HHsearch results for GI: 254780364 and protein with PDBid: 3lyu_A
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=99.42 E-value=2.9e-14 Score=105.66 Aligned_cols=91 Identities=7% Similarity=-0.009 Sum_probs=65.4
Q ss_pred EECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 00168875335644676881799965868088999999865308863389999405864543048889988753321012
Q gi|254780364|r 98 LLHKKSTGDLILDSLIPGNRLYLFSMGTGIAPFASMIRDPETYKKFDEVIITHTCGRVAELQYGIDVMHEISQDEILKDL 177 (224)
Q Consensus 98 ~~~~~p~g~f~~~~~~~~~~lvlIAgGtGiaP~~silr~~~~~~~~~~i~l~~g~R~~~dl~~~~el~~l~~~~~~~~~~ 177 (224)
+-+.||.|.|+..+ ..++++||||||||||++||++.+...+ +..++|++|+.++++|.+||+++..++
T Consensus 3 l~v~GP~G~~~~~~--~~~~vvlIagG~GiaP~~si~~~l~~~~---~~~~~~~~r~~~~~~~~~el~~~~~~~------ 71 (142)
T 3lyu_A 3 LNVAGPLGTPVPME--KFGKILAIGAYTGIVEVYPIAKAWQEIG---NDVTTLHVTFEPMVILKEELEKAVTRH------ 71 (142)
T ss_dssp ----CCCSCCBCCC--CCSEEEEEEETTHHHHHHHHHHHHHHTT---CEEEEEEEEEGGGCCSHHHHHTTSSEE------
T ss_pred EEEECCCCCCCCCC--CCCEEEEEEECEEHHHHHHHHHHHHHCC---CEEEEEEECCHHHHHHHHHHHHHHHCC------
T ss_conf 87977877887548--8976999991354547899999999769---969997014858878999998776426------
Q ss_pred CCCCEEEEEEECCCCC---CCCCCCHHHHH
Q ss_conf 4687599981057887---76672168785
Q gi|254780364|r 178 IGQKLKFYRTVTQEDY---LYKGRITNHIL 204 (224)
Q Consensus 178 ~~~~~~~~~~isre~~---~~~GrIt~~i~ 204 (224)
....+....+. ...|++++.+.
T Consensus 72 -----~~~~~~~~~~~~~~~~~~~v~~~l~ 96 (142)
T 3lyu_A 72 -----IVEPVPLNPNQDFLANMKNVSQRLK 96 (142)
T ss_dssp -----EEEEECCCTTSCHHHHHHHHHHHHH
T ss_pred -----CEEEEEEECCCCCCCCCCCCCHHHH
T ss_conf -----4256665225434587783445899