HHsearch alignment for GI: 254780365 and conserved domain: cd06422

>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=100.00  E-value=0  Score=367.43  Aligned_cols=219  Identities=19%  Similarity=0.263  Sum_probs=184.7

Q ss_pred             EEEEECCCCCCCCCHHHCCCCCCEEEECCEEHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHCCCCE
Q ss_conf             89995688883343244088833356883627999999999789988999813554441010011745444565418700
Q gi|254780365|r    9 KAVFPIAGLGMRFFPISKVIPKEMLAIVDRPVIQYVIEEALEAGLTDFVFVTGRGKGLIKDYFDIQFELEQSLRKRNKKA   88 (299)
Q Consensus         9 KavIlAaG~GtRl~P~T~~~pKpllpi~~kpiI~~~i~~l~~~Gi~~i~iv~~~~k~~I~~~f~~~~~~~~~l~~~~~~~   88 (299)
T Consensus         1 KAvIlAgG~GtRl~plT~~~PKpllpv~~kpii~~~i~~l~~~gi~~iii~~~y~~~~i~~~~~~~--------------   66 (221)
T cd06422           1 KAMILAAGLGTRMRPLTDTRPKPLVPVAGKPLIDHALDRLAAAGIRRIVVNTHHLADQIEAHLGDS--------------   66 (221)
T ss_pred             CEEEECCCCCCCCCHHHCCCCHHEEEECCEEHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCC--------------
T ss_conf             989988847668874457998023799998999999999998299679983253278899987225--------------


Q ss_pred             EECCCCCCCCCCCEEEECCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CEEEEE
Q ss_conf             00113441124857998433-3423346654211011223333111278644454433221122212234322-001124
Q gi|254780365|r   89 ELTLLAESIPSIGNAVFTWQ-YERKGLGHAVWCARNIIGDNPFALLLPDMIMSPLEGENCMANMIKLYEKEGA-NILAVS  166 (299)
Q Consensus        89 ~~~~~~~~~~~~~~i~~v~Q-~~p~Gtg~Ai~~a~~~i~de~flv~~gD~i~~~~~~~~~l~~li~~~~~~~~-~vi~~~  166 (299)
T Consensus        67 ---------~~~~~i~~~~e~~~~lGT~~ai~~a~~~~~~d~flv~~gD~l~~~~-----~~~~~~~~~~~~~~~~~~~~  132 (221)
T cd06422          67 ---------RFGLRITISDEPDELLETGGGIKKALPLLGDEPFLVVNGDILWDGD-----LAPLLLLHAWRMDALLLLLP  132 (221)
T ss_pred             ---------CCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCEEECCC-----HHHHHHHHHHHCCCCEEEEE
T ss_conf             ---------5787379974033236650588888863499868998067578189-----89999999970689779999


Q ss_pred             ECCHHHCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCEEECHHHEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             32854433133100133333353000000257788867342330202002723311000122666767500378999998
Q gi|254780365|r  167 ECDPQLSCKYGMVQVGKAIDHQVFHISDMIEKPDSSTFISNFFINGRYILHPDIFSILNDWKENEGKGEIQLTDSMRKLS  246 (299)
Q Consensus       167 ~v~~~~~~~yGvi~~~~~~~~~~~~I~~~vEKP~~~~~~Snl~~~GiYi~~~~i~~~L~~~~~~~~~gE~~ltD~i~~l~  246 (299)
T Consensus       133 ~~~~~~~~~~g~~~~~~~~-----~i~---~~~~~--~~~~~~~~G~yif~~~if~~i~-------~~~~~~~d~~~~li  195 (221)
T cd06422         133 LVRNPGHNGVGDFSLDADG-----RLR---RGGGG--AVAPFTFTGIQILSPELFAGIP-------PGKFSLNPLWDRAI  195 (221)
T ss_pred             EECCCCCCCCCEEEECCCE-----EEE---ECCCC--CCCEEEEEEEEEEEHHHHHHCC-------CCCCCHHHHHHHHH
T ss_conf             8678765575379876865-----899---77888--7742788779998189995478-------88775589999999


Q ss_pred             HCCCEEEEEEEEEEEECCCHHHHHHH
Q ss_conf             31984899981378643998899999
Q gi|254780365|r  247 ERHDFLAYHFKGHTYDCGSKKGFVLA  272 (299)
Q Consensus       247 ~~~~v~a~~~~g~w~DiG~~~~yl~A  272 (299)
T Consensus       196 ~~~~v~~~~~~g~w~DiGtpe~~~~A  221 (221)
T cd06422         196 AAGRLFGLVYDGLWFDVGTPERLLAA  221 (221)
T ss_pred             HCCCEEEEECCCEEEECCCHHHHHHC
T ss_conf             66984999729979949999999749