HHsearch alignment for GI: 254780365 and conserved domain: PRK00560

>PRK00560 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional.
Probab=98.97  E-value=6.8e-09  Score=74.65  Aligned_cols=178  Identities=15%  Similarity=0.130  Sum_probs=100.6

Q ss_pred             CEEEEECCCCCCCCCHHHCCCCCCEEEECCEE-HHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHCCC
Q ss_conf             58999568888334324408883335688362-79999999997899889998135544410100117454445654187
Q gi|254780365|r    8 RKAVFPIAGLGMRFFPISKVIPKEMLAIVDRP-VIQYVIEEALEAGLTDFVFVTGRGKGLIKDYFDIQFELEQSLRKRNK   86 (299)
Q Consensus         8 ~KavIlAaG~GtRl~P~T~~~pKpllpi~~kp-iI~~~i~~l~~~Gi~~i~iv~~~~k~~I~~~f~~~~~~~~~l~~~~~   86 (299)
T Consensus         9 I~~vILAGGkSsRm-----G~dKall~~~g~~~Lie~~~~~l~~~-~~~i~is~~~~~~---~-~~--------------   64 (196)
T PRK00560          9 IPCVILAGGKSSRM-----GENKALLPFGSYSSLLEYQYTRLLKL-FKKVYISTKDKKF---E-FN--------------   64 (196)
T ss_pred             CCEEEECCCCCCCC-----CCCCCCCEECCCCHHHHHHHHHHHHH-CCEEEEECCCHHH---H-CC--------------
T ss_conf             40899737872239-----99862527699555999999998863-6768996481366---4-59--------------


Q ss_pred             CEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf             00001134411248579984333423346654211011223333111278644454433221122212234322001124
Q gi|254780365|r   87 KAELTLLAESIPSIGNAVFTWQYERKGLGHAVWCARNIIGDNPFALLLPDMIMSPLEGENCMANMIKLYEKEGANILAVS  166 (299)
Q Consensus        87 ~~~~~~~~~~~~~~~~i~~v~Q~~p~Gtg~Ai~~a~~~i~de~flv~~gD~i~~~~~~~~~l~~li~~~~~~~~~vi~~~  166 (299)
T Consensus        65 ~~-------------~i-~d~~~~~~GPL~Gi~saL~~~~~~~~~v~~cD~Pfl~~---~~i~~L~~---~~~~~~v~~~  124 (196)
T PRK00560         65 AP-------------FL-LEKESDLFSPLFGIHNAFLTLQTPEIFFISVDTPFVSF---ESIKKLCG---KENFSVTYAK  124 (196)
T ss_pred             CC-------------EE-ECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCH---HHHHHHHH---CCCCCEEEEE
T ss_conf             98-------------88-65788988809999999985777868999578888899---99999972---2699989995


Q ss_pred             ECCHHHCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCEEECHHHEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             32854433133100133333353000000257788867342330202002723311000122666767500378999998
Q gi|254780365|r  167 ECDPQLSCKYGMVQVGKAIDHQVFHISDMIEKPDSSTFISNFFINGRYILHPDIFSILNDWKENEGKGEIQLTDSMRKLS  246 (299)
Q Consensus       167 ~v~~~~~~~yGvi~~~~~~~~~~~~I~~~vEKP~~~~~~Snl~~~GiYi~~~~i~~~L~~~~~~~~~gE~~ltD~i~~l~  246 (299)
T Consensus       125 -------------------------~---~~~~~-P-------L~aly--~~~~l~~l~~~l~---~g~~~l----~~~l  159 (196)
T PRK00560        125 -------------------------S---PTKEH-Y-------LISLW--HRSLLNALNYALK---TQNYRL----SDLV  159 (196)
T ss_pred             -------------------------E---CCCCC-C-------EEEEE--CHHHHHHHHHHHH---CCCCHH----HHHH
T ss_conf             -------------------------4---89013-0-------46785--2889999999998---299519----9999


Q ss_pred             HCCCEEEEEEE--EEEEECCCHHHHHHHHH
Q ss_conf             31984899981--37864399889999999
Q gi|254780365|r  247 ERHDFLAYHFK--GHTYDCGSKKGFVLANI  274 (299)
Q Consensus       247 ~~~~v~a~~~~--g~w~DiG~~~~yl~A~~  274 (299)
T Consensus       160 ~~~~~~~v~~~~~~~F~NiNTpeD~~~A~~  189 (196)
T PRK00560        160 KNSSSQAVHFEDEEEFLNLNTLKDYELALQ  189 (196)
T ss_pred             HHCCCEEEECCCCCCCCCCCCHHHHHHHHH
T ss_conf             878968974599874246899999999999