HHsearch results for GI: 254780364 and protein with PDBid: 1qfj_A
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfamily, oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=100.00 E-value=1.8e-37 Score=247.74 Aligned_cols=179 Identities=18% Similarity=0.215 Sum_probs=154.9
Q ss_pred CEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCC-CCEEEEEEECCCCCCCCCC-
Q ss_conf 21178989984799869999807899973898578803145861105564320566777-6017999615767653100-
Q gi|254780364|r 12 VYCESVISVKHYTDRLFRFCITRPKSFRFRSGEFVMLGLIVNGRPIFRAYSIASPCRDD-KLEFCSIKVDKGFFTTYLQ- 89 (224)
Q Consensus 12 ~~~~~V~~~~~~T~~~~~l~l~~p~~~~f~aGQ~~~l~~~~~g~~~~R~ySiaS~p~~~-~~~~~i~~~~~g~~s~~l~- 89 (224)
..++||++++++|+++++|+|..++.++|+||||+.|.+++. .+|+|||+|+|.++ .++++|++..+|.++++++
T Consensus 2 tl~~~V~~v~~lt~~v~~i~l~~~~~~~~~pGQ~v~l~~~~~---~~R~ySias~~~~~~~l~~~Ik~~~~g~~s~~l~~ 78 (232)
T 1qfj_A 2 TLSCKVTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVVMDER---DKRPFSMASTPDEKGFIELHIGASEINLYAKAVMD 78 (232)
T ss_dssp EEEEEEEEEEESSSSCEEEEEEESSCCCCCTTCEEEEESSSS---CEEEEECCSCTTSTTCEEEEEC------CCHHHHH
T ss_pred CEEEEEEEEEEECCCEEEEEEECCCCCCCCCCCEEEEECCCC---CEEEEEEEECCCCCCEEEEEEEECCCCCCHHHHHH
T ss_conf 487999999990899199999889988829996799996999---87999887279998689999995589995034586
Q ss_pred CCCCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 00222221001688753356446768817999658680889999998653088633899994058645430488899887
Q gi|254780364|r 90 NIQPGDTILLHKKSTGDLILDSLIPGNRLYLFSMGTGIAPFASMIRDPETYKKFDEVIITHTCGRVAELQYGIDVMHEIS 169 (224)
Q Consensus 90 ~~~~gd~~~~~~~p~g~f~~~~~~~~~~lvlIAgGtGiaP~~silr~~~~~~~~~~i~l~~g~R~~~dl~~~~el~~l~~ 169 (224)
++++||.+.+ .+|+|.|.+... +.++++||||||||||++||+++++..+..++++|+||+|+.+|++|.+|+++|.+
T Consensus 79 ~l~~Gd~v~i-~gP~G~~~~~~~-~~~~~v~iAgG~GitP~~s~l~~~~~~~~~~~v~l~~~~r~~~~~~~~~el~~l~~ 156 (232)
T 1qfj_A 79 RILKDHQIVV-DIPHGEAWLRDD-EERPMILIAGGTGFSYARSILLTALARNPNRDITIYWGGREEQHLYDLCELEALSL 156 (232)
T ss_dssp HHHHHSEEEE-EEEECSCCCCSC-SSSCEEEEEETTCHHHHHHHHHHHHHHCTTCCEEEEEEESSGGGCTTHHHHHHHHH
T ss_pred HCCCCCEEEE-ECCCCCCEECCC-CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 3799999999-446567530554-56638999469850439999999997199954999941157788788999999998
Q ss_pred HHHHHCCCCCCCEEEEEEECCCCCCC---CCCCHHHH
Q ss_conf 53321012468759998105788776---67216878
Q gi|254780364|r 170 QDEILKDLIGQKLKFYRTVTQEDYLY---KGRITNHI 203 (224)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~isre~~~~---~GrIt~~i 203 (224)
+++ ||+|++++|+++..| +|||++.+
T Consensus 157 ~~~--------~~~~~~~~~~~~~~~~~~~G~v~~~~ 185 (232)
T 1qfj_A 157 KHP--------GLQVVPVVEQPEAGWRGRTGTVLTAV 185 (232)
T ss_dssp HCT--------TEEEEEEESSCCTTCCSEESCHHHHH
T ss_pred HCC--------CEEEEEEECCCCCCCCCCEEEHHHHH
T ss_conf 689--------96999998678655487160178999