RPSBLAST alignment for GI: 254780364 and conserved domain: cd06213
>gnl|CDD|99809 cd06213, oxygenase_e_transfer_subunit, The oxygenase reductase FAD/NADH binding domain acts as part of the multi-component bacterial oxygenases which oxidize hydrocarbons. Electron transfer is from NADH via FAD (in the oxygenase reductase) and an [2FE-2S] ferredoxin center (fused to the FAD/NADH domain and/or discrete) to the oxygenase. Dioxygenases add both atoms of oxygen to the substrate while mono-oxygenases add one atom to the substrate and one atom to water. In dioxygenases, Class I enzymes are 2 component, containing a reductase with Rieske type [2Fe-2S] redox centers and an oxygenase. Class II are 3 component, having discrete flavin and ferredoxin proteins and an oxygenase. Class III have 2 [2Fe-2S] centers, one fused to the flavin domain and the other separate.. Length = 227
Score = 37.3 bits (87), Expect = 0.004
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 16 SVISVKHYTDRLFRFCITRPKSFRFRSGEFVMLGLIVNGRPIFRAYSIA-SPCRDDKLEF 74
++++ + T + R + + +++G++ L L G P R+YS A +P D +L F
Sbjct: 4 TIVAQERLTHDIVRLTVQLDRPIAYKAGQYAELTL--PGLPAARSYSFANAPQGDGQLSF 61
Query: 75 CSIKVDKGFFTTYLQN-IQPGDTILLHKKSTGDLILDSLIPGNR-LYLFSMGTGIAPFAS 132
KV G F+ +L + G+ + + + GD L PG+ + + G+G+AP +
Sbjct: 62 HIRKVPGGAFSGWLFGADRTGERLTV-RGPFGDFWLR---PGDAPILCIAGGSGLAPILA 117
Query: 133 MIRD 136
++
Sbjct: 118 ILEQ 121