HHsearch alignment for GI: 254780365 and conserved domain: TIGR03202
>TIGR03202 pucB xanthine dehydrogenase accessory protein pucB. In Bacillus subtilis the expression of this protein, located in an operon with the structural subunits of xanthine dehydrogenase, has been found to be essential for XDH activity. Some members of this family appear to have a distant relationship to the MobA protein involved in molybdopterin biosynthesis, although this may be coincidental.
Probab=99.48 E-value=1.1e-13 Score=104.03 Aligned_cols=182 Identities=18% Similarity=0.252 Sum_probs=113.3
Q ss_pred EEEEECCCCCCCCCHHHCCCCCCEEEECCEEHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHCCCCE
Q ss_conf 89995688883343244088833356883627999999999789988999813554441010011745444565418700
Q gi|254780365|r 9 KAVFPIAGLGMRFFPISKVIPKEMLAIVDRPVIQYVIEEALEAGLTDFVFVTGRGKGLIKDYFDIQFELEQSLRKRNKKA 88 (299)
Q Consensus 9 KavIlAaG~GtRl~P~T~~~pKpllpi~~kpiI~~~i~~l~~~Gi~~i~iv~~~~k~~I~~~f~~~~~~~~~l~~~~~~~ 88 (299)
T Consensus 2 ~aiILAAG~S~RmG-----~~KlLl~~~g~~ll~~~~~~~~~~~~~~vvVV~g~~~~~~~~----------~~~~~---- 62 (190)
T TIGR03202 2 VAIYLAAGQSRRMG-----ENKLALPLGETTLGSASLKTALSSRLSKVIVVIGEKYAHLSW----------LDPYL---- 62 (190)
T ss_pred EEEEECCCCCCCCC-----CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHH----------HHHHH----
T ss_conf 79997998766899-----884238509911999999999866998199981871888876----------67876----
Q ss_pred EECCCCCCCCCCCEEEECC-CCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 0011344112485799843-3342334665421101122---33331112786444544332211222122343220011
Q gi|254780365|r 89 ELTLLAESIPSIGNAVFTW-QYERKGLGHAVWCARNIIG---DNPFALLLPDMIMSPLEGENCMANMIKLYEKEGANILA 164 (299)
Q Consensus 89 ~~~~~~~~~~~~~~i~~v~-Q~~p~Gtg~Ai~~a~~~i~---de~flv~~gD~i~~~~~~~~~l~~li~~~~~~~~~vi~ 164 (299)
T Consensus 63 ---------~~~~~~~~v~n~~~~~G~~sSi~~Gl~~~~~~~~d~~li~l~D~P~l---~~~~i~~L~~~~~~~~~~iv~ 130 (190)
T TIGR03202 63 ---------LADERIMLVCCRDACEGQAHSLKCGLRKAEAMGADAVVILLADQPFL---TADVINALLALAKRRPDDYVA 130 (190)
T ss_pred ---------HCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCC---CHHHHHHHHHHHHHCCCCEEE
T ss_conf ---------33487499968986546079999999974366889699964897788---999999999999858990899
Q ss_pred EEECCHHHCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCEEECHHHEECHHHHHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf 24328544331331001333333530000002577888673423302020027233110001226667675003789999
Q gi|254780365|r 165 VSECDPQLSCKYGMVQVGKAIDHQVFHISDMIEKPDSSTFISNFFINGRYILHPDIFSILNDWKENEGKGEIQLTDSMRK 244 (299)
Q Consensus 165 ~~~v~~~~~~~yGvi~~~~~~~~~~~~I~~~vEKP~~~~~~Snl~~~GiYi~~~~i~~~L~~~~~~~~~gE~~ltD~i~~ 244 (299)
T Consensus 131 ~---------~~~-------------------g~~G~Pv-----------lf~~~~f~~L~~l~GD~--G-------ar~ 162 (190)
T TIGR03202 131 A---------SFK-------------------GKPRPPI-----------LFSKSLFPKLKALKGDE--G-------ARA 162 (190)
T ss_pred E---------EEC-------------------CCCCCCE-----------EECHHHHHHHHHCCCCH--H-------HHH
T ss_conf 8---------628-------------------9636988-----------97799999988378874--5-------999
Q ss_pred HHHCC-CEEEEEE--EEEEEECCCHHHH
Q ss_conf 98319-8489998--1378643998899
Q gi|254780365|r 245 LSERH-DFLAYHF--KGHTYDCGSKKGF 269 (299)
Q Consensus 245 l~~~~-~v~a~~~--~g~w~DiG~~~~y 269 (299)
T Consensus 163 ll~~~~~~~~~~~~d~~~~~DIDTpeDy 190 (190)
T TIGR03202 163 LLRKDKSGLALPVADASAFFDIDTKEDY 190 (190)
T ss_pred HHHCCCCCEEEEECCCCCCCCCCCHHHC
T ss_conf 9841776569983898916079884549