HHsearch alignment for GI: 254780368 and conserved domain: pfam00582
>pfam00582 Usp Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.
Probab=90.98 E-value=0.44 Score=27.15 Aligned_cols=97 Identities=16% Similarity=0.210 Sum_probs=55.6
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHH------------HH----HHHH--------HHCCCCCEEEECCC
Q ss_conf 260136899999999855998528999971410158------------88----8878--------50777623763365
Q gi|254780368|r 35 MNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEE------------VL----KNSL--------AMGADRGILIESNE 90 (249)
Q Consensus 35 in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~------------~L----r~al--------AmGaD~ai~i~d~~ 90 (249)
T Consensus 11 ~s~~s~~al~~A~~~a~~-~~~~l~llhv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 87 (140)
T pfam00582 11 GSEESERALEWALELAKR-RGAELILLHVIDPEPSGAASEALEEEEEEELEEEEAEAEALAEAAAEAGGVVVEVVVR--G 87 (140)
T ss_pred CCHHHHHHHHHHHHHHHH-CCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE--E
T ss_conf 999999999999999986-4997999999628875544433303579999999999999999986357986799999--6
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC----EEHHHHHHHHHCCC
Q ss_conf 4788999999999861268649999611358886----12899999985796
Q gi|254780368|r 91 TLEPLSIAKILREIVKKENPIIVIAGKQTTDNES----NQTGQMLAALMRWP 138 (249)
Q Consensus 91 ~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~----g~v~~~lA~~Lg~p 138 (249)
T Consensus 88 g-~---~~~~I~~~~~~~~~dliV~G~~~~~~~~~~~~Gs~s~~v~~~~~~p 135 (140)
T pfam00582 88 G-D---PAEAILEVAEEEDADLIVMGSRGRSGLRRLLLGSVAEKVLRHAPCP 135 (140)
T ss_pred E-C---HHHHHCEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCC
T ss_conf 0-7---0364210000567888999289998644650173999999548998