HHsearch results for GI: 254780364 and protein with PDBid: 1tvc_A

>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=100.00  E-value=1.1e-36  Score=243.03  Aligned_cols=183  Identities=21%  Similarity=0.304  Sum_probs=154.4

Q ss_pred             CCCCEEEEEEEEEECCCCEEEEEEECCC------CCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCC-CCEEEEEEECC
Q ss_conf             7342117898998479986999980789------9973898578803145861105564320566777-60179996157
Q gi|254780364|r    9 AADVYCESVISVKHYTDRLFRFCITRPK------SFRFRSGEFVMLGLIVNGRPIFRAYSIASPCRDD-KLEFCSIKVDK   81 (224)
Q Consensus         9 p~~~~~~~V~~~~~~T~~~~~l~l~~p~------~~~f~aGQ~~~l~~~~~g~~~~R~ySiaS~p~~~-~~~~~i~~~~~   81 (224)
                      ..+.|+++|++++.+|+++++|+|+.|+      +++|+||||+.|.+++  +.++|+|||+|.|.++ .++++|+++++
T Consensus         7 ~~~~~~a~V~~~~~~~~~v~~~~l~~~~~~~~~~~~~f~pGQ~v~l~~~g--~~~~R~YSias~p~~~~~i~l~Ik~~~~   84 (250)
T 1tvc_A            7 EVGSFEAEVVGLNWVSSNTVQFLLQKRPDECGNRGVKFEPGQFMDLTIPG--TDVSRSYSPANLPNPEGRLEFLIRVLPE   84 (250)
T ss_dssp             CSSEEEEEBCCCEEEETTEEEEEECSSTTSSSSSCCSCCSCCEEEECTTS--CSSSEEECCBCCSSSSCCEEEEECCCTT
T ss_pred             CEEEEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECC--CCCEEEEEECCCCCCCCEEEEEEEECCC
T ss_conf             30058999999996189959999993770025777879999159999899--5703776746888999889999997799


Q ss_pred             CCCCCCCCC-CCCCCCCEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHH
Q ss_conf             676531000-0222221001688753356446768817999658680889999998653088633899994058645430
Q gi|254780364|r   82 GFFTTYLQN-IQPGDTILLHKKSTGDLILDSLIPGNRLYLFSMGTGIAPFASMIRDPETYKKFDEVIITHTCGRVAELQY  160 (224)
Q Consensus        82 g~~s~~l~~-~~~gd~~~~~~~p~g~f~~~~~~~~~~lvlIAgGtGiaP~~silr~~~~~~~~~~i~l~~g~R~~~dl~~  160 (224)
                      |.+|++|++ +++|+.+.+ .+|.|.|.+.+. ..++++||||||||||++||+++++..+..++++|+|++|+.+|++|
T Consensus        85 G~~S~~l~~~l~~G~~v~i-~gP~G~~~~~~~-~~~~ivliagG~GiaP~~s~l~~l~~~~~~~~v~l~~~~r~~~~~~~  162 (250)
T 1tvc_A           85 GRFSDYLRNDARVGQVLSV-KGPLGVFGLKER-GMAPRYFVAGGTGLAPVVSMVRQMQEWTAPNETRIYFGVNTEPELFY  162 (250)
T ss_dssp             SSSHHHHHHHSSSSSEEEE-EEEECCCSCCCC-SSSCEEEEEESSTTHHHHHHHHHHHHHTCCSCEEEEEECSSSTTCCC
T ss_pred             CCCCHHHHHCCCCCCEEEE-ECCCCCCCCCCC-CCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHH
T ss_conf             9732126546789988999-537887524788-87878999778771667799999986177652043012477556678


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC---CCCCHHHH
Q ss_conf             48889988753321012468759998105788776---67216878
Q gi|254780364|r  161 GIDVMHEISQDEILKDLIGQKLKFYRTVTQEDYLY---KGRITNHI  203 (224)
Q Consensus       161 ~~el~~l~~~~~~~~~~~~~~~~~~~~isre~~~~---~GrIt~~i  203 (224)
                      .+||.+|+++++        ||++..+++++...|   .|++++.+
T Consensus       163 ~~el~~l~~~~~--------~~~~~~~~~~~~~~~~~~~g~~~~~~  200 (250)
T 1tvc_A          163 IDELKSLERSMR--------NLTVKACVWHPSGDWEGEQGSPIDAL  200 (250)
T ss_dssp             HHHHHHHHHHSS--------SCEEEECCSSCSSCCSSSSSSSSHHH
T ss_pred             HHHHHHHHHHCC--------CEEEEEEEECCCCCCCCCCCCHHHHH
T ss_conf             999999998689--------70899999706987465357379999