HHsearch alignment for GI: 254780365 and conserved domain: TIGR00454

Probab=99.39  E-value=2.4e-13  Score=102.01  Aligned_cols=126  Identities=17%  Similarity=0.276  Sum_probs=78.4

Q ss_pred             EEEEECCCCCCCCCHHHCCCCCCEEEECCEEHHHHHHHHHHHC-CCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHCCCC
Q ss_conf             8999568888334324408883335688362799999999978-998899981355444101001174544456541870
Q gi|254780365|r    9 KAVFPIAGLGMRFFPISKVIPKEMLAIVDRPVIQYVIEEALEA-GLTDFVFVTGRGKGLIKDYFDIQFELEQSLRKRNKK   87 (299)
Q Consensus         9 KavIlAaG~GtRl~P~T~~~pKpllpi~~kpiI~~~i~~l~~~-Gi~~i~iv~~~~k~~I~~~f~~~~~~~~~l~~~~~~   87 (299)
T Consensus         2 ~aL~MaGGkGTRlg---~d~EKPL~evcGr~lIDhvl~~l~~~~GV~~ii~~TSPhTP~Te~y~----------~~~~~~   68 (204)
T TIGR00454         2 LALVMAGGKGTRLG---RDVEKPLLEVCGRKLIDHVLEALKKAKGVDNIIVVTSPHTPKTEEYV----------AEKYKE   68 (204)
T ss_pred             CCEEECCCCCCCCC---CCCCCCHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHH----------HHCCCE
T ss_conf             50240588731226---55565337565850457777866404787537998377797637887----------305850


Q ss_pred             EEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             0001134411248579984333423346654211011223333111278644454433221122212234322
Q gi|254780365|r   88 AELTLLAESIPSIGNAVFTWQYERKGLGHAVWCARNIIGDNPFALLLPDMIMSPLEGENCMANMIKLYEKEGA  160 (299)
Q Consensus        88 ~~~~~~~~~~~~~~~i~~v~Q~~p~Gtg~Ai~~a~~~i~de~flv~~gD~i~~~~~~~~~l~~li~~~~~~~~  160 (299)
T Consensus        69 ~~~ivvidasGk----GYiED-----l~E~~~hlE~~~-~EP~lV~ssDl~~~r~~---~id~Ivd~y~~~~~  128 (204)
T TIGR00454        69 YKRIVVIDASGK----GYIED-----LREVLSHLELAF-SEPLLVVSSDLVLVRDK---IIDSIVDAYYKIKK  128 (204)
T ss_pred             EEEEEEEECCCC----CCHHH-----HHHHHHHHHHHH-CCCEEEEECCHHHHHHH---HHHHHHHHHHCCCC
T ss_conf             457889976999----60252-----789999877663-39857874360243367---78777643210488