HHsearch alignment for GI: 254780365 and conserved domain: cd06426
>cd06426 NTP_transferase_like_2 NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=100.00 E-value=0 Score=342.12 Aligned_cols=218 Identities=21% Similarity=0.364 Sum_probs=184.6
Q ss_pred EEEECCCCCCCCCHHHCCCCCCEEEECCEEHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHCCCCEE
Q ss_conf 99956888833432440888333568836279999999997899889998135544410100117454445654187000
Q gi|254780365|r 10 AVFPIAGLGMRFFPISKVIPKEMLAIVDRPVIQYVIEEALEAGLTDFVFVTGRGKGLIKDYFDIQFELEQSLRKRNKKAE 89 (299)
Q Consensus 10 avIlAaG~GtRl~P~T~~~pKpllpi~~kpiI~~~i~~l~~~Gi~~i~iv~~~~k~~I~~~f~~~~~~~~~l~~~~~~~~ 89 (299)
T Consensus 1 viILAaG~GtRl~plT~~~PK~Ll~i~gkpli~~~i~~l~~~gi~~i~i~~~y~~e~i~~~~~~~--------------- 65 (220)
T cd06426 1 VVIMAGGKGTRLRPLTENTPKPMLKVGGKPILETIIDRFIAQGFRNFYISVNYLAEMIEDYFGDG--------------- 65 (220)
T ss_pred CEEECCCCCCCCCHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCC---------------
T ss_conf 98937757557884446998103299995399999999998399689995014611323343156---------------
Q ss_pred ECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE-EEEEEC
Q ss_conf 0113441124857998433342334665421101122333311127864445443322112221223432200-112432
Q gi|254780365|r 90 LTLLAESIPSIGNAVFTWQYERKGLGHAVWCARNIIGDNPFALLLPDMIMSPLEGENCMANMIKLYEKEGANI-LAVSEC 168 (299)
Q Consensus 90 ~~~~~~~~~~~~~i~~v~Q~~p~Gtg~Ai~~a~~~i~de~flv~~gD~i~~~~~~~~~l~~li~~~~~~~~~v-i~~~~v 168 (299)
T Consensus 66 -------~~~~~~i~~i~e~~~lGt~gal~~~~~~~-~~~~iv~~gD~i~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 132 (220)
T cd06426 66 -------SKFGVNISYVREDKPLGTAGALSLLPEKP-TDPFLVMNGDILTNLN-----YEHLLDFHKENNADATVCVREY 132 (220)
T ss_pred -------CCCCCEEEEEECCCCCCHHHHHHHHHHCC-CCCEEEECCCEECCCC-----HHHHHHHHHHCCCCEEEEEEEC
T ss_conf -------65784388721466555789998667618-9978997777304759-----9999999997499669999862
Q ss_pred CHHHCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCEEECHHHEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 85443313310013333335300000025778886734233020200272331100012266676750037899999831
Q gi|254780365|r 169 DPQLSCKYGMVQVGKAIDHQVFHISDMIEKPDSSTFISNFFINGRYILHPDIFSILNDWKENEGKGEIQLTDSMRKLSER 248 (299)
Q Consensus 169 ~~~~~~~yGvi~~~~~~~~~~~~I~~~vEKP~~~~~~Snl~~~GiYi~~~~i~~~L~~~~~~~~~gE~~ltD~i~~l~~~ 248 (299)
T Consensus 133 ~--~~~~~gv~~~~~------~~v~~~~ekp~~----~~~~~~Giy~~~~~~~~~i~~------~~~~~~~d~~~~li~~ 194 (220)
T cd06426 133 E--VQVPYGVVETEG------GRITSIEEKPTH----SFLVNAGIYVLEPEVLDLIPK------NEFFDMPDLIEKLIKE 194 (220)
T ss_pred C--CCCCCCEEEECC------CCEEEEEECCCC----CCCCCEEEEEECHHHHHHCCC------CCCCCCCHHHHHHHHC
T ss_conf 5--687776599348------837677766888----652331699989999974689------9944545899999987
Q ss_pred C-CEEEEEEEEEEEECCCHHHHHHHH
Q ss_conf 9-848999813786439988999999
Q gi|254780365|r 249 H-DFLAYHFKGHTYDCGSKKGFVLAN 273 (299)
Q Consensus 249 ~-~v~a~~~~g~w~DiG~~~~yl~A~ 273 (299)
T Consensus 195 g~~v~~~~~~~~W~DiGt~e~l~~AN 220 (220)
T cd06426 195 GKKVGVFPIHEYWLDIGRPEDYEKAN 220 (220)
T ss_pred CCCEEEEEECCEEEECCCHHHHHHHC
T ss_conf 99889997499999698989999749