HHsearch alignment for GI: 254780365 and conserved domain: TIGR02092
>TIGR02092 glgD glucose-1-phosphate adenylyltransferase, GlgD subunit; InterPro: IPR011832 This family is GlgD, an apparent regulatory protein that appears in an alpha2/beta2 heterotetramer with GlgC (glucose-1-phosphate adenylyltransferase, IPR011831 from INTERPRO) in a subset of bacteria that use GlgC for glycogen biosynthesis.; GO: 0005978 glycogen biosynthetic process.
Probab=99.56 E-value=1e-14 Score=110.46 Aligned_cols=247 Identities=18% Similarity=0.243 Sum_probs=165.1
Q ss_pred EEEEECCCCCCCCCHHHCCCCCCEEEECCE-EHHHHHHHHHHHCCCCEEEEECCCCCC-CCHHHCCCCHHHHHHHHHCCC
Q ss_conf 899956888833432440888333568836-279999999997899889998135544-410100117454445654187
Q gi|254780365|r 9 KAVFPIAGLGMRFFPISKVIPKEMLAIVDR-PVIQYVIEEALEAGLTDFVFVTGRGKG-LIKDYFDIQFELEQSLRKRNK 86 (299)
Q Consensus 9 KavIlAaG~GtRl~P~T~~~pKpllpi~~k-piI~~~i~~l~~~Gi~~i~iv~~~~k~-~I~~~f~~~~~~~~~l~~~~~ 86 (299)
T Consensus 4 ~aIi~l~~~~~~l~~LT~~Rp~A~~PfgGrYRlIDF~LSn~~NAgI~~v~~~~~~~~~~Sl~DHLg~G~e----WdL~r~ 79 (383)
T TIGR02092 4 SAIINLTESKKNLSPLTKVRPVASLPFGGRYRLIDFPLSNMVNAGIRNVAVFFKNKERRSLFDHLGSGRE----WDLNRK 79 (383)
T ss_pred EEEEECCCCCHHCCCHHHHCCCEEECCCCEEEEEECCHHCCCCCCEEEEEEECCCCCCCHHHHHCCCCCC----CCCCCC
T ss_conf 8997357882011314550870332358647788301002310360022465266665315221348688----361102
Q ss_pred CEEECCCCCCCCCCCEEEEC--CCCC-CCCCCC--CCCCC-----CCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00001134411248579984--3334-233466--54211-----01122---333311127864445443322112221
Q gi|254780365|r 87 KAELTLLAESIPSIGNAVFT--WQYE-RKGLGH--AVWCA-----RNIIG---DNPFALLLPDMIMSPLEGENCMANMIK 153 (299)
Q Consensus 87 ~~~~~~~~~~~~~~~~i~~v--~Q~~-p~Gtg~--Ai~~a-----~~~i~---de~flv~~gD~i~~~~~~~~~l~~li~ 153 (299)
T Consensus 80 ~~gl------------F~~pP~~~~~~~~~~~~kaall~~~~~~~l~fl~rS~~~y~V~~~s~~v~NiD-----l~~~l~ 142 (383)
T TIGR02092 80 RDGL------------FLFPPKYNDRDDVSEGGKAALLKRYFSNNLEFLKRSTSEYVVVLNSHMVCNID-----LKAVLK 142 (383)
T ss_pred CCCE------------EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECC-----HHHHHH
T ss_conf 5752------------77068768643234563377889999887678750899718985474578302-----899999
Q ss_pred CCCCCCCCEEEEE-ECCHHHCCC-C-CCEECCCCCCCCCCEEEEEC----CCCCCCCCCCCEEECHHHEECHHH-HHHHC
Q ss_conf 2234322001124-328544331-3-31001333333530000002----577888673423302020027233-11000
Q gi|254780365|r 154 LYEKEGANILAVS-ECDPQLSCK-Y-GMVQVGKAIDHQVFHISDMI----EKPDSSTFISNFFINGRYILHPDI-FSILN 225 (299)
Q Consensus 154 ~~~~~~~~vi~~~-~v~~~~~~~-y-Gvi~~~~~~~~~~~~I~~~v----EKP~~~~~~Snl~~~GiYi~~~~i-~~~L~ 225 (299)
T Consensus 143 ~H~~~~~~iT~VYKkv~~~~~~~~~c~~L~~De~g-----~v~s~~Pms~~~~~~~~e~~n~-Sl~~yi~~t~lLiell~ 216 (383)
T TIGR02092 143 RHEETGKDITVVYKKVKKADLSEEDCTILKFDEKG-----EVKSIGPMSVAKNLNKEEEENL-SLDIYILSTELLIELLY 216 (383)
T ss_pred HHHHCCCCEEEEECCCCCCCCCCCCCCEEEECCCC-----CEEEEECEEEECCCCCHHHHHH-HHHHEEECHHHHHHHHH
T ss_conf 98744896689973478467762357278863678-----5688632000026761344432-01002426689999999
Q ss_pred CCCCCCCCCCC-CHHHHHHHHHHCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 12266676750-037899999831984899981378643998899999999863183466999
Q gi|254780365|r 226 DWKENEGKGEI-QLTDSMRKLSERHDFLAYHFKGHTYDCGSKKGFVLANIAFALARQDIRSDI 287 (299)
Q Consensus 226 ~~~~~~~~gE~-~ltD~i~~l~~~~~v~a~~~~g~w~DiG~~~~yl~A~~~~al~~~~~~~~~ 287 (299)
T Consensus 217 ~~~~---~g~~~~l~~~~~~~l~~~~~~aYEY~GYl~~I~s~~sYY~aNM~l-L~-~~~f~~L 274 (383)
T TIGR02092 217 ECIQ---KGKKTSLEELIRENLKELNINAYEYKGYLANINSVKSYYKANMDL-LE-PKIFQSL 274 (383)
T ss_pred HHHH---CCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHHHHH-HH-HHHHHHH
T ss_conf 8763---155679999999999864754330342211110167898872886-31-6876887