HHSEARCH alignment of GI: 254780367 and SCOP domain: d2r6gf1

Alignment

Probab=91.33  E-value=0.23  Score=21.70  Aligned_cols=57  Identities=18%  Similarity=0.194  Sum_probs=42.7

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf             99999999999999984057776752101221899999999999999999986522246
Q gi|254780367|r  182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST  240 (281)
Q Consensus       182 ~~~~~l~~~~~~~~~y~~~P~~~~~~~~~~~Ga~~a~v~~~~~~~~f~~y~~~~~~~~~  240 (281)
                      |....+...+.....|-+..++..++|+..||-++- +.+.+.-.+++.|++ +.||+.
T Consensus        28 ~~~a~~~~~~~~~~~~vy~s~r~~p~kyi~PG~~~l-~~Fvi~Pi~yT~~ia-FTNy~t   84 (248)
T d2r6gf1          28 YLFAITTLILSSAGLYIFANRKAYAWRYVYPGMAGM-GLFVLFPLVCTIAIA-FTNYSS   84 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHH-HHHTHHHHHHHHHGG-GBCCSS
T ss_pred             HHHHHHHHHHHHHEEEEEECCCCCCEEHHHHHHHHH-HHHHHHHHEEEEEEE-EEECCC
T ss_conf             999999999988527999726764110122389999-999997540588898-898478

SCOP domain information

class: Multi-domain proteins (alpha and beta)
fold: MalF N-terminal region-like
superfamily: MalF N-terminal region-like
family: MalF N-terminal region-like
domain: Maltose transport system permease protein MalF
species: Escherichia coli [TaxId: 562]