HHsearch alignment for GI: 254780365 and conserved domain: COG0836

>COG0836 {ManC} Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane].
Probab=99.91  E-value=2.6e-25  Score=175.72  Aligned_cols=241  Identities=20%  Similarity=0.261  Sum_probs=157.6

Q ss_pred             EEEEECCCCCCCCCHHHCC-CCCCEEEE-CCEEHHHHHHHHHHH-CCCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHCC
Q ss_conf             8999568888334324408-88333568-836279999999997-89988999813554441010011745444565418
Q gi|254780365|r    9 KAVFPIAGLGMRFFPISKV-IPKEMLAI-VDRPVIQYVIEEALE-AGLTDFVFVTGRGKGLIKDYFDIQFELEQSLRKRN   85 (299)
Q Consensus         9 KavIlAaG~GtRl~P~T~~-~pKpllpi-~~kpiI~~~i~~l~~-~Gi~~i~iv~~~~k~~I~~~f~~~~~~~~~l~~~~   85 (299)
T Consensus         3 ~pvIlaGG~GsRLWPLSR~~~PKQFl~L~~~~Sllq~T~~R~~~l~~~~~~~vVtne~------~~---f~v~eql~e~-   72 (333)
T COG0836           3 IPVILAGGSGSRLWPLSRKDYPKQFLKLFGDLSLLQQTVKRLAFLGDIEEPLVVTNEK------YR---FIVKEQLPEI-   72 (333)
T ss_pred             EEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEEEEECHH------HH---HHHHHHHHHH-
T ss_conf             2599707876536876754377230341799718999999875147856609995779------99---9999986641-


Q ss_pred             CCEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCC
Q ss_conf             7000011344112485799843334233466542110112----233331112786444544-33221122212234322
Q gi|254780365|r   86 KKAELTLLAESIPSIGNAVFTWQYERKGLGHAVWCARNII----GDNPFALLLPDMIMSPLE-GENCMANMIKLYEKEGA  160 (299)
Q Consensus        86 ~~~~~~~~~~~~~~~~~i~~v~Q~~p~Gtg~Ai~~a~~~i----~de~flv~~gD~i~~~~~-~~~~l~~li~~~~~~~~  160 (299)
T Consensus        73 ------------~~~~~~~illEP~gRnTApAIA~aa~~~~~~~~d~~~lVlpsDH~I~d~~af~~av~~A~~~A~~g~l  140 (333)
T COG0836          73 ------------DIENAAGIILEPEGRNTAPAIALAALSATAEGGDALVLVLPSDHVIADEEAFLNAVKKAEKAAEEGGI  140 (333)
T ss_pred             ------------HHCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEECCHHHHHHHHHHHHHHHHCCCE
T ss_conf             ------------01256606854578774999999999998758983899944755655689999999999999971987


Q ss_pred             CEEEEEECCHHHCCCCCCEECCCCCCC-CCCEEEEECCCCCCCCCCCC------EEECHHHEECHHH-HHHHCCCCCCC-
Q ss_conf             001124328544331331001333333-53000000257788867342------3302020027233-11000122666-
Q gi|254780365|r  161 NILAVSECDPQLSCKYGMVQVGKAIDH-QVFHISDMIEKPDSSTFISN------FFINGRYILHPDI-FSILNDWKENE-  231 (299)
Q Consensus       161 ~vi~~~~v~~~~~~~yGvi~~~~~~~~-~~~~I~~~vEKP~~~~~~Sn------l~~~GiYi~~~~i-~~~L~~~~~~~-  231 (299)
T Consensus       141 VTfGI~Pt~PeT--GYGYIe~G~~~~~~~~~~V~~FvEKPd~etA~~yv~sG~y~WNSGmF~Fra~~~l~e~~~~~P~i~  218 (333)
T COG0836         141 VTFGIPPTRPET--GYGYIETGESIAENGVYKVDRFVEKPDLETAKKYVESGEYLWNSGMFLFRASVFLEELKKHQPDIY  218 (333)
T ss_pred             EEEECCCCCCCC--CCCEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHCCCEEEECCCEEEEHHHHHHHHHHHCCHHH
T ss_conf             998327898866--741463286245678257555313887899999997396576323168888999999986090999


Q ss_pred             ---------C---------CCCCCHHH--HHHHH-HHC-CCEEEEEEEEEEEECCCHHHHHHHH
Q ss_conf             ---------7---------67500378--99999-831-9848999813786439988999999
Q gi|254780365|r  232 ---------G---------KGEIQLTD--SMRKL-SER-HDFLAYHFKGHTYDCGSKKGFVLAN  273 (299)
Q Consensus       232 ---------~---------~gE~~ltD--~i~~l-~~~-~~v~a~~~~g~w~DiG~~~~yl~A~  273 (299)
T Consensus       219 ~~~~~~~~~~~d~~~~~l~~e~f~~~p~iSIDYAiMEkt~~~aVVp~~f~WsDlGsW~Al~~~~  282 (333)
T COG0836         219 CAAEKAFEAAVDENSVRLDNEAYEEIPAISIDYAIMEKTSKAAVVPADFGWSDLGSWHALWEVL  282 (333)
T ss_pred             HHHHHHHHCCCCCCHHHCCHHHHHHCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHH
T ss_conf             9999987440334221004888744831220378774116648995678856556789999875