Query gi|254780368|ref|YP_003064781.1| electron transfer flavoprotein beta subunit [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 249
No_of_seqs 134 out of 1509
Neff 6.2
Searched_HMMs 33803
Date Wed Jun 1 12:40:29 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780368.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >1efv_B Electron transfer flav 100.0 0 0 329.0 26.0 219 1-219 4-226 (226)
2 >1efp_B ETF, protein (electron 100.0 0 0 327.4 25.4 219 1-219 1-223 (223)
3 >1o97_C Electron transferring 100.0 2.9E-42 0 291.6 20.7 211 1-211 1-217 (228)
4 >3fet_A Electron transfer flav 99.9 1.4E-26 4.1E-31 190.7 7.2 158 32-206 6-164 (166)
5 >1o97_D Electron transferring 99.9 7E-25 2.1E-29 179.8 14.5 178 26-219 5-187 (188)
6 >1efv_A Electron transfer flav 99.9 2E-23 6.1E-28 170.4 13.6 172 29-218 9-182 (183)
7 >1efp_A ETF, protein (electron 99.9 1.3E-21 3.9E-26 158.7 8.2 166 28-203 6-173 (179)
8 >3ih5_A Electron transfer flav 99.6 6.3E-16 1.9E-20 122.2 8.4 118 26-148 8-127 (177)
9 >3dlo_A Universal stress prote 94.6 0.063 1.9E-06 32.2 4.8 99 36-139 35-151 (155)
10 >2z08_A Universal stress prote 93.8 0.35 1E-05 27.4 7.4 105 32-140 8-134 (137)
11 >1mjh_A Protein (ATP-binding d 93.6 0.25 7.3E-06 28.4 6.2 104 33-140 12-155 (162)
12 >3fg9_A Protein of universal s 93.3 0.54 1.6E-05 26.2 7.6 97 36-136 14-133 (143)
13 >2pfs_A USP, universal stress 91.8 0.94 2.8E-05 24.6 7.3 100 34-140 14-143 (150)
14 >2dum_A Hypothetical protein P 91.7 0.98 2.9E-05 24.5 9.6 103 33-140 12-152 (170)
15 >1q77_A Hypothetical protein A 90.9 1.1 3.4E-05 24.1 7.0 84 32-122 10-122 (138)
16 >3fdx_A Putative filament prot 90.2 1.4 4E-05 23.6 7.8 97 38-138 15-138 (143)
17 >2gm3_A Unknown protein; AT3G0 90.1 1.2 3.6E-05 23.9 6.5 106 32-140 20-159 (175)
18 >1jmv_A USPA, universal stress 88.7 1.7 5E-05 23.0 6.4 98 34-138 10-132 (141)
19 >1mio_B Nitrogenase molybdenum 88.3 1.8 5.5E-05 22.8 7.1 86 39-142 12-100 (109)
20 >1uan_A Hypothetical protein T 87.4 2.1 6.2E-05 22.4 6.8 94 47-140 23-130 (227)
21 >1iow_A DD-ligase, DDLB, D-ALA 85.3 2 5.8E-05 22.6 5.2 74 59-142 5-86 (100)
22 >2ixd_A LMBE-related protein; 84.5 2.9 8.6E-05 21.5 7.5 92 47-138 25-130 (242)
23 >3cis_A Uncharacterized protei 82.8 1.4 4E-05 23.6 3.5 33 32-65 25-57 (309)
24 >1m1n_B Nitrogenase molybdenum 80.1 2.8 8.2E-05 21.6 4.3 102 30-141 56-160 (215)
25 >1tq8_A Hypothetical protein R 80.0 4.2 0.00013 20.4 7.5 81 32-117 23-127 (128)
26 >3loq_A Universal stress prote 79.8 4.3 0.00013 20.4 6.1 99 32-134 28-148 (294)
27 >1qgu_B Protein (nitrogenase m 79.2 3.8 0.00011 20.7 4.7 103 29-141 80-185 (240)
28 >2gek_A Phosphatidylinositol m 78.7 4.7 0.00014 20.2 6.8 108 32-148 31-142 (237)
29 >1f0k_A MURG, UDP-N-acetylgluc 78.6 4.7 0.00014 20.2 6.6 102 35-146 16-129 (196)
30 >1v4v_A UDP-N-acetylglucosamin 76.5 5.4 0.00016 19.8 6.9 85 52-140 30-119 (204)
31 >3gwa_A 3-oxoacyl-(acyl-carrie 76.2 2.7 8.1E-05 21.7 3.3 52 98-149 50-106 (168)
32 >1u11_A PURE (N5-carboxyaminoi 75.4 5.8 0.00017 19.6 6.2 105 36-147 2-110 (182)
33 >2jjm_A Glycosyl transferase, 71.3 7.2 0.00021 19.0 5.7 87 35-135 26-121 (216)
34 >1to6_A Glycerate kinase; glyc 70.9 7.3 0.00022 18.9 6.6 59 91-149 45-111 (160)
35 >2r60_A Glycosyl transferase, 66.9 8.9 0.00026 18.4 6.6 131 1-147 8-154 (290)
36 >1q74_A 1D-MYO-inosityl 2-acet 65.5 9.4 0.00028 18.2 5.8 64 68-131 69-154 (303)
37 >1ofd_A Ferredoxin-dependent g 64.5 9.8 0.00029 18.1 5.3 32 57-89 245-276 (441)
38 >3fiu_A NH(3)-dependent NAD(+) 63.8 10 0.0003 18.0 4.3 74 68-143 16-89 (249)
39 >3cwc_A Putative glycerate kin 63.7 10 0.0003 18.0 7.6 76 92-179 17-117 (150)
40 >1a9x_A Carbamoyl phosphate sy 63.4 4.3 0.00013 20.4 2.0 80 36-136 54-133 (140)
41 >1y5e_A Molybdenum cofactor bi 59.2 12 0.00036 17.5 8.5 79 56-138 14-101 (169)
42 >2vbf_A Branched-chain alpha-k 56.9 10 0.0003 18.0 3.0 52 93-145 13-64 (163)
43 >2nrt_A Uvrabc system protein 56.6 13 0.0004 17.2 6.5 60 81-145 55-119 (156)
44 >1ozh_A ALS, acetolactate synt 56.6 13 0.0004 17.2 4.1 52 93-145 7-58 (180)
45 >2vbi_A Pyruvate decarboxylase 56.2 14 0.0004 17.2 4.4 46 100-145 18-63 (165)
46 >2yzk_A OPRT, oprtase, orotate 55.9 14 0.00041 17.1 4.3 49 93-145 16-66 (154)
47 >3c48_A Predicted glycosyltran 55.8 14 0.00041 17.1 6.1 104 35-148 41-157 (250)
48 >3il3_A 3-oxoacyl-[acyl-carrie 55.6 14 0.00041 17.1 5.5 76 40-115 26-109 (289)
49 >3d0r_A Protein CALG3; caliche 55.6 14 0.00041 17.1 4.6 42 98-145 119-160 (237)
50 >1u6e_A 3-oxoacyl-[acyl-carrie 54.4 15 0.00043 17.0 5.8 34 107-140 80-113 (180)
51 >1gte_A Dihydropyrimidine dehy 54.3 15 0.00043 17.0 5.7 42 40-82 167-209 (280)
52 >1vgv_A UDP-N-acetylglucosamin 53.8 15 0.00044 16.9 8.8 85 52-140 25-114 (213)
53 >2pan_A Glyoxylate carboligase 53.2 14 0.00041 17.1 3.2 51 93-144 8-58 (220)
54 >1ovm_A Indole-3-pyruvate deca 52.9 11 0.00034 17.7 2.8 45 101-145 22-66 (169)
55 >2c31_A Oxalyl-COA decarboxyla 52.3 11 0.00033 17.7 2.6 52 93-145 6-57 (179)
56 >1n7k_A Deoxyribose-phosphate 52.2 15 0.00045 16.9 3.3 15 72-86 94-108 (234)
57 >3dzc_A UDP-N-acetylglucosamin 51.3 16 0.00048 16.7 8.1 85 52-140 50-139 (211)
58 >2q28_A Oxalyl-COA decarboxyla 50.1 12 0.00034 17.6 2.4 46 100-145 12-57 (177)
59 >3c3w_A Two component transcri 48.9 10 0.0003 18.0 2.0 46 35-82 55-100 (129)
60 >2nrr_A Uvrabc system protein 48.7 18 0.00053 16.4 5.6 97 26-145 11-114 (159)
61 >2csu_A 457AA long hypothetica 48.5 18 0.00053 16.4 3.6 57 54-110 63-122 (126)
62 >2vk8_A Pyruvate decarboxylase 47.9 17 0.00051 16.5 3.0 46 100-145 18-63 (165)
63 >2uz1_A Benzaldehyde lyase; th 47.0 14 0.00041 17.1 2.4 54 92-146 8-61 (186)
64 >2nxw_A Phenyl-3-pyruvate deca 46.9 18 0.00053 16.4 3.0 40 105-144 21-60 (163)
65 >2f82_A HMG-COA synthase; HMGS 46.8 19 0.00057 16.2 4.9 78 40-117 54-144 (414)
66 >3eul_A Possible nitrate/nitri 46.3 20 0.00058 16.2 7.4 68 35-108 69-136 (152)
67 >3cf4_G Acetyl-COA decarbonyla 46.2 18 0.00054 16.3 2.9 45 101-145 27-71 (170)
68 >1hg3_A Triosephosphate isomer 46.2 20 0.00058 16.2 3.9 109 32-145 14-126 (225)
69 >3idf_A USP-like protein; univ 45.9 20 0.00059 16.1 5.9 98 35-138 10-133 (138)
70 >2iht_A Carboxyethylarginine s 44.4 21 0.00062 16.0 3.5 48 98-145 20-67 (170)
71 >2ywx_A Phosphoribosylaminoimi 43.1 22 0.00065 15.9 4.5 83 58-149 1-87 (157)
72 >3jzd_A Iron-containing alcoho 42.2 23 0.00067 15.8 9.0 132 40-179 21-158 (161)
73 >1xpm_A 3-hydroxy-3-methylglut 41.3 23 0.00069 15.7 4.7 27 111-137 72-98 (396)
74 >1nvm_A HOA, 4-hydroxy-2-oxova 41.2 23 0.00069 15.7 8.7 102 39-141 119-224 (273)
75 >1ta9_A Glycerol dehydrogenase 41.1 23 0.00069 15.7 4.0 104 39-147 75-180 (219)
76 >2qsj_A DNA-binding response r 39.5 25 0.00073 15.5 5.7 67 35-107 58-124 (154)
77 >3dpi_A NAD+ synthetase; ssgci 38.8 25 0.00075 15.4 6.4 74 69-142 12-91 (147)
78 >3cz5_A Two-component response 38.6 26 0.00076 15.4 6.2 50 35-87 59-108 (153)
79 >2jae_A L-amino acid oxidase; 37.9 26 0.00078 15.3 8.3 75 99-176 24-101 (179)
80 >2p6p_A Glycosyl transferase; 37.8 26 0.00078 15.3 5.1 38 101-144 99-136 (217)
81 >2ji4_A Phosphoribosyl pyropho 37.7 26 0.00078 15.3 8.0 103 5-108 59-186 (203)
82 >1vdm_A Purine phosphoribosylt 37.6 27 0.00078 15.3 5.4 51 95-149 12-62 (153)
83 >1u9y_A RPPK;, ribose-phosphat 37.3 27 0.00079 15.3 3.6 40 99-142 2-42 (128)
84 >1mzj_A Beta-ketoacylsynthase 37.1 27 0.0008 15.3 5.9 31 109-139 81-111 (339)
85 >2h1v_A Ferrochelatase; rossma 36.5 28 0.00082 15.2 4.7 74 36-109 54-137 (168)
86 >3il6_A 3-oxoacyl-[acyl-carrie 35.9 28 0.00084 15.1 5.6 28 111-138 41-68 (138)
87 >2pgn_A Cyclohexane-1,2-dione 35.4 27 0.0008 15.3 2.4 52 93-145 9-60 (190)
88 >1ea0_A Glutamate synthase [NA 35.2 29 0.00086 15.1 5.2 34 55-89 214-247 (412)
89 >2pjk_A 178AA long hypothetica 35.1 29 0.00086 15.1 8.3 81 56-138 16-110 (178)
90 >1efp_A ETF, protein (electron 35.0 29 0.00086 15.1 3.2 70 105-179 9-79 (128)
91 >3kuu_A Phosphoribosylaminoimi 34.7 29 0.00087 15.0 7.2 85 55-146 12-100 (174)
92 >1g2q_A Adenine phosphoribosyl 34.4 30 0.00088 15.0 8.5 96 93-194 39-144 (187)
93 >1p2f_A Response regulator; DR 33.9 30 0.0009 14.9 7.2 83 35-123 51-133 (146)
94 >1q8f_A Pyrimidine nucleoside 33.9 23 0.00068 15.7 1.9 107 32-150 94-219 (247)
95 >1ct9_A Asparagine synthetase 33.8 30 0.0009 14.9 5.4 24 98-121 130-153 (354)
96 >1ysl_A HMG-COA synthase; thio 32.9 31 0.00093 14.8 4.6 29 111-139 91-119 (375)
97 >2wvg_A PDC, pyruvate decarbox 32.9 32 0.00093 14.8 4.4 53 93-146 15-67 (177)
98 >1mzh_A Deoxyribose-phosphate 32.8 32 0.00093 14.8 2.6 15 188-202 165-179 (225)
99 >1uuy_A CNX1, molybdopterin bi 32.4 32 0.00095 14.8 5.3 84 57-140 7-102 (167)
100 >3dah_A Ribose-phosphate pyrop 32.0 33 0.00096 14.7 5.7 49 98-150 1-51 (143)
101 >1eep_A Inosine 5'-monophospha 31.5 33 0.00098 14.7 3.8 78 35-116 174-263 (404)
102 >3hno_A Pyrophosphate-dependen 31.4 33 0.00099 14.7 8.9 67 58-124 37-106 (153)
103 >1y0b_A Xanthine phosphoribosy 31.2 34 0.00099 14.7 4.8 86 94-183 38-133 (197)
104 >2ztj_A Homocitrate synthase; 31.1 34 0.001 14.6 10.3 107 33-140 103-218 (277)
105 >1ybh_A Acetolactate synthase, 30.8 34 0.001 14.6 5.4 51 93-146 2-52 (174)
106 >1tdj_A Biosynthetic threonine 30.8 34 0.001 14.6 3.0 40 102-144 13-52 (99)
107 >1q6z_A BFD, BFDC, benzoylform 30.6 34 0.001 14.6 3.1 54 91-145 11-64 (168)
108 >3b2n_A Uncharacterized protei 30.5 34 0.001 14.6 7.2 66 35-106 57-122 (133)
109 >3eya_A Pyruvate dehydrogenase 30.3 35 0.001 14.6 4.5 50 93-145 13-62 (180)
110 >1gu7_A 2,4-dienoyl-COA reduct 30.1 35 0.001 14.5 5.4 44 45-89 35-78 (181)
111 >3hno_A Pyrophosphate-dependen 29.5 36 0.0011 14.5 4.1 92 68-164 93-192 (211)
112 >2v4w_A Hydroxymethylglutaryl- 29.4 36 0.0011 14.5 3.8 23 42-64 58-82 (460)
113 >1tzj_A ACC deaminase, 1-amino 29.4 36 0.0011 14.5 3.6 46 97-144 15-60 (124)
114 >1psw_A ADP-heptose LPS heptos 28.6 37 0.0011 14.4 6.5 89 45-143 20-108 (150)
115 >2wns_A Orotate phosphoribosyl 28.6 37 0.0011 14.4 5.0 50 93-146 6-57 (133)
116 >1a9x_A Carbamoyl phosphate sy 28.1 38 0.0011 14.3 3.1 81 35-136 17-97 (127)
117 >3dfi_A Pseudoaglycone deacety 28.1 38 0.0011 14.3 4.2 46 95-140 131-180 (270)
118 >1kqp_A NAD+ synthase;, NH(3)- 27.8 38 0.0011 14.3 7.1 76 69-144 12-92 (198)
119 >3giw_A Protein of unknown fun 27.6 39 0.0011 14.3 3.2 63 55-117 105-168 (277)
120 >3eh1_A Protein transport prot 27.6 39 0.0011 14.3 3.1 72 40-122 120-203 (245)
121 >2j8z_A Quinone oxidoreductase 27.4 39 0.0012 14.2 4.7 60 45-115 20-79 (131)
122 >1t9b_A Acetolactate synthase, 27.2 39 0.0012 14.2 4.1 89 93-182 17-111 (197)
123 >1efv_A Electron transfer flav 27.0 40 0.0012 14.2 2.9 67 109-180 14-81 (132)
124 >2yxb_A Coenzyme B12-dependent 26.7 40 0.0012 14.2 8.0 16 105-120 65-80 (161)
125 >3eeg_A 2-isopropylmalate synt 26.5 40 0.0012 14.1 7.6 101 39-141 121-228 (325)
126 >3hww_A 2-succinyl-5-enolpyruv 26.4 38 0.0011 14.3 1.9 28 112-141 28-55 (148)
127 >1xng_A NH(3)-dependent NAD(+) 26.4 41 0.0012 14.1 4.9 71 70-141 14-84 (132)
128 >1j0a_A 1-aminocyclopropane-1- 26.2 41 0.0012 14.1 4.4 64 55-119 45-109 (125)
129 >2qr6_A IMP dehydrogenase/GMP 26.0 41 0.0012 14.1 3.3 11 108-118 140-150 (356)
130 >3f6c_A Positive transcription 26.0 41 0.0012 14.1 6.4 67 35-107 54-120 (134)
131 >1a2o_A CHEB methylesterase; b 25.6 42 0.0012 14.0 7.3 70 35-106 57-128 (144)
132 >2zgi_A Putative 4-amino-4-deo 25.6 40 0.0012 14.1 1.9 21 69-89 31-51 (59)
133 >3jyn_A Quinone oxidoreductase 25.3 43 0.0013 14.0 4.0 60 45-115 20-79 (132)
134 >2pbq_A Molybdenum cofactor bi 24.7 44 0.0013 13.9 9.2 79 57-139 7-98 (178)
135 >3ffs_A Inosine-5-monophosphat 24.6 44 0.0013 13.9 3.1 74 39-117 169-254 (400)
136 >1m1n_A Nitrogenase molybdenum 24.2 44 0.0013 13.9 6.2 86 47-142 96-197 (248)
137 >2eih_A Alcohol dehydrogenase; 24.2 45 0.0013 13.9 4.7 62 43-115 32-93 (145)
138 >2is8_A Molybdopterin biosynth 24.0 45 0.0013 13.8 8.2 79 57-139 3-92 (164)
139 >1e3j_A NADP(H)-dependent keto 23.9 45 0.0013 13.8 7.1 73 35-115 32-104 (173)
140 >3kyj_B CHEY6 protein, putativ 23.8 25 0.00073 15.5 0.6 79 54-139 10-90 (145)
141 >1o97_D Electron transferring 23.8 42 0.0012 14.1 1.7 43 103-145 8-50 (132)
142 >2okg_A Central glycolytic gen 23.2 42 0.0012 14.0 1.7 10 109-118 148-157 (255)
143 >3beo_A UDP-N-acetylglucosamin 22.7 48 0.0014 13.7 10.3 105 39-147 21-130 (211)
144 >1me8_A Inosine-5'-monophospha 22.6 48 0.0014 13.7 3.1 48 38-89 267-314 (503)
145 >1xrs_B D-lysine 5,6-aminomuta 22.6 48 0.0014 13.7 3.4 33 33-65 38-71 (94)
146 >1f76_A Dihydroorotate dehydro 22.3 48 0.0014 13.6 3.4 29 96-124 196-224 (336)
147 >1vrd_A Inosine-5'-monophospha 22.1 49 0.0014 13.6 2.7 51 36-90 259-309 (494)
148 >1zsy_A Mitochondrial 2-enoyl 21.8 49 0.0015 13.6 2.6 41 45-86 34-74 (155)
149 >2cu0_A Inosine-5'-monophospha 21.6 50 0.0015 13.5 2.2 76 38-117 237-321 (471)
150 >1h5q_A NADP-dependent mannito 21.4 50 0.0015 13.5 8.3 78 36-116 21-99 (265)
151 >2pn1_A Carbamoylphosphate syn 21.4 50 0.0015 13.5 6.3 71 35-117 10-80 (104)
152 >2chq_A Replication factor C s 20.5 53 0.0016 13.4 4.2 47 63-109 20-66 (160)
153 >2chg_A Replication factor C s 20.5 53 0.0016 13.4 5.1 48 62-109 19-66 (160)
154 >2gno_A DNA polymerase III, ga 20.4 53 0.0016 13.4 7.9 77 64-140 1-80 (140)
No 1
>>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} (B:1-226)
Probab=100.00 E-value=0 Score=329.00 Aligned_cols=219 Identities=47% Similarity=0.783 Sum_probs=210.4
Q ss_pred CEEEEEEEEECCCCCCEEECCCCCEEEECCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCC
Q ss_conf 96999860303887605980788816324877332601368999999998559985289999714101588888785077
Q gi|254780368|r 1 MKILVPIKGVINYNTKVRIKNDYSGIETENTKISMNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGA 80 (249)
Q Consensus 1 M~I~V~vK~VpD~~~~i~i~~~~~~i~~~~~~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGa 80 (249)
|||+||+|||||+..++++++++..+..+..+..+||+|.++|+.|.+|+++..|.+|+++++|+..+++.+|+++++|+
T Consensus 4 m~i~v~~k~vpd~~~~~~~~~~~ilv~~e~~~~~l~~~~~eal~~A~~la~~~~g~~v~av~~G~~~~~~~~~~~~a~Ga 83 (226)
T 1efv_B 4 LRVLVAVKRVIDYAVKIRVKPDRTGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIAVSCGPAQCQETIRTALAMGA 83 (226)
T ss_dssp CEEEEECCEEECTTSCCCBCTTSSSBCCTTCCEEECHHHHHHHHHHHHHHHTTSCSEEEEEEEESTTHHHHHHHHHHHTC
T ss_pred CEEEEEEEECCCCCCEEEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCC
T ss_conf 78999978776888613892899949727987567841189999999988757993899999793899999999997179
Q ss_pred CCCEEEECCC----CCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEEECCCEEEEE
Q ss_conf 7623763365----478899999999986126864999961135888612899999985796133244334328659999
Q gi|254780368|r 81 DRGILIESNE----TLEPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIKIIDNHAIVT 156 (249)
Q Consensus 81 D~ai~i~d~~----~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~~~~~~~~v~ 156 (249)
|+++++++++ ..|++.+|++|++++++.+||+||||.+|.|+++|+++++||++||||+++++.++++++++++++
T Consensus 84 d~v~~~~~~~~~~~~~d~~~~A~~l~~~i~~~~p~~Il~g~~s~g~~~~~va~~lA~~L~~~~vs~v~~i~~~~g~~~~~ 163 (226)
T 1efv_B 84 DRGIHVEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDKLKVE 163 (226)
T ss_dssp SEEEEEECCHHHHTTCCHHHHHHHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEEEEEETTEEEEE
T ss_pred CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEECCEEEEE
T ss_conf 98999934534666406999999999998744999999945137898585999999984987243589999979999999
Q ss_pred EECCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEECHHHHCCCCCCCEEEEE
Q ss_conf 835896799996398899984355654546988899885216612049890766668457999
Q gi|254780368|r 157 REVGHGTMTMETPLPAVITVDLNLNEPRYISLPNIIKARKKRIEKKKATDFAIDLTPRLKVLR 219 (249)
Q Consensus 157 r~~e~g~e~v~~~lPavisv~~~~n~PR~psl~~im~A~kk~i~~~~~~dlg~d~~~~~~v~~ 219 (249)
|..++|.+.+++++||++|+..+.++||+|+++++|++++++|+.+++++++.+....+++++
T Consensus 164 r~~~~G~~~~~v~~P~vitv~~~~~~pr~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~v~~vS 226 (226)
T 1efv_B 164 REIDGGLETLRLKLPAVVTADLRLNEPRYATLPNIMKAKKKKIEVIKPGDLGVDLTSKLSVIS 226 (226)
T ss_dssp EEETTEEEEEEEESSEEEEECGGGCCCCCCCHHHHHHTTTSCEEEECHHHHTCCCCCSEEEEE
T ss_pred EECCCEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEECHHHCCCCCCCCCEEEE
T ss_conf 984890999997499999998998867889978999747798508689993987789737999
No 2
>>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} (B:1-223)
Probab=100.00 E-value=0 Score=327.41 Aligned_cols=219 Identities=54% Similarity=0.873 Sum_probs=210.4
Q ss_pred CEEEEEEEEECCCCCCEEECCCCCEEEECCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCC
Q ss_conf 96999860303887605980788816324877332601368999999998559985289999714101588888785077
Q gi|254780368|r 1 MKILVPIKGVINYNTKVRIKNDYSGIETENTKISMNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGA 80 (249)
Q Consensus 1 M~I~V~vK~VpD~~~~i~i~~~~~~i~~~~~~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGa 80 (249)
|||+||+|||||++.++++++++..+..+..+..+||+|.++|++|++|+|+..|++|+++++|+..+++.+|+++++|+
T Consensus 1 m~i~v~~k~vpd~~~~~~~~~~~v~v~~e~~~~~l~~~~~eal~~A~~la~~~~g~~v~av~~G~~~~~~~~~~~~a~Ga 80 (223)
T 1efp_B 1 MKVLVPVKRLIDYNVKARVKSDGSGVDLANVKMSMNPFDEIAVEEAIRLKEKGQAEEIIAVSIGVKQAAETLRTALAMGA 80 (223)
T ss_dssp CEEEEECCEEECTTSCCCBCTTSSCBCCTTCCEEECHHHHHHHHHHHHHHTTTSCSEEEEEEEESGGGHHHHHHHHHHTC
T ss_pred CEEEEEEEECCCCCCEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHCCC
T ss_conf 98999988667888644890799858626886567830089999999999857996899999780899999999986289
Q ss_pred CCCEEEECCC----CCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEEECCCEEEEE
Q ss_conf 7623763365----478899999999986126864999961135888612899999985796133244334328659999
Q gi|254780368|r 81 DRGILIESNE----TLEPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIKIIDNHAIVT 156 (249)
Q Consensus 81 D~ai~i~d~~----~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~~~~~~~~v~ 156 (249)
|+.+++.++. ..|++.+|++|++++++.+||+||||.+|.|.++|+++++||++||||+++.+.++++++++++++
T Consensus 81 d~v~~~~~~~~~~~~~d~~~~A~~la~~i~~~~p~~Vl~g~~~~g~d~~~la~~lA~~Lg~~~v~~v~~i~~~~~~~~~~ 160 (223)
T 1efp_B 81 DRAILVVAADDVQQDIEPLAVAKILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASKVEIEGAKAKVT 160 (223)
T ss_dssp SEEEEEECCSSTTCCCCHHHHHHHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEEEEECSSEEEEE
T ss_pred CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCEEEEE
T ss_conf 98999923552336876999999999999861999999844216799885889999980997604179999849989999
Q ss_pred EECCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEECHHHHCCCCCCCEEEEE
Q ss_conf 835896799996398899984355654546988899885216612049890766668457999
Q gi|254780368|r 157 REVGHGTMTMETPLPAVITVDLNLNEPRYISLPNIIKARKKRIEKKKATDFAIDLTPRLKVLR 219 (249)
Q Consensus 157 r~~e~g~e~v~~~lPavisv~~~~n~PR~psl~~im~A~kk~i~~~~~~dlg~d~~~~~~v~~ 219 (249)
|..++|.+.+++++||++|+..+.++||+|+++++|.+++++++.+++++++++..+.+++++
T Consensus 161 r~~~~G~~~~~v~~P~v~tv~~~~~~p~~~~~~~~~~a~~~~v~~~~~~~~~v~~~~~~~vvS 223 (223)
T 1efp_B 161 REVDGGLQTIAVSLPAVVTADLRLNEPRYASLPNIMKAKKKPLDEKTAADYGVDVAPRLEVVS 223 (223)
T ss_dssp EEETTEEEEEEEESSEEEEECTTSCCCCCCCHHHHHHHTTSCEEEEEGGGGTCCCCCSEEEEE
T ss_pred EECCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEEE
T ss_conf 987993999997599999998998867889968998645798627589993978789718999
No 3
>>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} (C:1-228)
Probab=100.00 E-value=2.9e-42 Score=291.56 Aligned_cols=211 Identities=34% Similarity=0.588 Sum_probs=197.7
Q ss_pred CEEEEEEEEECCCCCCEEECCCCCEEEECCCCEECCCHHHHHHHHHHHHHHCCCC-CCEEEEEECCCHHHHHHHHHHHHC
Q ss_conf 9699986030388760598078881632487733260136899999999855998-528999971410158888878507
Q gi|254780368|r 1 MKILVPIKGVINYNTKVRIKNDYSGIETENTKISMNPFDEIALEESLQLREKGIA-TEVIVVSIGSCKVEEVLKNSLAMG 79 (249)
Q Consensus 1 M~I~V~vK~VpD~~~~i~i~~~~~~i~~~~~~~~in~~D~~AlE~Al~lke~~~g-~~V~~lsvG~~~~~~~Lr~alAmG 79 (249)
|||+||+|||||+..++++++++-.+..+..+..+||+|+.+|++|.+|+++.++ .+++++++|+...++.+|.++++|
T Consensus 1 m~i~v~~k~vpd~~~~~~~~~~~ilv~~e~~~~~l~~~~~e~l~~A~~la~~~g~~~~~~~~g~g~~~~~~~~~~~~~~G 80 (228)
T 1o97_C 1 MKILVAVKQTAALEEDFEIREDGMDVDEDFMMYDLNEWDDFSLEEAMKIKESSDTDVEVVVVSVGPDRVDESLRKCLAKG 80 (228)
T ss_dssp CEEEEECCEEEEECTTCCBCTTSSSBCGGGEEEEECHHHHHHHHHHHHHHHHCSSCCEEEEEEESCGGGHHHHHHHHHTT
T ss_pred CEEEEEEEECCCCCCCEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHCC
T ss_conf 97999988667787716985899877546885436964599999999998647995699999925188899999999707
Q ss_pred CCCCEEEECC--CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEEECC--CEEEE
Q ss_conf 7762376336--5478899999999986126864999961135888612899999985796133244334328--65999
Q gi|254780368|r 80 ADRGILIESN--ETLEPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIKIID--NHAIV 155 (249)
Q Consensus 80 aD~ai~i~d~--~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~~~~--~~~~v 155 (249)
+|+.++++++ +..++..++++|++++++.+||+||||.++.|.++|++++++|++||||+++.|++++.++ +++++
T Consensus 81 ad~v~~v~~~~~~~~~~~~~a~~l~~~i~~~~p~~Il~g~t~~g~d~~~la~~lA~~L~~~~~sdv~~i~~~~~~~~~~~ 160 (228)
T 1o97_C 81 ADRAVRVWDDAAEGSDAIVVGRILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVADLQYKPGDNKAVI 160 (228)
T ss_dssp CSEEEEECCGGGTTCCHHHHHHHHHHHHHHHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEEEECCTTCSEEEE
T ss_pred CCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEECCCCEEEE
T ss_conf 97158996156667789999999999998509989999040368998816699999809982567888987079956999
Q ss_pred EEECCCC-EEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEECHHHHCCCC
Q ss_conf 9835896-7999963988999843556545469888998852166120498907666
Q gi|254780368|r 156 TREVGHG-TMTMETPLPAVITVDLNLNEPRYISLPNIIKARKKRIEKKKATDFAIDL 211 (249)
Q Consensus 156 ~r~~e~g-~e~v~~~lPavisv~~~~n~PR~psl~~im~A~kk~i~~~~~~dlg~d~ 211 (249)
+|...+| .+++++++|||+|+..+.++||+|+++++|+++++++++++.++++++.
