HHsearch alignment for GI: 254780365 and conserved domain: TIGR03202

>TIGR03202 pucB xanthine dehydrogenase accessory protein pucB. In Bacillus subtilis the expression of this protein, located in an operon with the structural subunits of xanthine dehydrogenase, has been found to be essential for XDH activity. Some members of this family appear to have a distant relationship to the MobA protein involved in molybdopterin biosynthesis, although this may be coincidental.
Probab=99.48  E-value=1.1e-13  Score=104.03  Aligned_cols=182  Identities=18%  Similarity=0.252  Sum_probs=113.3

Q ss_pred             EEEEECCCCCCCCCHHHCCCCCCEEEECCEEHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHCCCCE
Q ss_conf             89995688883343244088833356883627999999999789988999813554441010011745444565418700
Q gi|254780365|r    9 KAVFPIAGLGMRFFPISKVIPKEMLAIVDRPVIQYVIEEALEAGLTDFVFVTGRGKGLIKDYFDIQFELEQSLRKRNKKA   88 (299)
Q Consensus         9 KavIlAaG~GtRl~P~T~~~pKpllpi~~kpiI~~~i~~l~~~Gi~~i~iv~~~~k~~I~~~f~~~~~~~~~l~~~~~~~   88 (299)
T Consensus         2 ~aiILAAG~S~RmG-----~~KlLl~~~g~~ll~~~~~~~~~~~~~~vvVV~g~~~~~~~~----------~~~~~----   62 (190)
T TIGR03202         2 VAIYLAAGQSRRMG-----ENKLALPLGETTLGSASLKTALSSRLSKVIVVIGEKYAHLSW----------LDPYL----   62 (190)
T ss_pred             EEEEECCCCCCCCC-----CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHH----------HHHHH----
T ss_conf             79997998766899-----884238509911999999999866998199981871888876----------67876----


Q ss_pred             EECCCCCCCCCCCEEEECC-CCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf             0011344112485799843-3342334665421101122---33331112786444544332211222122343220011
Q gi|254780365|r   89 ELTLLAESIPSIGNAVFTW-QYERKGLGHAVWCARNIIG---DNPFALLLPDMIMSPLEGENCMANMIKLYEKEGANILA  164 (299)
Q Consensus        89 ~~~~~~~~~~~~~~i~~v~-Q~~p~Gtg~Ai~~a~~~i~---de~flv~~gD~i~~~~~~~~~l~~li~~~~~~~~~vi~  164 (299)
T Consensus        63 ---------~~~~~~~~v~n~~~~~G~~sSi~~Gl~~~~~~~~d~~li~l~D~P~l---~~~~i~~L~~~~~~~~~~iv~  130 (190)
T TIGR03202        63 ---------LADERIMLVCCRDACEGQAHSLKCGLRKAEAMGADAVVILLADQPFL---TADVINALLALAKRRPDDYVA  130 (190)
T ss_pred             ---------HCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCC---CHHHHHHHHHHHHHCCCCEEE
T ss_conf             ---------33487499968986546079999999974366889699964897788---999999999999858990899


Q ss_pred             EEECCHHHCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCEEECHHHEECHHHHHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf             24328544331331001333333530000002577888673423302020027233110001226667675003789999
Q gi|254780365|r  165 VSECDPQLSCKYGMVQVGKAIDHQVFHISDMIEKPDSSTFISNFFINGRYILHPDIFSILNDWKENEGKGEIQLTDSMRK  244 (299)
Q Consensus       165 ~~~v~~~~~~~yGvi~~~~~~~~~~~~I~~~vEKP~~~~~~Snl~~~GiYi~~~~i~~~L~~~~~~~~~gE~~ltD~i~~  244 (299)
T Consensus       131 ~---------~~~-------------------g~~G~Pv-----------lf~~~~f~~L~~l~GD~--G-------ar~  162 (190)
T TIGR03202       131 A---------SFK-------------------GKPRPPI-----------LFSKSLFPKLKALKGDE--G-------ARA  162 (190)
T ss_pred             E---------EEC-------------------CCCCCCE-----------EECHHHHHHHHHCCCCH--H-------HHH
T ss_conf             8---------628-------------------9636988-----------97799999988378874--5-------999


Q ss_pred             HHHCC-CEEEEEE--EEEEEECCCHHHH
Q ss_conf             98319-8489998--1378643998899
Q gi|254780365|r  245 LSERH-DFLAYHF--KGHTYDCGSKKGF  269 (299)
Q Consensus       245 l~~~~-~v~a~~~--~g~w~DiG~~~~y  269 (299)
T Consensus       163 ll~~~~~~~~~~~~d~~~~~DIDTpeDy  190 (190)
T TIGR03202       163 LLRKDKSGLALPVADASAFFDIDTKEDY  190 (190)
T ss_pred             HHHCCCCCEEEEECCCCCCCCCCCHHHC
T ss_conf             9841776569983898916079884549