HHsearch alignment for GI: 254780365 and conserved domain: pfam02348
>pfam02348 CTP_transf_3 Cytidylyltransferase. This family consists of two main Cytidylyltransferase activities: 1) 3-deoxy-manno-octulosonate cytidylyltransferase,, EC:2.7.7.38 catalysing the reaction:- CTP + 3-deoxy-D-manno-octulosonate <= diphosphate + CMP-3-deoxy-D-manno-octulosonate, 2) acylneuraminate cytidylyltransferase EC:2.7.7.43,, catalysing the reaction:- CTP + N-acylneuraminate <= diphosphate + CMP-N-acylneuraminate. NeuAc cytydilyltransferase of Mannheimia haemolytica has been characterized describing kinetics and regulation by substrate charge, energetic charge and amino-sugar demand.
Probab=98.72 E-value=3.1e-08 Score=70.62 Aligned_cols=182 Identities=16% Similarity=0.128 Sum_probs=98.2
Q ss_pred EEEECCCCCCCCCHHHCCCCCCEEEECCEEHHHHHHHHHHHCC-CCEEEEECCCCCCCCHHHCCCCHHHHHHHHHCCCCE
Q ss_conf 9995688883343244088833356883627999999999789-988999813554441010011745444565418700
Q gi|254780365|r 10 AVFPIAGLGMRFFPISKVIPKEMLAIVDRPVIQYVIEEALEAG-LTDFVFVTGRGKGLIKDYFDIQFELEQSLRKRNKKA 88 (299)
Q Consensus 10 avIlAaG~GtRl~P~T~~~pKpllpi~~kpiI~~~i~~l~~~G-i~~i~iv~~~~k~~I~~~f~~~~~~~~~l~~~~~~~ 88 (299)
T Consensus 2 ~iIpAR~~S~Rlp------~K~L~~i~gkpmI~~v~~~a~~s~~~~~viVaTd~--~~I~~~~----------------- 56 (197)
T pfam02348 2 AIIPARSGSKRLP------GKNLLKLGGKPLIARVIEAALQSKLFDKVVVATDS--EEIADIA----------------- 56 (197)
T ss_pred EEECCCCCCCCCC------CCCCHHHCCCCHHHHHHHHHHHCCCCCEEEEECCC--CEEEEEC-----------------
T ss_conf 8984588887899------96203529906899999999975898728995483--0144201-----------------
Q ss_pred EECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-EE-EE
Q ss_conf 0011344112485799843334233466542110112233-331112786444544332211222122343220-01-12
Q gi|254780365|r 89 ELTLLAESIPSIGNAVFTWQYERKGLGHAVWCARNIIGDN-PFALLLPDMIMSPLEGENCMANMIKLYEKEGAN-IL-AV 165 (299)
Q Consensus 89 ~~~~~~~~~~~~~~i~~v~Q~~p~Gtg~Ai~~a~~~i~de-~flv~~gD~i~~~~~~~~~l~~li~~~~~~~~~-vi-~~ 165 (299)
T Consensus 57 -----~---~~~~~~i~t~~~~~~gt~R~~ea~~~~~~~~d~ivnvqgD~Pli~p---~~i~~~i~~~~~~~~~~~~t~~ 125 (197)
T pfam02348 57 -----E---KFGGGVVVRRGSLASGTDRFIEAVKAFLADEEIIVNLQGDEPLLQP---TSILRAIEHLREAGEDYVSTLV 125 (197)
T ss_pred -----C---CCCCCEEEEEECCCCCCCHHHHHHHHHCCHHEEEEECCCCEEECCH---HHHHHHHHHHHHCCCCCEEEEE
T ss_conf -----2---3233135764023565211999998643410099965896687588---9999999999858987289820
Q ss_pred EEC-CHHHCCCCCCEECCCCCCCCCCEEEEECCCCCCCC--C---CC-CEEECHHHEECHHHHHHHCCCCCC
Q ss_conf 432-85443313310013333335300000025778886--7---34-233020200272331100012266
Q gi|254780365|r 166 SEC-DPQLSCKYGMVQVGKAIDHQVFHISDMIEKPDSST--F---IS-NFFINGRYILHPDIFSILNDWKEN 230 (299)
Q Consensus 166 ~~v-~~~~~~~yGvi~~~~~~~~~~~~I~~~vEKP~~~~--~---~S-nl~~~GiYi~~~~i~~~L~~~~~~ 230 (299)
T Consensus 126 ~~~~~~~~~~~~n~vKvv~---~~~~~alyfsR~~iP~~~~~~~~~~~~~~h~gIY~f~~~~L~~f~~l~~s 194 (197)
T pfam02348 126 KPVVSSEEILNPNPLKVVL---DDAGYALYFSRSPIPYIRDHPAPLQLYLRHKGIYAFRKEHLIRYVIDTPS 194 (197)
T ss_pred EECCCHHHHCCCCCCEEEE---CCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHCCCCC
T ss_conf 4737888933998749998---88998824137889743123255787548999989889999998768999