HHsearch alignment for GI: 254780365 and conserved domain: COG0448
>COG0448 GlgC ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism].
Probab=100.00 E-value=1.7e-44 Score=293.84 Aligned_cols=253 Identities=21% Similarity=0.332 Sum_probs=200.4
Q ss_pred CEEEEECCCCCCCCCHHHCCCCCCEEEECCE-EHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHCCC
Q ss_conf 5899956888833432440888333568836-279999999997899889998135544410100117454445654187
Q gi|254780365|r 8 RKAVFPIAGLGMRFFPISKVIPKEMLAIVDR-PVIQYVIEEALEAGLTDFVFVTGRGKGLIKDYFDIQFELEQSLRKRNK 86 (299)
Q Consensus 8 ~KavIlAaG~GtRl~P~T~~~pKpllpi~~k-piI~~~i~~l~~~Gi~~i~iv~~~~k~~I~~~f~~~~~~~~~l~~~~~ 86 (299)
T Consensus 6 ~laiILaGg~G~rL~~LT~~RakpAVpFgGkYRiIDF~LSN~vNSGi~~I~VltQy~~~SL~~Hi~~G~~w----~l~~~ 81 (393)
T COG0448 6 VLAIILAGGRGSRLSPLTKDRAKPAVPFGGKYRIIDFALSNCVNSGIRRIGVLTQYKSHSLNDHIGRGWPW----DLDRK 81 (393)
T ss_pred EEEEEECCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCC----CCCCC
T ss_conf 69999758987755224547503444427646898677000010388769999435536799986289865----66555
Q ss_pred CEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE-
Q ss_conf 00001134411248579984333423346654211011223---33311127864445443322112221223432200-
Q gi|254780365|r 87 KAELTLLAESIPSIGNAVFTWQYERKGLGHAVWCARNIIGD---NPFALLLPDMIMSPLEGENCMANMIKLYEKEGANI- 162 (299)
Q Consensus 87 ~~~~~~~~~~~~~~~~i~~v~Q~~p~Gtg~Ai~~a~~~i~d---e~flv~~gD~i~~~~~~~~~l~~li~~~~~~~~~v- 162 (299)
T Consensus 82 ~~~v~ilp~~~~~~~~~wy------~Gtadai~Qnl~~i~~~~~eyvlIlsgDhIYkmD-----y~~ml~~H~~~gadiT 150 (393)
T COG0448 82 NGGVFILPAQQREGGERWY------EGTADAIYQNLLIIRRSDPEYVLILSGDHIYKMD-----YSDMLDFHIESGADVT 150 (393)
T ss_pred CCCEEEECCHHCCCCCCCE------ECCHHHHHHHHHHHHHCCCCEEEEECCCEEEECC-----HHHHHHHHHHCCCCEE
T ss_conf 5847995711125787312------0447999976899974398889995287789448-----9999999998199879
Q ss_pred EEEEECCHHHCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCC-EEECHHHEECHHHH-HHHCCCCCC-CCCCCCCHH
Q ss_conf 112432854433133100133333353000000257788867342-33020200272331-100012266-676750037
Q gi|254780365|r 163 LAVSECDPQLSCKYGMVQVGKAIDHQVFHISDMIEKPDSSTFISN-FFINGRYILHPDIF-SILNDWKEN-EGKGEIQLT 239 (299)
Q Consensus 163 i~~~~v~~~~~~~yGvi~~~~~~~~~~~~I~~~vEKP~~~~~~Sn-l~~~GiYi~~~~i~-~~L~~~~~~-~~~gE~~lt 239 (299)
T Consensus 151 v~~~~Vp~~eas~fGim~~D~~~-----~i~~F~eKp~~-~~~~~~laSMgiYIf~~~~L~~~L~~~~~~~~~~~Df-gk 223 (393)
T COG0448 151 VAVKEVPREEASRFGVMNVDENG-----RIIEFVEKPAD-GPPSNSLASMGIYIFNTDLLKELLEEDAKDPNSSHDF-GK 223 (393)
T ss_pred EEEEECCHHHHHHCCCEEECCCC-----CEEEEEECCCC-CCCCCCEEEEEEEEECHHHHHHHHHHHHCCCCCCCCH-HH
T ss_conf 99998796760024815887999-----78873526676-8866531355669982999999999874166773310-67
Q ss_pred HHHHHHHHCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHCCHH
Q ss_conf 8999998319848999813786439988999999998631834
Q gi|254780365|r 240 DSMRKLSERHDFLAYHFKGHTYDCGSKKGFVLANIAFALARQD 282 (299)
Q Consensus 240 D~i~~l~~~~~v~a~~~~g~w~DiG~~~~yl~A~~~~al~~~~ 282 (299)
T Consensus 224 diIp~~~~~~~v~AY~f~gYw~dVgTi~syy~aNmdLl~~~~~ 266 (393)
T COG0448 224 DIIPKLLERGKVYAYEFSGYWRDVGTIDSYYEANMDLLSPQPE 266 (393)
T ss_pred HHHHHHHHCCCEEEEECCCHHHHCCCHHHHHHHHHHHCCCCCC
T ss_conf 7889887508777874256665266399999843876289975