HHsearch results for GI: 254780364 and protein with PDBid: 3lyu_A

>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=99.42  E-value=2.9e-14  Score=105.66  Aligned_cols=91  Identities=7%  Similarity=-0.009  Sum_probs=65.4

Q ss_pred             EECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             00168875335644676881799965868088999999865308863389999405864543048889988753321012
Q gi|254780364|r   98 LLHKKSTGDLILDSLIPGNRLYLFSMGTGIAPFASMIRDPETYKKFDEVIITHTCGRVAELQYGIDVMHEISQDEILKDL  177 (224)
Q Consensus        98 ~~~~~p~g~f~~~~~~~~~~lvlIAgGtGiaP~~silr~~~~~~~~~~i~l~~g~R~~~dl~~~~el~~l~~~~~~~~~~  177 (224)
                      +-+.||.|.|+..+  ..++++||||||||||++||++.+...+   +..++|++|+.++++|.+||+++..++      
T Consensus         3 l~v~GP~G~~~~~~--~~~~vvlIagG~GiaP~~si~~~l~~~~---~~~~~~~~r~~~~~~~~~el~~~~~~~------   71 (142)
T 3lyu_A            3 LNVAGPLGTPVPME--KFGKILAIGAYTGIVEVYPIAKAWQEIG---NDVTTLHVTFEPMVILKEELEKAVTRH------   71 (142)
T ss_dssp             ----CCCSCCBCCC--CCSEEEEEEETTHHHHHHHHHHHHHHTT---CEEEEEEEEEGGGCCSHHHHHTTSSEE------
T ss_pred             EEEECCCCCCCCCC--CCCEEEEEEECEEHHHHHHHHHHHHHCC---CEEEEEEECCHHHHHHHHHHHHHHHCC------
T ss_conf             87977877887548--8976999991354547899999999769---969997014858878999998776426------


Q ss_pred             CCCCEEEEEEECCCCC---CCCCCCHHHHH
Q ss_conf             4687599981057887---76672168785
Q gi|254780364|r  178 IGQKLKFYRTVTQEDY---LYKGRITNHIL  204 (224)
Q Consensus       178 ~~~~~~~~~~isre~~---~~~GrIt~~i~  204 (224)
                           ....+....+.   ...|++++.+.
T Consensus        72 -----~~~~~~~~~~~~~~~~~~~v~~~l~   96 (142)
T 3lyu_A           72 -----IVEPVPLNPNQDFLANMKNVSQRLK   96 (142)
T ss_dssp             -----EEEEECCCTTSCHHHHHHHHHHHHH
T ss_pred             -----CEEEEEEECCCCCCCCCCCCCHHHH
T ss_conf             -----4256665225434587783445899