T Consensus 161 ~r~~~~G~~~~~~~~~P~vitv~~~~~~p~~~~~~~~~~a~~~~i~~~~~~~v~L~~ 217 (228)
T 1o97_C 161 RRELEGGMLQEVEINCPAVLTIQLGINKPRYASLRGIKQAATKPIEEVSLADIGLSA 217 (228)
T ss_dssp EEECGGGCEEEEEEESSCEEEECTTSSCCTTCC----------CCEEECTGGGTCCG
T ss_pred EEEECCCEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEECHHHCCCCH
T ss_conf 999079949999927998999988988766799899998728995895689949898
No 4
>>3fet_A Electron transfer flavoprotein subunit alpha related protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum} (A:)
Probab=99.93 E-value=1.4e-26 Score=190.72 Aligned_cols=158 Identities=13% Similarity=0.079 Sum_probs=142.6
Q ss_pred CEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 73326013689999999985599852899997141015888887850777623763365478899999999986126864
Q gi|254780368|r 32 KISMNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKKENPI 111 (249)
Q Consensus 32 ~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~~D 111 (249)
-+++|+||++|||.+.+.|+ +++++++++|+.. ++++|+|+.++++++.. +...|.++++.++ +||
T Consensus 6 vlV~~e~~~~alE~~~~ak~---~~~~~av~~G~~~-------~~~~Gad~v~~v~~~~~--~~~~a~ala~~~~--~~d 71 (166)
T 3fet_A 6 FLTVSDDXNFLRQVNTLVAG---KGDXDSVIIGEGD-------AKGLGSKVLYRAKKGTP--FDAVSEGILKIAG--NYD 71 (166)
T ss_dssp EEEEESSHHHHHHHHHHHGG---GEEEEEEEESCCC-------CTTCCCSEEEEECTTCC--HHHHHHHHHHHHT--TCS
T ss_pred EEEEECCHHHHHHHHHHHHC---CCCEEEEEECCCH-------HHHCCCEEEEECCCCCH--HHHHHHHHHHHHC--CCC
T ss_conf 99996788899999998632---7966999986706-------55376439999269735--6779999999847--999
Q ss_pred EEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEECCCCEEEEEEC-CCEEEEEECCCCCCCCCCHHH
Q ss_conf 9999611358886128999999857961332443343286599998358967999963-988999843556545469888
Q gi|254780368|r 112 IVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIKIIDNHAIVTREVGHGTMTMETP-LPAVITVDLNLNEPRYISLPN 190 (249)
Q Consensus 112 LIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~~~~~~~~v~r~~e~g~e~v~~~-lPavisv~~~~n~PR~psl~~ 190 (249)
+||||.++.+.+ +++++|++||+|++++|++++.+++.+.++|..++|.+..++. .|+|+|+..+.++||+|++++
T Consensus 72 lVl~g~t~~g~~---la~~lA~~L~~~~vsdv~~i~~~~~~~~~~r~~~gg~~~~~~~~~paVitv~~~~~~~~~~~~~~ 148 (166)
T 3fet_A 72 YIAIGSTEVGRE---IAGYLSFKTGFYTATEIFSLEFNGQKAHTKRFFYGGKTVIEEESDARILTVAPGVIEAKDLGTTP 148 (166)
T ss_dssp EEEEECSHHHHH---HHHHHHHHHCCCEEEEEEEEEESSSSEEEEEEEGGGTEEEEEEECCCEEEECTTSSCCCCCSCCC
T ss_pred EEEECCCCCHHH---HHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEECCCEEEEEEECCCCEEEECCCCCCCCCCCCCC
T ss_conf 999936822667---89999998599754435998747980899988528828999966981999868864667578998
Q ss_pred HHHHHHCCCCEECHHH
Q ss_conf 9988521661204989
Q gi|254780368|r 191 IIKARKKRIEKKKATD 206 (249)
Q Consensus 191 im~A~kk~i~~~~~~d 206 (249)
.+.+.+++++.+++.+
T Consensus 149 ~v~~~~~~i~~~~~~~ 164 (166)
T 3fet_A 149 EIRDLEIGQSRIKITK 164 (166)
T ss_dssp EEEECCCCCCCCEEEE
T ss_pred CEEEECCCCCCCEEEE
T ss_conf 5599624777532676
No 5
>>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} (D:1-188)
Probab=99.93 E-value=7e-25 Score=179.79 Aligned_cols=178 Identities=15% Similarity=0.190 Sum_probs=152.8
Q ss_pred EEECCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCC-CCCHHHHHHHHHHH
Q ss_conf 63248773326013689999999985599852899997141015888887850777623763365-47889999999998
Q gi|254780368|r 26 IETENTKISMNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNE-TLEPLSIAKILREI 104 (249)
Q Consensus 26 i~~~~~~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~-~~D~~~~A~~La~~ 104 (249)
+..+..+..+||+|+++|++|.+|+++ .|++|+++++|+ .+++.+++++++|+|+.+++++.. ..++..++++|+++
T Consensus 5 V~~e~~~~~l~~~s~e~l~~A~~la~~-~g~~v~al~~G~-~~~~~~~~~~~~G~~~v~~~~~~~~~~~~~~~a~al~~~ 82 (188)
T 1o97_D 5 VIAEHRRNDLRPVSLELIGAANGLKKS-GEDKVVVAVIGS-QADAFVPALSVNGVDELVVVKGSSIDFDPDVFEASVSAL 82 (188)
T ss_dssp EECCEETTEECTHHHHHHHHHHHHCSS-TTCEEEEEEEST-TGGGGHHHHCBTTCSEEEEEECSCSSCCHHHHHHHHHHH
T ss_pred EEEEECCCEECHHHHHHHHHHHHHHHC-CCCCEEEEEECC-CHHHHHHHHHHCCCCEEEEECCHHHHCCHHHHHHHHHHH
T ss_conf 999925999889999999999998872-799489999689-709999986553887899956815402547799999999
Q ss_pred HHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEECCCCEE--EEEE--CCCEEEEEECCC
Q ss_conf 612686499996113588861289999998579613324433432865999983589679--9996--398899984355
Q gi|254780368|r 105 VKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIKIIDNHAIVTREVGHGTM--TMET--PLPAVITVDLNL 180 (249)
Q Consensus 105 i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~~~~~~~~v~r~~e~g~e--~v~~--~lPavisv~~~~ 180 (249)
+++.+||+||+|.++.+.+ ++++||.+||+|++++|+.++.++++++++|...+|.. ++++ ++|+|+|+..+.
T Consensus 83 ~~~~~~~lVl~~~t~~g~~---la~rlA~~L~~~~v~dv~~v~~~~~~~~~~r~~~gG~~~~~~~~~~~~p~Vitv~~~~ 159 (188)
T 1o97_D 83 IAAHNPSVVLLPHSVDSLG---YASSLASKTGYGFATDVYIVEYQGDELVATRGGYNQKVNVEVDFPGKSTVVLTIRPSV 159 (188)
T ss_dssp HHHHCCSEEEEECSHHHHT---THHHHHHTSSCEEEEEECEEEEETTEEEEEEEETTTTEEEEEECTTCSCEEEEECTTS
T ss_pred HHHCCCCEEEEECCCCCCC---HHHHHHHHHCCCEECCCEEECCCCCCEEEEEEECCCEEEEEECCCCCCCEEEEECCCC
T ss_conf 9862898899954635566---5889999855770224131013686179998403640689860477773477753643
Q ss_pred CCCCCCCHHHHHHHHHCCCCEECHHHHCCCCCCCEEEEE
Q ss_conf 654546988899885216612049890766668457999
Q gi|254780368|r 181 NEPRYISLPNIIKARKKRIEKKKATDFAIDLTPRLKVLR 219 (249)
Q Consensus 181 n~PR~psl~~im~A~kk~i~~~~~~dlg~d~~~~~~v~~ 219 (249)
++|+.++ .+++++.+++.+ ..+.+++++
T Consensus 160 ~~~~~~~-------~~~~v~~~~~~~----~~~~~~~v~ 187 (188)
T 1o97_D 160 FKPLEGA-------GSPVVSNVDAPS----VQSRSQNKD 187 (188)
T ss_dssp SCCCCSB-------CCCEEEEEECCC----CCCSEEEEE
T ss_pred CCCCCCC-------CCCCEEEECCCC----CCCCCEEEE
T ss_conf 2222224-------897158842676----666635668
No 6
>>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} (A:1-183)
Probab=99.91 E-value=2e-23 Score=170.36 Aligned_cols=172 Identities=15% Similarity=0.056 Sum_probs=148.2
Q ss_pred CCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECC--CCCCHHHHHHHHHHHHH
Q ss_conf 4877332601368999999998559985289999714101588888785077762376336--54788999999999861
Q gi|254780368|r 29 ENTKISMNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESN--ETLEPLSIAKILREIVK 106 (249)
Q Consensus 29 ~~~~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~--~~~D~~~~A~~La~~i~ 106 (249)
+..+..+|++|..+|+.|.+| +++|+++.+|+...+..++.++++|+|+.++++++ ++.++..++++|+++++
T Consensus 9 e~~~~~l~~~s~e~l~~A~~L-----~~~v~av~~G~~~~~~~~~~~~~~Gad~v~~v~~~~~~~~~~~~~a~al~~~i~ 83 (183)
T 1efv_A 9 EHANDSLAPITLNTITAATRL-----GGEVSCLVAGTKCDKVAQDLCKVAGIAKVLVAQHDVYKGLLPEELTPLILATQK 83 (183)
T ss_dssp CEETTEECTHHHHHHHHHHTT-----TSEEEEEEEESCCHHHHHHHHHSTTCCEEEEEECGGGTTCCHHHHHHHHHHHHH
T ss_pred EECCCEECHHHHHHHHHHHHH-----CCCEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCHHCCCCHHHHHHHHHHHHH
T ss_conf 925999988999999999985-----897699998787079999987515987899925830123577899999999987
Q ss_pred CCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCC
Q ss_conf 26864999961135888612899999985796133244334328659999835896799996398899984355654546
Q gi|254780368|r 107 KENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIKIIDNHAIVTREVGHGTMTMETPLPAVITVDLNLNEPRYI 186 (249)
Q Consensus 107 ~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~~~~~~~~v~r~~e~g~e~v~~~lPavisv~~~~n~PR~p 186 (249)
+.+||+||+|.++.+++ +++++|.+||||++|.|++++.+++..+..+......+.+..++|+|+|+..+.++|+++
T Consensus 84 ~~~p~~Vl~~~s~~g~~---la~~lA~~L~~~~vsdv~~~~~~~~~~r~~~~g~~~~~~~~~~~p~vitv~~~~~~p~~~ 160 (183)
T 1efv_A 84 QFNYTHICAGASAFGKN---LLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSFDAAAT 160 (183)
T ss_dssp HHCCSEEEEESSHHHHH---HHHHHHHHHTCCCEEEECEEEETTEEEEEETTTTEEEEEEECCSSEEEEECGGGSCCCCS
T ss_pred HCCCCEEEECCCCCHHH---HHHHHHHHHCCCCCCCEEEECCCCEEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCC
T ss_conf 42998999888711456---758999872776106758960588388777568269987248996699978876446666
Q ss_pred CHHHHHHHHHCCCCEECHHHHCCCCCCCEEEE
Q ss_conf 98889988521661204989076666845799
Q gi|254780368|r 187 SLPNIIKARKKRIEKKKATDFAIDLTPRLKVL 218 (249)
Q Consensus 187 sl~~im~A~kk~i~~~~~~dlg~d~~~~~~v~ 218 (249)
+- ++++++.+++++ ..+.++++
T Consensus 161 ~~------~~~~v~~~~~~~----~~~~~~vv 182 (183)
T 1efv_A 161 SG------GSASSEKASSTS----PVEISEWL 182 (183)
T ss_dssp SS------CCCEEEECCCCC----CCCSEEEE
T ss_pred CC------CCCEEEECCCCC----CCCCEEEE
T ss_conf 78------974057436567----76422555
No 7
>>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} (A:1-179)
Probab=99.85 E-value=1.3e-21 Score=158.73 Aligned_cols=166 Identities=12% Similarity=0.005 Sum_probs=137.6
Q ss_pred ECCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECC--CCCCHHHHHHHHHHHH
Q ss_conf 24877332601368999999998559985289999714101588888785077762376336--5478899999999986
Q gi|254780368|r 28 TENTKISMNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESN--ETLEPLSIAKILREIV 105 (249)
Q Consensus 28 ~~~~~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~--~~~D~~~~A~~La~~i 105 (249)
.+.....+||+|.++|+.|.| .+++|+++++|+...+..++.++++|+|+.++++++ +..++..++++|++.+
T Consensus 6 ~e~~~g~l~~~~~~~L~~a~~-----~~~~v~av~~g~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~a~~l~~~~ 80 (179)
T 1efp_A 6 GEVTNGALNRDATAKAVAAVK-----ALGDVTVLCAGASAKAAAEEAAKIAGVAKVLVAEDALYGHRLAEPTAALIVGLA 80 (179)
T ss_dssp CCBSSSCBCHHHHHHHHHHHG-----GGSCEEEEEEETTCHHHHHHHHTSTTEEEEEEEECGGGTTCCHHHHHHHHHHHH
T ss_pred EEECCCEECHHHHHHHHHHHH-----HHCCEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCHHCCCCHHHHHHHHHHHH
T ss_conf 994499977989999999999-----669808999899945999998764798889995572011355277999999986
Q ss_pred HCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCC
Q ss_conf 12686499996113588861289999998579613324433432865999983589679999639889998435565454
Q gi|254780368|r 106 KKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIKIIDNHAIVTREVGHGTMTMETPLPAVITVDLNLNEPRY 185 (249)
Q Consensus 106 ~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~~~~~~~~v~r~~e~g~e~v~~~lPavisv~~~~n~PR~ 185 (249)
+ +||+||+|.++.+++ +++++|.+||||++++|.+++.+++..+.........+....+.|+|+|+..+.++||.
T Consensus 81 ~--~~~~Vl~~~t~~g~~---la~rlA~~L~~~~vt~v~~v~~~~~~~r~~~~g~~~~~~~~~~~p~vitv~~~~~~~~~ 155 (179)
T 1efp_A 81 G--DYSHIAAPATTDAKN---VMPRVAALLDVMVLSDVSAILDADTFERPIYAGNAIQVVKSKDAKKVFTIRTASFDAAG 155 (179)
T ss_dssp T--TCSEEEEESSHHHHH---HHHHHHHHTTCCEEEEESEECSSSEEEEEEGGGTEEEEEEECSSSEEEEECGGGSCCCC
T ss_pred C--CCCEEEECCCCCCHH---HHHHHHHHHCCCEEEEEEEECCCCEEEEEEEEEEEEEEEEECCCCEEEEECCCCCCCCC
T ss_conf 6--898799858854046---79999998289868205897579829985520038999980799718997677766655
Q ss_pred CCHHHHHHHHHCCCCEEC
Q ss_conf 698889988521661204
Q gi|254780368|r 186 ISLPNIIKARKKRIEKKK 203 (249)
Q Consensus 186 psl~~im~A~kk~i~~~~ 203 (249)
|+.+..+.+.+.++....
T Consensus 156 ~~~~~~~~~~~~~~~~~~ 173 (179)
T 1efp_A 156 EGGTAPVTETAAAADPGL 173 (179)
T ss_dssp SSCCCCCBCCCCCCCCCS
T ss_pred CCCCCCEEEECCCCCCCC
T ss_conf 788763486134468774
No 8
>>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron} (A:1-122,A:163-217)
Probab=99.64 E-value=6.3e-16 Score=122.20 Aligned_cols=118 Identities=16% Similarity=0.216 Sum_probs=104.1
Q ss_pred EEECCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECC--CCCCHHHHHHHHHH
Q ss_conf 6324877332601368999999998559985289999714101588888785077762376336--54788999999999
Q gi|254780368|r 26 IETENTKISMNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESN--ETLEPLSIAKILRE 103 (249)
Q Consensus 26 i~~~~~~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~--~~~D~~~~A~~La~ 103 (249)
+-.+.....+||+|..+|++|.+|+++ .|++|+++++|+. .++.+++++++|+|+.++++++ +..++...+.+|++
T Consensus 8 Vv~E~~~g~l~~~slElL~~A~~LA~~-~G~~V~alv~G~~-~~~~~~~l~a~Gad~Vi~v~~~~l~~~~~e~~a~aLa~ 85 (177)
T 3ih5_A 8 VYCEIEEGIVADVSLELLTKGRSLANE-LNCQLEAVVAGTG-LKEIEKQILPYGVDKLHVFDAEGLYPYTSLPHTSILVN 85 (177)
T ss_dssp EECCEETTEECHHHHHHHHHHHHHHHH-HTCCEEEEEEESC-CTTTHHHHGGGTCSEEEEEECGGGSSCCHHHHHHHHHH
T ss_pred EEEECCCCEECHHHHHHHHHHHHHHHH-CCCCEEEEEECCC-HHHHHHHHHHCCCCEEEEECCCHHCCCCHHHHHHHHHH
T ss_conf 999835999988999999999999986-4994899996797-58988765212762499976720023206789999998
Q ss_pred HHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 861268649999611358886128999999857961332443343
Q gi|254780368|r 104 IVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIKI 148 (249)
Q Consensus 104 ~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~~ 148 (249)
++++.+||+||+|..+.+++ ++|++|.+||+|+++.|.+-.+
T Consensus 86 ~ik~~~p~lVL~g~Ts~Grd---laprLAa~LgaglvsdV~~~~~ 127 (177)
T 3ih5_A 86 LFKEEQPQICLXGATVIGRD---LGPRVSSALTSGLTADCHRPQX 127 (177)
T ss_dssp HHHHHCCSEEEEECSHHHHH---HHHHHHHHTTCCCBCSCSSSEE
T ss_pred HHHHCCCCEEEECCCHHHHH---HHHHHHHHHCCCCCCCECCCEE
T ss_conf 87532651588526874878---9999999849986413597489
No 9
>>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.97A {Archaeoglobus fulgidus} (A:)
Probab=94.57 E-value=0.063 Score=32.21 Aligned_cols=99 Identities=12% Similarity=0.042 Sum_probs=61.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHH----------HHHHHHHH----HHCCCCCEEEECCCCCCHHHHHHHH
Q ss_conf 601368999999998559985289999714101----------58888878----5077762376336547889999999
Q gi|254780368|r 36 NPFDEIALEESLQLREKGIATEVIVVSIGSCKV----------EEVLKNSL----AMGADRGILIESNETLEPLSIAKIL 101 (249)
Q Consensus 36 n~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~----------~~~Lr~al----AmGaD~ai~i~d~~~~D~~~~A~~L 101 (249)
++..+.|++.|+++... .+++++++++-++.. ++.++++. ..|.+--+.+.-..+ ..+..|
T Consensus 35 s~~s~~~l~~a~~la~~-~~~~l~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~i 109 (155)
T 3dlo_A 35 SDRAERVLRFAAEEARL-RGVPVYVVHSLPGGGRTKDEDIIEAKETLSWAVSIIRKEGAEGEEHLLVRGK----EPPDDI 109 (155)
T ss_dssp SHHHHHHHHHHHHHHHH-HTCCEEEEEEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEESSS----CHHHHH
T ss_pred CHHHHHHHHHHHHHHHH-CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC----CHHHHH
T ss_conf 98899999999999986-5994999998605888866779999999999999999719997899999348----989999
Q ss_pred HHHHHCCCCCEEEEEECCCCCC----CEEHHHHHHHHHCCCC
Q ss_conf 9986126864999961135888----6128999999857961
Q gi|254780368|r 102 REIVKKENPIIVIAGKQTTDNE----SNQTGQMLAALMRWPQ 139 (249)
Q Consensus 102 a~~i~~~~~DLIl~G~~S~D~~----~g~v~~~lA~~Lg~p~ 139 (249)
-++++..++|||++|...-.+- .|.+.-.+......|-
T Consensus 110 ~~~~~~~~~dliv~G~~~~~~~~~~~~Gs~~~~il~~~~~pv 151 (155)
T 3dlo_A 110 VDFADEVDAIAIVIGIRKRSPTGKLIFGSVARDVILKANKPV 151 (155)
T ss_dssp HHHHHHTTCSEEEEECCEECTTSCEECCHHHHHHHHHCSSCE
T ss_pred HHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCE
T ss_conf 999997399899983468885232504809999996499989
No 10
>>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} (A:)
Probab=93.80 E-value=0.35 Score=27.43 Aligned_cols=105 Identities=15% Similarity=0.027 Sum_probs=65.0
Q ss_pred CEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHH----------------HHHHHHHHHHCCCCCEEEECC--CCCC
Q ss_conf 7332601368999999998559985289999714101----------------588888785077762376336--5478
Q gi|254780368|r 32 KISMNPFDEIALEESLQLREKGIATEVIVVSIGSCKV----------------EEVLKNSLAMGADRGILIESN--ETLE 93 (249)
Q Consensus 32 ~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~----------------~~~Lr~alAmGaD~ai~i~d~--~~~D 93 (249)
+..-++..+.|++.|+++... .+.+++++++-+... ...+................. ..-+
T Consensus 8 ~vd~s~~~~~al~~a~~la~~-~~~~i~ll~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 86 (137)
T 2z08_A 8 AYDGSEHARRAAEVAKAEAEA-HGARLIVVHAYEPVPDYLGEPFFEEALRRRLERAEGVLEEARALTGVPKEDALLLEGV 86 (137)
T ss_dssp ECCSSHHHHHHHHHHHHHHHH-HTCEEEEEEEECC--------------CHHHHHHHHHHHHHHHHHCCCGGGEEEEESS
T ss_pred EECCCHHHHHHHHHHHHHHHH-CCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC
T ss_conf 988998999999999999987-5999999987514664235502689999999999998999998579971899998057
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCCCC----EEHHHHHHHHHCCCCE
Q ss_conf 8999999999861268649999611358886----1289999998579613
Q gi|254780368|r 94 PLSIAKILREIVKKENPIIVIAGKQTTDNES----NQTGQMLAALMRWPQA 140 (249)
Q Consensus 94 ~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~----g~v~~~lA~~Lg~p~v 140 (249)
.+..|...+++.++|||++|.+.-.+-. |.+.-.+.....+|-+
T Consensus 87 ---~~~~I~~~a~~~~~dliviG~~~~~~~~~~~~gs~~~~ll~~~~~pVl 134 (137)
T 2z08_A 87 ---PAEAILQAARAEKADLIVMGTRGLGALGSLFLGSQSQRVVAEAPCPVL 134 (137)
T ss_dssp ---HHHHHHHHHHHTTCSEEEEESSCTTCCSCSSSCHHHHHHHHHCSSCEE
T ss_pred ---HHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHCCCCCEE
T ss_conf ---489999987654445225556799851103147099999964899899
No 11
>>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} (A:)
Probab=93.55 E-value=0.25 Score=28.37 Aligned_cols=104 Identities=17% Similarity=0.136 Sum_probs=63.1
Q ss_pred EECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCH-----------------------------------HHHHHHHHHH
Q ss_conf 33260136899999999855998528999971410-----------------------------------1588888785
Q gi|254780368|r 33 ISMNPFDEIALEESLQLREKGIATEVIVVSIGSCK-----------------------------------VEEVLKNSLA 77 (249)
Q Consensus 33 ~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~-----------------------------------~~~~Lr~alA 77 (249)
.--++....||+.|+++... .+.+++++++=++. +++.|..+..
T Consensus 12 vD~s~~s~~al~~a~~~a~~-~~~~i~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 90 (162)
T 1mjh_A 12 TDFSETAEIALKHVKAFKTL-KAEEVILLHVIDEREIKKRDIFSLLLGVAGLNKSVEEFENELKNKLTEEAKNKMENIKK 90 (162)
T ss_dssp CCSCHHHHHHHHHHHHTCCS-SCCEEEEEEEEEGGGTC-----------------CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCHHHHHHHHHHHHHHHH-CCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88998999999999999875-39969999997035555443322223533332007788999999999999999999999
Q ss_pred HCCCCCEEEECC-CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCC----CEEHHHHHHHHHCCCCE
Q ss_conf 077762376336-5478899999999986126864999961135888----61289999998579613
Q gi|254780368|r 78 MGADRGILIESN-ETLEPLSIAKILREIVKKENPIIVIAGKQTTDNE----SNQTGQMLAALMRWPQA 140 (249)
Q Consensus 78 mGaD~ai~i~d~-~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~----~g~v~~~lA~~Lg~p~v 140 (249)
..-+..+.+... ...+ .+..|..+++..++|||++|.+.-..- .|.+.-.+......|.+
T Consensus 91 ~~~~~~~~~~~~~~~g~---~~~~I~~~a~~~~~dliVlG~~~~~~~~~~~~Gs~~~~il~~~~~pVl 155 (162)
T 1mjh_A 91 ELEDVGFKVKDIIVVGI---PHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKSNKPVL 155 (162)
T ss_dssp HHHHTTCEEEEEEEEEC---HHHHHHHHHHHTTCSEEEEESCCSSCCTTCSSCHHHHHHHHHCCSCEE
T ss_pred HHHHCCCEEEEEEEECC---HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEE
T ss_conf 88765976999999466---899998886315678799806899865446107499999961899899
No 12
>>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} (A:14-156)
Probab=93.26 E-value=0.54 Score=26.22 Aligned_cols=97 Identities=15% Similarity=0.133 Sum_probs=59.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHH-----------HHH--------HH---H-HHHHCCCCCEEEECCCCC
Q ss_conf 601368999999998559985289999714101-----------588--------88---8-785077762376336547
Q gi|254780368|r 36 NPFDEIALEESLQLREKGIATEVIVVSIGSCKV-----------EEV--------LK---N-SLAMGADRGILIESNETL 92 (249)
Q Consensus 36 n~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~-----------~~~--------Lr---~-alAmGaD~ai~i~d~~~~ 92 (249)
++..+.|++.|.++... .+.+++++++=+... .+. +. + +-..+.+-......-
T Consensus 14 s~~s~~al~~A~~~a~~-~~a~i~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 89 (143)
T 3fg9_A 14 NTSSERAFRYATTLAHD-YDVPLGICSVLESEDINIFDSLTPSKIQAKRKHVEDVVAEYVQLAEQRGVNQVEPLVYE--- 89 (143)
T ss_dssp CHHHHHHHHHHHHHHHH-HTCCEEEEEEECCCCTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEE---
T ss_pred CHHHHHHHHHHHHHHHH-CCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE---
T ss_conf 99999999999998876-39789999988615534323368779999999999999999998886078750479986---
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHC
Q ss_conf 88999999999861268649999611358886128999999857
Q gi|254780368|r 93 EPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMR 136 (249)
Q Consensus 93 D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg 136 (249)
..-..+..|..++++.++|||++|....++-...+|+.....+.
T Consensus 90 ~~~~~~~~i~~~~~~~~~dliV~G~~~~~~~~~~lGs~~~~l~~ 133 (143)
T 3fg9_A 90 GGDVDDVILEQVIPEFKPDLLVTGADTEFPHSKIAGAIGPRLAR 133 (143)
T ss_dssp CSCHHHHHHHTHHHHHCCSEEEEETTCCCTTSSSCSCHHHHHHH
T ss_pred ECHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHH
T ss_conf 30047887510568749989997178998633330759999997
No 13
>>2pfs_A USP, universal stress protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.25A {Nitrosomonas europaea atcc 19718} (A:)
Probab=91.82 E-value=0.94 Score=24.64 Aligned_cols=100 Identities=10% Similarity=0.084 Sum_probs=62.2
Q ss_pred ECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHH----------------------HHHHHHHHHHCCC-----CCEEE
Q ss_conf 32601368999999998559985289999714101----------------------5888887850777-----62376
Q gi|254780368|r 34 SMNPFDEIALEESLQLREKGIATEVIVVSIGSCKV----------------------EEVLKNSLAMGAD-----RGILI 86 (249)
Q Consensus 34 ~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~----------------------~~~Lr~alAmGaD-----~ai~i 86 (249)
.-++....|++.|+++..+ .+.+++++.+=+... .+.+.....+... .-.++
T Consensus 14 d~s~~s~~al~~a~~~a~~-~~~~i~~lhv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (150)
T 2pfs_A 14 DFSSEDSQVVQKVRNLASQ-IGARLSLIHVLDNIPXPDTPYGTAIPLDTETTYDAXLDVEKQKLSQIGNTLGIDPAHRWL 92 (150)
T ss_dssp CCCTTHHHHHHHHHHHHHH-HTCEEEEEEEEC----------CCCCSSSCCCHHHHHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred CCCHHHHHHHHHHHHHHHH-CCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 3998999999999999987-299068888852255544443333200069999999999999999888754987507999
Q ss_pred ECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCC---CCCCEEHHHHHHHHHCCCCE
Q ss_conf 3365478899999999986126864999961135---88861289999998579613
Q gi|254780368|r 87 ESNETLEPLSIAKILREIVKKENPIIVIAGKQTT---DNESNQTGQMLAALMRWPQA 140 (249)
Q Consensus 87 ~d~~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~---D~~~g~v~~~lA~~Lg~p~v 140 (249)
.. + + .+..|...+++.++|||++|.+.- +.--|.+.-.+......|-+
T Consensus 93 ~~--g-~---~~~~i~~~a~~~~~dliv~g~~~~~~~~~~~gs~~~~li~~~~~PVl 143 (150)
T 2pfs_A 93 VW--G-E---PREEIIRIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHYAKCDVL 143 (150)
T ss_dssp EE--S-C---HHHHHHHHHHHTTCSEEEEEEC----------CHHHHHHHHCSSEEE
T ss_pred EE--C-C---HHHHHHHHHHHCCCCEEEEECCCCCCCCCEECCHHHHHHHCCCCCEE
T ss_conf 81--7-8---89999999997398379996899996424627789999853799899
No 14
>>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A, structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii OT3} (A:)
Probab=91.71 E-value=0.98 Score=24.54 Aligned_cols=103 Identities=14% Similarity=-0.021 Sum_probs=62.4
Q ss_pred EECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHH------------------------------HHHHHHHHH--CC
Q ss_conf 3326013689999999985599852899997141015------------------------------888887850--77
Q gi|254780368|r 33 ISMNPFDEIALEESLQLREKGIATEVIVVSIGSCKVE------------------------------EVLKNSLAM--GA 80 (249)
Q Consensus 33 ~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~------------------------------~~Lr~alAm--Ga 80 (249)
.--++....|++.|+.+... .+.+++++++-+.... ..+.+.... ..
T Consensus 12 vd~s~~s~~al~~a~~la~~-~~~~i~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (170)
T 2dum_A 12 TDFSEGAYRAVEVFEKRNKM-EVGEVILLHVIDEGTLEELMDGYSFFYDNAEIELKDIKEKLKEEASRKLQEKAEEVKRA 90 (170)
T ss_dssp CCSSHHHHHHHHHHHHHCCS-CCSEEEEEEEEETTGGGCCC------------CCTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCHHHHHHHHHHHHHHHH-CCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 75998999999999999876-49979999995476444444443334442023379999999999999999999999975
Q ss_pred CCCEEEE--CCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC----EEHHHHHHHHHCCCCE
Q ss_conf 7623763--3654788999999999861268649999611358886----1289999998579613
Q gi|254780368|r 81 DRGILIE--SNETLEPLSIAKILREIVKKENPIIVIAGKQTTDNES----NQTGQMLAALMRWPQA 140 (249)
Q Consensus 81 D~ai~i~--d~~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~----g~v~~~lA~~Lg~p~v 140 (249)
...+.+. -..+ + .+..|..+++..++|||+.|.+....-. |.+.-.+......|-+
T Consensus 91 ~~~~~~~~~~~~g-~---~~~~I~~~a~~~~~dliv~G~~~~~~~~~~~~gs~~~~i~~~~~~pVl 152 (170)
T 2dum_A 91 FRAKNVRTIIRFG-I---PWDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKTKKPVL 152 (170)
T ss_dssp TTCSEEEEEEEEE-C---HHHHHHHHHHHTTCSEEEEESCCCCC--TTCCCHHHHHHHHHCSSCEE
T ss_pred CCCCCEEEEEEEC-C---HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEE
T ss_conf 7998679999816-3---265555654136750799853689865545007699999962899899
No 15
>>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} (A:)
Probab=90.91 E-value=1.1 Score=24.10 Aligned_cols=84 Identities=11% Similarity=0.069 Sum_probs=52.1
Q ss_pred CEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHH-------------------------HHHHHHH----HCCCC
Q ss_conf 733260136899999999855998528999971410158-------------------------8888785----07776
Q gi|254780368|r 32 KISMNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEE-------------------------VLKNSLA----MGADR 82 (249)
Q Consensus 32 ~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~-------------------------~Lr~alA----mGaD~ 82 (249)
..-.++..++|++.|+.+..+ .|.+++++++=+..... .+..... .|.+-
T Consensus 10 ~vD~s~~s~~al~~a~~~a~~-~~~~i~~~hv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (138)
T 1q77_A 10 LTDAYSDCEKAITYAVNFSEK-LGAELDILAVLEDVYNLERANVTFGLPFPPEIKEESKKRIERRLREVWEKLTGSTEIP 88 (138)
T ss_dssp EESTTCCCHHHHHHHHHHHTT-TCCEEEEEEECHHHHHHHHHHHHHCCCCCTHHHHHHHHHHHHHHHHHHHHHHSCCCCC
T ss_pred EEECCHHHHHHHHHHHHHHHH-CCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 983999999999999998876-2956999995367521223333346643088999999888888999999863366416
Q ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 2376336547889999999998612686499996113588
Q gi|254780368|r 83 GILIESNETLEPLSIAKILREIVKKENPIIVIAGKQTTDN 122 (249)
Q Consensus 83 ai~i~d~~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~ 122 (249)
-+++. .+ ..+..|.++++..++|||++|.+....
T Consensus 89 ~~~~~--~g----~~~~~I~~~a~~~~~dliVvG~~~~~~ 122 (138)
T 1q77_A 89 GVEYR--IG----PLSEEVKKFVEGKGYELVVWACYPSAY 122 (138)
T ss_dssp CEEEE--CS----CHHHHHHHHHTTSCCSEEEECSCCGGG
T ss_pred EEEEE--CC----CHHHHHHHHHHHCCCCEEEECCCCCCH
T ss_conf 88750--69----659999999998499999996899852
No 16
>>3fdx_A Putative filament protein / universal stress protein F; structural genomics, APC60640.1, PSI-2, protein structure initiative; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* (A:)
Probab=90.18 E-value=1.4 Score=23.63 Aligned_cols=97 Identities=13% Similarity=0.023 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCEEEEEECCCHH-----------------------HHHHHHHHHHCCCCCEEEECC-CCCC
Q ss_conf 1368999999998559985289999714101-----------------------588888785077762376336-5478
Q gi|254780368|r 38 FDEIALEESLQLREKGIATEVIVVSIGSCKV-----------------------EEVLKNSLAMGADRGILIESN-ETLE 93 (249)
Q Consensus 38 ~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~-----------------------~~~Lr~alAmGaD~ai~i~d~-~~~D 93 (249)
+.+.|++.|+.+... .+.+++++.+=+... ...++.+..+.....+.+... ...+
T Consensus 15 ~s~~al~~A~~~a~~-~~~~i~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g~ 93 (143)
T 3fdx_A 15 FTERIISHVESEARI-DDAEVHFLTVIPSLPYYASLGXAYTAELPGXDELREGSETQLKEIAKKFSIPEDRXHFHVAEGS 93 (143)
T ss_dssp CCTTHHHHHHHHHHH-HTCEEEEEEEECC----------------CHHHHHHHHHHHHHHHHTTSCCCGGGEEEEEEESC
T ss_pred HHHHHHHHHHHHHHH-CCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
T ss_conf 999999999999987-3997999975788643343333433112799999999999999999982479964999996288
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHH---HHHHHHCCC
Q ss_conf 899999999986126864999961135888612899---999985796
Q gi|254780368|r 94 PLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQ---MLAALMRWP 138 (249)
Q Consensus 94 ~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~---~lA~~Lg~p 138 (249)
+ ++.|...++..++|||++|.+.........|+ .+......|
T Consensus 94 ~---~~~i~~~a~~~~~dliVlG~~~~~~~~~~~gs~~~~v~~~~~~p 138 (143)
T 3fdx_A 94 P---KDKILALAKSLPADLVIIASHRPDITTYLLGSNAAAVVRHAECS 138 (143)
T ss_dssp H---HHHHHHHHHHTTCSEEEEESSCTTCCSCSSCHHHHHHHHHCSSE
T ss_pred H---HHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCC
T ss_conf 7---89999999871678899737889866660286999999639999
No 17
>>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP, protein structure initiative; HET: MSE AMP; 2.46A {Arabidopsis thaliana} (A:)
Probab=90.14 E-value=1.2 Score=23.95 Aligned_cols=106 Identities=13% Similarity=0.108 Sum_probs=60.9
Q ss_pred CEECCCHHHHHHHHHHHHHH--CCCCCCEEEEEECCC---------------------------HHHHHHHHHHHHCCCC
Q ss_conf 73326013689999999985--599852899997141---------------------------0158888878507776
Q gi|254780368|r 32 KISMNPFDEIALEESLQLRE--KGIATEVIVVSIGSC---------------------------KVEEVLKNSLAMGADR 82 (249)
Q Consensus 32 ~~~in~~D~~AlE~Al~lke--~~~g~~V~~lsvG~~---------------------------~~~~~Lr~alAmGaD~ 82 (249)
...-++....|++.|+++.- +..+.+++++++=+. .+...|.+........
