HHsearch alignment for GI: 254780365 and conserved domain: COG0836
>COG0836 {ManC} Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane].
Probab=99.91 E-value=2.6e-25 Score=175.72 Aligned_cols=241 Identities=20% Similarity=0.261 Sum_probs=157.6
Q ss_pred EEEEECCCCCCCCCHHHCC-CCCCEEEE-CCEEHHHHHHHHHHH-CCCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHCC
Q ss_conf 8999568888334324408-88333568-836279999999997-89988999813554441010011745444565418
Q gi|254780365|r 9 KAVFPIAGLGMRFFPISKV-IPKEMLAI-VDRPVIQYVIEEALE-AGLTDFVFVTGRGKGLIKDYFDIQFELEQSLRKRN 85 (299)
Q Consensus 9 KavIlAaG~GtRl~P~T~~-~pKpllpi-~~kpiI~~~i~~l~~-~Gi~~i~iv~~~~k~~I~~~f~~~~~~~~~l~~~~ 85 (299)
T Consensus 3 ~pvIlaGG~GsRLWPLSR~~~PKQFl~L~~~~Sllq~T~~R~~~l~~~~~~~vVtne~------~~---f~v~eql~e~- 72 (333)
T COG0836 3 IPVILAGGSGSRLWPLSRKDYPKQFLKLFGDLSLLQQTVKRLAFLGDIEEPLVVTNEK------YR---FIVKEQLPEI- 72 (333)
T ss_pred EEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEEEEECHH------HH---HHHHHHHHHH-
T ss_conf 2599707876536876754377230341799718999999875147856609995779------99---9999986641-
Q ss_pred CCEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCC
Q ss_conf 7000011344112485799843334233466542110112----233331112786444544-33221122212234322
Q gi|254780365|r 86 KKAELTLLAESIPSIGNAVFTWQYERKGLGHAVWCARNII----GDNPFALLLPDMIMSPLE-GENCMANMIKLYEKEGA 160 (299)
Q Consensus 86 ~~~~~~~~~~~~~~~~~i~~v~Q~~p~Gtg~Ai~~a~~~i----~de~flv~~gD~i~~~~~-~~~~l~~li~~~~~~~~ 160 (299)
T Consensus 73 ------------~~~~~~~illEP~gRnTApAIA~aa~~~~~~~~d~~~lVlpsDH~I~d~~af~~av~~A~~~A~~g~l 140 (333)
T COG0836 73 ------------DIENAAGIILEPEGRNTAPAIALAALSATAEGGDALVLVLPSDHVIADEEAFLNAVKKAEKAAEEGGI 140 (333)
T ss_pred ------------HHCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEECCHHHHHHHHHHHHHHHHCCCE
T ss_conf ------------01256606854578774999999999998758983899944755655689999999999999971987
Q ss_pred CEEEEEECCHHHCCCCCCEECCCCCCC-CCCEEEEECCCCCCCCCCCC------EEECHHHEECHHH-HHHHCCCCCCC-
Q ss_conf 001124328544331331001333333-53000000257788867342------3302020027233-11000122666-
Q gi|254780365|r 161 NILAVSECDPQLSCKYGMVQVGKAIDH-QVFHISDMIEKPDSSTFISN------FFINGRYILHPDI-FSILNDWKENE- 231 (299)
Q Consensus 161 ~vi~~~~v~~~~~~~yGvi~~~~~~~~-~~~~I~~~vEKP~~~~~~Sn------l~~~GiYi~~~~i-~~~L~~~~~~~- 231 (299)
T Consensus 141 VTfGI~Pt~PeT--GYGYIe~G~~~~~~~~~~V~~FvEKPd~etA~~yv~sG~y~WNSGmF~Fra~~~l~e~~~~~P~i~ 218 (333)
T COG0836 141 VTFGIPPTRPET--GYGYIETGESIAENGVYKVDRFVEKPDLETAKKYVESGEYLWNSGMFLFRASVFLEELKKHQPDIY 218 (333)
T ss_pred EEEECCCCCCCC--CCCEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHCCCEEEECCCEEEEHHHHHHHHHHHCCHHH
T ss_conf 998327898866--741463286245678257555313887899999997396576323168888999999986090999
Q ss_pred ---------C---------CCCCCHHH--HHHHH-HHC-CCEEEEEEEEEEEECCCHHHHHHHH
Q ss_conf ---------7---------67500378--99999-831-9848999813786439988999999
Q gi|254780365|r 232 ---------G---------KGEIQLTD--SMRKL-SER-HDFLAYHFKGHTYDCGSKKGFVLAN 273 (299)
Q Consensus 232 ---------~---------~gE~~ltD--~i~~l-~~~-~~v~a~~~~g~w~DiG~~~~yl~A~ 273 (299)
T Consensus 219 ~~~~~~~~~~~d~~~~~l~~e~f~~~p~iSIDYAiMEkt~~~aVVp~~f~WsDlGsW~Al~~~~ 282 (333)
T COG0836 219 CAAEKAFEAAVDENSVRLDNEAYEEIPAISIDYAIMEKTSKAAVVPADFGWSDLGSWHALWEVL 282 (333)
T ss_pred HHHHHHHHCCCCCCHHHCCHHHHHHCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHH
T ss_conf 9999987440334221004888744831220378774116648995678856556789999875