HHsearch alignment for GI: 254780367 and conserved domain: TIGR00766

>TIGR00766 TIGR00766 ribonuclease, putative; InterPro: IPR005274 Members of this family show similarity to ribonuclease BN and include the Escherichia coli protein YhjD is located in the inner membrane . The function of these proteins are unknown. .
Probab=99.71  E-value=1.2e-13  Score=82.58  Aligned_cols=260  Identities=13%  Similarity=0.110  Sum_probs=182.6

Q ss_pred             HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH----H--HHHCC-C--HHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf             9999999985578768899999999999999999999----9--86317-5--678999999999733741368999999
Q gi|254780367|r   12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGAN----L--AGFLG-A--HQFVPTVIDVVFGAWPEVIAKPITDEI   82 (281)
Q Consensus        12 i~~~~~~~~~~~~~~~Aaalaf~~llsl~Plli~~~~----i--~~~~~-~--~~~~~~~~~~i~~~lp~~~~~~i~~~l   82 (281)
T Consensus         3 ~~~~~~~~~d~~g~~~~~~~~~~~~~~~~p~~~~~~~~gg~~gg~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (299)
T TIGR00766         3 LVRAGDRFNDRLGNLFGAGLTYFSFLSLIPLLLVGFGAGGFVGGLALHPRLNPPELLGLLEERVRSDVDPALGRTLKNTV   82 (299)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf             21000122112002566788999999999999875201200000334320350467888888764101226789999887


Q ss_pred             HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH----H----HHHCCCCCC-CHHHHHHHHH-HHHHHHHHHHHHHHHH
Q ss_conf             9852045741499999999999999999999999----8----630236663-0367679999-9999999999999999
Q gi|254780367|r   83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISL----N----RAYRVVEMR-SWYITRLISF-GYVLLASVTLVIMSFV  152 (281)
Q Consensus        83 ~~~~~~~~~~~~~i~~~~~l~~as~~~~~l~~~~----~----~i~~~~~~r-~~~~~~~~~~-~~~~~~~~~~~~~~~~  152 (281)
T Consensus        83 ~~~~~-~~~~~g~~g~~~~~~~g~~w~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  161 (299)
T TIGR00766        83 NTAVD-ARTTVGLVGLAVALYSGLGWLGNLREALRAQSSAQSRDVWERPPAPEEKLWLKYLWDFLSLGGLLLALVVTLAL  161 (299)
T ss_pred             HHHHH-HCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             66664-11112478899998762011456788875443233444430355403577889999999998899999999998


Q ss_pred             HHHHH---HHHHHHHHHCCC-----CCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCHHHHHHHHH
Q ss_conf             99999---999999741465-----2107----999999999999999999999998405----7776752101221899
Q gi|254780367|r  153 FVAIP---LALAYVRKFFPA-----LGNL----LLIIWNGRIYATMLALFIGLIFVHLFL----PAAKSKIMSILPGVIF  216 (281)
Q Consensus       153 ~~~~~---~~~~~~~~~~~~-----~~~~----~~~~~~~~~~~~~l~~~~~~~~~y~~~----P~~~~~~~~~~~Ga~~  216 (281)
T Consensus       162 ~~~~~~~p~~~~~~~~~~~~~g~~w~~~~~~w~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  241 (299)
T TIGR00766       162 TSLGGARPSAQALIWLALPLNGIDWLRPSVEWLKPTWDLIGLGISVLASLLLLWWLFWWLIGRLPREPPGGKPLLRGGLL  241 (299)
T ss_pred             HHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf             86512332578888876145522566666776305789999999999999999999998863112221001355654577


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999999999999986522246789999999999999999999999999999999
Q gi|254780367|r  217 TWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI  273 (281)
Q Consensus       217 a~v~~~~~~~~f~~y~~~~~~~~~~YGsl~~ii~lllWly~~~~ill~Ga~~na~l~  273 (281)
T Consensus       242 ~~~g~~~~~~~~~~~~~~~~~-~p~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~  297 (299)
T TIGR00766       242 AAVGFELLKFVGTVYLPELLK-SPSGAAFGPVLGLLAFFYFFAWLDLFLTAWAATAD  297 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             787689999999988888750-54421356789999999998889999988754115