T Consensus 20 ~vd~s~~s~~al~~A~~~~~~a~~~~~~i~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 99 (175)
T 2gm3_A 20 YPNPSISCKRAFEWTLEKIVRSNTSDFKILLLHVQVVDEDGFDDVDSIYASPEDFRDXRQSNKAKGLHLLEFFVNKCHEI 99 (175)
T ss_dssp TTCBCHHHHHHHHHHHHHTTTTCTTSEEEEEEEEEC----------CCCCSHHHHHHHTTSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 66777999999999999998708975899999802777533233454457888999999999999999999999999862
Q ss_pred CEEEECC-CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC----EEHHHHHHHHHCCCCE
Q ss_conf 2376336-54788999999999861268649999611358886----1289999998579613
Q gi|254780368|r 83 GILIESN-ETLEPLSIAKILREIVKKENPIIVIAGKQTTDNES----NQTGQMLAALMRWPQA 140 (249)
Q Consensus 83 ai~i~d~-~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~----g~v~~~lA~~Lg~p~v 140 (249)
.+.+... ...++ +..|..+++..++|||++|.+.-.+-. |.+.-.+......|-+
T Consensus 100 ~v~~~~~v~~g~~---~~~I~~~a~~~~~dliVlG~~~~~~~~~~~~Gs~~~~vl~~~~~pVl 159 (175)
T 2gm3_A 100 GVGCEAWIKTGDP---KDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAECPVX 159 (175)
T ss_dssp TCEEEEEEEESCH---HHHHHHHHHHHCCSEEEEEECCCC--------CHHHHHHHHCSSCEE
T ss_pred CCCEEEEEECCCH---HHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCEE
T ss_conf 8835997521888---99999999983575688547899866656238699999837898989
No 18
>>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} (A:)
Probab=88.69 E-value=1.7 Score=23.00 Aligned_cols=98 Identities=6% Similarity=0.140 Sum_probs=57.3
Q ss_pred ECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHH-----------------------HHHHHHHHHCCCCC-EEEECC
Q ss_conf 326013689999999985599852899997141015-----------------------88888785077762-376336
Q gi|254780368|r 34 SMNPFDEIALEESLQLREKGIATEVIVVSIGSCKVE-----------------------EVLKNSLAMGADRG-ILIESN 89 (249)
Q Consensus 34 ~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~-----------------------~~Lr~alAmGaD~a-i~i~d~ 89 (249)
--++..+.|++.|..+..+ .+.+++++.+-+.... .....+...+.-.. +.+.
T Consensus 10 d~s~~s~~al~~a~~~a~~-~~~~i~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 86 (141)
T 1jmv_A 10 DLSEESPILLKKAVGIAKR-HDAKLSIIHVDVNFSDLYTGLIDVNMSSMQDRISTETQKALLDLAESVDYPISEKLSG-- 86 (141)
T ss_dssp CCSTTHHHHHHHHHHHHHH-HTCEEEEEEEEECCGGGCCCCEEHHHHHHTTCCCCHHHHHHHHHHHHSSSCCCCEEEE--
T ss_pred CCCHHHHHHHHHHHHHHHH-CCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE--
T ss_conf 8998999999999999987-5994899998411453100235566899999999999999999998649972699997--
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCC-CEEHHHHHHHHHCCC
Q ss_conf 5478899999999986126864999961135888-612899999985796
Q gi|254780368|r 90 ETLEPLSIAKILREIVKKENPIIVIAGKQTTDNE-SNQTGQMLAALMRWP 138 (249)
Q Consensus 90 ~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~-~g~v~~~lA~~Lg~p 138 (249)
.+ ..+..|...+++.++|||++|.+.-++- -|.+...+......|
T Consensus 87 ~g----~~~~~i~~~a~~~~~dliV~G~~~~~~~~~gs~~~~i~~~~~~p 132 (141)
T 1jmv_A 87 SG----DLGQVLSDAIEQYDVDLLVTGHHQDFWSKLMSSTRQVMNTIKID 132 (141)
T ss_dssp EE----CHHHHHHHHHHHTTCCEEEEEECCCCHHHHHHHHHHHHTTCCSE
T ss_pred CC----CHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCC
T ss_conf 17----82089999875469999998568999885423999998615998
No 19
>>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} (B:310-418)
Probab=88.29 E-value=1.8 Score=22.76 Aligned_cols=86 Identities=17% Similarity=0.207 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEEEEC--CCHHHHHHHHHHH-HCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 36899999999855998528999971--4101588888785-07776237633654788999999999861268649999
Q gi|254780368|r 39 DEIALEESLQLREKGIATEVIVVSIG--SCKVEEVLKNSLA-MGADRGILIESNETLEPLSIAKILREIVKKENPIIVIA 115 (249)
Q Consensus 39 D~~AlE~Al~lke~~~g~~V~~lsvG--~~~~~~~Lr~alA-mGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~~DLIl~ 115 (249)
-.+++-.+--|+|- |-+++++..+ .+...+.+++.+. .+.+..+.+ ++. |.+. |.+.++..++||+++
T Consensus 12 ~~~~~~l~~~l~El--Gm~vv~~~~~~~~~~~~~~~~~~l~~~~~~~~~vv-~~~--d~~e----l~~~i~~~~pDliig 82 (109)
T 1mio_B 12 PDEIIALSKFIIEL--GAIPKYVVTGTPGMKFQKEIDAMLAEAGIEGSKVK-VEG--DFFD----VHQWIKNEGVDLLIS 82 (109)
T ss_dssp HHHHHHHHHHHHTT--TCEEEEEEESSCCHHHHHHHHHHHHTTTCCSCEEE-ESC--BHHH----HHHHHHHSCCSEEEE
T ss_pred CHHHHHHHHHHHHC--CCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEE-ECC--CHHH----HHHHHHHCCCCEEEE
T ss_conf 18899999999984--99014887268977778999999986589887899-799--9999----999997449999997
Q ss_pred EECCCCCCCEEHHHHHHHHHCCCCEEE
Q ss_conf 611358886128999999857961332
Q gi|254780368|r 116 GKQTTDNESNQTGQMLAALMRWPQATF 142 (249)
Q Consensus 116 G~~S~D~~~g~v~~~lA~~Lg~p~vt~ 142 (249)
|. -+-.+|..||+|++..
T Consensus 83 ~s---------~~~~~a~klgiP~i~i 100 (109)
T 1mio_B 83 NT---------YGKFIAREENIPFVRF 100 (109)
T ss_dssp SG---------GGHHHHHHHTCCEEEC
T ss_pred CC---------HHHHHHHHCCCCEEEE
T ss_conf 94---------5899999829998984
No 20
>>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} (A:)
Probab=87.37 E-value=2.1 Score=22.40 Aligned_cols=94 Identities=15% Similarity=0.193 Sum_probs=56.0
Q ss_pred HHHHHCCCCCCEEEEEECCC--------HHHHHHHHHHHHCCCCCEEEECC--CCCCHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 99985599852899997141--------01588888785077762376336--547889999999998612686499996
Q gi|254780368|r 47 LQLREKGIATEVIVVSIGSC--------KVEEVLKNSLAMGADRGILIESN--ETLEPLSIAKILREIVKKENPIIVIAG 116 (249)
Q Consensus 47 l~lke~~~g~~V~~lsvG~~--------~~~~~Lr~alAmGaD~ai~i~d~--~~~D~~~~A~~La~~i~~~~~DLIl~G 116 (249)
.++++++.-..|+.+|-|.. +..+..+-+-.+|+++.+++.-+ ...+...+...|+..+++..+|+|++-
T Consensus 23 a~~~~~G~~v~vv~lt~G~~~~~~~~~~R~~E~~~a~~~LG~~~~~~l~~~d~~~~~~~~~~~~l~~~i~~~~Pdvv~t~ 102 (227)
T 1uan_A 23 ARAKAEGLSTGILDLTRGEMGSKGTPEEREKEVAEASRILGLDFRGNLGFPDGGLADVPEQRLKLAQALRRLRPRVVFAP 102 (227)
T ss_dssp HHHHHTTCCEEEEEEECCTTTCCSCHHHHHHHHHHHHHHHTCSEEEEEEECTTCCCCCHHHHHHHHHHHHHHCEEEEEEE
T ss_pred HHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCHHHHHHHHHHEECCCCCEEEEC
T ss_conf 99997699299999748978888768888988766664256342211321111223444541113442102565489806
Q ss_pred ECC-CCCCCEEHHHHHH---HHHCCCCE
Q ss_conf 113-5888612899999---98579613
Q gi|254780368|r 117 KQT-TDNESNQTGQMLA---ALMRWPQA 140 (249)
Q Consensus 117 ~~S-~D~~~g~v~~~lA---~~Lg~p~v 140 (249)
... ...++-.++-.+- ..++.|..
T Consensus 103 ~~~d~H~DH~~~~~av~~a~~~~~~~~~ 130 (227)
T 1uan_A 103 LEADRHPDHTAASRLAVAAVHLAGLRKA 130 (227)
T ss_dssp CSCCSSHHHHHHHHHHHHHHHHHTCTTS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 8655652117889999999998558765
No 21
>>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} (A:1-86,A:293-306)
Probab=85.29 E-value=2 Score=22.57 Aligned_cols=74 Identities=20% Similarity=0.183 Sum_probs=47.0
Q ss_pred EEEEECCCHHHH--------HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHH
Q ss_conf 999971410158--------888878507776237633654788999999999861268649999611358886128999
Q gi|254780368|r 59 IVVSIGSCKVEE--------VLKNSLAMGADRGILIESNETLEPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQM 130 (249)
Q Consensus 59 ~~lsvG~~~~~~--------~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~ 130 (249)
+++-+|+.+.|. .+.++|...-.+.+.+..+.... ...+...+|++|---+-..+..|+++++
T Consensus 5 I~il~GG~SsE~evSl~Sa~~i~~aL~~~g~~v~~i~~~~~~~---------~~~~~~~~D~vf~~lHG~~GEDG~IQgl 75 (100)
T 1iow_A 5 IAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVDV---------TQLKSMGFQKVFIALHGRGGEDGTLQGM 75 (100)
T ss_dssp EEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTSCG---------GGTTTTTEEEEEECCCSTTTSSSHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCH---------HHHHHCCCCEEEEECCCCCCCCHHHHHH
T ss_conf 9999386874228499999999999988699799988984118---------8875459879999167885437799999
Q ss_pred HHHHHCCCCEEE
Q ss_conf 999857961332
Q gi|254780368|r 131 LAALMRWPQATF 142 (249)
Q Consensus 131 lA~~Lg~p~vt~ 142 (249)
+ ++||+|++..
T Consensus 76 L-E~lgIPYtGs 86 (100)
T 1iow_A 76 L-ELMGLPYTGS 86 (100)
T ss_dssp H-HHHTCCBSSC
T ss_pred H-HHCCCEEECC
T ss_conf 9-9849845249
No 22
>>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus} (A:)
Probab=84.51 E-value=2.9 Score=21.50 Aligned_cols=92 Identities=9% Similarity=0.095 Sum_probs=54.7
Q ss_pred HHHHHCCCCCCEEEEEECCC--------HHHHHHHHHHHHCCCCCEEEECC--CCCCHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 99985599852899997141--------01588888785077762376336--547889999999998612686499996
Q gi|254780368|r 47 LQLREKGIATEVIVVSIGSC--------KVEEVLKNSLAMGADRGILIESN--ETLEPLSIAKILREIVKKENPIIVIAG 116 (249)
Q Consensus 47 l~lke~~~g~~V~~lsvG~~--------~~~~~Lr~alAmGaD~ai~i~d~--~~~D~~~~A~~La~~i~~~~~DLIl~G 116 (249)
.++.+.+....|+.+|-|.. +..+..+-+-.+|+++-.++..+ ...+...+...|...+++..+|+|++-
T Consensus 25 a~~~~~G~~v~vv~lT~G~~~~~~~~~~R~~E~~~a~~~lG~~~~~~l~~~D~~~~~~~~~~~~l~~~i~~~~Pd~v~t~ 104 (242)
T 2ixd_A 25 AKYTKQGYEVGICDLTEADLSSNGTIELRKEEAKVAARIMGVKTRLNLAMPDRGLYMKEEYIREIVKVIRTYKPKLVFAP 104 (242)
T ss_dssp HHHHHTTCCEEEEEEECCTTCSSSCHHHHHHHHHHHHHHHTCCEEEEEEECTTCCCCCHHHHHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHEECCCCCCEEEEC
T ss_conf 99998799199999828977766407778999998740468753787688864200389998642220301666589824
Q ss_pred EC-CCCCCCEEHHHH---HHHHHCCC
Q ss_conf 11-358886128999---99985796
Q gi|254780368|r 117 KQ-TTDNESNQTGQM---LAALMRWP 138 (249)
Q Consensus 117 ~~-S~D~~~g~v~~~---lA~~Lg~p 138 (249)
.. ..-.+.-++.-. .+..++++
T Consensus 105 ~~~~~H~DH~~~~~a~~~a~~~~~~~ 130 (242)
T 2ixd_A 105 YYEDRHPDHANCAKLVEEAIFSAGIR 130 (242)
T ss_dssp CSCSSSHHHHHHHHHHHHHHHHHTCT
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 54345334554445555433320452
No 23
>>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* (A:)
Probab=82.83 E-value=1.4 Score=23.60 Aligned_cols=33 Identities=18% Similarity=0.104 Sum_probs=26.2
Q ss_pred CEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf 7332601368999999998559985289999714
Q gi|254780368|r 32 KISMNPFDEIALEESLQLREKGIATEVIVVSIGS 65 (249)
Q Consensus 32 ~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~ 65 (249)
+..-++...+|++.|.+|... .+.+++++.+..
T Consensus 25 ~vd~s~~~~~al~~a~~lA~~-~~~~i~~l~v~~ 57 (309)
T 3cis_A 25 GIDDSPAAQVAVRWAARDAEL-RKIPLTLVHAVS 57 (309)
T ss_dssp ECCSSHHHHHHHHHHHHHHHH-HTCCEEEEEECC
T ss_pred EECCCHHHHHHHHHHHHHHHH-CCCEEEEEEEEE
T ss_conf 978998899999999999998-599799999987
No 24
>>1m1n_B Nitrogenase molybdenum-iron protein beta chain; atomic resolution, FEMO cofactor, nitrogen fixation, central nitrogen ligand; HET: HCA CLF CFN; 1.16A {Azotobacter vinelandii} (B:33-63,B:339-522)
Probab=80.09 E-value=2.8 Score=21.61 Aligned_cols=102 Identities=11% Similarity=0.059 Sum_probs=53.4
Q ss_pred CCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEEC--CCHHHHHHHHHHH-HCCCCCEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 87733260136899999999855998528999971--4101588888785-07776237633654788999999999861
Q gi|254780368|r 30 NTKISMNPFDEIALEESLQLREKGIATEVIVVSIG--SCKVEEVLKNSLA-MGADRGILIESNETLEPLSIAKILREIVK 106 (249)
Q Consensus 30 ~~~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG--~~~~~~~Lr~alA-mGaD~ai~i~d~~~~D~~~~A~~La~~i~ 106 (249)
|.+..+-..-.+++-.+--|+|- |-++..+..+ ++...+.++..+. ...+....|.++ .|.+. +...++
T Consensus 56 GKrv~I~gd~~~~~~la~fL~El--Gm~vv~~~~~~~~~~~~e~~~~~l~~~~~~~~~~v~~~--~d~~e----~~~~i~ 127 (215)
T 1m1n_B 56 GKRFALWGDPDFVMGLVKFLLEL--GCEPVHILCHNGNKRWKKAVDAILAASPYGKNATVYIG--KDLWH----LRSLVF 127 (215)
T ss_dssp TCEEEEECCHHHHHHHHHHHHHT--TCEEEEEEETTCCHHHHHHHHHHHHTSGGGTTCEEEES--CCHHH----HHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEC--CCHHH----HHHHHH
T ss_conf 98799988828999999999986--99734999458997899999999852556878779968--99999----999986
Q ss_pred CCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEE
Q ss_conf 26864999961135888612899999985796133
Q gi|254780368|r 107 KENPIIVIAGKQTTDNESNQTGQMLAALMRWPQAT 141 (249)
Q Consensus 107 ~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt 141 (249)
+.++||+|++.. .....+.-..+|..||+|++.
T Consensus 128 ~~~pDLiig~s~--ek~~a~~~r~~a~~lgiPli~ 160 (215)
T 1m1n_B 128 TDKPDFMIGNSY--GKFIQRDTLHKGKEFEVPLIR 160 (215)
T ss_dssp HSCCSEEEECTT--HHHHHHHHHHHCGGGCCCEEE
T ss_pred HCCCCEEEECCC--CHHHHHHHHHHHHHCCCCEEE
T ss_conf 279999997885--300112345678764998798
No 25
>>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis H37RV} (A:1-128)
Probab=80.02 E-value=4.2 Score=20.43 Aligned_cols=81 Identities=14% Similarity=0.147 Sum_probs=47.0
Q ss_pred CEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCH---------------------HHHHHHHHHHHCCCCCEEEEC--
Q ss_conf 733260136899999999855998528999971410---------------------158888878507776237633--
Q gi|254780368|r 32 KISMNPFDEIALEESLQLREKGIATEVIVVSIGSCK---------------------VEEVLKNSLAMGADRGILIES-- 88 (249)
Q Consensus 32 ~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~---------------------~~~~Lr~alAmGaD~ai~i~d-- 88 (249)
..--++...+|++.|+.|... .+..+.+..+-++. +++.|.++...-.+..+....
T Consensus 23 avD~S~~s~~al~~a~~la~~-~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 101 (128)
T 1tq8_A 23 GTDGSDSSXRAVDRAAQIAGA-DAKLIIASAYLPQHEDARAADILKDESYKVTGTAPIYEILHDAKERAHNAGAKNVEER 101 (128)
T ss_dssp ECCSSHHHHHHHHHHHHHHTT-TSEEEEEEECCC--------------------CCTHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred EECCCHHHHHHHHHHHHHHHC-CCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 989998999999999999854-8987999999615655442210002568999999999999999999997699629999
Q ss_pred -CCCCCHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf -65478899999999986126864999961
Q gi|254780368|r 89 -NETLEPLSIAKILREIVKKENPIIVIAGK 117 (249)
Q Consensus 89 -~~~~D~~~~A~~La~~i~~~~~DLIl~G~ 117 (249)
..| ++ +..|.+++++.++|||++|.
T Consensus 102 v~~G-~~---~~~I~~~a~~~~~DlIViGs 127 (128)
T 1tq8_A 102 PIVG-AP---VDALVNLADEEKADLLVVGN 127 (128)
T ss_dssp EECS-SH---HHHHHHHHHHTTCSEEEEEC
T ss_pred EEEC-CH---HHHHHHHHHCCCEEEEEECC
T ss_conf 9816-88---99998764035305899647
No 26
>>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} (A:)
Probab=79.75 E-value=4.3 Score=20.38 Aligned_cols=99 Identities=15% Similarity=0.024 Sum_probs=61.4
Q ss_pred CEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCH---------------------HHHHHHHHHHHCCCCCEEEECC-
Q ss_conf 733260136899999999855998528999971410---------------------1588888785077762376336-
Q gi|254780368|r 32 KISMNPFDEIALEESLQLREKGIATEVIVVSIGSCK---------------------VEEVLKNSLAMGADRGILIESN- 89 (249)
Q Consensus 32 ~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~---------------------~~~~Lr~alAmGaD~ai~i~d~- 89 (249)
+.--++...+|++.|.+|... .+.+++++.+-+.. +++.++.+...-...++.+...
T Consensus 28 ~vd~s~~s~~al~~a~~la~~-~~~~i~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 106 (294)
T 3loq_A 28 PTDLSENSFKVLEYLGDFKKV-GVEEIGVLFVINLTKLSTVSGGIDIDHYIDEXSEKAEEVLPEVAQKIEAAGIKAEVIK 106 (294)
T ss_dssp ECCSCTGGGGGGGGHHHHHHT-TCCEEEEECCEECTTC-----CCCTTHHHHHHHHHHHHHHHHHHHHHHHTTCEEEECS
T ss_pred EECCCHHHHHHHHHHHHHHHH-CCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 968999999999999999977-6998999999888654444454576899999999999999999999997699759999
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHH
Q ss_conf 547889999999998612686499996113588861289999998
Q gi|254780368|r 90 ETLEPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAAL 134 (249)
Q Consensus 90 ~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~ 134 (249)
...++ ...|...++..++|+|++|.....+..+......+..
T Consensus 107 ~~g~~---~~~i~~~a~~~~~dliv~g~~~~~~~~~~~~~~~~~~ 148 (294)
T 3loq_A 107 PFPAG---DPVVEIIKASENYSFIAXGSRGASKFKKILLGSVSEG 148 (294)
T ss_dssp SCCEE---CHHHHHHHHHTTSSEEEEECCCCCHHHHHHHCCHHHH
T ss_pred EEECC---CHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHH
T ss_conf 97159---9899999985489999989889999754768970676
No 27
>>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} (B:32-62,B:311-519)
Probab=79.15 E-value=3.8 Score=20.75 Aligned_cols=103 Identities=12% Similarity=0.077 Sum_probs=54.7
Q ss_pred CCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCC--HHHHHHHHHHHH-CCCCCEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 48773326013689999999985599852899997141--015888887850-777623763365478899999999986
Q gi|254780368|r 29 ENTKISMNPFDEIALEESLQLREKGIATEVIVVSIGSC--KVEEVLKNSLAM-GADRGILIESNETLEPLSIAKILREIV 105 (249)
Q Consensus 29 ~~~~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~--~~~~~Lr~alAm-GaD~ai~i~d~~~~D~~~~A~~La~~i 105 (249)
.+.+..+...-.+++-.+--|+|- |-+|.++..... ...+.++..+.. +.+....|..+. |.+. +.+.+
T Consensus 80 ~Gkrv~I~g~~~~~~~l~~~L~El--Gm~vv~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~--d~~e----~~~~i 151 (240)
T 1qgu_B 80 HGKKFGLYGDPDFVMGLTRFLLEL--GCEPTVILSHNANKRWQKAMNKMLDASPYGRDSEVFINC--DLWH----FRSLM 151 (240)
T ss_dssp TTCEEEEESCHHHHHHHHHHHHHT--TCEEEEEEETTCCHHHHHHHHHHHHHSTTCTTCEEEESC--CHHH----HHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECC--CHHH----HHHHH
T ss_conf 797799989828899999999987--995569863799878999999998747678887799689--9999----99998
Q ss_pred HCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEE
Q ss_conf 126864999961135888612899999985796133
Q gi|254780368|r 106 KKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQAT 141 (249)
Q Consensus 106 ~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt 141 (249)
++.++||+|.+... .....-...-+..+|+|++.
T Consensus 152 ~~~~pDLiigss~e--~~~a~~~~~~~~~~~iP~i~ 185 (240)
T 1qgu_B 152 FTRQPDFMIGNSYG--KFIQRDTLAKGKAFEVPLIR 185 (240)
T ss_dssp HHHCCSEEEECGGG--HHHHHHHHHHCGGGCCCEEE
T ss_pred HHCCCCEEEECCCH--HHHHHHHHHHHHHCCCCEEE
T ss_conf 62699999978620--55546554333423998798
No 28
>>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, binary complex; HET: GDP; 2.40A {Mycobacterium smegmatis str} PDB: 2gej_A* (A:1-197,A:367-406)
Probab=78.74 E-value=4.7 Score=20.18 Aligned_cols=108 Identities=11% Similarity=0.004 Sum_probs=70.7
Q ss_pred CEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCC----CCCHHHHHHHHHHHHHC
Q ss_conf 73326013689999999985599852899997141015888887850777623763365----47889999999998612
Q gi|254780368|r 32 KISMNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNE----TLEPLSIAKILREIVKK 107 (249)
Q Consensus 32 ~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~----~~D~~~~A~~La~~i~~ 107 (249)
....+....+..+.+-.|.++ |-+|++++.+.......... .-|.. .+.+.... ..-.+.....+...+++
T Consensus 31 ~~~~gG~~~~~~~l~~~L~~~--G~eV~vi~~~~~~~~~~~~~--~~~v~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 105 (237)
T 2gek_A 31 FDVPGGVQSHVLQLAEVLRDA--GHEVSVLAPASPHVKLPDYV--VSGGK-AVPIPYNGSVARLRFGPATHRKVKKWIAE 105 (237)
T ss_dssp TTSCCHHHHHHHHHHHHHHHT--TCEEEEEESCCTTSCCCTTE--EECCC-CC------------CCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHC--CCEEEEEECCCCCCCCCCCE--ECCCE-EEECCCCCCHHHHHCCHHHHHHHHHHHHH
T ss_conf 899988999999999999977--99899994189887776303--23726-99815676312220358999999999986
Q ss_pred CCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 68649999611358886128999999857961332443343
Q gi|254780368|r 108 ENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIKI 148 (249)
Q Consensus 108 ~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~~ 148 (249)
.++|+|.+- ....+..+...+..++.|.+........
T Consensus 106 ~~~DiI~~~----~~~~~~~~~~~~~~~~~p~v~~~h~~~~ 142 (237)
T 2gek_A 106 GDFDVLHIH----EPNAPSLSMLALQAAEGPIVATFHTSTT 142 (237)
T ss_dssp HCCSEEEEE----CCCSSSHHHHHHHHEESSEEEEECCCCC
T ss_pred CCCCEEEEE----EECCCCHHHHHHHHCCCCCCEEEEECCC
T ss_conf 077636886----4033202466787528985214421012
No 29
>>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} (A:1-171,A:340-364)
Probab=78.62 E-value=4.7 Score=20.15 Aligned_cols=102 Identities=15% Similarity=0.074 Sum_probs=65.0
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCC--C----------CCHHHHHHHHH
Q ss_conf 26013689999999985599852899997141015888887850777623763365--4----------78899999999
Q gi|254780368|r 35 MNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNE--T----------LEPLSIAKILR 102 (249)
Q Consensus 35 in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~--~----------~D~~~~A~~La 102 (249)
.+....++++.|-.|+++ |-+|++++.......+.+. ..|.. -..+.... . ...+.....+.
T Consensus 16 ~gG~~~~~~~la~~L~~~--G~eV~v~~~~~~~~~~~~~---~~g~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 89 (196)
T 1f0k_A 16 TGGHVFPGLAVAHHLMAQ--GWQVRWLGTADRMEADLVP---KHGIE-IDFIRISGLRGKGIKALIAAPLRIFNAWRQAR 89 (196)
T ss_dssp SHHHHHHHHHHHHHHHTT--TCEEEEEECTTSTHHHHGG---GGTCE-EEECCCCCCTTCCHHHHHTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHC--CCEEEEEECCCHHHHHHHH---HCCCE-EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 468799999999999978--8979999788706554444---42970-89984578677778999986999999999999
Q ss_pred HHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEE
Q ss_conf 98612686499996113588861289999998579613324433
Q gi|254780368|r 103 EIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNI 146 (249)
Q Consensus 103 ~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i 146 (249)
..+++.+||+|.+- .......+.+.+..++.|.+......
T Consensus 90 ~~l~~~kpDiI~~~----~~~~~~~~~~~~~~~~ip~v~~~h~~ 129 (196)
T 1f0k_A 90 AIMKAYKPDVVLGM----GGYVSGPGGLAAWSLGIPVVLHEQNG 129 (196)
T ss_dssp HHHHHHCCSEEEEC----SSTTHHHHHHHHHHTTCCEEEEECSS
T ss_pred HHHHCCCCCEEEEC----CCCCHHHHHHHHHHCCCCEEEEECCC
T ss_conf 99750299789978----97341999999986699889982687
No 30
>>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} (A:1-176,A:349-376)
Probab=76.55 E-value=5.4 Score=19.78 Aligned_cols=85 Identities=16% Similarity=0.105 Sum_probs=52.2
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEE--ECCCCCCHHHHHHHH---HHHHHCCCCCEEEEEECCCCCCCEE
Q ss_conf 59985289999714101588888785077762376--336547889999999---9986126864999961135888612
Q gi|254780368|r 52 KGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILI--ESNETLEPLSIAKIL---REIVKKENPIIVIAGKQTTDNESNQ 126 (249)
Q Consensus 52 ~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i--~d~~~~D~~~~A~~L---a~~i~~~~~DLIl~G~~S~D~~~g~ 126 (249)
+..+-++.++.-|.- .+..+....-.|......+ ..+...-...++.++ ..++++..||+||+ -.|..+..
T Consensus 30 ~~~~~e~~lv~TGqH-~~~~~~~~~~~~i~~d~~l~~~~~~~sl~~~~~~~i~~~~~~l~~~~PD~VlV---~GDt~~~l 105 (204)
T 1v4v_A 30 GIPGLKPLVLLTGQH-REQLRQALSLFGIQEDRNLDVXQERQALPDLAARILPQAARALKEXGADYVLV---HGDTLTTF 105 (204)
T ss_dssp TSTTEEEEEEECSSC-HHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHHHHHHHHHHHHTTCSEEEE---ESSCHHHH
T ss_pred CCCCCCEEEEEECCC-HHHHHCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE---CCCCCCCH
T ss_conf 189998899990687-45664712240888765678789888899999999998776654047652310---13664311
Q ss_pred HHHHHHHHHCCCCE
Q ss_conf 89999998579613
Q gi|254780368|r 127 TGQMLAALMRWPQA 140 (249)
Q Consensus 127 v~~~lA~~Lg~p~v 140 (249)
.+++.|.++++|.+
T Consensus 106 A~AlaA~~~~IPva 119 (204)
T 1v4v_A 106 AVAWAAFLEGIPVG 119 (204)
T ss_dssp HHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHH
T ss_conf 36788987634451
No 31
>>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase, transferase; 1.60A {Burkholderia pseudomallei 1710B} PDB: 3gwe_A (A:1-41,A:77-203)
Probab=76.24 E-value=2.7 Score=21.65 Aligned_cols=52 Identities=15% Similarity=0.115 Sum_probs=38.9
Q ss_pred HHHHHHHHHCC-----CCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEEEC
Q ss_conf 99999986126-----86499996113588861289999998579613324433432
Q gi|254780368|r 98 AKILREIVKKE-----NPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIKII 149 (249)
Q Consensus 98 A~~La~~i~~~-----~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~~~ 149 (249)
+.++-+++++. +.|+|++|..+.+........+++.+||++.-..+..+...
T Consensus 50 ~~A~~~aL~~agi~p~dID~iv~gs~t~~~~~~~~a~~ia~~lGl~~~~~~~~i~~a 106 (168)
T 3gwa_A 50 YEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTHAGALDVNLG 106 (168)
T ss_dssp HHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCCTTSEEEEEECS
T ss_pred HHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEEHHH
T ss_conf 999999999759791206758984102566663366777765303565077661213
No 32
>>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide mutase); acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} (A:)
Probab=75.37 E-value=5.8 Score=19.58 Aligned_cols=105 Identities=18% Similarity=0.152 Sum_probs=61.0
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHH----HHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 6013689999999985599852899997141015888887----850777623763365478899999999986126864
Q gi|254780368|r 36 NPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNS----LAMGADRGILIESNETLEPLSIAKILREIVKKENPI 111 (249)
Q Consensus 36 n~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~a----lAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~~D 111 (249)
-.|++.+-.......+......|.+ -+|..+..+..+++ =.+|..--+.+.. +-..+.-+.+ +.+-.+..+++
T Consensus 2 ~~y~~~~~~~~~~~~~~~~~~~V~I-i~gs~SD~~~~~~a~~~l~~~gi~~~~~v~s-ahr~p~~l~~-~~~~~~~~~~~ 78 (182)
T 1u11_A 2 SETAPLPSASSALEDKAASAPVVGI-IMGSQSDWETMRHADALLTELEIPHETLIVS-AHRTPDRLAD-YARTAAERGLN 78 (182)
T ss_dssp ------------------CCCSEEE-EESSGGGHHHHHHHHHHHHHTTCCEEEEECC-TTTCHHHHHH-HHHHTTTTTCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEE-EECCHHHHHHHHHHHHHHHHCCCCEEEEEEH-HHHCHHHHHH-HHHHHHHCCCE
T ss_conf 9888899976322356789996999-9586756999999999999839965999734-6538589999-99999966974
Q ss_pred EEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEE
Q ss_conf 999961135888612899999985796133244334
Q gi|254780368|r 112 IVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIK 147 (249)
Q Consensus 112 LIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~ 147 (249)
+|+++. |.++++|+.+|.+-.+|-+..=....
