PSIBLAST alignment of GI: 254780365 and protein with PDB id: 1iim
>gi|14277974|pdb|1IIM|A Chain A, Thymidylyltransferase Complexed With Ttp Length = 292
>gi|14277975|pdb|1IIM|B Chain B, Thymidylyltransferase Complexed With Ttp Length = 292
>gi|14277976|pdb|1IIN|A Chain A, Thymidylyltransferase Complexed With Udp-Glucose Length = 292
>gi|14277977|pdb|1IIN|B Chain B, Thymidylyltransferase Complexed With Udp-Glucose Length = 292
>gi|14277978|pdb|1IIN|C Chain C, Thymidylyltransferase Complexed With Udp-Glucose Length = 292
>gi|14277979|pdb|1IIN|D Chain D, Thymidylyltransferase Complexed With Udp-Glucose Length = 292
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 52/300 (17%), Positives = 102/300 (34%), Gaps = 41/300 (13%)
Query: 5 KKVRKAVFPIAGLGMRFFPISKVIPKEMLAIVDRPVIQYVIEEALEAGLTDFVFVTGRGK 64
K RK + G G R +P++ + +++L I D+P+I Y + + AG+ D + ++
Sbjct: 1 MKTRKGIILAGGSGTRLYPVTMAVSQQLLPIYDKPMIYYPLSTLMLAGIRDILIISTPQ- 59
Query: 65 GLIKDYFDIQFELEQSLRKRNKKAELTLLAESIPSIGNAVFTWQYERKGLGHAVWCARNI 124
+ LL + N + Q GL A
Sbjct: 60 --------------------DTPRFQQLLGDGSQWGLNLQYKVQPSPDGLAQAFIIGEEF 99
Query: 125 IGDNPFALLLPDMIMSPLEGENCMANMIKLYEKEGANILAVSECDPQLSCKYGMVQVGKA 184
IG + AL+L D I + M + + +
Sbjct: 100 IGHDDCALVLGDNIFYGHDLPKLMEAAVNKESG---ATVFAYHVNDPERYGVVEFDQ--- 153
Query: 185 IDHQVFHISDMIEKPDSSTFISNFFINGRYILHPDIFSILNDWKENEGKGEIQLTDSMRK 244
+ + + SN+ + G Y + + + K + +GE+++TD R
Sbjct: 154 ------KGTAVSLEEKPLQPKSNYAVTGLYFYDNSVVEMAKNLKPS-ARGELEITDINRI 206
Query: 245 LSERHDFLAYHF-KGH-TYDCGSKKGFVLAN--IAFALARQDIR---SDIETDLKTLVSA 297
E+ +G+ D G+ + + A+ IA RQ ++ + K ++A
Sbjct: 207 YMEQGRLSVAMMGRGYAWLDTGTHQSLIEASNFIATIEERQGLKVSCPEEIAFRKNFINA 266