HHsearch alignment for GI: 254780365 and conserved domain: cd06422
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=100.00 E-value=0 Score=367.43 Aligned_cols=219 Identities=19% Similarity=0.263 Sum_probs=184.7
Q ss_pred EEEEECCCCCCCCCHHHCCCCCCEEEECCEEHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHCCCCE
Q ss_conf 89995688883343244088833356883627999999999789988999813554441010011745444565418700
Q gi|254780365|r 9 KAVFPIAGLGMRFFPISKVIPKEMLAIVDRPVIQYVIEEALEAGLTDFVFVTGRGKGLIKDYFDIQFELEQSLRKRNKKA 88 (299)
Q Consensus 9 KavIlAaG~GtRl~P~T~~~pKpllpi~~kpiI~~~i~~l~~~Gi~~i~iv~~~~k~~I~~~f~~~~~~~~~l~~~~~~~ 88 (299)
T Consensus 1 KAvIlAgG~GtRl~plT~~~PKpllpv~~kpii~~~i~~l~~~gi~~iii~~~y~~~~i~~~~~~~-------------- 66 (221)
T cd06422 1 KAMILAAGLGTRMRPLTDTRPKPLVPVAGKPLIDHALDRLAAAGIRRIVVNTHHLADQIEAHLGDS-------------- 66 (221)
T ss_pred CEEEECCCCCCCCCHHHCCCCHHEEEECCEEHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCC--------------
T ss_conf 989988847668874457998023799998999999999998299679983253278899987225--------------
Q ss_pred EECCCCCCCCCCCEEEECCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CEEEEE
Q ss_conf 00113441124857998433-3423346654211011223333111278644454433221122212234322-001124
Q gi|254780365|r 89 ELTLLAESIPSIGNAVFTWQ-YERKGLGHAVWCARNIIGDNPFALLLPDMIMSPLEGENCMANMIKLYEKEGA-NILAVS 166 (299)
Q Consensus 89 ~~~~~~~~~~~~~~i~~v~Q-~~p~Gtg~Ai~~a~~~i~de~flv~~gD~i~~~~~~~~~l~~li~~~~~~~~-~vi~~~ 166 (299)
T Consensus 67 ---------~~~~~i~~~~e~~~~lGT~~ai~~a~~~~~~d~flv~~gD~l~~~~-----~~~~~~~~~~~~~~~~~~~~ 132 (221)
T cd06422 67 ---------RFGLRITISDEPDELLETGGGIKKALPLLGDEPFLVVNGDILWDGD-----LAPLLLLHAWRMDALLLLLP 132 (221)
T ss_pred ---------CCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEECCEEECCC-----HHHHHHHHHHHCCCCEEEEE
T ss_conf ---------5787379974033236650588888863499868998067578189-----89999999970689779999
Q ss_pred ECCHHHCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCEEECHHHEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 32854433133100133333353000000257788867342330202002723311000122666767500378999998
Q gi|254780365|r 167 ECDPQLSCKYGMVQVGKAIDHQVFHISDMIEKPDSSTFISNFFINGRYILHPDIFSILNDWKENEGKGEIQLTDSMRKLS 246 (299)
Q Consensus 167 ~v~~~~~~~yGvi~~~~~~~~~~~~I~~~vEKP~~~~~~Snl~~~GiYi~~~~i~~~L~~~~~~~~~gE~~ltD~i~~l~ 246 (299)
T Consensus 133 ~~~~~~~~~~g~~~~~~~~-----~i~---~~~~~--~~~~~~~~G~yif~~~if~~i~-------~~~~~~~d~~~~li 195 (221)
T cd06422 133 LVRNPGHNGVGDFSLDADG-----RLR---RGGGG--AVAPFTFTGIQILSPELFAGIP-------PGKFSLNPLWDRAI 195 (221)
T ss_pred EECCCCCCCCCEEEECCCE-----EEE---ECCCC--CCCEEEEEEEEEEEHHHHHHCC-------CCCCCHHHHHHHHH
T ss_conf 8678765575379876865-----899---77888--7742788779998189995478-------88775589999999
Q ss_pred HCCCEEEEEEEEEEEECCCHHHHHHH
Q ss_conf 31984899981378643998899999
Q gi|254780365|r 247 ERHDFLAYHFKGHTYDCGSKKGFVLA 272 (299)
Q Consensus 247 ~~~~v~a~~~~g~w~DiG~~~~yl~A 272 (299)
T Consensus 196 ~~~~v~~~~~~g~w~DiGtpe~~~~A 221 (221)
T cd06422 196 AAGRLFGLVYDGLWFDVGTPERLLAA 221 (221)
T ss_pred HCCCEEEEECCCEEEECCCHHHHHHC
T ss_conf 66984999729979949999999749