T Consensus 79 viIa~A----G~~a~L~gvva~~t~~PVIgvP~~~g 110 (182)
T 1u11_A 79 VIIAGA----GGAAHLPGMCAAWTRLPVLGVPVESR 110 (182)
T ss_dssp EEEEEE----ESSCCHHHHHHHHCSSCEEEEEECCT
T ss_pred EEEEEE----CCCCCCCCCEEEECCCEEEEEECCCC
T ss_conf 899861----58887766134313652799733455
No 33
>>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} (A:1-191,A:370-394)
Probab=71.32 E-value=7.2 Score=18.97 Aligned_cols=87 Identities=18% Similarity=0.119 Sum_probs=53.2
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECC---------CCCCHHHHHHHHHHHH
Q ss_conf 2601368999999998559985289999714101588888785077762376336---------5478899999999986
Q gi|254780368|r 35 MNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESN---------ETLEPLSIAKILREIV 105 (249)
Q Consensus 35 in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~---------~~~D~~~~A~~La~~i 105 (249)
.+-...+..+.+-+|.+. |-+|++++.+.+...... ...+.+..- ...-.+.....|...+
T Consensus 26 ~GG~~~~~~~la~~L~~~--G~eV~vit~~~~~~~~~~--------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~i 95 (216)
T 2jjm_A 26 VGGSGVVGTELGKQLAER--GHEIHFITSGLPFRLNKV--------YPNIYFHEVTVNQYSVFQYPPYDLALASKMAEVA 95 (216)
T ss_dssp -CHHHHHHHHHHHHHHHT--TCEEEEECSSCC----CC--------CTTEEEECCCCC----CCSCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHC--CCEEEEEECCCCCCCCCC--------CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 996999999999999977--998999947998642113--------7970699704566661015603589999999998
Q ss_pred HCCCCCEEEEEECCCCCCCEEHHHHHHHHH
Q ss_conf 126864999961135888612899999985
Q gi|254780368|r 106 KKENPIIVIAGKQTTDNESNQTGQMLAALM 135 (249)
Q Consensus 106 ~~~~~DLIl~G~~S~D~~~g~v~~~lA~~L 135 (249)
++.+||+|.|-. ......++.++..+
T Consensus 96 ~~~~~DiIh~h~----~~~~~~~~~l~~~~ 121 (216)
T 2jjm_A 96 QRENLDILHVHY----AIPHAICAYLAKQM 121 (216)
T ss_dssp HHHTCSEEEECS----STTHHHHHHHHHHH
T ss_pred HHHCCCEEEECC----CCCHHHHHHHHHHH
T ss_conf 870984898324----33116899999875
No 34
>>1to6_A Glycerate kinase; glycerate metabolism, structural genomics T831, PSI, protein structure initiative; 2.50A {Neisseria meningitidis serogroup A} (A:1-50,A:262-371)
Probab=70.88 E-value=7.3 Score=18.90 Aligned_cols=59 Identities=12% Similarity=0.115 Sum_probs=41.2
Q ss_pred CCCHHHHHHHHHHHHH---C-CCCCEEEEEECCCCCC--CEEHHHHHHHH--HCCCCEEEEEEEEEC
Q ss_conf 4788999999999861---2-6864999961135888--61289999998--579613324433432
Q gi|254780368|r 91 TLEPLSIAKILREIVK---K-ENPIIVIAGKQTTDNE--SNQTGQMLAAL--MRWPQATFVSNIKII 149 (249)
Q Consensus 91 ~~D~~~~A~~La~~i~---~-~~~DLIl~G~~S~D~~--~g~v~~~lA~~--Lg~p~vt~v~~i~~~ 149 (249)
|.-++.=+..+++.+. + .+.|||++|....|.. .|-+|..+|.+ -|.|.+..+-+++.+
T Consensus 45 GEGt~eG~d~V~~~~~l~~~l~~ADlVITGEGr~D~QTl~GKvp~gVa~~Ak~~~Pviai~G~v~~~ 111 (160)
T 1to6_A 45 GEGTVDGIDTCLDLIDFDKKVSDVDLVIVGEGRLDRQSLAGKAPIGVAKRTPVGVPVVAICGSLVED 111 (160)
T ss_dssp STTHHHHHHHHHHHTTHHHHTTTCSEEEECCSEECSTTTTTCHHHHHHTTSCTTCCEEEEESEECTT
T ss_pred CCCHHHCHHHHHHHHCHHHHHCCCCEEEECCCCCCHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 5249996999998858997836899899789855242017677999999977799889997756788
No 35
>>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* (A:1-234,A:444-499)
Probab=66.92 E-value=8.9 Score=18.38 Aligned_cols=131 Identities=11% Similarity=-0.102 Sum_probs=74.9
Q ss_pred CEEEEEEEEECCCCCCEEECCCCCEEEECCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHC-
Q ss_conf 9699986030388760598078881632487733260136899999999855998528999971410158888878507-
Q gi|254780368|r 1 MKILVPIKGVINYNTKVRIKNDYSGIETENTKISMNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMG- 79 (249)
Q Consensus 1 M~I~V~vK~VpD~~~~i~i~~~~~~i~~~~~~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmG- 79 (249)
|||+.+-...|.... .....-...++-...+..+.|-.|.++ |-+|++++-+++.............
T Consensus 8 mrIl~vs~~~~~~~~----------~~~~~~~P~~GG~~~~~~~La~~L~~~--Gh~V~Vit~~~~~~~~~~~~~~~~~~ 75 (290)
T 2r60_A 8 KHVAFLNPQGNFDPA----------DSYWTEHPDFGGQLVYVKEVSLALAEM--GVQVDIITRRIKDENWPEFSGEIDYY 75 (290)
T ss_dssp CEEEEECCSSCCCTT----------CTTTTSBTTBSHHHHHHHHHHHHHHHT--TCEEEEEEECCCBTTBGGGCCSEEEC
T ss_pred CEEEEECCCCCCCCC----------CCCCCCCCCCCCHHHHHHHHHHHHHHC--CCEEEEEECCCCCCCCCCCCCCCCEE
T ss_conf 359998687666743----------446588959898999999999999966--99699994568888875456764236
Q ss_pred -CCC---CEEEECC--CC---------CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEE
Q ss_conf -776---2376336--54---------78899999999986126864999961135888612899999985796133244
Q gi|254780368|r 80 -ADR---GILIESN--ET---------LEPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVS 144 (249)
Q Consensus 80 -aD~---ai~i~d~--~~---------~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~ 144 (249)
... ..++... .. .........+....+...+|+|.+- +...+..+..++..+|+|.+..+.
T Consensus 76 ~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~----~~~~~~~a~~~ar~~~iP~V~t~H 151 (290)
T 2r60_A 76 QETNKVRIVRIPFGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTH----YGDGGLAGVLLKNIKGLPFTFTGH 151 (290)
T ss_dssp TTCSSEEEEEECCSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEE----HHHHHHHHHHHHHHHCCCEEEECS
T ss_pred ECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC----CCHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 4259669999467864566788888999999999999999728997399978----742777888877632998899924
Q ss_pred EEE
Q ss_conf 334
Q gi|254780368|r 145 NIK 147 (249)
Q Consensus 145 ~i~ 147 (249)
.+.
T Consensus 152 ~~~ 154 (290)
T 2r60_A 152 SLG 154 (290)
T ss_dssp SCH
T ss_pred CCC
T ss_conf 644
No 36
>>1q74_A 1D-MYO-inosityl 2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase (MSHB); rossmann fold, zinc aminohydrolase; HET: PE4; 1.70A {Mycobacterium tuberculosis} (A:)
Probab=65.51 E-value=9.4 Score=18.21 Aligned_cols=64 Identities=16% Similarity=0.242 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHCCCCCEEEECCC-------------------CCCHHHHHHHHHHHHHCCCCCEEEE-EECCCCC--CCE
Q ss_conf 15888887850777623763365-------------------4788999999999861268649999-6113588--861
Q gi|254780368|r 68 VEEVLKNSLAMGADRGILIESNE-------------------TLEPLSIAKILREIVKKENPIIVIA-GKQTTDN--ESN 125 (249)
Q Consensus 68 ~~~~Lr~alAmGaD~ai~i~d~~-------------------~~D~~~~A~~La~~i~~~~~DLIl~-G~~S~D~--~~g 125 (249)
..+..+-+-.+|++...++.-.. ..|.......|...|++..+|+|+| .-...|+ |+.
T Consensus 69 ~~E~~~a~~~LGv~~~~~l~~~d~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~PdvV~t~~p~g~~~H~DH~ 148 (303)
T 1q74_A 69 IGELTAALRALGVSAPIYLGGAGRWRDSGMAGTDQRSQRRFVDADPRQTVGALVAIIRELRPHVVVTYDPNGGYGHPDHV 148 (303)
T ss_dssp HHHHHHHHHHTTCCCCEETTSTTSSBCCCCC----CCSCBGGGSCHHHHHHHHHHHHHHHCCSEEEEECTTTTTCCHHHH
T ss_pred HHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHH
T ss_conf 99999999754677258836885323345567764321024317999999999999997068669985798898998988
Q ss_pred EHHHHH
Q ss_conf 289999
Q gi|254780368|r 126 QTGQML 131 (249)
Q Consensus 126 ~v~~~l 131 (249)
.+.-.+
T Consensus 149 ~~~~~~ 154 (303)
T 1q74_A 149 HTHTVT 154 (303)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999999
No 37
>>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} (A:786-1226)
Probab=64.54 E-value=9.8 Score=18.09 Aligned_cols=32 Identities=19% Similarity=0.196 Sum_probs=17.4
Q ss_pred CEEEEEECCCHHHHHHHHHHHHCCCCCEEEECC
Q ss_conf 289999714101588888785077762376336
Q gi|254780368|r 57 EVIVVSIGSCKVEEVLKNSLAMGADRGILIESN 89 (249)
Q Consensus 57 ~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~ 89 (249)
.+..+.+|.....+..+.+...|+|- |.|+..
T Consensus 245 ~~~~~~~g~~~~~~~a~~~~~~G~D~-I~v~g~ 276 (441)
T 1ofd_A 245 QVSVKLVAEIGIGTIAAGVAKANADI-IQISGH 276 (441)
T ss_dssp EEEEEEECSTTHHHHHHHHHHTTCSE-EEEECT
T ss_pred CEEEEEEEECCCCEEEEEEECCCCCE-EEEECC
T ss_conf 56999844167508998530378998-999378
No 38
>>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp} (A:)
Probab=63.84 E-value=10 Score=18.01 Aligned_cols=74 Identities=12% Similarity=0.098 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEE
Q ss_conf 1588888785077762376336547889999999998612686499996113588861289999998579613324
Q gi|254780368|r 68 VEEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFV 143 (249)
Q Consensus 68 ~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v 143 (249)
..+.|++.+.....+-+.|.-..|.|+..++..+..... ....++++......++.+-.-.+|+.||+++...-
T Consensus 16 ~~~~i~~~~~~~~~~kv~V~lSGG~DS~~ll~l~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~a~~lgi~~~~i~ 89 (249)
T 3fiu_A 16 LVNWLSDSCMNYPAEGFVIGLSGGIDSAVAASLAVKTGL--PTTALILPSDNNQHQDMQDALELIEMLNIEHYTIS 89 (249)
T ss_dssp HHHHHHHHHHTTTCSEEEEECCSSHHHHHHHHHHHHTTS--CEEEEECCCTTSCHHHHHHHHHHHHHHTCEEEECC
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCC--CCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 999999999983998399977799899999999998298--63210025664047789999999862454431145
No 39
>>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infectious diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2} (A:1-47,A:281-383)
Probab=63.72 E-value=10 Score=17.99 Aligned_cols=76 Identities=18% Similarity=0.209 Sum_probs=48.9
Q ss_pred CCHHHHHHHHHHHHHCC--------------------CCCEEEEEECCCCCCCEE--HHHHHHHH---HCCCCEEEEEEE
Q ss_conf 78899999999986126--------------------864999961135888612--89999998---579613324433
Q gi|254780368|r 92 LEPLSIAKILREIVKKE--------------------NPIIVIAGKQTTDNESNQ--TGQMLAAL---MRWPQATFVSNI 146 (249)
Q Consensus 92 ~D~~~~A~~La~~i~~~--------------------~~DLIl~G~~S~D~~~g~--v~~~lA~~---Lg~p~vt~v~~i 146 (249)
+.+...+.++++.+++. +.|||++|+...|..|-+ +|..+|.+ .|.|++..+-.+
T Consensus 17 lsa~ev~~ai~~gi~~~~p~~~v~~~P~ADGl~~~i~~ADLVITGEG~~D~QTl~GKvp~gVa~~A~~~~vPviaiaG~v 96 (150)
T 3cwc_A 17 LSALEVATAIEQGFREIWPDADYLKLPLADGLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGSL 96 (150)
T ss_dssp CCHHHHHHHHHHHHHTTCTTSEEEECCCCCSHHHHHHHCSEEEECCEESCC----CHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 69999999999999986999889994147587988605999997875357745588538999999998598999996886
Q ss_pred EECCCEEEEEEECCCCEEEEEECCCEEEEEECC
Q ss_conf 432865999983589679999639889998435
Q gi|254780368|r 147 KIIDNHAIVTREVGHGTMTMETPLPAVITVDLN 179 (249)
Q Consensus 147 ~~~~~~~~v~r~~e~g~e~v~~~lPavisv~~~ 179 (249)
+.+-+.+ .+...-+++++...
T Consensus 97 ~~~~~~~------------~~~gi~av~~i~~~ 117 (150)
T 3cwc_A 97 TADVSVV------------HEHGLDAVFSVIYT 117 (150)
T ss_dssp C--------------------CCCSEEEEEECC
T ss_pred CCCHHHH------------HHCCCEEEEECCCC
T ss_conf 7785788------------85495099876889
No 40
>>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} (A:523-662)
Probab=63.42 E-value=4.3 Score=20.42 Aligned_cols=80 Identities=31% Similarity=0.317 Sum_probs=53.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 60136899999999855998528999971410158888878507776237633654788999999999861268649999
Q gi|254780368|r 36 NPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKKENPIIVIA 115 (249)
Q Consensus 36 n~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~~DLIl~ 115 (249)
.+||..+......||+. |-+++.+.--|...... -| +.|+--.+|+ |...+...++++++|-|++
T Consensus 54 ~EfDy~~~~~~~~Lk~~--G~~tiliN~NPeTVstd--------~~----~~D~~Yfepl-t~E~V~~Ii~~E~p~~vi~ 118 (140)
T 1a9x_A 54 IEFDYCCVHASLALRED--GYETIMVNCNPETVSTD--------YD----TSDRLYFEPV-TLEDVLEIVRIEKPKGVIV 118 (140)
T ss_dssp HHHHHHHHHHHHHHHHT--TCEEEEECCCTTSSTTS--------TT----SSSEEECCCC-SHHHHHHHHHHHCCSEEEC
T ss_pred CCCCHHHHHHHHHHHHC--CCEEEEEECCCCCCCCC--------CC----CCCCEEEECC-CHHHHHHHHHHHCCCEEEE
T ss_conf 45443589999999866--98689971685210058--------01----3663577338-5999999998648874799
Q ss_pred EECCCCCCCEEHHHHHHHHHC
Q ss_conf 611358886128999999857
Q gi|254780368|r 116 GKQTTDNESNQTGQMLAALMR 136 (249)
Q Consensus 116 G~~S~D~~~g~v~~~lA~~Lg 136 (249)
.-.||++..++..|.
T Consensus 119 ------~~GGq~~~~l~~~L~ 133 (140)
T 1a9x_A 119 ------QYGGQTPLKLARALE 133 (140)
T ss_dssp ------SSSTHHHHTTHHHHH
T ss_pred ------EECCCHHHHHHHHHH
T ss_conf ------732543779999998
No 41
>>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} (A:)
Probab=59.21 E-value=12 Score=17.49 Aligned_cols=79 Identities=18% Similarity=0.195 Sum_probs=51.7
Q ss_pred CCEEEEEECCCH------HHHHHHHHH-HHCCCC--CEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEE
Q ss_conf 528999971410------158888878-507776--23763365478899999999986126864999961135888612
Q gi|254780368|r 56 TEVIVVSIGSCK------VEEVLKNSL-AMGADR--GILIESNETLEPLSIAKILREIVKKENPIIVIAGKQTTDNESNQ 126 (249)
Q Consensus 56 ~~V~~lsvG~~~------~~~~Lr~al-AmGaD~--ai~i~d~~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~ 126 (249)
-+|.++++|.+. ....|...| ..|.+- ...+.| |.-.+..+|..++++.++|+|+|--.+.-+..-.
T Consensus 14 ~rv~ii~~GdE~G~~~d~n~~~l~~~l~~~G~~v~~~~~v~D----d~~~i~~~i~~~~~~~~~dlVittGG~g~~~~D~ 89 (169)
T 1y5e_A 14 VRCKIVTISDTRTEETDKSGQLLHELLKEAGHKVTSYEIVKD----DKESIQQAVLAGYHKEDVDVVLTNGGTGITKRDV 89 (169)
T ss_dssp CEEEEEEECSSCCTTTCHHHHHHHHHHHHHTCEEEEEEEECS----SHHHHHHHHHHHHTCTTCSEEEEECCCSSSTTCC
T ss_pred CEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECC----CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC
T ss_conf 669999971888877584099999999977995678656358----7999999999875256675899843555554333
Q ss_pred HHHHHHHHHCCC
Q ss_conf 899999985796
Q gi|254780368|r 127 TGQMLAALMRWP 138 (249)
Q Consensus 127 v~~~lA~~Lg~p 138 (249)
++..++...+.+
T Consensus 90 t~~~~~~~~~~~ 101 (169)
T 1y5e_A 90 TIEAVSALLDKE 101 (169)
T ss_dssp HHHHHHTTCSEE
T ss_pred CHHHHHHCCCCC
T ss_conf 246654111323
No 42
>>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A* (A:202-364)
Probab=56.95 E-value=10 Score=18.00 Aligned_cols=52 Identities=19% Similarity=0.244 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEE
Q ss_conf 88999999999861268649999611358886128999999857961332443
Q gi|254780368|r 93 EPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSN 145 (249)
Q Consensus 93 D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~ 145 (249)
++.++. .+++.+++-.-=+|++|.+..-.+....--.+|+.+|+|.++....
T Consensus 13 ~~~~i~-~~~~~l~~a~rP~ii~G~~~~~~~a~~~l~~lae~~~~Pv~~t~~~ 64 (163)
T 2vbf_A 13 EQVILS-KIEESLKNAQKPVVIAGHEVISFGLEKTVTQFVSETKLPITTLNFG 64 (163)
T ss_dssp HHHHHH-HHHHHHHHCSSEEEEECHHHHHTTCHHHHHHHHHHHCCCEEECSTT
T ss_pred HHHHHH-HHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 025899-9999997335517874112333104667777764147874234543
No 43
>>2nrt_A Uvrabc system protein C; UVRC, endonuclease, RNAse H, helix hairpin helix, NER, hydrolase; 1.50A {Thermotoga maritima} PDB: 2nrv_A 2nrw_A 2nrx_A 2nrz_A (A:1-156)
Probab=56.60 E-value=13 Score=17.21 Aligned_cols=60 Identities=20% Similarity=0.253 Sum_probs=45.1
Q ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHCCC-CCEEEEEECCCCCCCEEHHHHHHHHHC----CCCEEEEEE
Q ss_conf 76237633654788999999999861268-649999611358886128999999857----961332443
Q gi|254780368|r 81 DRGILIESNETLEPLSIAKILREIVKKEN-PIIVIAGKQTTDNESNQTGQMLAALMR----WPQATFVSN 145 (249)
Q Consensus 81 D~ai~i~d~~~~D~~~~A~~La~~i~~~~-~DLIl~G~~S~D~~~g~v~~~lA~~Lg----~p~vt~v~~ 145 (249)
-|-+.+....+-|.-+...++..-.+... ||||+. ||+-||+......+-. +|.++.+.+
T Consensus 55 YR~f~i~~~~~dDy~~m~evl~Rr~~~~~~PDLilI-----DGG~gQl~~a~~vl~~l~~~ipv~glaK~ 119 (156)
T 2nrt_A 55 YRRYKIEQDHPDDYESIRTVVKRRYSKHPLPNLLFV-----DGGIGQVNAAIEALKEIGKDCPVVGLAKK 119 (156)
T ss_dssp CEEEEEECSSCCHHHHHHHHHHHHHTTSCCCSEEEE-----SSSHHHHHHHHHHHHHTTCCCCEEEECTT
T ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE-----CCCHHHHHHHHHHHHHHHCCCHHHHCCCC
T ss_conf 888602667623899999999986125899759998-----59799999999998865202015430244
No 44
>>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} (A:187-366)
Probab=56.58 E-value=13 Score=17.21 Aligned_cols=52 Identities=12% Similarity=0.150 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEE
Q ss_conf 88999999999861268649999611358886128999999857961332443
Q gi|254780368|r 93 EPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSN 145 (249)
Q Consensus 93 D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~ 145 (249)
|+-.+ ..++..+++-.-=+|++|.+....+...---.+|+.+|+|.++.-..
T Consensus 7 ~~~~i-~~~~~~L~~A~rPvii~G~~~~~~~a~~~l~~lae~~g~Pv~~t~~~ 58 (180)
T 1ozh_A 7 PDDAI-DQVAKLIAQAKNPIFLLGLMASQPENSKALRRLLETSHIPVTSTYQA 58 (180)
T ss_dssp CHHHH-HHHHHHHHHCSSEEEEECGGGGSGGGHHHHHHHHHHHCCCEEECGGG
T ss_pred CHHHH-HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCC
T ss_conf 98999-99999997543986457876545166899999998608971102323
No 45
>>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus} (A:184-348)
Probab=56.22 E-value=14 Score=17.17 Aligned_cols=46 Identities=9% Similarity=0.169 Sum_probs=34.4
Q ss_pred HHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEE
Q ss_conf 9999861268649999611358886128999999857961332443
Q gi|254780368|r 100 ILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSN 145 (249)
Q Consensus 100 ~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~ 145 (249)
.+++.+++-.-=+|++|......+.+..--.+|+.+|+|.++.-..
T Consensus 18 ~~~~~L~~A~rP~ii~G~~~~~~~a~~~l~~lae~~g~pv~~t~~~ 63 (165)
T 2vbi_A 18 ATVALLEKSASPVMLLGSKLRAANALAATETLADKLQCAVTIMAAA 63 (165)
T ss_dssp HHHHHHHTCSCEEEEECTTTTTTTCHHHHHHHHHHHCCEEEEEGGG
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
T ss_conf 9999998623245323222333322223222124321035530234
No 46
>>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix} (A:1-10,A:35-178)
Probab=55.91 E-value=14 Score=17.14 Aligned_cols=49 Identities=14% Similarity=0.042 Sum_probs=37.5
Q ss_pred CHHHHHHHHHHHHHCCC--CCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEE
Q ss_conf 88999999999861268--649999611358886128999999857961332443
Q gi|254780368|r 93 EPLSIAKILREIVKKEN--PIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSN 145 (249)
Q Consensus 93 D~~~~A~~La~~i~~~~--~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~ 145 (249)
+-...++.|++.+++.+ +|+|++ .+.++-..+..+|..||.|+...-..
T Consensus 16 ~~~~~~~~la~~i~~~~~~~dviig----~~~gg~~~a~~la~~L~~p~~~~rk~ 66 (154)
T 2yzk_A 16 SYSVALDLLLEVGGQDLARSSAVIG----VATGGLPWAAXLALRLSKPLGYVRPE 66 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSEEEE----ETTTTHHHHHHHHHHHTCCEEEECCC
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEE----EEEEEEEEHHHHHHHHHHHHCCCHHC
T ss_conf 9999999999875423446765665----24546750145555455431211001
No 47
>>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate assisted catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* (A:1-222,A:411-438)
Probab=55.79 E-value=14 Score=17.12 Aligned_cols=104 Identities=15% Similarity=0.092 Sum_probs=64.7
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCC--EEEECCC-----------CCCHHHHHHHH
Q ss_conf 2601368999999998559985289999714101588888785077762--3763365-----------47889999999
Q gi|254780368|r 35 MNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRG--ILIESNE-----------TLEPLSIAKIL 101 (249)
Q Consensus 35 in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~a--i~i~d~~-----------~~D~~~~A~~L 101 (249)
.+-...+..+.+-.|.++ |-+|++++.+.......... +.+.. +.+.... ..-.......+
T Consensus 41 ~GG~~~~~~~l~~~L~~~--G~~V~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (250)
T 3c48_A 41 SGGMNVYILSTATELAKQ--GIEVDIYTRATRPSQGEIVR----VAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLS 114 (250)
T ss_dssp --CHHHHHHHHHHHHHHT--TCEEEEEEECCCGGGCSEEE----EETTEEEEEECCSCSSSCCGGGGGGGHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHC--CCEEEEEECCCCCCCCCCEE----CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 678999999999999977--99699994589887633011----269728998047762334476657888653278999
Q ss_pred HHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEEE
Q ss_conf 99861268649999611358886128999999857961332443343
Q gi|254780368|r 102 REIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIKI 148 (249)
Q Consensus 102 a~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~~ 148 (249)
...+++..||+|.|-. ...+..+...+..++.|.+..+.....
T Consensus 115 ~~~~~~~~~Diih~~~----~~~~~~~~~~~~~~~~p~v~~~h~~~~ 157 (250)
T 3c48_A 115 FTRREKVTYDLIHSHY----WLSGQVGWLLRDLWRIPLIHTAHTLAA 157 (250)
T ss_dssp HHHHHTCCCSEEEEEH----HHHHHHHHHHHHHHTCCEEEECSSCHH
T ss_pred HHHHCCCCCEEEEECC----CCHHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 9984279955999877----422789988765048852542145443
No 48
>>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} (A:1-20,A:55-323)
Probab=55.65 E-value=14 Score=17.11 Aligned_cols=76 Identities=5% Similarity=0.100 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHCC--CCCCEEEEEECCC---H--HHHHHHHHHHHCCCCCEEEECCCCCCH-HHHHHHHHHHHHCCCCC
Q ss_conf 68999999998559--9852899997141---0--158888878507776237633654788-99999999986126864
Q gi|254780368|r 40 EIALEESLQLREKG--IATEVIVVSIGSC---K--VEEVLKNSLAMGADRGILIESNETLEP-LSIAKILREIVKKENPI 111 (249)
Q Consensus 40 ~~AlE~Al~lke~~--~g~~V~~lsvG~~---~--~~~~Lr~alAmGaD~ai~i~d~~~~D~-~~~A~~La~~i~~~~~D 111 (249)
+-+.+.+-+.-++. .-.+|..+-+|.. . ...+-+-+...|......+....+.-+ .......+..++...++
T Consensus 26 ~La~~Aa~~AL~~aGi~~~dID~vi~~s~~~~~~~~~~a~~va~~lG~~~~~~~~v~~~c~s~~~Al~~aa~~i~sG~~~ 105 (289)
T 3il3_A 26 TMGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNIDDAISFDLAAAXTGFVYALSVADQFIRAGKVK 105 (289)
T ss_dssp HHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTCSSCEEEEECCGGGHHHHHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 99999999988752556443126873032444331056777776327884410102212221789999999998649864
Q ss_pred EEEE
Q ss_conf 9999
Q gi|254780368|r 112 IVIA 115 (249)
Q Consensus 112 LIl~ 115 (249)
.+++
T Consensus 106 ~vlv 109 (289)
T 3il3_A 106 KALV 109 (289)
T ss_dssp EEEE
T ss_pred EEEE
T ss_conf 1467
No 49
>>3d0r_A Protein CALG3; calicheamicin synthesis, glycosyltransferase, enediyne antibiotic; HET: PE4; 1.90A {Micromonospora echinospora} PDB: 3d0q_A* (A:1-222,A:384-398)
Probab=55.62 E-value=14 Score=17.11 Aligned_cols=42 Identities=14% Similarity=0.121 Sum_probs=30.1
Q ss_pred HHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEE
Q ss_conf 999999861268649999611358886128999999857961332443
Q gi|254780368|r 98 AKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSN 145 (249)
Q Consensus 98 A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~ 145 (249)
...+-..++...+|+|++.- ...-+..+|+.||+|++.....
T Consensus 119 ~~~l~~~~~~~~~d~vI~D~------~~~~~~~vA~~lgiP~v~~~~~ 160 (237)
T 3d0r_A 119 VDGTMALVDDYRPDLVVYEQ------GATVGLLAADRAGVPAVQRNQS 160 (237)
T ss_dssp HHHHHHHHHHHCCSEEEEET------TCHHHHHHHHHHTCCEEEECCS
T ss_pred CCCEEEHHCCCCCCEEEEEC------CCEEEEEECCCCCCCHHHCCHH
T ss_conf 46601201056786589844------8645554124458834430457
No 50
>>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} (A:1-180)
Probab=54.43 E-value=15 Score=16.98 Aligned_cols=34 Identities=18% Similarity=0.006 Sum_probs=29.6
Q ss_pred CCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCE
Q ss_conf 2686499996113588861289999998579613
Q gi|254780368|r 107 KENPIIVIAGKQTTDNESNQTGQMLAALMRWPQA 140 (249)
Q Consensus 107 ~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~v 140 (249)
....|++++|..+.|...+....+++..||.+.+
T Consensus 80 ~~~Id~vi~~~~~~~~~~~~~a~~v~~~~g~~~~ 113 (180)
T 1u6e_A 80 AADIDGVIVTTNTHFLQTPPAAPMVAASLGAKGI 113 (180)
T ss_dssp GGGCCEEEEECSCCCCSSSCHHHHHHHHHTCTTS
T ss_pred CCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCC
T ss_conf 4114368996534665686277654432046632
No 51
>>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} (A:523-742,A:762-821)
Probab=54.30 E-value=15 Score=16.97 Aligned_cols=42 Identities=12% Similarity=0.116 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHCCCCCCEE-EEEECCCHHHHHHHHHHHHCCCC
Q ss_conf 68999999998559985289-99971410158888878507776
Q gi|254780368|r 40 EIALEESLQLREKGIATEVI-VVSIGSCKVEEVLKNSLAMGADR 82 (249)
Q Consensus 40 ~~AlE~Al~lke~~~g~~V~-~lsvG~~~~~~~Lr~alAmGaD~ 82 (249)
++.+|--.++++.. +..+. -+.+|..+..+..+.+...|+|-
T Consensus 167 ~~~~e~i~~v~~~~-~~pv~vk~r~~~~d~~e~a~~l~e~Gvd~ 209 (280)
T 1gte_A 167 ELVRNICRWVRQAV-QIPFFAKLTPNVTDIVSIARAAKEGGADG 209 (280)
T ss_dssp HHHHHHHHHHHHHC-SSCEEEEECSCSSCHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHHCC-CCCEEEEECCCHHHHHHHHHHHHHCCCCE
T ss_conf 99999999986178-99879997998278999999999859969
No 52
>>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} (A:1-185,A:357-384)
Probab=53.76 E-value=15 Score=16.92 Aligned_cols=85 Identities=15% Similarity=0.077 Sum_probs=52.9
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECC-CC-CCHHHHHHH---HHHHHHCCCCCEEEEEECCCCCCCEE
Q ss_conf 59985289999714101588888785077762376336-54-788999999---99986126864999961135888612
Q gi|254780368|r 52 KGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESN-ET-LEPLSIAKI---LREIVKKENPIIVIAGKQTTDNESNQ 126 (249)
Q Consensus 52 ~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~-~~-~D~~~~A~~---La~~i~~~~~DLIl~G~~S~D~~~g~ 126 (249)
+..+-++.+++-|. ......+.-...|.....-+.-. .+ .-...++.+ +..++++..||+||+ -.|.++..
T Consensus 25 ~~~~~~~~v~~tg~-h~~~~~~~i~~dg~~~~~~~~l~~~~~~~~~~~~~~i~~l~~vl~~~kPDlVlV---~GD~~~~l 100 (213)
T 1vgv_A 25 KDPFFEAKVCVTAQ-HREXLDQVLKLFSIVPDYDLNIXQPGQGLTEITCRILEGLKPILAEFKPDVVLV---HGDTTTTL 100 (213)
T ss_dssp HSTTCEEEEEECCS-SGGGGHHHHHHHTCCCSEECCCCSTTSCHHHHHHHHHHHHHHHHHHHCCSEEEE---ETTCHHHH
T ss_pred HCCCCCEEEEEECC-CHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE---ECCCCCHH
T ss_conf 38998779999188-989999999861878774523589999999999999986488897446654032---03653113
Q ss_pred HHHHHHHHHCCCCE
Q ss_conf 89999998579613
Q gi|254780368|r 127 TGQMLAALMRWPQA 140 (249)
Q Consensus 127 v~~~lA~~Lg~p~v 140 (249)
.+++.|..+++|.+
T Consensus 101 a~AlaA~~~~IPVa 114 (213)
T 1vgv_A 101 ATSLAAFYQRIPVG 114 (213)
T ss_dssp HHHHHHHTTTCCEE
T ss_pred HHHHHHHHHCCEEE
T ss_conf 48999874164389
No 53
>>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, enzyme, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli} (A:205-389,A:582-616)
Probab=53.21 E-value=14 Score=17.14 Aligned_cols=51 Identities=18% Similarity=0.217 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEE
Q ss_conf 8899999999986126864999961135888612899999985796133244
Q gi|254780368|r 93 EPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVS 144 (249)
Q Consensus 93 D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~ 144 (249)
|..++.++ ++.+++-.-=+|++|......+...--..+|+.+|+|.++...
