HHsearch alignment for GI: 254780365 and conserved domain: cd04193

>cd04193 UDPGlcNAc_PPase UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc. UDP-N-acetylglucosamine (UDPGlcNAc) pyrophosphorylase (UAP) (also named GlcNAc1P uridyltransferase), catalyzes the reversible conversion of UTP and GlcNAc1 to PPi and UDPGlcNAc. UDP-N-acetylglucosamine (UDPGlcNAc), the activated form of GlcNAc, is a key precursor of N- and O-linked glycosylations. It is essential for the synthesis of chitin (a major component of the fungal cell wall) and of the glycosylphosphatidylinositol (GPI) linker which anchors a variety of cell surface proteins to the plasma membrane. In bacteria, UDPGlcNAc represents an essential precursor for both peptidoglycan and lipopolysaccharide biosynthesis. Human UAP has two isoforms, resulting from alternative splicing of a single gene and differing by the presence or absence of 17 amino acids. UDPGlcNAc pyrophosphorylase shares significant sequence and structure conservation with UDPglucose pyrophosphorylase.
Probab=97.76  E-value=4e-05  Score=51.44  Aligned_cols=192  Identities=17%  Similarity=0.179  Sum_probs=90.4

Q ss_pred             EEEEECCCCCCCCCHHHCCCCCCEEEEC---CEEHHHHHHHHHHH----CC------CC-EEEEECCC-CCCCCHHHCCC
Q ss_conf             8999568888334324408883335688---36279999999997----89------98-89998135-54441010011
Q gi|254780365|r    9 KAVFPIAGLGMRFFPISKVIPKEMLAIV---DRPVIQYVIEEALE----AG------LT-DFVFVTGR-GKGLIKDYFDI   73 (299)
Q Consensus         9 KavIlAaG~GtRl~P~T~~~pKpllpi~---~kpiI~~~i~~l~~----~G------i~-~i~iv~~~-~k~~I~~~f~~   73 (299)
T Consensus        17 avv~laGG~GTrlG---~~~pKg~~~i~~~~~~sl~~l~~e~i~~l~~~~~~~~~~~~~ip~~iMtS~~T~~~T~~~l~~   93 (323)
T cd04193          17 AVLLLAGGQGTRLG---FDGPKGMFPVGLPSKKSLFQLQAERILKLQELAGEASGKKVPIPWYIMTSEATHEETRKFFKE   93 (323)
T ss_pred             EEEEECCCCCCCCC---CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHH
T ss_conf             99995788745568---999716257268899809999999999999998774388885169997885345899999986


Q ss_pred             CH--HHHHHHHHCCCCEEECCC-CC---CCCCCCEEE----ECCCCCCCCCCCCCCCC------CCCC--CCCCCCCCCC
Q ss_conf             74--544456541870000113-44---112485799----84333423346654211------0112--2333311127
Q gi|254780365|r   74 QF--ELEQSLRKRNKKAELTLL-AE---SIPSIGNAV----FTWQYERKGLGHAVWCA------RNII--GDNPFALLLP  135 (299)
Q Consensus        74 ~~--~~~~~l~~~~~~~~~~~~-~~---~~~~~~~i~----~v~Q~~p~Gtg~Ai~~a------~~~i--~de~flv~~g  135 (299)
T Consensus        94 ~~~fGl~~--------~~i~~f~Q~~~P~~~~~g~~~l~~~~~~~~~P~GhG~i~~aL~~sG~l~~l~~~Gi~yi~v~~v  165 (323)
T cd04193          94 NNYFGLDP--------EQVHFFQQGMLPCVDFDGKILLEEKGKIAMAPNGNGGLYKALQTAGILEDMKKRGIKYIHVYSV  165 (323)
T ss_pred             CCCCCCCH--------HHEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCEEEEEEEC
T ss_conf             76468885--------5647871687314868987156899751427999717999999878488999669889999965


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCEE--EEEECCHHHCCCCCCEECCCCCCCCCCEEEEECCCCCCC-C---CCC---
Q ss_conf             8644454433221122212234322001--124328544331331001333333530000002577888-6---734---
Q gi|254780365|r  136 DMIMSPLEGENCMANMIKLYEKEGANIL--AVSECDPQLSCKYGMVQVGKAIDHQVFHISDMIEKPDSS-T---FIS---  206 (299)
Q Consensus       136 D~i~~~~~~~~~l~~li~~~~~~~~~vi--~~~~v~~~~~~~yGvi~~~~~~~~~~~~I~~~vEKP~~~-~---~~S---  206 (299)
T Consensus       166 DN~L~~~~Dp----~~lG~~~~~~~~~~~kvv~K~~~~--ekvG~l~~~----~gk~~vvEYsel~~~~~~~~~~~g~l~  235 (323)
T cd04193         166 DNILVKVADP----VFIGFCISKGADVGAKVVRKRYPT--EKVGVVVLV----DGKPQVVEYSEISDELAEKRDADGELQ  235 (323)
T ss_pred             CCCCCCCCCH----HHHHHHHHCCCCEEEEEEECCCCC--CCEEEEEEE----CCEEEEEEECCCCHHHHHHHCCCCCEE
T ss_conf             7443232488----999999874996378998888899--831089998----990699984258988984018766165


Q ss_pred             -CEEECHHHEECHHHH
Q ss_conf             -233020200272331
Q gi|254780365|r  207 -NFFINGRYILHPDIF  221 (299)
Q Consensus       207 -nl~~~GiYi~~~~i~  221 (299)
T Consensus       236 f~~gNi~~~~fsl~fl  251 (323)
T cd04193         236 YNAGNIANHFFSLDFL  251 (323)
T ss_pred             ECCCCHHHHHEEHHHH
T ss_conf             1455677753139999