensus 10 ~~~~~~~V~~~~~~T~~~~~l~l~~p~~---~~f~aGQ~~~l~~~~~g~--~~~R~ySiaS~p~~~~~~~~i~~~~~g~~ 84 (224)
..+-+.+|++++++|+++.+|+|+.+++ ++|+||||+.|+++..|. ..+|+|||+|+|.++.++++|++.++|.+
T Consensus 150 ~~~r~~~V~~~~~~t~~i~~~~l~~~dg~~~~~f~pGQ~v~v~~~~~~~~~~~~r~ysias~p~~~~~~i~Vk~~~~G~~ 229 (396)
T 1gvh_A 150 EGTRDFRIVAKTPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPDGKGYRIAVKREEGGQV 229 (396)
T ss_dssp SSEEEEEEEEEEECSSSEEEEEEEETTCCCCCCCCTTCEEEEEECCTTCSSCEEEEEECCSCCCSSCEEEEEECCTTCHH
T ss_pred CCCEEEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEEEEECCCCH
T ss_conf 67678999999995898499999878988688979997179998128976741574066108998969999999448986
Q ss_pred CCCCCC-CCCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHH
Q ss_conf 531000-0222221001688753356446768817999658680889999998653088633899994058645430488
Q gi|254780364|r 85 TTYLQN-IQPGDTILLHKKSTGDLILDSLIPGNRLYLFSMGTGIAPFASMIRDPETYKKFDEVIITHTCGRVAELQYGID 163 (224)
Q Consensus 85 s~~l~~-~~~gd~~~~~~~p~g~f~~~~~~~~~~lvlIAgGtGiaP~~silr~~~~~~~~~~i~l~~g~R~~~dl~~~~e 163 (224)
|++|++ +++||.+.+ .+|.|.|.++.. ..++++||||||||||++||+++++..+..++++|+||+|+.++++|.+|
T Consensus 230 S~~L~~~l~~Gd~v~v-~gP~G~~~~~~~-~~~~lvlIAgGtGItP~~s~l~~l~~~~~~~~v~L~~g~r~~~~~~~~~e 307 (396)
T 1gvh_A 230 SNWLHNHANVGDVVKL-VAPAGDFFMAVA-DDTPVTLISAGVGQTPMLAMLDTLAKAGHTAQVNWFHAAENGDVHAFADE 307 (396)
T ss_dssp HHHHHHTCCTTCEEEE-EEEECSCCCCCC-TTCCEEEEEEGGGGHHHHHHHHHHHHHTCCSCEEEEEEESCTTTCCSHHH
T ss_pred HHHHHHHCCCCCEEEE-ECCCCCCCCCCC-CCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHH
T ss_conf 8899863899999985-046565121688-88847999468788848899999997414541021334689899998999
Q ss_pred HHHHHHHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf 899887533210124687599981057887
Q gi|254780364|r 164 VMHEISQDEILKDLIGQKLKFYRTVTQEDY 193 (224)
Q Consensus 164 l~~l~~~~~~~~~~~~~~~~~~~~isre~~ 193 (224)
|.+|+++++ ||+++++++++..
T Consensus 308 L~~l~~~~~--------~~~~~~~~s~~~~ 329 (396)
T 1gvh_A 308 VKELGQSLP--------RFTAHTWYRQPSE 329 (396)
T ss_dssp HHHHHHTSS--------SEEEEEEESSCCH
T ss_pred HHHHHHHCC--------CEEEEEEECCCCC
T ss_conf 999998679--------8599999876874