T Consensus 8 ~~~~i~~~-~~~L~~AkrPvIi~G~g~~~~~a~~~l~~Lae~lgiPV~~t~~ 58 (220)
T 2pan_A 8 SRXQIEKA-VEXLIQAERPVIVAGGGVINADAAALLQQFAELTSVPVIPTLX 58 (220)
T ss_dssp CHHHHHHH-HHHHHTCSSEEEEECHHHHHTTCHHHHHHHHHHHTCCEEECTT
T ss_pred CHHHHHHH-HHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 00689999-9999738982899777501130899999999720787323435
No 54
>>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} (A:181-349)
Probab=52.93 E-value=11 Score=17.67 Aligned_cols=45 Identities=9% Similarity=0.001 Sum_probs=30.8
Q ss_pred HHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEE
Q ss_conf 999861268649999611358886128999999857961332443
Q gi|254780368|r 101 LREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSN 145 (249)
Q Consensus 101 La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~ 145 (249)
+++.+++-.-=+|++|......+...---.+++.||+|.++.-..
T Consensus 22 ~~~~L~~AkrPvii~G~~~~~~~~~~~l~~lae~~g~pv~~t~~~ 66 (169)
T 1ovm_A 22 AENKLAMSKRTALLADFLVLRHGLKHALQKWVKEVPMAHATMLMG 66 (169)
T ss_dssp HHHHHHTCSCEEEEECHHHHHTTCHHHHHHHHHHSCCEEEECGGG
T ss_pred HHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEECCCC
T ss_conf 999998558868995762123533699999998669961222333
No 55
>>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} (A:194-372)
Probab=52.27 E-value=11 Score=17.73 Aligned_cols=52 Identities=13% Similarity=0.180 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEE
Q ss_conf 88999999999861268649999611358886128999999857961332443
Q gi|254780368|r 93 EPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSN 145 (249)
Q Consensus 93 D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~ 145 (249)
|.-.+++ +++.+++-..=+|++|....-.+..+---.+|+.||+|.++....
T Consensus 6 ~~~~i~~-~~~~L~~A~rPvIi~G~~~~~~~a~~~l~~lae~~giPv~~~~~~ 57 (179)
T 2c31_A 6 AEDAIAR-AADLIKNAKRPVIMLGKGAAYAQCDDEIRALVEETGIPFLPMGMA 57 (179)
T ss_dssp CHHHHHH-HHHHHHTCSSEEEEECHHHHHHTCHHHHHHHHHHHTCCEEECGGG
T ss_pred CHHHHHH-HHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 9999999-999986168958999623113447899988787418651222012
No 56
>>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken structural genomics/proteomics initiative, RSGI; 2.00A {Aeropyrum pernix} (A:)
Probab=52.24 E-value=15 Score=16.89 Aligned_cols=15 Identities=20% Similarity=0.206 Sum_probs=6.8
Q ss_pred HHHHHHHCCCCCEEE
Q ss_conf 888785077762376
Q gi|254780368|r 72 LKNSLAMGADRGILI 86 (249)
Q Consensus 72 Lr~alAmGaD~ai~i 86 (249)
.+..+..|+|.....
T Consensus 94 ~~~~~~~~~~~~~~~ 108 (234)
T 1n7k_A 94 AQTVLEAGATELDVV 108 (234)
T ss_dssp HHHHHHHTCCEEEEC
T ss_pred HHHHHHCCCCEEEEE
T ss_conf 999998699879996
No 57
>>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, infectious diseases, isomerase; 2.35A {Vibrio cholerae} (A:1-196,A:382-396)
Probab=51.28 E-value=16 Score=16.67 Aligned_cols=85 Identities=12% Similarity=0.070 Sum_probs=53.1
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECC--CCCCHHHHHH---HHHHHHHCCCCCEEEEEECCCCCCCEE
Q ss_conf 59985289999714101588888785077762376336--5478899999---999986126864999961135888612
Q gi|254780368|r 52 KGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESN--ETLEPLSIAK---ILREIVKKENPIIVIAGKQTTDNESNQ 126 (249)
Q Consensus 52 ~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~--~~~D~~~~A~---~La~~i~~~~~DLIl~G~~S~D~~~g~ 126 (249)
+..+-++.++.-|. ..+..-..--..|....+.+.-. .+.....++. .+...++...||+||. -.|.++..
T Consensus 50 ~~~~~~~~lv~TGq-H~~~~~~~i~~~g~~~~~~~~l~~~~~s~~~~~~~~~~~l~~~l~~~~PD~VlV---~GD~~~~L 125 (211)
T 3dzc_A 50 QDNRFVAKVCVTGQ-HREMLDQVLELFSITPDFDLNIMEPGQTLNGVTSKILLGMQQVLSSEQPDVVLV---HGDTATTF 125 (211)
T ss_dssp HCTTEEEEEEECCS-SSHHHHHHHHHTTCCCSEECCCCCTTCCHHHHHHHHHHHHHHHHHHHCCSEEEE---ETTSHHHH
T ss_pred HCCCCCEEEEEECC-CHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC---CCCCCCCH
T ss_conf 28998779999089-989999999845978872010388998899999999999999898626764540---01465421
Q ss_pred HHHHHHHHHCCCCE
Q ss_conf 89999998579613
Q gi|254780368|r 127 TGQMLAALMRWPQA 140 (249)
Q Consensus 127 v~~~lA~~Lg~p~v 140 (249)
.+++.|.++++|.+
T Consensus 126 a~AlaA~~~~IPva 139 (211)
T 3dzc_A 126 AASLAAYYQQIPVG 139 (211)
T ss_dssp HHHHHHHTTTCCEE
T ss_pred HHHHHHHHCCCCEE
T ss_conf 37777650355326
No 58
>>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiamine diphosphate; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A* (A:192-368)
Probab=50.15 E-value=12 Score=17.62 Aligned_cols=46 Identities=11% Similarity=0.141 Sum_probs=33.4
Q ss_pred HHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEE
Q ss_conf 9999861268649999611358886128999999857961332443
Q gi|254780368|r 100 ILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSN 145 (249)
Q Consensus 100 ~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~ 145 (249)
.+++.+++-.-=+|++|......+....--.+|+.||+|.++....
T Consensus 12 ~~~~~L~~A~rPvii~G~~~~~~~a~~~l~~lae~~g~Pv~~~~~~ 57 (177)
T 2q28_A 12 SAISLLAKAERPLIILGKGAAYSQADEQLREFIESAQIPFLPMSMA 57 (177)
T ss_dssp HHHHHHHHCSSEEEEECHHHHHHTCHHHHHHHHHHHTCCEEECGGG
T ss_pred HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 9998765336987999535333257999999975325875221111
No 59
>>3c3w_A Two component transcriptional regulatory protein DEVR; response regulator, two-component regulatory system, DNA- binding protein; 2.20A {Mycobacterium tuberculosis} (A:1-99,A:196-225)
Probab=48.90 E-value=10 Score=18.01 Aligned_cols=46 Identities=15% Similarity=0.210 Sum_probs=29.1
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCC
Q ss_conf 260136899999999855998528999971410158888878507776
Q gi|254780368|r 35 MNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADR 82 (249)
Q Consensus 35 in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ 82 (249)
++--+.+.++..-+||+......++++|. ....+...+|+..||.+
T Consensus 55 i~LP~~dGleli~~Ik~~~p~~~IIvlS~--~~~~~~~~~Al~aGAs~ 100 (129)
T 3c3w_A 55 VRLPDGNGIELCRDLLSRMPDLRCLILTS--YTSDEAMLDAILAGASR 100 (129)
T ss_dssp SEETTEEHHHHHHHHHHHCTTCEEEEGGG--SSSHHHHHHHHHHTCCS
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCCCCCCC--CCCHHHHHHHHHCCCCC
T ss_conf 56899996314332222045644444434--54679999999728879
No 60
>>2nrr_A Uvrabc system protein C; UVRC, endonuclase, NER, hydrolase; 1.20A {Thermotoga maritima} (A:)
Probab=48.73 E-value=18 Score=16.41 Aligned_cols=97 Identities=19% Similarity=0.224 Sum_probs=60.0
Q ss_pred EEECCCCEECCCHHHHHHHHHHHHHHCCCC--CCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHH
Q ss_conf 632487733260136899999999855998--528999971410158888878507776237633654788999999999
Q gi|254780368|r 26 IETENTKISMNPFDEIALEESLQLREKGIA--TEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNETLEPLSIAKILRE 103 (249)
Q Consensus 26 i~~~~~~~~in~~D~~AlE~Al~lke~~~g--~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~ 103 (249)
+..+..+..|-.||-.-+ ++.. +..++..-|.+.-. .-|-+.+....+-|.-+...+|..
T Consensus 11 L~l~~~p~rIE~fDiSh~--------~G~~~V~s~Vvf~~G~~~k~----------~YR~f~i~~~~~dDy~~m~evl~R 72 (159)
T 2nrr_A 11 LNMKDFPYRIEGIDISHL--------QGKYTVASLVVFEDGFPKKG----------DYRRYKIEQDHPDDYESIRTVVKR 72 (159)
T ss_dssp TTCSSCCCEEEEEEEECC-----------CCEEEEEEEETTEECGG----------GCEEEEC-----CHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEEECCCC--------CCCCCEEEEEECCCCCCCHH----------HHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 099999884899978764--------78773578885258885467----------898845256776399999999998
Q ss_pred HHHCCC-CCEEEEEECCCCCCCEEHHHHHHHHHC----CCCEEEEEE
Q ss_conf 861268-649999611358886128999999857----961332443
Q gi|254780368|r 104 IVKKEN-PIIVIAGKQTTDNESNQTGQMLAALMR----WPQATFVSN 145 (249)
Q Consensus 104 ~i~~~~-~DLIl~G~~S~D~~~g~v~~~lA~~Lg----~p~vt~v~~ 145 (249)
-.++.. ||||+. ||+-||+......+-. +|.++.+.+
T Consensus 73 R~~~~~~PDLilI-----DGGkgQl~~a~~~l~~l~~~i~v~glaK~ 114 (159)
T 2nrr_A 73 RYSKHPLPNLLFV-----DGGIGQVNAAIEALKEIGKDCPVVGLAKK 114 (159)
T ss_dssp HHTTSCCCSEEEE-----SSCHHHHHHHHHHHHHTTCCCCEEEEC--
T ss_pred HHCCCCCCEEEEE-----CCCHHHHHHHHHHHHHHHHCCCHHCCCCC
T ss_conf 7326898748997-----59799999999999985302430003454
No 61
>>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii OT3} (A:1-126)
Probab=48.47 E-value=18 Score=16.39 Aligned_cols=57 Identities=18% Similarity=0.141 Sum_probs=38.9
Q ss_pred CCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECC---CCCCHHHHHHHHHHHHHCCCC
Q ss_conf 985289999714101588888785077762376336---547889999999998612686
Q gi|254780368|r 54 IATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESN---ETLEPLSIAKILREIVKKENP 110 (249)
Q Consensus 54 ~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~---~~~D~~~~A~~La~~i~~~~~ 110 (249)
..-.++++.+.|....+.++++.++|...++.+..- .+.+...-..-+..+.++.+.
T Consensus 63 ~~~D~v~i~~p~~~~~~~v~e~~~~gi~~ii~~~~g~~e~~~~~~~~~~~~~~~a~~~g~ 122 (126)
T 2csu_A 63 DEIDLAIIVVPKRFVKDTLIQCGEKGVKGVVIITAGFGETGEEGKREEKELVEIAHKYGX 122 (126)
T ss_dssp SCCSEEEECSCHHHHHHHHHHHHHHTCCEEEECCCSSTTSCHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 998989999778998999999998499889971677665454106899999998862697
No 62
>>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A* (A:186-350)
Probab=47.88 E-value=17 Score=16.51 Aligned_cols=46 Identities=11% Similarity=0.164 Sum_probs=30.8
Q ss_pred HHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEE
Q ss_conf 9999861268649999611358886128999999857961332443
Q gi|254780368|r 100 ILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSN 145 (249)
Q Consensus 100 ~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~ 145 (249)
.+++.+++-.-=+|++|......+....--.+|+.+|||.++.-..
T Consensus 18 ~~~~~L~~A~rPvi~~G~~~~~~~a~~~l~~lae~~~~pv~~t~~~ 63 (165)
T 2vk8_A 18 TILVLDKDAKNPVILADACCSRHDVKAETKKLIDLTQFPAFVTPMG 63 (165)
T ss_dssp HHHHHHHHCSSEEEEECHHHHHTTCHHHHHHHHHHHCCCEEECTTT
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 9999987456985024886430249999999998648981214100
No 63
>>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3d7k_A* (A:182-367)
Probab=47.02 E-value=14 Score=17.11 Aligned_cols=54 Identities=9% Similarity=0.201 Sum_probs=37.6
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEE
Q ss_conf 7889999999998612686499996113588861289999998579613324433
Q gi|254780368|r 92 LEPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNI 146 (249)
Q Consensus 92 ~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i 146 (249)
.++-++.+ +++.+++-.-=+|++|......+...---.+|+.||+|.++.-..-
T Consensus 8 ~~~~~i~~-~~~~L~~A~rP~ii~G~~~~~~~a~~~l~~lae~lg~Pv~~t~~~~ 61 (186)
T 2uz1_A 8 PDPADLDQ-ALALLRKAERPVIVLGSEASRTARKTALSAFVAATGVPVFADYEGL 61 (186)
T ss_dssp CCHHHHHH-HHHHHHHCSSEEEEECHHHHHHTCHHHHHHHHHHHCCCEEECGGGG
T ss_pred CCHHHHHH-HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 45779999-9999972889879983242210268999999997197422220001
No 64
>>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open active site loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A* (A:199-361)
Probab=46.92 E-value=18 Score=16.42 Aligned_cols=40 Identities=10% Similarity=0.062 Sum_probs=20.2
Q ss_pred HHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEE
Q ss_conf 6126864999961135888612899999985796133244
Q gi|254780368|r 105 VKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVS 144 (249)
Q Consensus 105 i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~ 144 (249)
+++-.-=+|++|......+...---.+|+.+|||.++.-.
T Consensus 21 L~~A~rPvii~G~~~~~~~a~~~l~~lae~~g~pv~~t~~ 60 (163)
T 2nxw_A 21 MRSATSPVLMVCVEVRRYGLEAKVAELAQRLGVPVVTTFM 60 (163)
T ss_dssp HHHCSSEEEEECHHHHHTTCHHHHHHHHHHHCSCEEECGG
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCC
T ss_conf 8750112221001134433343100002333432233421
No 65
>>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* (A:1-414)
Probab=46.84 E-value=19 Score=16.23 Aligned_cols=78 Identities=14% Similarity=0.026 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHCC--CCCCEEEEEECCCHH-------HHHHHHHHH-HCCCCCEEEECCCCCCHHHHHHHHHHH-HHCC
Q ss_conf 68999999998559--985289999714101-------588888785-077762376336547889999999998-6126
Q gi|254780368|r 40 EIALEESLQLREKG--IATEVIVVSIGSCKV-------EEVLKNSLA-MGADRGILIESNETLEPLSIAKILREI-VKKE 108 (249)
Q Consensus 40 ~~AlE~Al~lke~~--~g~~V~~lsvG~~~~-------~~~Lr~alA-mGaD~ai~i~d~~~~D~~~~A~~La~~-i~~~ 108 (249)
.-|.++|.++-++. .-.++..|-++.... ...+...|. -|+..+-...-..+.-.+.+|-.+|.. ++..
T Consensus 54 ~la~~Aa~~aL~~agl~p~dId~lI~at~~~~~~~p~~a~~v~~~Lg~~g~~~~~~~di~~~C~~~~~aL~~A~~li~sg 133 (414)
T 2f82_A 54 SMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCVNWVESN 133 (414)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHHTTTCCCCBCCEECSGGGHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHC
T ss_conf 99999999999975999899999999938988777766999999997438987541211254310489999999998743
Q ss_pred C--CCEEEEEE
Q ss_conf 8--64999961
Q gi|254780368|r 109 N--PIIVIAGK 117 (249)
Q Consensus 109 ~--~DLIl~G~ 117 (249)
. .-||+++.
T Consensus 134 ~~~~alVv~~e 144 (414)
T 2f82_A 134 SWDGRYGLVIC 144 (414)
T ss_dssp TCCSCEEEEEE
T ss_pred CCCCCEEEECC
T ss_conf 55665787523
No 66
>>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis} (A:)
Probab=46.26 E-value=20 Score=16.17 Aligned_cols=68 Identities=16% Similarity=0.179 Sum_probs=41.7
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCC
Q ss_conf 26013689999999985599852899997141015888887850777623763365478899999999986126
Q gi|254780368|r 35 MNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKKE 108 (249)
Q Consensus 35 in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~ 108 (249)
+|-.+...+|..-+|+.......|.++|.. .......+++..|++. |+. ....+-....+|..+.+..
T Consensus 69 ~~lp~~dG~~~~~~ir~~~~~~~vivlt~~--~~~~~~~~a~~~Ga~~-yl~---Kp~~~~~L~~ai~~~~~g~ 136 (152)
T 3eul_A 69 YRMPGMDGAQVAAAVRSYELPTRVLLISAH--DEPAIVYQALQQGAAG-FLL---KDSTRTEIVKAVLDCAKGR 136 (152)
T ss_dssp TTCSSSCHHHHHHHHHHTTCSCEEEEEESC--CCHHHHHHHHHTTCSE-EEE---TTCCHHHHHHHHHHHHHCC
T ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEEEECC--CCHHHHHHHHHCCCCE-EEE---CCCCHHHHHHHHHHHHCCC
T ss_conf 899997589999999974999839999676--9999999999869988-997---9899999999999998799
No 67
>>3cf4_G Acetyl-COA decarbonylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductase; 2.00A {Methanosarcina barkeri} (G:)
Probab=46.23 E-value=18 Score=16.34 Aligned_cols=45 Identities=18% Similarity=0.164 Sum_probs=32.5
Q ss_pred HHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEE
Q ss_conf 999861268649999611358886128999999857961332443
Q gi|254780368|r 101 LREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSN 145 (249)
Q Consensus 101 La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~ 145 (249)
++..+++-.-=+|++|......+...---.+|+.+|+|.++....
T Consensus 27 ~~~~L~~AkrPvii~G~~~~~~~~~~~l~~lae~~g~Pv~~t~~g 71 (170)
T 3cf4_G 27 AAKIISKAKRPLLMVGTLALDPELLDRVVKISKAANIPIAATGSS 71 (170)
T ss_dssp HHHHHHHCSSEEEEECSTTCCHHHHHHHHHHHHHHTCCEEECTTT
T ss_pred HHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEECHHH
T ss_conf 999999669988996888643268999999999849788987222
No 68
>>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} (A:)
Probab=46.15 E-value=20 Score=16.16 Aligned_cols=109 Identities=14% Similarity=0.021 Sum_probs=65.0
Q ss_pred CEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHH--HHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 73326013689999999985599852899997141015888887--8507776237633654788999999999861268
Q gi|254780368|r 32 KISMNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNS--LAMGADRGILIESNETLEPLSIAKILREIVKKEN 109 (249)
Q Consensus 32 ~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~a--lAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~ 109 (249)
++-.|..+..+++.+.++.+......+.+++-.+-..-...|.. +..|+-..+.- + ....|+.+-++.++..|
T Consensus 14 K~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~ipi~~qd~~~~--~---~~~~tg~~s~~~l~~~G 88 (225)
T 1hg3_A 14 KTYIEATGKRALEIAKAAEKVYKETGVTIVVAPQLVDLRMIAESVEIPVFAQHIDPI--K---PGSHTGHVLPEAVKEAG 88 (225)
T ss_dssp TBCGGGSHHHHHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHSCSSCBEESCCCSC--C---SBSCTTCCCHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCEEEEECCCCC--C---CCCCHHHCCHHHHHHCC
T ss_conf 437597899999999998742344794699928788899997265854886227777--7---87725246799997479
Q ss_pred CCEEEEEECCCCCCCEEHHHHHHHHH--CCCCEEEEEE
Q ss_conf 64999961135888612899999985--7961332443
Q gi|254780368|r 110 PIIVIAGKQTTDNESNQTGQMLAALM--RWPQATFVSN 145 (249)
Q Consensus 110 ~DLIl~G~~S~D~~~g~v~~~lA~~L--g~p~vt~v~~ 145 (249)
.|.|+.|..--....+.....++..+ |+..+-.+..
T Consensus 89 a~~vll~hse~r~~~~e~~~~~~~~~~~gl~~iv~v~~ 126 (225)
T 1hg3_A 89 AVGTLLNHSENRMILADLEAAIRRAEEVGLMTMVCSNN 126 (225)
T ss_dssp CCEEEESCGGGCCBHHHHHHHHHHHHHHTCEEEEEESS
T ss_pred CEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEECC
T ss_conf 81999646201332551389999999879958999797
No 69
>>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Wolinella succinogenes} (A:)
Probab=45.91 E-value=20 Score=16.13 Aligned_cols=98 Identities=13% Similarity=0.079 Sum_probs=50.8
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHH---------------------HHHHHHHHHHCCCCCEEEECC--CC
Q ss_conf 2601368999999998559985289999714101---------------------588888785077762376336--54
Q gi|254780368|r 35 MNPFDEIALEESLQLREKGIATEVIVVSIGSCKV---------------------EEVLKNSLAMGADRGILIESN--ET 91 (249)
Q Consensus 35 in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~---------------------~~~Lr~alAmGaD~ai~i~d~--~~ 91 (249)
-++..++|+..|+.+--+..+++++++++=++.. +..+......-.+..+..... .+
T Consensus 10 ~s~~s~~a~~~a~~~~a~~~~~~i~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~g 89 (138)
T 3idf_A 10 DTEACERAAQYILDMFGKDADCTLTLIHVKPEFMLYGEAVLAAYDEIEMKEEEKAKLLTQKFSTFFTEKGINPFVVIKEG 89 (138)
T ss_dssp SSHHHHHHHHHHHHHHTTCTTEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEES
T ss_pred CCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf 99899999999999985526987988898247675643345675889999999999999999999987799689999946
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHH---HHHHHHCCC
Q ss_conf 78899999999986126864999961135888612899---999985796
Q gi|254780368|r 92 LEPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQ---MLAALMRWP 138 (249)
Q Consensus 92 ~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~---~lA~~Lg~p 138 (249)
++. ..|.+.+ .++|||++|.+.-..-...+|+ .+......|
T Consensus 90 -~~~---~~i~~~a--~~~DliViG~~~~~~~~~~~Gs~~~~v~~~a~~p 133 (138)
T 3idf_A 90 -EPV---EMVLEEA--KDYNLLIIGSSENSFLNKIFASHQDDFIQKAPIP 133 (138)
T ss_dssp -CHH---HHHHHHH--TTCSEEEEECCTTSTTSSCCCCTTCHHHHHCSSC
T ss_pred -CHH---HHHHHHC--CCCEEEEEECCCCCCCCCEECCHHHHHHHCCCCC
T ss_conf -736---8877530--3530599966999963343176999999728998
No 70
>>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} (A:187-356)
Probab=44.44 E-value=21 Score=15.99 Aligned_cols=48 Identities=13% Similarity=0.135 Sum_probs=33.8
Q ss_pred HHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEE
Q ss_conf 999999861268649999611358886128999999857961332443
Q gi|254780368|r 98 AKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSN 145 (249)
Q Consensus 98 A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~ 145 (249)
...+++.+++-.-=+|++|......+...---.+|+.+|+|.++.-..
T Consensus 20 i~~~~~~L~~A~rPvii~G~~~~~~~a~~~l~~lae~~~~pv~~t~~~ 67 (170)
T 2iht_A 20 ADQAAALLAEAKHPVLVVGAAAIRSGAVPAIRALAERLNIPVITTYIA 67 (170)
T ss_dssp HHHHHHHHHHCSSEEEEECHHHHHTTCHHHHHHHHHHHTCCEEECSTT
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECC
T ss_conf 899999998564652013212234323799999999979898973146
No 71
>>2ywx_A Phosphoribosylaminoimidazole carboxylase catalytic subunit; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii} (A:)
Probab=43.10 E-value=22 Score=15.86 Aligned_cols=83 Identities=18% Similarity=0.248 Sum_probs=55.8
Q ss_pred EEEEEECCCHHHHHHHHHH----HHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHH
Q ss_conf 8999971410158888878----507776237633654788999999999861268649999611358886128999999
Q gi|254780368|r 58 VIVVSIGSCKVEEVLKNSL----AMGADRGILIESNETLEPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAA 133 (249)
Q Consensus 58 V~~lsvG~~~~~~~Lr~al----AmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~ 133 (249)
++++-||..+..+..+++. .+|..--+.|.. ..-+-..+.++.+....+.++++. +.++++|+.+|.
T Consensus 1 lV~IimGS~SD~~~~~~a~~~L~~~gi~~e~~V~S-----aHR~p~~l~~~~~~~~~~viIa~A----G~aa~Lpgvva~ 71 (157)
T 2ywx_A 1 MICIIMGSESDLKIAEKAVNILKEFGVEFEVRVAS-----AHRTPELVEEIVKNSKADVFIAIA----GLAAHLPGVVAS 71 (157)
T ss_dssp CEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECC-----TTTCHHHHHHHHHHCCCSEEEEEE----ESSCCHHHHHHT
T ss_pred CEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEC-----CCCCHHHHHHHHHHHHHCEEEEEE----ECCCCCCCHHHH
T ss_conf 98999886734999999999999849976974321-----457999999998751115178751----055556421566
Q ss_pred HHCCCCEEEEEEEEEC
Q ss_conf 8579613324433432
Q gi|254780368|r 134 LMRWPQATFVSNIKII 149 (249)
Q Consensus 134 ~Lg~p~vt~v~~i~~~ 149 (249)
.-.+|-+..-..-...
T Consensus 72 ~t~~PVIgvP~~~~~~ 87 (157)
T 2ywx_A 72 LTTKPVIAVPVDAKLD 87 (157)
T ss_dssp TCSSCEEEEEECSSGG
T ss_pred HCCCCEEEECCCCCCC
T ss_conf 4465457304566541
No 72
>>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha JMP134} (A:1-161)
Probab=42.16 E-value=23 Score=15.77 Aligned_cols=132 Identities=12% Similarity=0.025 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECC-CCCCHHHHHHHHHHHHHCCCCCEEEE-E-
Q ss_conf 68999999998559985289999714101588888785077762376336-54788999999999861268649999-6-
Q gi|254780368|r 40 EIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESN-ETLEPLSIAKILREIVKKENPIIVIA-G- 116 (249)
Q Consensus 40 ~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~-~~~D~~~~A~~La~~i~~~~~DLIl~-G- 116 (249)
+.+++..-.+-... +.+...+.-| ........+.+..-.+..+.+.+. +..-+.....-+...++..++|.|+. |
T Consensus 21 ~g~~~~l~~~l~~~-~~~~~liv~~-~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~v~~~~~~~~~~~~d~IiaiGG 98 (161)
T 3jzd_A 21 AGSSSQVAAEVERL-GAKRALVLCT-PNQQAEAERIADLLGPLSAGVYAGAVXHVPIESARDATARAREAGADCAVAVGG 98 (161)
T ss_dssp TTGGGGHHHHHHHT-TCSCEEEECC-GGGHHHHHHHHHHHGGGEEEEECCCCTTCBHHHHHHHHHHHHHHTCSEEEEEES
T ss_pred CCHHHHHHHHHHHC-CCCEEEEEEC-CCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEECCC
T ss_conf 59999999999973-9986999981-765504999999861377189945213989899999998753148978984278
Q ss_pred ECCCCCCCEEHHHHHHHHHCCCCEEEEEEEEECC-CEEEEEEECCCCEEEEE--ECCCEEEEEECC
Q ss_conf 1135888612899999985796133244334328-65999983589679999--639889998435
Q gi|254780368|r 117 KQTTDNESNQTGQMLAALMRWPQATFVSNIKIID-NHAIVTREVGHGTMTME--TPLPAVITVDLN 179 (249)
Q Consensus 117 ~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~~~~-~~~~v~r~~e~g~e~v~--~~lPavisv~~~ 179 (249)
-...| +.-.+|.+.++|++..-+...-.. ....+... ++....+. ...|..+-++.+
T Consensus 99 Gs~~D-----~aK~~a~~~~~p~i~vpT~~s~~~~s~~av~~~-~~~k~~~~~~~~~P~~vi~D~~ 158 (161)
T 3jzd_A 99 GSTTG-----LGKAIALETGXPIVAIPTTYAGSEVTPVYGLTE-AGTKRTGRDPRVLPRTVIYDPA 158 (161)
T ss_dssp HHHHH-----HHHHHHHHHCCCEEEEECSSCCGGGCSEEEEEE-TTEEEEEECGGGSCSEEEECGG
T ss_pred CCCCC-----HHHHHHHCCCCEEEEECCCCCCCCCCCCHHHCC-CCCCCCCCCCCCCCCEEEEEEE
T ss_conf 55443-----443101121220576413124664552010013-5653011454334652456540
No 73
>>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} (A:)
Probab=41.26 E-value=23 Score=15.68 Aligned_cols=27 Identities=11% Similarity=0.190 Sum_probs=9.8
Q ss_pred CEEEEEECCCCCCCEEHHHHHHHHHCC
Q ss_conf 499996113588861289999998579
Q gi|254780368|r 111 IIVIAGKQTTDNESNQTGQMLAALMRW 137 (249)
Q Consensus 111 DLIl~G~~S~D~~~g~v~~~lA~~Lg~ 137 (249)
|+|++|..|.+.....++..+..+||+
T Consensus 72 d~li~~T~t~~~~~ps~a~~i~~~Lgl 98 (396)
T 1xpm_A 72 GMVIVATESAVDAAKAAAVQIHNLLGI 98 (396)
T ss_dssp EEEEEECSSCSBSSSCHHHHHHHHTTC
T ss_pred CEEEEEECCCCCCCCHHHHHHHHHHHH
T ss_conf 999998157566662046888987654
No 74
>>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling, bifunctional enzyme; HET: NAD; 1.70A {Pseudomonas SP} (A:1-273)
Probab=41.21 E-value=23 Score=15.68 Aligned_cols=102 Identities=14% Similarity=0.092 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEEEECCC---HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 3689999999985599852899997141---0158888878507776237633654788999999999861268649999
Q gi|254780368|r 39 DEIALEESLQLREKGIATEVIVVSIGSC---KVEEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKKENPIIVIA 115 (249)
Q Consensus 39 D~~AlE~Al~lke~~~g~~V~~lsvG~~---~~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~~DLIl~ 115 (249)
=+.+.+..-..|+.+....+.+...+.. ...+..+.+..+|+|..++...-..+.|..+...+....++...++.+
T Consensus 119 ~~~~~~~i~~ak~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~li~~l~~~~~~~i~l- 197 (273)
T 1nvm_A 119 ADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAVLKPETQV- 197 (273)
T ss_dssp GGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHHSCTTSEE-
T ss_pred HHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC-
T ss_conf 6768899999997274302344024566523445788888860863110254202468799999999999862775540-
Q ss_pred EECC-CCCCCEEHHHHHHHHHCCCCEE
Q ss_conf 6113-5888612899999985796133
Q gi|254780368|r 116 GKQT-TDNESNQTGQMLAALMRWPQAT 141 (249)
Q Consensus 116 G~~S-~D~~~g~v~~~lA~~Lg~p~vt 141 (249)
|-+. -|.+.+.--.+.|-..|..++.
T Consensus 198 ~~H~Hnd~GlA~aN~l~Ai~aGa~~vd 224 (273)
T 1nvm_A 198 GMHAHHNLSLGVANSIVAVEEGCDRVD 224 (273)
T ss_dssp EEECBCTTSCHHHHHHHHHHTTCCEEE
T ss_pred EEEECCCCCHHHHHHHHHHHHCCCEEE
T ss_conf 477358888399999999980988998
No 75
>>1ta9_A Glycerol dehydrogenase; oxidoreductase; 1.90A {Schizosaccharomyces pombe} (A:1-219)
Probab=41.06 E-value=23 Score=15.66 Aligned_cols=104 Identities=13% Similarity=0.065 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCC-CCCHHHHHHHHHHHHHCCCCCEEEE-E
Q ss_conf 3689999999985599852899997141015888887850777623763365-4788999999999861268649999-6
Q gi|254780368|r 39 DEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNE-TLEPLSIAKILREIVKKENPIIVIA-G 116 (249)
Q Consensus 39 D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~-~~D~~~~A~~La~~i~~~~~DLIl~-G 116 (249)
-..++++...+.... +.+-..+..++...+..+.+....=-+..+.+.+.- +--+.....-.....+..++|.|+. |
T Consensus 75 g~g~~~~~~~~l~~~-~~~~~~ivtd~~~~~~~~~~i~~~l~~~~~~v~~~v~~~~~~~~v~~~~~~~~~~~~d~iIaiG 153 (219)
T 1ta9_A 75 GRHAFTRSYMYVKKW-ATKSAVVLADQNVWNICANKIVDSLSQNGMTVTKLVFGGEASLVELDKLRKQCPDDTQVIIGVG 153 (219)
T ss_dssp ETTGGGGHHHHHTTT-CSSEEEEEEEHHHHHHTHHHHHHHHHHTTCEEEEEEECSCCCHHHHHHHHTTSCTTCCEEEEEE
T ss_pred ECCHHHHHHHHHHHC-CCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 059999999999972-9996999989668899999999999876997999983899899999999997513899899957
Q ss_pred ECCCCCCCEEHHHHHHHHHCCCCEEEEEEEE
Q ss_conf 1135888612899999985796133244334
Q gi|254780368|r 117 KQTTDNESNQTGQMLAALMRWPQATFVSNIK 147 (249)
Q Consensus 117 ~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~ 147 (249)
-.| ..-++-.+|.+.+.|+++.=+--.
T Consensus 154 GGs----v~D~aK~~a~~~~~p~i~iPTta~ 180 (219)
T 1ta9_A 154 GGK----TMDSAKYIAHSMNLPSIICPTTAS 180 (219)
T ss_dssp SHH----HHHHHHHHHHHTTCCEEEEESSCS
T ss_pred CCH----HHHHHHCCCCCCCCEEEEEECCCC
T ss_conf 953----765210122455520355412344
No 76
>>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3} (A:)
Probab=39.50 E-value=25 Score=15.51 Aligned_cols=67 Identities=19% Similarity=0.296 Sum_probs=48.1
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHC
Q ss_conf 2601368999999998559985289999714101588888785077762376336547889999999998612
Q gi|254780368|r 35 MNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKK 107 (249)
Q Consensus 35 in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~ 107 (249)
+|-.|...+|..-+|+..+....|.++|.- ...+...+|+..||+. |+. .+.++-....++..+++.
T Consensus 58 ~~lP~~~G~~~~~~ir~~~~~~~iivlt~~--~~~~~~~~a~~~Ga~~-yl~---Kp~~~~~l~~~i~~~~~g 124 (154)
T 2qsj_A 58 VNLPDAEAIDGLVRLKRFDPSNAVALISGE--TDHELIRAALEAGADG-FIP---KSADPQVLIHAVSLILEG 124 (154)
T ss_dssp C------CHHHHHHHHHHCTTSEEEEC-------CHHHHHHHHTTCCB-BCC---TTSCHHHHHHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCEEEEEEE--CCHHHHHHHHHCCCCE-EEE---CCCCHHHHHHHHHHHHCC
T ss_conf 788999868999999986899939999845--8799999999869978-997---999999999999999879
No 77
>>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei 1710B} (A:23-169)
Probab=38.76 E-value=25 Score=15.43 Aligned_cols=74 Identities=8% Similarity=0.054 Sum_probs=48.5
Q ss_pred HHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCC---CCCEEEEEECCC---CCCCEEHHHHHHHHHCCCCEEE
Q ss_conf 5888887850777623763365478899999999986126---864999961135---8886128999999857961332
Q gi|254780368|r 69 EEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKKE---NPIIVIAGKQTT---DNESNQTGQMLAALMRWPQATF 142 (249)
Q Consensus 69 ~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~---~~DLIl~G~~S~---D~~~g~v~~~lA~~Lg~p~vt~ 142 (249)
...||+.+...-.+.+.|.-..|.|+..++.++..+.++. .+++-....... ..++-.....+|+.||+|+...
T Consensus 12 ~~~i~~~~~~~~~~~vvv~lSGG~DSsv~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~lgv~~~~~ 91 (147)
T 3dpi_A 12 IGFVADYLRTAGLRACVLGISGGIDSSTAGRLAQLAVERLRASGYDARFVAMRLPYGAQHDEADARRALAFVRADETLTV 91 (147)
T ss_dssp HHHHHHHHHHHTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSCC---CHHHHHHHHHHCCSEEEEC
T ss_pred HHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHH
T ss_conf 99999999981999589968888889999999999877634677664799983677777678899999987433212220
No 78
>>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP} (A:)
Probab=38.61 E-value=26 Score=15.42 Aligned_cols=50 Identities=10% Similarity=0.167 Sum_probs=37.6
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 26013689999999985599852899997141015888887850777623763
Q gi|254780368|r 35 MNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIE 87 (249)
Q Consensus 35 in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~ 87 (249)
+|-.+...+|..-+||+......|+++|.- ...+...+|+..||+. |+..
T Consensus 59 ~~mp~~~G~~~l~~ir~~~~~~~vIils~~--~~~~~~~~a~~~Ga~~-yl~K 108 (153)
T 3cz5_A 59 LTLPGPGGIEATRHIRQWDGAARILIFTMH--QGSAFALKAFEAGASG-YVTK 108 (153)
T ss_dssp SCCSSSCHHHHHHHHHHHCTTCCEEEEESC--CSHHHHHHHHHTTCSE-EEET
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCEEEEEEE--CCHHHHHHHHHCCCCC-EEEC
T ss_conf 336898789999999975899969999825--8999999999869983-8968
No 79
>>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A* (A:1-46,A:238-314,A:434-489)
Probab=37.89 E-value=26 Score=15.35 Aligned_cols=75 Identities=9% Similarity=0.054 Sum_probs=54.6
Q ss_pred HHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHC---CCCEEEEEEEEECCCEEEEEEECCCCEEEEEECCCEEEE
Q ss_conf 99999861268649999611358886128999999857---961332443343286599998358967999963988999
Q gi|254780368|r 99 KILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMR---WPQATFVSNIKIIDNHAIVTREVGHGTMTMETPLPAVIT 175 (249)
Q Consensus 99 ~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg---~p~vt~v~~i~~~~~~~~v~r~~e~g~e~v~~~lPavis 175 (249)
-..|..+.+.|++..+.- ..|.-..+++-.+++.|+ +-.=+.|.+++-.++.++++-+..++.++++.+. ++++
T Consensus 24 ~~~a~~l~~~g~~v~~~~--~~~~~ld~i~k~l~k~L~k~~I~l~~~Vt~I~~~~~~V~Vt~~~gg~~~t~~aD~-VI~a 100 (179)
T 2jae_A 24 LCSAFELQKAGYKVTVLE--ARTRPMDRIYYAFQDRIGTDNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADY-AICT 100 (179)
T ss_dssp HHHHHHHHHTTCEEEEEC--SSSSSTTHHHHHHHHHHCGGGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESE-EEEC
T ss_pred HHHHHHHHHCCCCEEEEE--CCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCEECCCCCCEEECCCCCCCCCCCCC-CCCC
T ss_conf 999999985899889993--8998823546654322100001025543211002543101211687653100122-2125
Q ss_pred E
Q ss_conf 8
Q gi|254780368|r 176 V 176 (249)
Q Consensus 176 v 176 (249)
+
T Consensus 101 i 101 (179)
T 2jae_A 101 I 101 (179)
T ss_dssp S
T ss_pred C
T ss_conf 6
No 80
>>2p6p_A Glycosyl transferase; GT-B family, X-RAY-diffraction,urdamycina- biosynthesis; 1.88A {Streptomyces fradiae} (A:1-200,A:368-384)
Probab=37.78 E-value=26 Score=15.34 Aligned_cols=38 Identities=16% Similarity=0.274 Sum_probs=27.1
Q ss_pred HHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEE
Q ss_conf 99986126864999961135888612899999985796133244
Q gi|254780368|r 101 LREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVS 144 (249)
Q Consensus 101 La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~ 144 (249)
|.+.++...+|+|+.+--+ .-+..+|+.||+|++....
T Consensus 99 l~~~l~~~~~D~vi~D~~~------~~~~~vA~~l~IP~v~~~~ 136 (217)
T 2p6p_A 99 MLDFSRAWRPDLIVGGTMS------YVAPLLALHLGVPHARQTW 136 (217)
T ss_dssp HHHHHHHHCCSEEEEETTC------THHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHCCCEEECCCCC------HHHHHHHHHHHCCCCEEEC
T ss_conf 9999875065533034444------1788999985143100102
No 81
>>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A* (A:1-175,A:352-379)
Probab=37.69 E-value=26 Score=15.33 Aligned_cols=103 Identities=17% Similarity=0.190 Sum_probs=56.1
Q ss_pred EEEEEECCCCCCEEECCCCCEEEECCCCEECCCHHHHHHHHHH---HHHHCCCCCCEEEE-------------EECCCHH
Q ss_conf 9860303887605980788816324877332601368999999---99855998528999-------------9714101
Q gi|254780368|r 5 VPIKGVINYNTKVRIKNDYSGIETENTKISMNPFDEIALEESL---QLREKGIATEVIVV-------------SIGSCKV 68 (249)
Q Consensus 5 V~vK~VpD~~~~i~i~~~~~~i~~~~~~~~in~~D~~AlE~Al---~lke~~~g~~V~~l-------------svG~~~~ 68 (249)
+.+|+-||-+..+++..+-.+=+-=-+...-+|-|++-+|..+ .+|+. +..+||++ .-|+..+
T Consensus 59 ~~~~kFpDGE~~V~i~e~vrg~dV~IIqs~~~~~nd~lmELlllidAlr~~-gA~~ItlViPYl~YaRQDr~~~~g~~~a 137 (203)
T 2ji4_A 59 VQVYQEPNRETRVQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTS-CAKSIIGVIPYFPYSKQCKMRKRGSIVS 137 (203)
T ss_dssp EEEEECTTSCEEEEECSCCTTCEEEEECCCCSCHHHHHHHHHHHHHHHHHT-TCSEEEEECSSCSSCCC-------CCHH
T ss_pred EEEEECCCCCEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEECCCCCCCCCCCCCCCCCHH
T ss_conf 388987999789886887689968999279998137899999999999873-7752589722456432452002565058
Q ss_pred HHHHHHHHHHCCCCCEEEECC----CC-----CCHHHHHHHHHHHHHCC
Q ss_conf 588888785077762376336----54-----78899999999986126
Q gi|254780368|r 69 EEVLKNSLAMGADRGILIESN----ET-----LEPLSIAKILREIVKKE 108 (249)
Q Consensus 69 ~~~Lr~alAmGaD~ai~i~d~----~~-----~D~~~~A~~La~~i~~~ 108 (249)
....+...++|+|+.+.++-. .+ .+-+..|-+|+++|++.
T Consensus 138 ~~va~~L~~~g~d~VitvD~Hs~~i~~~F~ipv~nl~a~~~~~~~~~~~ 186 (203)
T 2ji4_A 138 KLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASMILSEAIRRI 186 (203)
T ss_dssp HHHHHHHHHTTCCEEEEESCSSGGGGGGSSSCEEEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 8998777752887222541373554114567654431399999999998
No 82
>>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} (A:)
Probab=37.59 E-value=27 Score=15.32 Aligned_cols=51 Identities=10% Similarity=-0.007 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEEEC
Q ss_conf 9999999998612686499996113588861289999998579613324433432
Q gi|254780368|r 95 LSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIKII 149 (249)
Q Consensus 95 ~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~~~ 149 (249)
...++.|+..+...++|+|++ .+.+.-..+..+|..||.|++.....-...
T Consensus 12 ~~~~~~l~~~i~~~~~d~iv~----i~~~g~~~a~~la~~l~~~~~~~~~~~~~~ 62 (153)
T 1vdm_A 12 DRAIFALAEKLREYKPDVIIG----VARGGLIPAVRLSHILGDIPLKVIDVKFYK 62 (153)
T ss_dssp HHHHHHHHHHHHHHCCSEEEE----ETTTTHHHHHHHHHHTTSCCEEEEEEECCC
T ss_pred HHHHHHHHHHHHCCCCCEEEE----ECCCCCHHHHHHHHHHCCCCEEEEEEEECC
T ss_conf 999999999987239999999----677822269999987535874589776303
No 83
>>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} (A:143-270)
Probab=37.32 E-value=27 Score=15.29 Aligned_cols=40 Identities=23% Similarity=0.237 Sum_probs=27.6
Q ss_pred HHHHHHHHCC-CCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEE
Q ss_conf 9999986126-8649999611358886128999999857961332
Q gi|254780368|r 99 KILREIVKKE-NPIIVIAGKQTTDNESNQTGQMLAALMRWPQATF 142 (249)
Q Consensus 99 ~~La~~i~~~-~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~ 142 (249)
..||+.+++. .+|+|++ .|.+.-.....+|..||.|++-.
T Consensus 2 ~~la~~i~~~~~~d~ivg----~~~gg~~~a~~la~~l~~p~~~~ 42 (128)
T 1u9y_A 2 PKLAEYVKDKLNDPIVLA----PDKGALEFAKTASKILNAEYDYL 42 (128)
T ss_dssp HHHHHHHTTTCSSCEEEE----SSGGGHHHHHHHHHHHTCCEEEB
T ss_pred HHHHHHHHHHCCCCEEEE----CCCCHHHHHHHHHHHCCCCEEEE
T ss_conf 899999886456868995----68760367787776138854677
No 84
>>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} (A:)
Probab=37.07 E-value=27 Score=15.26 Aligned_cols=31 Identities=10% Similarity=-0.027 Sum_probs=21.1
Q ss_pred CCCEEEEEECCCCCCCEEHHHHHHHHHCCCC
Q ss_conf 8649999611358886128999999857961
Q gi|254780368|r 109 NPIIVIAGKQTTDNESNQTGQMLAALMRWPQ 139 (249)
Q Consensus 109 ~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~ 139 (249)
..|+|++|..+.|........+++..||.|.
T Consensus 81 ~Id~li~~s~~~~~~~~~~a~~v~~~lg~~~ 111 (339)
T 1mzj_A 81 EIDLVVVSTMTNFVHTPPLSVAIAHELGADN 111 (339)
T ss_dssp GCCEEEEECSCCCCCSSCHHHHHHHHHTCTT
T ss_pred HCCEEEEECCCCCCCCCCHHHHHHHHHCCCC
T ss_conf 6301353013687789529999997646788
No 85
>>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 1doz_A 2q2n_A* 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A (A:1-148,A:291-310)
Probab=36.50 E-value=28 Score=15.21 Aligned_cols=74 Identities=15% Similarity=0.099 Sum_probs=45.4
Q ss_pred CCHHHHHHHHHHHHHH----CCCCCC--EE-EEEECCCHHHHHHHHHHHHCCCCCEEEECCC---CCCHHHHHHHHHHHH
Q ss_conf 6013689999999985----599852--89-9997141015888887850777623763365---478899999999986
Q gi|254780368|r 36 NPFDEIALEESLQLRE----KGIATE--VI-VVSIGSCKVEEVLKNSLAMGADRGILIESNE---TLEPLSIAKILREIV 105 (249)
Q Consensus 36 n~~D~~AlE~Al~lke----~~~g~~--V~-~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~---~~D~~~~A~~La~~i 105 (249)
+|.-++.-+.+-.|++ ...|.+ |. +...|++..+++|++..+-|.|+.+.+.-.. .+.+-..-..+.+++
T Consensus 54 SPL~~~T~~qa~al~~~L~~~~~~~~~~V~~amry~~P~i~~~i~~l~~~g~~~ii~lPLyPqyS~sTtgs~~~~~~~a~ 133 (168)
T 2h1v_A 54 SPLAQITEQQAHNLEQHLNEIQDEITFKAYIGLAHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSYNKRAKEEA 133 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEEESSSSSBHHHHHHHHHHTTCCEEEEEESSSSCCTTTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHH
T ss_conf 85699999999999888765079626899975133667488899999964886438887566415574206999999998
Q ss_pred HCCC
Q ss_conf 1268
Q gi|254780368|r 106 KKEN 109 (249)
Q Consensus 106 ~~~~ 109 (249)
++.+
T Consensus 134 ~~~~ 137 (168)
T 2h1v_A 134 EKLG 137 (168)
T ss_dssp HHHC
T ss_pred HHCC
T ss_conf 7344
No 86
>>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* (A:1-15,A:50-172)
Probab=35.86 E-value=28 Score=15.14 Aligned_cols=28 Identities=7% Similarity=0.018 Sum_probs=10.8
Q ss_pred CEEEEEECCCCCCCEEHHHHHHHHHCCC
Q ss_conf 4999961135888612899999985796
Q gi|254780368|r 111 IIVIAGKQTTDNESNQTGQMLAALMRWP 138 (249)
Q Consensus 111 DLIl~G~~S~D~~~g~v~~~lA~~Lg~p 138 (249)
|+|+.|..+.+........+++..||++
T Consensus 41 D~vv~gs~~~~~~~~~~a~~i~~~lgl~ 68 (138)
T 3il6_A 41 DFILVATVTPDFNMPSVACQVQGAIGAT 68 (138)
T ss_dssp CEEEEECSSCSCSSSCHHHHHHHHTTCT
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHCCC
T ss_conf 3368840258762046889987760488
No 87
>>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A* (A:183-372)
Probab=35.42 E-value=27 Score=15.25 Aligned_cols=52 Identities=12% Similarity=0.135 Sum_probs=34.4
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEE
Q ss_conf 88999999999861268649999611358886128999999857961332443
Q gi|254780368|r 93 EPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSN 145 (249)
Q Consensus 93 D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~ 145 (249)
|...+.++ ++.+++-.-=+|++|....-.+..+-=-.+|+.+|+|.++.-..
T Consensus 9 ~~~~i~~~-~~~L~~A~rPvii~G~~~~~~~a~~~l~~lae~~~iPv~~t~~~ 60 (190)
T 2pgn_A 9 PNEDVREA-AAQLVAAKNPVILAGGGVARSGGSEALLKLAEMVGVPVVTTSTG 60 (190)
T ss_dssp CHHHHHHH-HHHHHHCSSEEEEECHHHHHHTCHHHHHHHHHHHTCCEEECTTT
T ss_pred CHHHHHHH-HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCC
T ss_conf 58999998-76530234333345653123443899999999829747623557
No 88
>>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} (A:780-1191)
Probab=35.19 E-value=29 Score=15.08 Aligned_cols=34 Identities=24% Similarity=0.281 Sum_probs=21.5
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECC
Q ss_conf 85289999714101588888785077762376336
Q gi|254780368|r 55 ATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESN 89 (249)
Q Consensus 55 g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~ 89 (249)
...+..+..|.....+.-+.+...|+|- |.|+..
T Consensus 214 ~~~~~~~v~g~~~~~~~a~~~~~~G~D~-Iiv~g~ 247 (412)
T 1ea0_A 214 DAKVTVKLVSRSGIGTIAAGVAKANADI-ILISGN 247 (412)
T ss_dssp TCEEEEEEECCTTHHHHHHHHHHTTCSE-EEEECT
T ss_pred CCCEEEEEECCCCHHHHHHHHHHCCCCE-EEEECC
T ss_conf 9977999913667799997766367999-998089
No 89
>>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} (A:)
Probab=35.14 E-value=29 Score=15.07 Aligned_cols=81 Identities=15% Similarity=0.168 Sum_probs=50.8
Q ss_pred CCEEEEEECCCHHHH-------------HHHHHH-HHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 528999971410158-------------888878-507776237633654788999999999861268649999611358
Q gi|254780368|r 56 TEVIVVSIGSCKVEE-------------VLKNSL-AMGADRGILIESNETLEPLSIAKILREIVKKENPIIVIAGKQTTD 121 (249)
Q Consensus 56 ~~V~~lsvG~~~~~~-------------~Lr~al-AmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D 121 (249)
-+|-+++.|.+-.+. .|+..+ ..|.+-.. .. .-.-|...+..+|.++++..++|+|++--.++-
T Consensus 16 ~rv~ii~~GdE~~~~~~~~g~i~d~n~~~l~~~l~~~G~~v~~-~~-~v~Dd~~~i~~~i~~~~~~~~~DlVittGG~g~ 93 (178)
T 2pjk_A 16 LNFYVITISTSRYEKLLKKEPIVDESGDIIKQLLIENGHKIIG-YS-LVPDDKIKILKAFTDALSIDEVDVIISTGGTGY 93 (178)
T ss_dssp CEEEEEEECHHHHHHHHTTCCCCCHHHHHHHHHHHHTTCEEEE-EE-EECSCHHHHHHHHHHHHTCTTCCEEEEESCCSS
T ss_pred CEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEE-EE-ECCCHHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf 7799999856786665467985244699999999988998999-87-415409999999999886047538852688766
Q ss_pred CCCEEHHHHHHHHHCCC
Q ss_conf 88612899999985796
Q gi|254780368|r 122 NESNQTGQMLAALMRWP 138 (249)
Q Consensus 122 ~~~g~v~~~lA~~Lg~p 138 (249)
+..-.++..+++..+-+
T Consensus 94 g~~D~t~~ai~~~g~~~ 110 (178)
T 2pjk_A 94 SPTDITVETIRKLFDRE 110 (178)
T ss_dssp STTCCHHHHHGGGCSEE
T ss_pred CCCCEEEEEHHHCCCEE
T ss_conf 75323420011015610
No 90
>>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} (A:180-307)
Probab=35.01 E-value=29 Score=15.06 Aligned_cols=70 Identities=11% Similarity=0.019 Sum_probs=41.1
Q ss_pred HHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEE-ECCCEEEEEEECCCCEEEEEECCCEEEEEECC
Q ss_conf 6126864999961135888612899999985796133244334-32865999983589679999639889998435
Q gi|254780368|r 105 VKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIK-IIDNHAIVTREVGHGTMTMETPLPAVITVDLN 179 (249)
Q Consensus 105 i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~-~~~~~~~v~r~~e~g~e~v~~~lPavisv~~~ 179 (249)
+++-.-=+|++|......+....--.+|+.+|+|.++.-..-. +.+++ ...-|.--....--+++.+...
T Consensus 9 l~~A~rPvii~G~g~~~~~a~~~l~~lae~~g~pv~~t~~~~g~~~~~h-----p~~~g~~g~~~~aDlil~iG~~ 79 (128)
T 1efp_A 9 ELTSARRVVSGGRGLGSKESFAIIEELADKLGAAVGASRAAVDSGYAPN-----DWQVGQTGKVVAPELYVAVGIS 79 (128)
T ss_dssp CTTTCSEEEEECGGGCSSSTTHHHHHHHHHHTCEEEECHHHHHTTSSCG-----GGBBSSSSBCCCCSEEEEESCC
T ss_pred CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCEEEECHHHCCCCCCCH-----HHHCCCCCCCCCCCEEEEEEEE
T ss_conf 4245748998577446888999999999986994786076506899996-----8864777850278899998232
No 91
>>3kuu_A Phosphoribosylaminoimidazole carboxylase catalytic subunit PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structural genomics; 1.41A {Yersinia pestis} PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A* (A:)
Probab=34.68 E-value=29 Score=15.02 Aligned_cols=85 Identities=14% Similarity=0.095 Sum_probs=52.7
Q ss_pred CCCEEEEEECCCHHHHHHHHHH----HHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHH
Q ss_conf 8528999971410158888878----507776237633654788999999999861268649999611358886128999
Q gi|254780368|r 55 ATEVIVVSIGSCKVEEVLKNSL----AMGADRGILIESNETLEPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQM 130 (249)
Q Consensus 55 g~~V~~lsvG~~~~~~~Lr~al----AmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~ 130 (249)
...|. +-||..+..+..+++. .+|.+--+.|..- --.|..+ .-+++..+..++++|+++. +.++++|+.
T Consensus 12 ~~~V~-Ii~gS~SD~~~~~~a~~~L~~~gi~~e~~V~Sa-HR~p~~l-~~~~~~~~~~~~~viIa~A----G~aa~Lpgv 84 (174)
T 3kuu_A 12 GVKIA-IVXGSKSDWATXQFAADVLTTLNVPFHVEVVSA-HRTPDRL-FSFAEQAEANGLHVIIAGN----GGAAHLPGX 84 (174)
T ss_dssp CCCEE-EEESSGGGHHHHHHHHHHHHHTTCCEEEEECCT-TTCHHHH-HHHHHHTTTTTCSEEEEEE----ESSCCHHHH
T ss_pred CCCEE-EEECCHHHHHHHHHHHHHHHHCCCCEEEEEEEE-EECHHHH-HHHHHHHHHCCCEEEEEEC----CCCCCCCHH
T ss_conf 99489-997967459999999999998499569999977-7081788-8889999864983999814----775445016
Q ss_pred HHHHHCCCCEEEEEEE
Q ss_conf 9998579613324433
Q gi|254780368|r 131 LAALMRWPQATFVSNI 146 (249)
Q Consensus 131 lA~~Lg~p~vt~v~~i 146 (249)
+|.+..+|-+..=...
T Consensus 85 va~~t~~PVIgvP~~~ 100 (174)
T 3kuu_A 85 LAAKTLVPVLGVPVQS 100 (174)
T ss_dssp HHHTCSSCEEEEEECC
T ss_pred HHHHCCCCCCCCCCCC
T ss_conf 7773567621233355
No 92
>>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} (A:)
Probab=34.37 E-value=30 Score=14.99 Aligned_cols=96 Identities=14% Similarity=-0.007 Sum_probs=62.6
Q ss_pred CHHHHHHHHHHHHHCC----CCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEECCCCEEEEEE
Q ss_conf 8899999999986126----864999961135888612899999985796133244334328659999835896799996
Q gi|254780368|r 93 EPLSIAKILREIVKKE----NPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIKIIDNHAIVTREVGHGTMTMET 168 (249)
Q Consensus 93 D~~~~A~~La~~i~~~----~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~~~~~~~~v~r~~e~g~e~v~~ 168 (249)
+-...+..|+..+... .+|+|++ .+..+-..+..+|..|++|+.....+-..........+....+..+...
T Consensus 39 ~~~~~~~~la~~i~~~~~~~~~~~vv~----~~~~g~~~a~~~a~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (187)
T 1g2q_A 39 LFQKLIDAFKLHLEEAFPEVKIDYIVG----LESRGFLFGPTLALALGVGFVPVRKAGKLPGECFKATYEKEYGSDLFEI 114 (187)
T ss_dssp HHHHHHHHHHHHHHHHCTTSCCCEEEE----ETTTHHHHHHHHHHHHTCEEEEEEETTCSCSSEEEEEEECSSCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCEEEE----ECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEECCCCCCEEEE
T ss_conf 999999999999998606668878998----6455417899999995998267741357887205788641441120111
Q ss_pred CC------CEEEEEECCCCCCCCCCHHHHHHH
Q ss_conf 39------889998435565454698889988
Q gi|254780368|r 169 PL------PAVITVDLNLNEPRYISLPNIIKA 194 (249)
Q Consensus 169 ~l------Pavisv~~~~n~PR~psl~~im~A 194 (249)
.. .-|+-|+.=+.+- -|+....+.
T Consensus 115 ~~~~~~~g~~VliVDDvitTG--~Tl~~~~~~ 144 (187)
T 1g2q_A 115 QKNAIPAGSNVIIVDDIIATG--GSAAAAGEL 144 (187)
T ss_dssp ETTSSCTTCEEEEEEEEESSC--HHHHHHHHH
T ss_pred ECCCCCCCCEEEEEEHHHHHC--HHHHHHHHH
T ss_conf 025435786389985353517--599999999
No 93
>>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} (A:1-146)
Probab=33.88 E-value=30 Score=14.94 Aligned_cols=83 Identities=18% Similarity=0.211 Sum_probs=57.4
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 26013689999999985599852899997141015888887850777623763365478899999999986126864999
Q gi|254780368|r 35 MNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKKENPIIVI 114 (249)
Q Consensus 35 in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~~DLIl 114 (249)
++-.+...+|.+-+||+......+..+|.-+ ..+...+++-+|++. |+. .+.++...-..+..++++......-
T Consensus 51 ~~mP~~dG~e~~~~lr~~~~~~pii~it~~~--~~~~~~~a~~~Ga~d-yl~---KP~~~~~L~~~i~~~l~~~~~~~~~ 124 (146)
T 1p2f_A 51 VXLPDYSGYEICRXIKETRPETWVILLTLLS--DDESVLKGFEAGADD-YVT---KPFNPEILLARVKRFLEREKKGLYD 124 (146)
T ss_dssp SBCSSSBHHHHHHHHHHHCTTSEEEEEESCC--SHHHHHHHHHHTCSE-EEE---SSCCHHHHHHHHHHHHHHCCCSEEE
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCEEEECCCC--CCCEEEEEECCCCCC-EEE---CCCCCHHHHHHHHHHHHCCCCCCEE
T ss_conf 8998887636776545304557457302222--210157532146532-152---4754034999999998305578277
Q ss_pred EEECCCCCC
Q ss_conf 961135888
Q gi|254780368|r 115 AGKQTTDNE 123 (249)
Q Consensus 115 ~G~~S~D~~ 123 (249)
.+....|..
T Consensus 125 ~~~l~~~~~ 133 (146)
T 1p2f_A 125 FGDLKIDAT 133 (146)
T ss_dssp ETTEEEETT
T ss_pred ECCEEEECC
T ss_conf 898888026
No 94
>>1q8f_A Pyrimidine nucleoside hydrolase; open alpha-beta structure, NH-fold; 1.70A {Escherichia coli} (A:1-192,A:240-294)
Probab=33.85 E-value=23 Score=15.70 Aligned_cols=107 Identities=10% Similarity=0.127 Sum_probs=60.2
Q ss_pred CEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHH-HHHHH--HHHHCCCCCEEEEC--------C--C---CCCHH
Q ss_conf 73326013689999999985599852899997141015-88888--78507776237633--------6--5---47889
Q gi|254780368|r 32 KISMNPFDEIALEESLQLREKGIATEVIVVSIGSCKVE-EVLKN--SLAMGADRGILIES--------N--E---TLEPL 95 (249)
Q Consensus 32 ~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~-~~Lr~--alAmGaD~ai~i~d--------~--~---~~D~~ 95 (249)
+...++.++.|++.-.++-.++ .++|+.+++||-.-- ..|+. .++.-..+.+.... . + ..|+.
T Consensus 94 ~~~~~~~~~~A~~~l~~~l~~~-p~~vtIl~iGpLTNLA~al~~~P~i~~~ik~iviMGGa~~~Gn~~~~aE~N~~~DP~ 172 (247)
T 1q8f_A 94 PLTRQAESTHAVKYIIDTLMAS-DGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFTPSAEFNIFADPE 172 (247)
T ss_dssp CCCCCCCSSCHHHHHHHHHHHS-CSCEEEEECSCSHHHHHHHHHCGGGGGGEEEEEEECCCSSCCSSSSSCCHHHHTCHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHC-CCCEEEEECCCCHHHHHHHHHCHHHHHHHHHEEECCCCCCCCCCCCCHHCCEEECCH
T ss_conf 8654442266999999999828-896699963640059999876939887435357745678888878441101797746
Q ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEE---EEEEECC
Q ss_conf 999999998612686499996113588861289999998579613324---4334328
Q gi|254780368|r 96 SIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFV---SNIKIID 150 (249)
Q Consensus 96 ~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v---~~i~~~~ 150 (249)
+...++.. +..++++|...+| |...|..|+=..++.. +++|+.+
T Consensus 173 AA~~Vl~s-----~~pi~~vpldvtd------~~~~~~~~~p~~~~~~~~~v~ve~~~ 219 (247)
T 1q8f_A 173 AARVVFTS-----GVPLVMMGLDLTD------ATCIGYLINPDGIKTQEMYVEVDVNS 219 (247)
T ss_dssp HHHHHHTS-----CSCEEEECHHHHT------HHHHHHHHCGGGEEEEEECEEECCCS
T ss_pred HHHHHHCC-----CCCEEECCCCCCH------HHHHHHHHCCCCEEEEEEEEEEECCC
T ss_conf 76888527-----9964765665337------77679870700105799648998889
No 95
>>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis; HET: AMP GLN; 2.00A {Escherichia coli} (A:200-553)
Probab=33.80 E-value=30 Score=14.93 Aligned_cols=24 Identities=13% Similarity=0.297 Sum_probs=18.3
Q ss_pred HHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 999999861268649999611358
Q gi|254780368|r 98 AKILREIVKKENPIIVIAGKQTTD 121 (249)
Q Consensus 98 A~~La~~i~~~~~DLIl~G~~S~D 121 (249)
-..+.+.++..+++.|++|..+-|
T Consensus 130 ~~~l~~~a~~~g~~viltG~g~D~ 153 (354)
T 1ct9_A 130 MYLMSRKIKAMGIKMVLSGEGSDE 153 (354)
T ss_dssp HHHHHHHHHHTTCCEEECCTTHHH
T ss_pred HHHHHHHHHHCCCEEEEECCCHHH
T ss_conf 789999997459889996867788
No 96
>>1ysl_A HMG-COA synthase; thiolase family, coenzymea, lyase; HET: CSD COA; 1.90A {Enterococcus faecalis} PDB: 1ysl_B* 1x9e_A 2hdb_A* (A:1-375)
Probab=32.87 E-value=31 Score=14.84 Aligned_cols=29 Identities=28% Similarity=0.361 Sum_probs=15.1
Q ss_pred CEEEEEECCCCCCCEEHHHHHHHHHCCCC
Q ss_conf 49999611358886128999999857961
Q gi|254780368|r 111 IIVIAGKQTTDNESNQTGQMLAALMRWPQ 139 (249)
Q Consensus 111 DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~ 139 (249)
|+++++..+.|........++.+.||++.
T Consensus 91 dili~~~~t~~~~~p~~a~~i~~~lg~~~ 119 (375)
T 1ysl_A 91 DMVIVGTESSIDESKAAAVVLHRLMGIQP 119 (375)
T ss_dssp EEEEEECSSCSBSSSCHHHHHHHHTTCCS
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 89999045456545677899999723898
No 97
>>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 1zpd_A* (A:181-357)
Probab=32.86 E-value=32 Score=14.83 Aligned_cols=53 Identities=9% Similarity=0.166 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEE
Q ss_conf 889999999998612686499996113588861289999998579613324433
Q gi|254780368|r 93 EPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNI 146 (249)
Q Consensus 93 D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i 146 (249)
|+-.+.++ ++.++.-.-=+|++|......+..+.--.+++.+|+|.++....-
T Consensus 15 ~~~~i~~~-~~~L~~A~rPvii~G~g~~~~~a~~~l~~lae~~g~Pv~~t~~g~ 67 (177)
T 2wvg_A 15 LNAAVEET-LKFIANRDKVAVLVGSKLRAAGAEEAAVKFADALGGAVATMAAAK 67 (177)
T ss_dssp HHHHHHHH-HHHHTTCCCEEEEECTTTTTTTCHHHHHHHHHHHCCEEEEEGGGT
T ss_pred CHHHHHHH-HHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCEEECCCCC
T ss_conf 79999999-999861768768516763420269999999987588801435667
No 98
>>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} (A:)
Probab=32.78 E-value=32 Score=14.83 Aligned_cols=15 Identities=33% Similarity=0.310 Sum_probs=5.7
Q ss_pred HHHHHHHHHCCCCEE
Q ss_conf 888998852166120
Q gi|254780368|r 188 LPNIIKARKKRIEKK 202 (249)
Q Consensus 188 l~~im~A~kk~i~~~ 202 (249)
++.+.++-+..++++
T Consensus 165 i~~~~~~~~~~i~Ii 179 (225)
T 1mzh_A 165 VRLIKSSAKGRIKVK 179 (225)
T ss_dssp HHHHHHHHTTSSEEE
T ss_pred HHHHHHHHCCCCEEE
T ss_conf 999999858875387
No 99
>>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} (A:)
Probab=32.35 E-value=32 Score=14.78 Aligned_cols=84 Identities=10% Similarity=0.042 Sum_probs=51.3
Q ss_pred CEEEEEECCCHHH--------HHHHHHHHH--CCCCCEEEECC--CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
Q ss_conf 2899997141015--------888887850--77762376336--54788999999999861268649999611358886
Q gi|254780368|r 57 EVIVVSIGSCKVE--------EVLKNSLAM--GADRGILIESN--ETLEPLSIAKILREIVKKENPIIVIAGKQTTDNES 124 (249)
Q Consensus 57 ~V~~lsvG~~~~~--------~~Lr~alAm--GaD~ai~i~d~--~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~ 124 (249)
++-+++.|.+-.. ..+...|.. -...++.+... -.-|.-.+..+|...+...++|+|++.-.++-+..
T Consensus 7 rv~ii~tGdEi~~~~~~d~~g~~~ns~ll~~~l~~~G~~~~~~~iv~Dd~~~i~~~i~~~~~~~~~DlvittGG~g~g~~ 86 (167)
T 1uuy_A 7 KVAILTVSDTVSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQKWSDVDEMDLILTLGGTGFTPR 86 (167)
T ss_dssp EEEEEEECHHHHTTSSCCSHHHHHHHHHHHTTTTTTSEEEEEEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSSTT
T ss_pred EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
T ss_conf 99999969767879845875899999999713103797798877767869999999998877515425661036666741
Q ss_pred EEHHHHHHHHHCCCCE
Q ss_conf 1289999998579613
Q gi|254780368|r 125 NQTGQMLAALMRWPQA 140 (249)
Q Consensus 125 g~v~~~lA~~Lg~p~v 140 (249)
-.+...++++.+.+..
T Consensus 87 D~t~~al~~~~~~~~~ 102 (167)
T 1uuy_A 87 DVTPEATKKVIERETP 102 (167)
T ss_dssp CCHHHHHHHHCSEECH
T ss_pred EEEEEECCCCCCEECC
T ss_conf 3420000112211134
No 100
>>3dah_A Ribose-phosphate pyrophosphokinase; seattle structural genomics center for infectious disease, ssgcid, cytoplasm, magnesium; HET: AMP; 2.30A {Burkholderia pseudomallei 1710B} (A:153-295)
Probab=31.96 E-value=33 Score=14.74 Aligned_cols=49 Identities=18% Similarity=0.154 Sum_probs=34.3
Q ss_pred HHHHHHHHHCCCC--CEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEEECC
Q ss_conf 9999998612686--4999961135888612899999985796133244334328
Q gi|254780368|r 98 AKILREIVKKENP--IIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIKIID 150 (249)
Q Consensus 98 A~~La~~i~~~~~--DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~~~~ 150 (249)
+..|++.+++.++ |+| . +.|.+.-..+..+|..||+|++.....-...+
T Consensus 1 S~~la~~i~~~~~~~dvi-v---~~~~gg~~~a~~~a~~lg~~~~~~~k~~~~~~ 51 (143)
T 3dah_A 1 TPILLGDLRKQNYPDLLV-V---SPDVGGVVRARALAKQLNCDLAIIDKRRPKAN 51 (143)
T ss_dssp HHHHHHHHHTTCCTTEEE-E---CCSSTTHHHHHHHHHHTTCEEEC---------
T ss_pred CHHHHHHHHHHCCCCCEE-E---ECCCCHHHHHHHHHHHCCCCEEEEEEECCCCC
T ss_conf 187799999638987789-9---36812899999999980999899998648898
No 101
>>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, loop-6, purine biosynthesis; 2.40A {Borrelia burgdorferi} (A:)
Probab=31.46 E-value=33 Score=14.69 Aligned_cols=78 Identities=15% Similarity=0.149 Sum_probs=36.0
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECC-C-CC----------CHHHHHHHHH
Q ss_conf 2601368999999998559985289999714101588888785077762376336-5-47----------8899999999
Q gi|254780368|r 35 MNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESN-E-TL----------EPLSIAKILR 102 (249)
Q Consensus 35 in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~-~-~~----------D~~~~A~~La 102 (249)
-+.++..-.....+++.....+.+.+..++ ..+.-+.+...|+|- +.+... . +. .....-..++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~---~~~~a~~~~~~g~D~-ivv~g~~~gg~~~~~~~~~~~~~~~~l~~v~ 249 (404)
T 1eep_A 174 AHGHSTRIIELIKKIKTKYPNLDLIAGNIV---TKEAALDLISVGADC-LKVGIGPGSICTTRIVAGVGVPQITAICDVY 249 (404)
T ss_dssp SCCSSHHHHHHHHHHHHHCTTCEEEEEEEC---SHHHHHHHHTTTCSE-EEECSSCSTTSHHHHHHCCCCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEECCCC---CHHHHHHHHHCCCCE-EEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 466516589999999986897169847827---799999999769999-9982667778777533566630578999999
Q ss_pred HHHHCCCCCEEEEE
Q ss_conf 98612686499996
Q gi|254780368|r 103 EIVKKENPIIVIAG 116 (249)
Q Consensus 103 ~~i~~~~~DLIl~G 116 (249)
.+....+.-+|..|
T Consensus 250 ~~~~~~~ipiiaaG 263 (404)
T 1eep_A 250 EACNNTNICIIADG 263 (404)
T ss_dssp HHHTTSSCEEEEES
T ss_pred HHHCCCCCEEEECC
T ss_conf 98576898599768
No 102
>>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A (A:149-301)
Probab=31.36 E-value=33 Score=14.68 Aligned_cols=67 Identities=15% Similarity=0.132 Sum_probs=52.5
Q ss_pred EEEEEECCCHHHHHHHHHHHHCCCCCEE--E-ECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
Q ss_conf 8999971410158888878507776237--6-33654788999999999861268649999611358886
Q gi|254780368|r 58 VIVVSIGSCKVEEVLKNSLAMGADRGIL--I-ESNETLEPLSIAKILREIVKKENPIIVIAGKQTTDNES 124 (249)
Q Consensus 58 V~~lsvG~~~~~~~Lr~alAmGaD~ai~--i-~d~~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~ 124 (249)
-.+=.||-...--++.-+||-|||.... + ......+.-..+..+....++.++.+|++.+...|.+.
T Consensus 37 ~ivEvMGR~aG~LAl~~~la~~a~~~~i~~i~~pE~~~~~~~~~~~i~~~~~~~~~~vIvvsEG~~~~~~ 106 (153)
T 3hno_A 37 FVLEVMGRHAGWIAAAGGLASSPEREIPVVILFPEISFDKQKFLAKVDSCVKKFGYCSVVVSEGVKGDDG 106 (153)
T ss_dssp EEEEECCSSCCHHHHGGGGGCCSSSCCCEEEECTTSCCCHHHHHHHHHHHHHHHSCEEEEEETTCCCSSS
T ss_pred EEEEECCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCEECCCC
T ss_conf 9999608764478887677531666676067478766457788999999983589569999573465678
No 103
>>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, structural genomics, PSI, protein structure initative; HET: G4P; 1.80A {Bacillus subtilis} (A:)
Probab=31.16 E-value=34 Score=14.66 Aligned_cols=86 Identities=10% Similarity=0.023 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEEE--CCCEEE--EEEECCCCEEEEEEC
Q ss_conf 8999999999861268649999611358886128999999857961332443343--286599--998358967999963
Q gi|254780368|r 94 PLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIKI--IDNHAI--VTREVGHGTMTMETP 169 (249)
Q Consensus 94 ~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~~--~~~~~~--v~r~~e~g~e~v~~~ 169 (249)
....++.|++.++..++|+|++- +.+.-..+..+|..|+.|++-.-..... ....+. ..+....+.+.....
T Consensus 38 ~~~ia~~i~~~~~~~~~d~iv~~----~~gg~~~a~~la~~l~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (197)
T 1y0b_A 38 XQRIGDEFASRFAKDGITKIVTI----ESSGIAPAVXTGLKLGVPVVFARKHKSLTLTDNLLTASVYSFTKQTESQIAVS 113 (197)
T ss_dssp HHHHHHHHHHHTTTTTCCEEEEE----TTTTHHHHHHHHHHHTCCEEEEBSSCCSSCCSSEEEEEEEETTTTEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCCCCEEEEC----CCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEEECCCCHHHHHHH
T ss_conf 99999999998507899799971----74035999999997064579998516778988579999985204440110023
Q ss_pred C------CEEEEEECCCCCC
Q ss_conf 9------8899984355654
Q gi|254780368|r 170 L------PAVITVDLNLNEP 183 (249)
Q Consensus 170 l------Pavisv~~~~n~P 183 (249)
. --|+-|+.=+.+-
T Consensus 114 ~~~~~~g~~VliVDDii~TG 133 (197)
T 1y0b_A 114 GTHLSDQDHVLIIDDFLANG 133 (197)
T ss_dssp GGGCCTTCEEEEEEEEESSC
T ss_pred HHHHCCCCEEEEHHHHHHHH
T ss_conf 45424794699807876342
No 104
>>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid biosynthesis, cytoplasm, lysine biosynthesis; HET: AKG; 1.80A {Thermus thermophilus HB27} PDB: 2ztk_A* (A:1-277)
Probab=31.08 E-value=34 Score=14.65 Aligned_cols=107 Identities=16% Similarity=0.073 Sum_probs=58.8
Q ss_pred EECCCHHHHHHHHH----HHHHHCCCCCCEEEEEECCC----HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHH
Q ss_conf 33260136899999----99985599852899997141----01588888785077762376336547889999999998
Q gi|254780368|r 33 ISMNPFDEIALEES----LQLREKGIATEVIVVSIGSC----KVEEVLKNSLAMGADRGILIESNETLEPLSIAKILREI 104 (249)
Q Consensus 33 ~~in~~D~~AlE~A----l~lke~~~g~~V~~lsvG~~----~~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~ 104 (249)
...+..-+..++.+ -..++.+....+........ ......+.+.++|+|..++.+.-..+.|..++..++..
T Consensus 103 ~~~~~~~~~~~~~~~~~v~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~li~~l 182 (277)
T 2ztj_A 103 APHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPYVDRVGLADTVGVATPRQVYALVREV 182 (277)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGGCSEEEEEETTSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCEEEEECCCHHHHCCHHHHHHHHHH
T ss_conf 87664699999999999999997277505775012244454211013321012431146751533331001068899999
Q ss_pred HHCCCCCEEEEEECC-CCCCCEEHHHHHHHHHCCCCE
Q ss_conf 612686499996113-588861289999998579613
Q gi|254780368|r 105 VKKENPIIVIAGKQT-TDNESNQTGQMLAALMRWPQA 140 (249)
Q Consensus 105 i~~~~~DLIl~G~~S-~D~~~g~v~~~lA~~Lg~p~v 140 (249)
-+...+|+.+ |-+. -|.+.+.--.+.|-..|.-++
T Consensus 183 ~~~~~~~~~l-~~H~Hn~~Gla~An~laAi~aG~~~v 218 (277)
T 2ztj_A 183 RRVVGPRVDI-EFHGHNDTGCAIANAYEAIEAGATHV 218 (277)
T ss_dssp HHHHTTTSEE-EEEEBCTTSCHHHHHHHHHHTTCCEE
T ss_pred HHHHCCCCCE-EEEECCHHHHHHHHHHHHHHCCCCCC
T ss_conf 9860557760-26505067667677999876341113
No 105
>>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} (A:199-372)
Probab=30.80 E-value=34 Score=14.62 Aligned_cols=51 Identities=16% Similarity=0.210 Sum_probs=31.4
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEE
Q ss_conf 889999999998612686499996113588861289999998579613324433
Q gi|254780368|r 93 EPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNI 146 (249)
Q Consensus 93 D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i 146 (249)
|+-++++++.. +++-.-=+|++|... .+++.---.+|+.+|+|.++....-
T Consensus 2 ~~~~i~~a~~~-L~~AkrPvii~G~g~--~~a~~~l~~lae~~~~pv~~t~~~k 52 (174)
T 1ybh_A 2 EDSHLEQIVRL-ISESKKPVLYVGGGC--LNSSDELGRFVELTGIPVASTLMGL 52 (174)
T ss_dssp CHHHHHHHHHH-HHHCSSEEEEECGGG--TTCHHHHHHHHHHHCCCEEECTTTT
T ss_pred CHHHHHHHHHH-HHCCCCCEEEECCCC--CCHHHHHHHHHHHHCCCEEECCCCC
T ss_conf 88999999999-970799199989862--4519999999998698999874247
No 106
>>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal phosphate, isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} (A:59-157)
Probab=30.79 E-value=34 Score=14.62 Aligned_cols=40 Identities=10% Similarity=0.070 Sum_probs=18.2
Q ss_pred HHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEE
Q ss_conf 9986126864999961135888612899999985796133244
Q gi|254780368|r 102 REIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVS 144 (249)
Q Consensus 102 a~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~ 144 (249)
..+.+....+.|++ ++.|++|.=-...|.++|+|+.-++.
T Consensus 13 ~~a~~~g~~~~vv~---aSsGN~g~a~A~~a~~~g~~~~i~~p 52 (99)
T 1tdj_A 13 AGLTEEQKAHGVIT---ASAGNHAQGVAFSSARLGVKALIVMP 52 (99)
T ss_dssp HTTTTSSCSSSCEE---EECSSSHHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHCCCCEEEE---ECCCHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 99988379987999---78869999999999984997899985
No 107
>>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, thiamin thiazolone diphosphate, inhibitor; HET: TZD; 1.00A {Pseudomonas putida} (A:174-341)
Probab=30.62 E-value=34 Score=14.60 Aligned_cols=54 Identities=15% Similarity=0.212 Sum_probs=35.4
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEE
Q ss_conf 4788999999999861268649999611358886128999999857961332443
Q gi|254780368|r 91 TLEPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSN 145 (249)
Q Consensus 91 ~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~ 145 (249)
..+..++..++.. +++-.-=+|+.|......+..+.--.+|+.+|+|.++.-..
T Consensus 11 ~p~~~~i~~~~~~-L~~AkrPvii~G~~~~~~~a~~~l~~la~~~~~pv~~t~~~ 64 (168)
T 1q6z_A 11 RLNDQDLDILVKA-LNSASNPAIVLGPDVDAANANADCVMLAERLKAPVWVAPSA 64 (168)
T ss_dssp CCCHHHHHHHHHH-HHHCSSCEEEECHHHHHTTCHHHHHHHHHHHTCCEEECSSC
T ss_pred CCCHHHHHHHHHH-HHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEECCC
T ss_conf 8899999999999-97375873661454301266767899999735870220234
No 108
>>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative; 2.04A {Staphylococcus aureus} (A:)
Probab=30.52 E-value=34 Score=14.59 Aligned_cols=66 Identities=12% Similarity=0.177 Sum_probs=44.3
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 260136899999999855998528999971410158888878507776237633654788999999999861
Q gi|254780368|r 35 MNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVK 106 (249)
Q Consensus 35 in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~ 106 (249)
++-.+.+.+|..-+||+.+....|.++|... ..+...+++..||+. |+. .+.++.....++..+.+
T Consensus 57 i~lp~~~G~~l~~~i~~~~~~~~ii~ls~~~--~~~~~~~a~~~Ga~~-yl~---Kp~~~~~L~~~i~~~~~ 122 (133)
T 3b2n_A 57 IEMPGMTGLEVLAEIRKKHLNIKVIIVTTFK--RPGYFEKAVVNDVDA-YVL---KERSIEELVETINKVNN 122 (133)
T ss_dssp SSCSSSCHHHHHHHHHHTTCSCEEEEEESCC--CHHHHHHHHHTTCSE-EEE---TTSCHHHHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCEEEEECCC--CHHHHHHHHHCCCCE-EEE---CCCCHHHHHHHHHHHHH
T ss_conf 7789998999999999868999589995789--999999999879988-997---98999999999999997
No 109
>>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A* (A:175-354)
Probab=30.32 E-value=35 Score=14.57 Aligned_cols=50 Identities=14% Similarity=0.228 Sum_probs=29.2
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEE
Q ss_conf 88999999999861268649999611358886128999999857961332443
Q gi|254780368|r 93 EPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSN 145 (249)
Q Consensus 93 D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~ 145 (249)
|+-.+.. +++.+++-.--+|++|... .+++.---.+|+.+|||.++.-..
T Consensus 13 ~~~~i~~-~~~~L~~Ak~Pvii~G~g~--~~a~~~l~~lae~~~~Pv~~t~~~ 62 (180)
T 3eya_A 13 EEEELRK-LAQLLRYSSNIALMCGSGC--AGAHKELVEFAGKIKAPIVHALRG 62 (180)
T ss_dssp CHHHHHH-HHHHHHTCCSEEEEECGGG--TTCHHHHHHHHHHHTCCEEECGGG
T ss_pred CHHHHHH-HHHHHHCCCCEEEEECCCC--CHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 4899999-9998640465089944654--304899998676414874323443
No 110
>>1gu7_A 2,4-dienoyl-COA reductase; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} (A:149-329)
Probab=30.05 E-value=35 Score=14.54 Aligned_cols=44 Identities=20% Similarity=0.200 Sum_probs=31.5
Q ss_pred HHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECC
Q ss_conf 999998559985289999714101588888785077762376336
Q gi|254780368|r 45 ESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESN 89 (249)
Q Consensus 45 ~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~ 89 (249)
.|+||.-. .|.++++++.+....+..+..+..+|+|..+.-.+.
T Consensus 35 ~aiqlak~-~G~~vi~~~~~~~~~~~~~~~~~~~ga~~~i~~~~~ 78 (181)
T 1gu7_A 35 YASQIGKL-LNFNSISVIRDRPNLDEVVASLKELGATQVITEDQN 78 (181)
T ss_dssp HHHHHHHH-HTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHH
T ss_pred HHHHHHHH-CCCEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 89999987-799799999164111689999997099499968986
No 111
>>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A (A:1-148,A:302-364)
Probab=29.46 E-value=36 Score=14.47 Aligned_cols=92 Identities=12% Similarity=-0.002 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEE-CCCCCCC------EEHHHHHHHHHCCCCE
Q ss_conf 15888887850777623763365478899999999986126864999961-1358886------1289999998579613
Q gi|254780368|r 68 VEEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKKENPIIVIAGK-QTTDNES------NQTGQMLAALMRWPQA 140 (249)
Q Consensus 68 ~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~~DLIl~G~-~S~D~~~------g~v~~~lA~~Lg~p~v 140 (249)
.+..++..-+.+.|-.+.+ .|-|+..++..|+++.++.++++-+.|. .++|.|- ..+-..=|..+|--.+
T Consensus 93 ~~~i~~~l~k~~I~~li~I---GGndSm~ta~kLse~~~~~~~~i~vIGIPKTIDNDl~a~h~~s~~D~~ea~~~G~~av 169 (211)
T 3hno_A 93 YERLIEVFKAHDIGYFFYN---GGGDSADTCLKVSQLSGTLGYPIQAIHVPKTVDNDLPARHIASKTDVEQAYAMGQAAV 169 (211)
T ss_dssp HHHHHHHHHHTTEEEEEEE---ESHHHHHHHHHHHHHHHHTTCCCEEEEEECCTTCCCSCGGGCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE---CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 9999999998299879997---2727899999999998971899429961133368977689889899999999999999
Q ss_pred EEEEEEEECCC-EEEEEEECCCCEE
Q ss_conf 32443343286-5999983589679
Q gi|254780368|r 141 TFVSNIKIIDN-HAIVTREVGHGTM 164 (249)
Q Consensus 141 t~v~~i~~~~~-~~~v~r~~e~g~e 164 (249)
.++ ++-+.+ -++++|..+.-++
T Consensus 170 ~~a--~~g~~g~m~~~~r~~~~~y~ 192 (211)
T 3hno_A 170 EFA--VQGHNSVMPTIERISARPYQ 192 (211)
T ss_dssp HHH--HHTCCSEEEEEEEEEC-CCE
T ss_pred HHH--HCCCCCEEEEEEECCCCCEE
T ss_conf 999--86998879999806888703
No 112
>>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} (A:)
Probab=29.43 E-value=36 Score=14.47 Aligned_cols=23 Identities=22% Similarity=0.130 Sum_probs=8.0
Q ss_pred HHHHHHHHHHCCC--CCCEEEEEEC
Q ss_conf 9999999985599--8528999971
Q gi|254780368|r 42 ALEESLQLREKGI--ATEVIVVSIG 64 (249)
Q Consensus 42 AlE~Al~lke~~~--g~~V~~lsvG 64 (249)
|+++|.++-++.+ -.+|..|-++
T Consensus 58 a~~Aa~~aL~~agi~p~~Id~Li~~ 82 (460)
T 2v4w_A 58 CLTVVQRLMERIQLPWDSVGRLEVG 82 (460)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEEE
T ss_pred HHHHHHHHHHHCCCCHHHCCEEEEE
T ss_conf 9999999999859998999999999
No 113
>>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, structure, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} (A:41-164)
Probab=29.42 E-value=36 Score=14.47 Aligned_cols=46 Identities=11% Similarity=0.122 Sum_probs=24.5
Q ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEE
Q ss_conf 999999986126864999961135888612899999985796133244
Q gi|254780368|r 97 IAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVS 144 (249)
Q Consensus 97 ~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~ 144 (249)
....|..+.++....+|++| ++.++.|+--...|..+|||+.-++.
T Consensus 15 ~~~~i~~a~~~g~~~~v~~~--~s~gN~g~A~A~~a~~~G~~~~i~~p 60 (124)
T 1tzj_A 15 LEYLIPEALAQGCDTLVSIG--GIQSNQTRQVAAVAAHLGMKCVLVQE 60 (124)
T ss_dssp HHTTHHHHHHTTCCEEEEEE--ETTCHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEEC--CCCCHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 99999999977998789985--58865899999999972994799982
No 114
>>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} (A:1-150)
Probab=28.58 E-value=37 Score=14.38 Aligned_cols=89 Identities=8% Similarity=-0.029 Sum_probs=54.3
Q ss_pred HHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
Q ss_conf 99999855998528999971410158888878507776237633654788999999999861268649999611358886
Q gi|254780368|r 45 ESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKKENPIIVIAGKQTTDNES 124 (249)
Q Consensus 45 ~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~ 124 (249)
.--.||++..+.++++++-. ...+.++.. -+.|+.+....+.....+.....+...+++..||+++- ...
T Consensus 20 ~l~alk~~~P~a~I~~l~~~--~~~~l~~~~--p~vd~i~~~~~~~~~~~~~~~~~l~~~lr~~~~D~~i~------l~~ 89 (150)
T 1psw_A 20 LYRTLQARYPQAIIDVXAPA--WCRPLLSRX--PEVNEAIPXPLGHGALEIGERRKLGHSLREKRYDRAYV------LPN 89 (150)
T ss_dssp HHHHHHHHSTTCEEEEEECG--GGHHHHTTC--TTEEEEEEC-------CHHHHHHHHHHTTTTTCSEEEE------CSC
T ss_pred HHHHHHHHCCCCEEEEEECH--HHHHHHHHC--CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEE------CCC
T ss_conf 99999987899989999895--189999509--98568999568532003689999999998647997530------453
Q ss_pred EEHHHHHHHHHCCCCEEEE
Q ss_conf 1289999998579613324
Q gi|254780368|r 125 NQTGQMLAALMRWPQATFV 143 (249)
Q Consensus 125 g~v~~~lA~~Lg~p~vt~v 143 (249)
..-...++.++|.|..-+.
T Consensus 90 ~~~s~~l~~~~~~~~rig~ 108 (150)
T 1psw_A 90 SFKSALVPLFAGIPHRTGW 108 (150)
T ss_dssp CSGGGHHHHHTTCSEEEEE
T ss_pred CHHHHHHHHHHCCCCCCCC
T ss_conf 3023678876078731243
No 115
>>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens} (A:39-171)
Probab=28.57 E-value=37 Score=14.37 Aligned_cols=50 Identities=10% Similarity=-0.001 Sum_probs=36.7
Q ss_pred CHHHHHHHHHHHHHCCC--CCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEE
Q ss_conf 88999999999861268--6499996113588861289999998579613324433
Q gi|254780368|r 93 EPLSIAKILREIVKKEN--PIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNI 146 (249)
Q Consensus 93 D~~~~A~~La~~i~~~~--~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i 146 (249)
+-...+..|++.+++.+ +|+|++ .+.+.-.....+|..|+.|++..-.+-
T Consensus 6 ~~~~~~~~la~~i~~~~~~~~~iv~----~~~gg~~~a~~la~~l~~~~~~~~k~~ 57 (133)
T 2wns_A 6 LLSQVADILFQTAQNAGISFDTVCG----VPYTALPLATVICSTNQIPMLIRRKET 57 (133)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSEEEE----CTTTTHHHHHHHHHHHTCCEEEECCTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEE----CCCCCHHHHHHHHHHCCCCEEEEECCC
T ss_conf 9999999999999971998788995----376638999999998498389972367
No 116
>>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} (A:7-118,A:1059-1073)
Probab=28.08 E-value=38 Score=14.32 Aligned_cols=81 Identities=23% Similarity=0.241 Sum_probs=52.4
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 26013689999999985599852899997141015888887850777623763365478899999999986126864999
Q gi|254780368|r 35 MNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKKENPIIVI 114 (249)
Q Consensus 35 in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~~DLIl 114 (249)
-.+||..+.-.+-.|||. |-+++.+.--|+.....-. =||+.|+. .. |...+.+.++++.||-||
T Consensus 17 a~efDysgsqA~kaLkee--g~~tVLIN~NpaTVqT~~~-----lADkvYfe----Pi----T~e~V~~Vi~~ErPdgVL 81 (127)
T 1a9x_A 17 ACEFDYSGAQACKALREE--GYRVINVNSNPATIMTDPE-----MADATYIE----PI----HWEVVRKIIEKERPDAVL 81 (127)
T ss_dssp CTHHHHHHHHHHHHHHHH--TCEEEEECSCTTCGGGCGG-----GSSEEECS----CC----CHHHHHHHHHHHCCSEEE
T ss_pred HHHHHHHHHHHHHHHHHC--CCEEEEECCCHHHHCCCCC-----CCCEEEEC----CC----CHHHHHHHHHHHCCCEEE
T ss_conf 100366899999999986--9979998698888068812-----15157887----89----999999999986889999
Q ss_pred EEECCCCCCCEEHHHHHHHHHC
Q ss_conf 9611358886128999999857
Q gi|254780368|r 115 AGKQTTDNESNQTGQMLAALMR 136 (249)
Q Consensus 115 ~G~~S~D~~~g~v~~~lA~~Lg 136 (249)
. .-.||++--.+-.|.
T Consensus 82 l------t~GGQtaLN~~i~L~ 97 (127)
T 1a9x_A 82 P------TMGGQTALNCALELE 97 (127)
T ss_dssp C------SSSHHHHHHHHHHHH
T ss_pred E------CCCCHHHHHHHHHHH
T ss_conf 6------887725789899999
No 117
>>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {} (A:)
Probab=28.07 E-value=38 Score=14.32 Aligned_cols=46 Identities=13% Similarity=0.182 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHCCCCCEEEEEECC-CCCCCEEHHHHH---HHHHCCCCE
Q ss_conf 9999999998612686499996113-588861289999---998579613
Q gi|254780368|r 95 LSIAKILREIVKKENPIIVIAGKQT-TDNESNQTGQML---AALMRWPQA 140 (249)
Q Consensus 95 ~~~A~~La~~i~~~~~DLIl~G~~S-~D~~~g~v~~~l---A~~Lg~p~v 140 (249)
..+...|++.+++..+|+|+|-..- .-.|+-.+.-.+ ...++.+..
T Consensus 131 ~~~~~~l~~~i~~~~Pd~V~t~~~~~~H~DH~~~~~~~~~A~~~~~~~~~ 180 (270)
T 3dfi_A 131 AAIREDIESMIAECDPTLVLTCVAIGKHPDHKATRDATLLAARERGIPLR 180 (270)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTCCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 99999999999854876464688765617779999999999986399831
No 118
>>1kqp_A NAD+ synthase;, NH(3)-dependent NAD(+) synthetase; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} (A:15-212)
Probab=27.84 E-value=38 Score=14.29 Aligned_cols=76 Identities=7% Similarity=0.110 Sum_probs=50.7
Q ss_pred HHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHC-----CCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEE
Q ss_conf 588888785077762376336547889999999998612-----686499996113588861289999998579613324
Q gi|254780368|r 69 EEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKK-----ENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFV 143 (249)
Q Consensus 69 ~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~-----~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v 143 (249)
.+.+|+.+.....+-+.|.-..|.|+...+..+.+.... ..+..+...........-+....+++.+|+++--..
T Consensus 12 ~~~i~~~~~~~~~~~v~v~~SGG~DS~vll~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~lg~~~~i~~ 91 (198)
T 1kqp_A 12 VNFLKQYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVESIREEGGDAQFIAVRLPHGTQQDEDDAQLALKFIKPDKSWKF 91 (198)
T ss_dssp HHHHHHHHHHHTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSSSCTTHHHHHHHHHHHCCSEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE
T ss_conf 99999999996899199979888889999999999999887606885799994587664068899999987266651686
Q ss_pred E
Q ss_conf 4
Q gi|254780368|r 144 S 144 (249)
Q Consensus 144 ~ 144 (249)
.
T Consensus 92 ~ 92 (198)
T 1kqp_A 92 D 92 (198)
T ss_dssp C
T ss_pred C
T ss_conf 2
No 119
>>3giw_A Protein of unknown function DUF574; NP_823353.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis ma-4680} PDB: 3go4_A* (A:)
Probab=27.64 E-value=39 Score=14.27 Aligned_cols=63 Identities=13% Similarity=0.100 Sum_probs=23.2
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCC-CCCHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 852899997141015888887850777623763365-478899999999986126864999961
Q gi|254780368|r 55 ATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNE-TLEPLSIAKILREIVKKENPIIVIAGK 117 (249)
Q Consensus 55 g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~-~~D~~~~A~~La~~i~~~~~DLIl~G~ 117 (249)
+++|+++-..+...+.+-+.+-..|.++.-.+..+- ....+..+....--.....||+|+|..
T Consensus 105 ~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~~fD~v~~~~ 168 (277)
T 3giw_A 105 ESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADXLDPASILDAPELRDTLDLTRPVALTVIA 168 (277)
T ss_dssp TCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEES
T ss_pred CCEEEEEECCHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHCCHHHHCCCCCCCCEEEEEEE
T ss_conf 9679999483777999999853278884589722435856540214553457866763565555
No 120
>>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B (A:155-399)
Probab=27.58 E-value=39 Score=14.26 Aligned_cols=72 Identities=13% Similarity=0.016 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCC----EEE-ECC-----CCCCHHHHHHHHHHHHH--C
Q ss_conf 68999999998559985289999714101588888785077762----376-336-----54788999999999861--2
Q gi|254780368|r 40 EIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRG----ILI-ESN-----ETLEPLSIAKILREIVK--K 107 (249)
Q Consensus 40 ~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~a----i~i-~d~-----~~~D~~~~A~~La~~i~--~ 107 (249)
-.||+.|+.+-.. .||+|.+++-|++... .|.-.. -.. ++. ..+..+-. -|+.... .
T Consensus 120 g~Al~~a~~ll~~-~gGkIi~f~~g~p~~G--------~G~l~~~~~~~~~~~~~~~~~~~~~~~fY~--~la~~~~~~~ 188 (245)
T 3eh1_A 120 GPALQAAFKLMSP-TGGRVSVFQTQLPSLG--------AGLLQSREDPNQRSSTKVVQHLGPATDFYK--KLALDCSGQQ 188 (245)
T ss_dssp HHHHHHHHHHHTT-TCEEEEEEECSCCCSS--------TTCCCCCCCSCGGGGSSSCTTCSCSCSHHH--HHHHHHHHTT
T ss_pred HHHHHHHHHHHHH-CCCEEEEEECCCCCCC--------CCEEECCCCCCCCCCHHHHHHHHHHHHHHH--HHHHHHHHCC
T ss_conf 9999999998884-3987999946899778--------972333667555686346654324779999--9999999759
Q ss_pred CCCCEEEEEECCCCC
Q ss_conf 686499996113588
Q gi|254780368|r 108 ENPIIVIAGKQTTDN 122 (249)
Q Consensus 108 ~~~DLIl~G~~S~D~ 122 (249)
...|+.+++.+..|-
T Consensus 189 isvdif~~~~~~~dl 203 (245)
T 3eh1_A 189 TAVDLFLLSSQYSDL 203 (245)
T ss_dssp EEEEEEECCSSCCCH
T ss_pred CEEEEEEECCCCCCH
T ss_conf 669999954876784
No 121
>>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, alternative splicing, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* (A:159-289)
Probab=27.36 E-value=39 Score=14.24 Aligned_cols=60 Identities=13% Similarity=0.178 Sum_probs=33.5
Q ss_pred HHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 99999855998528999971410158888878507776237633654788999999999861268649999
Q gi|254780368|r 45 ESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKKENPIIVIA 115 (249)
Q Consensus 45 ~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~~DLIl~ 115 (249)
.++|+.-. .|.+|++++-. ++-+..+..+|+|..+...++... ..+.......++|.|++
T Consensus 20 ~~iqla~~-~g~~vi~~~~~----~~~~~~~~~~ga~~~i~~~~~~~~------~~~~~~~~~~~~d~v~~ 79 (131)
T 2j8z_A 20 AAIQLTRM-AGAIPLVTAGS----QKKLQMAEKLGAAAGFNYKKEDFS------EATLKFTKGAGVNLILD 79 (131)
T ss_dssp HHHHHHHH-TTCEEEEEESC----HHHHHHHHHHTCSEEEETTTSCHH------HHHHHHTTTSCEEEEEE
T ss_pred EEEECCCC-CCCCCEEEEEC----HHHHHHHHHHCCCEEECCCCCCHH------HHHHHHHCCCCCEEEEE
T ss_conf 02341123-24442699810----454445665133113202452168------99999857998379997
No 122
>>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} (A:259-455)
Probab=27.24 E-value=39 Score=14.23 Aligned_cols=89 Identities=12% Similarity=0.128 Sum_probs=44.1
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEEECCCCC-CCEEHHHHHHHHHCCCCEEEEEEEE-ECCCE-EEEEEECCCCEEEE-E-
Q ss_conf 889999999998612686499996113588-8612899999985796133244334-32865-99998358967999-9-
Q gi|254780368|r 93 EPLSIAKILREIVKKENPIIVIAGKQTTDN-ESNQTGQMLAALMRWPQATFVSNIK-IIDNH-AIVTREVGHGTMTM-E- 167 (249)
Q Consensus 93 D~~~~A~~La~~i~~~~~DLIl~G~~S~D~-~~g~v~~~lA~~Lg~p~vt~v~~i~-~~~~~-~~v~r~~e~g~e~v-~- 167 (249)
++.++. .+++.+++-.-=+|++|..+... +.+.---.+|+.+|+|.++....-. +.+.. ..+-.....|.... +
T Consensus 17 ~~~~i~-~~~~~L~~A~rPvii~G~~~~~~~~a~~~l~~lae~~~ipv~~t~~~kg~~~~~~p~~~G~~G~~~~~~~~~~ 95 (197)
T 1t9b_A 17 VMQSIN-KAADLINLAKKPVLYVGAGILNHADGPRLLKELSDRAQIPVTTTLQGLGSFDQEDPKSLDMLGMHGCATANLA 95 (197)
T ss_dssp HHHHHH-HHHHHHHTCSSEEEEECGGGGGSTTHHHHHHHHHHHTTCCEEECGGGTTSSCTTSTTEEEECSTTSCHHHHHH
T ss_pred CHHHHH-HHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHCCCCCHHHHHHH
T ss_conf 689999-9999998377987983266430046899999998721412798666677668756401221454235889987
Q ss_pred -ECCCEEEEEECCCCC
Q ss_conf -639889998435565
Q gi|254780368|r 168 -TPLPAVITVDLNLNE 182 (249)
Q Consensus 168 -~~lPavisv~~~~n~ 182 (249)
-.-=++|.+....+.
T Consensus 96 i~~aDlil~iG~~~~~ 111 (197)
T 1t9b_A 96 VQNADLIIAVGARFDD 111 (197)
T ss_dssp HHHCSEEEEESCCCCT
T ss_pred HCCCCEEEEECCCCCC
T ss_conf 7159989998997774
No 123
>>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} (A:184-315)
Probab=26.96 E-value=40 Score=14.19 Aligned_cols=67 Identities=12% Similarity=0.054 Sum_probs=39.1
Q ss_pred CCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEE-ECCCEEEEEEECCCCEEEEEECCCEEEEEECCC
Q ss_conf 864999961135888612899999985796133244334-328659999835896799996398899984355
Q gi|254780368|r 109 NPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIK-IIDNHAIVTREVGHGTMTMETPLPAVITVDLNL 180 (249)
Q Consensus 109 ~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~-~~~~~~~v~r~~e~g~e~v~~~lPavisv~~~~ 180 (249)
.-=+|++|....-.+...---.+|+.+|+|.++.-..-. +.++. ...-|....-..--+++.+....
T Consensus 14 ~rPvii~G~g~~~~~~~~~l~~lae~~~iPv~~t~~~kg~~~~~~-----p~~~G~~g~~~~aDlil~vG~~~ 81 (132)
T 1efv_A 14 AKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPN-----DMQVGQTGKIVAPELYIAVGISG 81 (132)
T ss_dssp CSEEEEECGGGCSTGGGHHHHHHHHHHTCEEEECHHHHHTTSSCG-----GGBBSTTSBCCCCSEEEEESCCC
T ss_pred CCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHCCCCCCCC-----HHHCCCCCCCCCCCEEEEECCCC
T ss_conf 758998677617888999999999986991897474430789991-----76406678524888999976257
No 124
>>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.80A {Aeropyrum pernix K1} (A:)
Probab=26.74 E-value=40 Score=14.17 Aligned_cols=16 Identities=6% Similarity=-0.039 Sum_probs=6.9
Q ss_pred HHCCCCCEEEEEECCC
Q ss_conf 6126864999961135
Q gi|254780368|r 105 VKKENPIIVIAGKQTT 120 (249)
Q Consensus 105 i~~~~~DLIl~G~~S~ 120 (249)
++...||+|++-.+-.
T Consensus 65 ~~~~~~DlvllD~~mP 80 (161)
T 2yxb_A 65 AVQEDVDVIGVSILNG 80 (161)
T ss_dssp HHHTTCSEEEEEESSS
T ss_pred HHHCCCCEEEEECCCC
T ss_conf 9865996899863654
No 125
>>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406} (A:)
Probab=26.52 E-value=40 Score=14.14 Aligned_cols=101 Identities=12% Similarity=0.113 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEEEECCCH-----HHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCC--CC
Q ss_conf 36899999999855998528999971410-----158888878507776237633654788999999999861268--64
Q gi|254780368|r 39 DEIALEESLQLREKGIATEVIVVSIGSCK-----VEEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKKEN--PI 111 (249)
Q Consensus 39 D~~AlE~Al~lke~~~g~~V~~lsvG~~~-----~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~--~D 111 (249)
-+.+.+..-..++ .|-+|..-.+...+ ..+..+.+..+|+|...+.+.-..+.|..++..+...-+... ++
T Consensus 121 ~~~~~~~i~~a~~--~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~p~ 198 (325)
T 3eeg_A 121 LEXAVAAVKQAKK--VVHEVEFFCEDAGRADQAFLARXVEAVIEAGADVVNIPDTTGYXLPWQYGERIKYLXDNVSNIDK 198 (325)
T ss_dssp GGTTHHHHHHHHT--TSSEEEEEEETGGGSCHHHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGG
T ss_pred HHHHHHHHHHHHH--HCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCEECHHHHHHHHHHHHHHCCCCC
T ss_conf 9999999998876--05324423565443069999999999998499899951556655311678899999873048886
Q ss_pred EEEEEECCCCCCCEEHHHHHHHHHCCCCEE
Q ss_conf 999961135888612899999985796133
Q gi|254780368|r 112 IVIAGKQTTDNESNQTGQMLAALMRWPQAT 141 (249)
Q Consensus 112 LIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt 141 (249)
+.+.=.-.-|.+.+.--.+.|-..|.-.+.
T Consensus 199 ~~i~~H~Hnd~Gla~An~l~A~~aGa~~vd 228 (325)
T 3eeg_A 199 AILSAHCHNDLGLATANSLAALQNGARQVE 228 (325)
T ss_dssp SEEEECBCCTTSCHHHHHHHHHHHTCCEEE
T ss_pred CEEEEEECCCCCCHHHHHHHHHHCCCCEEC
T ss_conf 247887546456546889999964741323
No 126
>>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone, THDP, metal, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A* (A:196-343)
Probab=26.43 E-value=38 Score=14.35 Aligned_cols=28 Identities=21% Similarity=0.559 Sum_probs=11.0
Q ss_pred EEEEEECCCCCCCEEHHHHHHHHHCCCCEE
Q ss_conf 999961135888612899999985796133
Q gi|254780368|r 112 IVIAGKQTTDNESNQTGQMLAALMRWPQAT 141 (249)
Q Consensus 112 LIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt 141 (249)
+|+.|..+.+ .++.--.+|+.+|||.++
T Consensus 28 viv~G~g~~~--a~~~l~~lae~~~~pv~~ 55 (148)
T 3hww_A 28 VVVAGRMSAE--EGKKVALWAQTLGWPLIG 55 (148)
T ss_dssp EEEECBCCHH--HHHHHHHHHHHHTCCEEE
T ss_pred EEEEECCCHH--HHHHHHHHHHHCCCCEEE
T ss_conf 7874034425--689998767640476011
No 127
>>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} (A:1-132)
Probab=26.39 E-value=41 Score=14.13 Aligned_cols=71 Identities=10% Similarity=0.172 Sum_probs=32.5
Q ss_pred HHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEE
Q ss_conf 888887850777623763365478899999999986126864999961135888612899999985796133
Q gi|254780368|r 70 EVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQAT 141 (249)
Q Consensus 70 ~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt 141 (249)
+.+++.....-++.+.+.-..|.|+...+..+.+.... ..-.+++........+-.....+|+.||+|+..
T Consensus 14 ~~i~~~~~~~~~~~v~v~~SGG~DS~~~~~ll~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~a~~l~i~~~~ 84 (132)
T 1xng_A 14 DFLEKEVQKRGFKKVVYGLSGGLDSAVVGVLCQKVFKE-NAHALLMPSSVSMPENKTDALNLCEKFSIPYTE 84 (132)
T ss_dssp HHHHHHHHHTTCCCEEEECCSSHHHHHHHHHHHHHHGG-GEEEEECCCSSSCHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHH-CCEEEECCCCCCCCHHHHHHHHHHHHHHCCCEE
T ss_conf 99999999819982999787888999999999986243-307872253015611336799999985313400
No 128
>>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii OT3} (A:51-160,A:311-325)
Probab=26.17 E-value=41 Score=14.10 Aligned_cols=64 Identities=19% Similarity=0.236 Sum_probs=26.7
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCC-CEEEEEECC
Q ss_conf 85289999714101588888785077762376336547889999999998612686-499996113
Q gi|254780368|r 55 ATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKKENP-IIVIAGKQT 119 (249)
Q Consensus 55 g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~~-DLIl~G~~S 119 (249)
|-+.+++.-.......-+...-++||+ .+++..+...+....+..+...+..... -.++.|-.|
T Consensus 45 G~~~~iv~p~~~~~~~k~~~~~~~GA~-V~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~i~g~gT 109 (125)
T 1j0a_A 45 GLDAILVLRGKEELKGNYLLDKIMGIE-TRVYDAKDSFELMKYAEEIAEELKREGRKPYVIPPGGA 109 (125)
T ss_dssp TCEEEEEEESCCCSCHHHHHHHHTTCE-EEEESCCSTTTHHHHHHHHHHHHTTSSCCEEEECGGGC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCC-EEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 786799981885156799999973673-79742554320467899999998754597299457887
No 129
>>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, GMP reductase domain, structural genomics; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032} (A:38-393)
Probab=26.00 E-value=41 Score=14.08 Aligned_cols=11 Identities=0% Similarity=0.054 Sum_probs=4.4
Q ss_pred CCCCEEEEEEC
Q ss_conf 68649999611
Q gi|254780368|r 108 ENPIIVIAGKQ 118 (249)
Q Consensus 108 ~~~DLIl~G~~ 118 (249)
.+.|++.....
T Consensus 140 ~~~~~~~~~~~ 150 (356)
T 2qr6_A 140 AGADLLVIQGT 150 (356)
T ss_dssp TTCSEEEEECS
T ss_pred CCCCEEEEECE
T ss_conf 48762453020
No 130
>>3f6c_A Positive transcription regulator EVGA; structural genomics, , PSI-2, protein structure initiative; 1.45A {Escherichia coli k-12} (A:)
Probab=25.97 E-value=41 Score=14.08 Aligned_cols=67 Identities=13% Similarity=0.058 Sum_probs=44.1
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHC
Q ss_conf 2601368999999998559985289999714101588888785077762376336547889999999998612
Q gi|254780368|r 35 MNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKK 107 (249)
Q Consensus 35 in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~ 107 (249)
++-.+.+.+|..-+++.......|.++|.- ......++++..||+. |+. .+.++-..-.++..+.+.
T Consensus 54 ~~lP~~~G~el~~~i~~~~~~~~iiils~~--~~~~~~~~a~~~Ga~~-yl~---Kp~~~~~L~~ai~~~~~g 120 (134)
T 3f6c_A 54 VDIPGVNGIQVLETLRKRQYSGIIIIVSAK--NDHFYGKHCADAGANG-FVS---KKEGMNNIIAAIEAAKNG 120 (134)
T ss_dssp TTCSSSCHHHHHHHHHHTTCCSEEEEEECC-----CTHHHHHHTTCSE-EEE---GGGCTHHHHHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHHHHHCCCCEEEEEECC--CCHHHHHHHHHCCCCE-EEE---CCCCHHHHHHHHHHHHCC
T ss_conf 999999769999999974999819999688--9999999999879989-997---989999999999999879
No 131
>>1a2o_A CHEB methylesterase; bacterial chemotaxis, adaptation, serine hydrolase; 2.40A {Salmonella typhimurium} (A:1-144)
Probab=25.65 E-value=42 Score=14.04 Aligned_cols=70 Identities=20% Similarity=0.132 Sum_probs=47.4
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECC--CCCCHHHHHHHHHHHHH
Q ss_conf 2601368999999998559985289999714101588888785077762376336--54788999999999861
Q gi|254780368|r 35 MNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESN--ETLEPLSIAKILREIVK 106 (249)
Q Consensus 35 in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~--~~~D~~~~A~~La~~i~ 106 (249)
++-.|...+|..-+|++.. ...++.++.......+...+|+.+||+. |++... ....-.+.++.+....+
T Consensus 57 ~~mP~~dG~el~~~ir~~~-~~~~iii~~~~~~~~~~~~~al~~Ga~d-yl~KP~~~~~~~~~~~~~~l~~~~~ 128 (144)
T 1a2o_A 57 VEMPRMDGLDFLEKLMRLR-PMPVVMVSSLTGKGSEVTLRALELGAID-FVTKPQLGIREGMLAYSEMIAEKVR 128 (144)
T ss_dssp CCCSSSCHHHHHHHHHHSS-CCCEEEEECCTHHHHHHHHHHHHHTCCE-EEECSSSSCSSCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHCC-CCCCEEEEEEECCCHHHHHHHHHCCCCE-EEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9789999899999776438-8870489998403237777998678518-9978832255679999998877888
No 132
>>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural genomics, NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} (A:104-162)
Probab=25.65 E-value=40 Score=14.14 Aligned_cols=21 Identities=24% Similarity=0.352 Sum_probs=16.2
Q ss_pred HHHHHHHHHHCCCCCEEEECC
Q ss_conf 588888785077762376336
Q gi|254780368|r 69 EEVLKNSLAMGADRGILIESN 89 (249)
Q Consensus 69 ~~~Lr~alAmGaD~ai~i~d~ 89 (249)
.-+.++|...|+|+|+++..+
T Consensus 31 vla~~eA~~~G~deai~ld~~ 51 (59)
T 2zgi_A 31 RLALEEARKEGAFEGLLLDAF 51 (59)
T ss_dssp HHHHHHHHTTTCSEEEEECTT
T ss_pred HHHHHHHCCCCCCEEEEECCC
T ss_conf 888987503543000033355
No 133
>>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* (A:137-268)
Probab=25.28 E-value=43 Score=14.00 Aligned_cols=60 Identities=17% Similarity=0.116 Sum_probs=33.1
Q ss_pred HHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 99999855998528999971410158888878507776237633654788999999999861268649999
Q gi|254780368|r 45 ESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKKENPIIVIA 115 (249)
Q Consensus 45 ~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~~DLIl~ 115 (249)
.++|+... .|.+|++++-. ++.+..+..+|+|+.+...+.. .. ..+.+.....++|+++.
T Consensus 20 ~~iqlak~-~g~~vi~~~~~----~~~~~~~~~~ga~~~i~~~~~~---~~---~~i~~~~~~~~~d~v~d 79 (132)
T 3jyn_A 20 LACQWAKA-LGAKLIGTVSS----PEKAAHAKALGAWETIDYSHED---VA---KRVLELTDGKKCPVVYD 79 (132)
T ss_dssp HHHHHHHH-HTCEEEEEESS----HHHHHHHHHHTCSEEEETTTSC---HH---HHHHHHTTTCCEEEEEE
T ss_pred HHHHHHHH-CCCEEEEEECC----HHHHHHHHHCCCCEEEECCCCC---HH---HHHHHHHCCCCCCEEEE
T ss_conf 99999998-69989999387----7889999975998999799988---99---99999718999538998
No 134
>>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA; 1.70A {Aquifex aeolicus VF5} PDB: 2qq1_A 2f7w_A 2f7y_A 2fuw_A (A:)
Probab=24.67 E-value=44 Score=13.93 Aligned_cols=79 Identities=16% Similarity=0.091 Sum_probs=53.0
Q ss_pred CEEEEEECCCHH--------HHHHHHHH-HHCCC-CCEE---EECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
Q ss_conf 289999714101--------58888878-50777-6237---63365478899999999986126864999961135888
Q gi|254780368|r 57 EVIVVSIGSCKV--------EEVLKNSL-AMGAD-RGIL---IESNETLEPLSIAKILREIVKKENPIIVIAGKQTTDNE 123 (249)
Q Consensus 57 ~V~~lsvG~~~~--------~~~Lr~al-AmGaD-~ai~---i~d~~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~ 123 (249)
++-+++.|.+-. ...|+..| ..|.+ +.+. +.| |+-.+.++|.+.+...++|+|++.-.++=+.
T Consensus 7 rv~vi~~GdEi~~G~~~d~n~~~l~~~l~~~G~~v~~i~~~iv~D----d~~~I~~~i~~~~~~~~~dliittGG~g~~~ 82 (178)
T 2pbq_A 7 VIGVVTISDRASKGIYEDISGKAIIDYLKDVIITPFEVEYRVIPD----ERDLIEKTLIELADEKGCSLILTTGGTGPAP 82 (178)
T ss_dssp EEEEEEECHHHHHTSSCCHHHHHHHHHHHHHBCSCCEEEEEEECS----CHHHHHHHHHHHHHTSCCSEEEEESCCSSST
T ss_pred EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCC----HHHHHHHHHHHHHHHCCCEEEEEECCCCCCC
T ss_conf 699999476643688858679999999998279874898883486----7999999999988732861999713445564
Q ss_pred CEEHHHHHHHHHCCCC
Q ss_conf 6128999999857961
Q gi|254780368|r 124 SNQTGQMLAALMRWPQ 139 (249)
Q Consensus 124 ~g~v~~~lA~~Lg~p~ 139 (249)
.-.++..+++..+-++
T Consensus 83 ~D~t~~~~~~~~~~~l 98 (178)
T 2pbq_A 83 RDVTPEATEAVCEKML 98 (178)
T ss_dssp TCCHHHHHHHHCSEEC
T ss_pred CCCHHHHHHHHHCCCC
T ss_conf 1207999976423147
No 135
>>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum} (A:)
Probab=24.62 E-value=44 Score=13.92 Aligned_cols=74 Identities=19% Similarity=0.204 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCC------------CCCHHHHHHHHHHHHH
Q ss_conf 3689999999985599852899997141015888887850777623763365------------4788999999999861
Q gi|254780368|r 39 DEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNE------------TLEPLSIAKILREIVK 106 (249)
Q Consensus 39 D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~------------~~D~~~~A~~La~~i~ 106 (249)
...-.+.-..+++.. ++.+++-.++. .+.-+++...|+|- |.+...+ +.........+.++..
T Consensus 169 ~~~~~~~i~~~~~~~-~~~~v~~~v~~---~~~a~~~~~~GaD~-Ivv~g~~ggg~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (400)
T 3ffs_A 169 SLNIIRTLKEIKSKM-NIDVIVGNVVT---EEATKELIENGADG-IKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVAS 243 (400)
T ss_dssp BHHHHHHHHHHHTTC-CCEEEEEEECS---HHHHHHHHHTTCSE-EEECC---------CCSCBCCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHC-CCCEEEEECCC---HHHHHHHHHCCCCE-EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 046889999988637-98689951378---99999999839970-35401147444554214767237899999999997
Q ss_pred CCCCCEEEEEE
Q ss_conf 26864999961
Q gi|254780368|r 107 KENPIIVIAGK 117 (249)
Q Consensus 107 ~~~~DLIl~G~ 117 (249)
..+.-+|..|-
T Consensus 244 ~~~ipiiaaGG 254 (400)
T 3ffs_A 244 KFGIPIIADGG 254 (400)
T ss_dssp TTTCCEEEESC
T ss_pred HCCCCEEECCC
T ss_conf 65997894488
No 136
>>1m1n_A Nitrogenase molybdenum-iron protein alpha chain; atomic resolution, FEMO cofactor, nitrogen fixation, central nitrogen ligand; HET: HCA CLF CFN; 1.16A {Azotobacter vinelandii} (A:1-55,A:299-491)
Probab=24.23 E-value=44 Score=13.87 Aligned_cols=86 Identities=15% Similarity=0.131 Sum_probs=48.3
Q ss_pred HHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCC------------CCCHH----HHHHHHHHHHHCCCC
Q ss_conf 99985599852899997141015888887850777623763365------------47889----999999998612686
Q gi|254780368|r 47 LQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNE------------TLEPL----SIAKILREIVKKENP 110 (249)
Q Consensus 47 l~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~------------~~D~~----~~A~~La~~i~~~~~ 110 (249)
...++.. .|+-.++..|+..+-...+-.--+|..=........ +.++. ....-+.+.+++.++
T Consensus 96 ~~~~~~l-~Gkrv~I~~~~~~~~~~~~~l~ELGm~vv~~~~~~~~~~~~~~~~~~l~~~~~i~dd~d~~E~~~~i~~~~P 174 (248)
T 1m1n_A 96 AKYRPRL-EGKRVMLYIGGLRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKEMGDSTLLYDDVTGYEFEEFVKRIKP 174 (248)
T ss_dssp HHHHHHH-TTCEEEECBSSSHHHHTHHHHHTTTCEEEEEEESSCCHHHHHTTTTTSCTTCEEEESCBHHHHHHHHHHHCC
T ss_pred HHHHHHH-CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHCCC
T ss_conf 9999871-798367736851179999999987997999970578778999999867998789738999999999985399
Q ss_pred CEEEEEECCCCCCCEEHHHHHHHHHCCCCEEE
Q ss_conf 49999611358886128999999857961332
Q gi|254780368|r 111 IIVIAGKQTTDNESNQTGQMLAALMRWPQATF 142 (249)
Q Consensus 111 DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~ 142 (249)
||||.|- -.-.++..+|+|++..
T Consensus 175 DLi~g~~---------~ek~~a~k~giP~~~~ 197 (248)
T 1m1n_A 175 DLIGSGI---------KEKFIFQKMGIPFREM 197 (248)
T ss_dssp SEEEECH---------HHHHHHHHTTCCEEES
T ss_pred CEEEECC---------CHHHHHHHCCCCEEEC
T ss_conf 9999898---------4079999829997007
No 137
>>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA; 2.30A {Thermus thermophilus HB8} (A:149-293)
Probab=24.19 E-value=45 Score=13.87 Aligned_cols=62 Identities=19% Similarity=0.250 Sum_probs=36.3
Q ss_pred HHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 9999999855998528999971410158888878507776237633654788999999999861268649999
Q gi|254780368|r 43 LEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKKENPIIVIA 115 (249)
Q Consensus 43 lE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~~DLIl~ 115 (249)
.-.+++++-. .|.+|+++.- .++-++.+..+|+|..+...+... ...+.+.....++|+|++
T Consensus 32 g~~~~~la~~-~g~~vi~~~~----~~~~~~~~~~~ga~~~i~~~~~~~------~~~~~~~~~~~~~~vv~~ 93 (145)
T 2eih_A 32 SVAAIQIAKL-FGARVIATAG----SEDKLRRAKALGADETVNYTHPDW------PKEVRRLTGGKGADKVVD 93 (145)
T ss_dssp HHHHHHHHHH-TTCEEEEEES----SHHHHHHHHHHTCSEEEETTSTTH------HHHHHHHTTTTCEEEEEE
T ss_pred HHHHHHHHHH-CCCEEEEEEC----CHHHHHHHHHCCCCEEEECCCCCH------HHHHHHHHCCCCCEEEEE
T ss_conf 9999999998-7998999979----999999999659989997999999------999999848987469996
No 138
>>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structural genomics, NPPSFA; 1.64A {Thermus thermophilus HB8} (A:)
Probab=23.99 E-value=45 Score=13.84 Aligned_cols=79 Identities=16% Similarity=0.173 Sum_probs=50.1
Q ss_pred CEEEEEECCCHH--------HHHHHHHH-HHCCCC--CEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCE
Q ss_conf 289999714101--------58888878-507776--2376336547889999999998612686499996113588861
Q gi|254780368|r 57 EVIVVSIGSCKV--------EEVLKNSL-AMGADR--GILIESNETLEPLSIAKILREIVKKENPIIVIAGKQTTDNESN 125 (249)
Q Consensus 57 ~V~~lsvG~~~~--------~~~Lr~al-AmGaD~--ai~i~d~~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g 125 (249)
++-++++|.+-. ...|+..| ..|.+= ...+.| |.-.++++|.+++.+.++|+|++--.++-+..-
T Consensus 3 rv~ii~~GdEl~~G~i~d~n~~~l~~~l~~~G~~v~~~~~v~D----d~~~i~~ai~~~~~~~~~dlvittGG~g~~~~D 78 (164)
T 2is8_A 3 RVGILTVSDKGFRGERQDTTHLAIREVLAGGPFEVAAYELVPD----EPPMIKKVLRLWADREGLDLILTNGGTGLAPRD 78 (164)
T ss_dssp EEEEEEECHHHHHTSSCCCHHHHHHHHHTTSSEEEEEEEEECS----CHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTC
T ss_pred EEEEEEECCCCCCCCEECCCHHHHHHHHHHCCCCEEEEEECCC----CHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCH
T ss_conf 9999995787604774565199999999977993368763366----488876578887750267588875157766541
Q ss_pred EHHHHHHHHHCCCC
Q ss_conf 28999999857961
Q gi|254780368|r 126 QTGQMLAALMRWPQ 139 (249)
Q Consensus 126 ~v~~~lA~~Lg~p~ 139 (249)
.++..+++..+-+.
T Consensus 79 ~t~~~i~~~~~~~l 92 (164)
T 2is8_A 79 RTPEATRELLDREV 92 (164)
T ss_dssp CHHHHHHTTCSEEC
T ss_pred HHHHHHHHHCCCCC
T ss_conf 58899998636024
No 139
>>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} (A:143-315)
Probab=23.88 E-value=45 Score=13.83 Aligned_cols=73 Identities=15% Similarity=0.090 Sum_probs=40.6
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 26013689999999985599852899997141015888887850777623763365478899999999986126864999
Q gi|254780368|r 35 MNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKKENPIIVI 114 (249)
Q Consensus 35 in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~~DLIl 114 (249)
++..--..+ .|+|+.-. .|.+|++++.. .+.+..+..+|+|..+...+.... . .........-...++|+||
T Consensus 32 I~GaG~vG~-~a~qla~~-~G~~vi~v~~~----~~~~~~~~~lGa~~~i~~~~~~~~-~-~~~~~~~~~~~~~g~d~v~ 103 (173)
T 1e3j_A 32 VIGAGPIGL-VSVLAAKA-YGAFVVCTARS----PRRLEVAKNCGADVTLVVDPAKEE-E-SSIIERIRSAIGDLPNVTI 103 (173)
T ss_dssp EECCSHHHH-HHHHHHHH-TTCEEEEEESC----HHHHHHHHHTTCSEEEECCTTTSC-H-HHHHHHHHHHSSSCCSEEE
T ss_pred EECCCCCHH-HHHHHHHH-CCCEEEEEECC----HHHHHHHHHCCCCEEEECCCCCCC-H-HHHHHHHHHHCCCCCCEEE
T ss_conf 989873045-89999998-79989999688----899999997399989975887423-7-8999999863388763999
Q ss_pred E
Q ss_conf 9
Q gi|254780368|r 115 A 115 (249)
Q Consensus 115 ~ 115 (249)
-
T Consensus 104 d 104 (173)
T 1e3j_A 104 D 104 (173)
T ss_dssp E
T ss_pred E
T ss_conf 8
No 140
>>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B* (B:)
Probab=23.82 E-value=25 Score=15.52 Aligned_cols=79 Identities=5% Similarity=-0.017 Sum_probs=39.6
Q ss_pred CCCCEEEEEECCC-HHHHHHHHHHHH-CCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHH
Q ss_conf 9852899997141-015888887850-77762376336547889999999998612686499996113588861289999
Q gi|254780368|r 54 IATEVIVVSIGSC-KVEEVLKNSLAM-GADRGILIESNETLEPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQML 131 (249)
Q Consensus 54 ~g~~V~~lsvG~~-~~~~~Lr~alAm-GaD~ai~i~d~~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~l 131 (249)
.+....++-+... ...+.++..|.. | ....|.. +. |. ..+|.....+..||+|++..+=.|.+.-.+--.+
T Consensus 10 ~~~~~~iLiVDD~~~~~~~l~~~L~~~~--~~~~v~~-a~-~g---~eAl~~l~~~~~~Dlii~D~~mP~~dG~el~~~i 82 (145)
T 3kyj_B 10 HGSPYNVMIVDDAAMMRLYIASFIKTLP--DFKVVAQ-AA-NG---QEALDKLAAQPNVDLILLDIEMPVMDGMEFLRHA 82 (145)
T ss_dssp -CCSEEEEEECSCHHHHHHHHHHHTTCT--TEEEEEE-ES-SH---HHHHHHHHHCTTCCEEEECTTSCCCTTCHHHHHH
T ss_pred CCCCCEEEEEECCHHHHHHHHHHHHHCC--CCEEEEE-EC-CH---HHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHH
T ss_conf 9987789999798999999999998589--9469999-89-99---9999999837999899982899999999999999
Q ss_pred HHHHCCCC
Q ss_conf 99857961
Q gi|254780368|r 132 AALMRWPQ 139 (249)
Q Consensus 132 A~~Lg~p~ 139 (249)
-+...+|.
T Consensus 83 r~~~~~~i 90 (145)
T 3kyj_B 83 KLKTRAKI 90 (145)
T ss_dssp HHHCCCEE
T ss_pred HHCCCCCE
T ss_conf 85699691
No 141
>>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} (D:189-320)
Probab=23.80 E-value=42 Score=14.06 Aligned_cols=43 Identities=12% Similarity=-0.021 Sum_probs=30.4
Q ss_pred HHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEE
Q ss_conf 9861268649999611358886128999999857961332443
Q gi|254780368|r 103 EIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSN 145 (249)
Q Consensus 103 ~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~ 145 (249)
+.+++-.-=+|++|....-.+...---.+|+.+|+|.++.-..
T Consensus 8 ~~l~~AkrPvii~G~g~~~~~~~~~i~~lae~~g~pv~~t~~~ 50 (132)
T 1o97_D 8 DIDITTVDFIMSIGRGIGEETNVEQFRELADEAGATLCCSRPI 50 (132)
T ss_dssp CCCCSCSSEEEEECGGGCSGGGHHHHHHHHHHHTCEEEECHHH
T ss_pred CCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEECHHH
T ss_conf 6666666448981676677004789999999849833225868
No 142
>>2okg_A Central glycolytic gene regulator; alpha/beta/alpha sandwich, rossmann-like fold, structural genomics, PSI-2, protein structure initiative; HET: MSE G3H; 1.65A {Bacillus subtilis} (A:)
Probab=23.20 E-value=42 Score=14.02 Aligned_cols=10 Identities=10% Similarity=0.235 Sum_probs=4.3
Q ss_pred CCCEEEEEEC
Q ss_conf 8649999611
Q gi|254780368|r 109 NPIIVIAGKQ 118 (249)
Q Consensus 109 ~~DLIl~G~~ 118 (249)
++|++++|..
T Consensus 148 ~~Diai~GiG 157 (255)
T 2okg_A 148 SASXLVHGIG 157 (255)
T ss_dssp TCSEEEECCE
T ss_pred CCCEEEEECC
T ss_conf 7999999467
No 143
>>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A (A:1-192,A:357-375)
Probab=22.70 E-value=48 Score=13.68 Aligned_cols=105 Identities=11% Similarity=0.089 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEE--ECCCCC---CHHHHHHHHHHHHHCCCCCEE
Q ss_conf 368999999998559985289999714101588888785077762376--336547---889999999998612686499
Q gi|254780368|r 39 DEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILI--ESNETL---EPLSIAKILREIVKKENPIIV 113 (249)
Q Consensus 39 D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i--~d~~~~---D~~~~A~~La~~i~~~~~DLI 113 (249)
...+....-+|++.. ....+.++.+.......-+.-...|..-...+ ...... -+...-..+...+++..||+|
T Consensus 21 ~~~~~~li~~L~~~~-~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~kPD~V 99 (211)
T 3beo_A 21 AIKMAPLVLELQKHP-EKIESIVTVTAQHRQMLDQVLSIFGITPDFDLNIMKDRQTLIDITTRGLEGLDKVMKEAKPDIV 99 (211)
T ss_dssp HHHHHHHHHHHTTCT-TTEEEEEEECCSSSHHHHHHHHHHTCCCSEECCCCCTTCCHHHHHHHHHHHHHHHHHHHCCSEE
T ss_pred HHHHHHHHHHHHHCC-CCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 999999999998387-8988899991687899999999719998811105889977999999999988998874475504
Q ss_pred EEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEE
Q ss_conf 9961135888612899999985796133244334
Q gi|254780368|r 114 IAGKQTTDNESNQTGQMLAALMRWPQATFVSNIK 147 (249)
Q Consensus 114 l~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~ 147 (249)
+.. .|........+.|..+|+|.+..-....
T Consensus 100 ~v~---~~~~~~l~~~laA~~~~IPvv~~~~~~~ 130 (211)
T 3beo_A 100 LVH---GDTTTTFIASLAAFYNQIPVGHVEAGLR 130 (211)
T ss_dssp EEE---TTSHHHHHHHHHHHHTTCCEEEESCCCC
T ss_pred EEE---CCCCCCHHHHHHHHHCCCEEEEEECCCC
T ss_conf 420---1456420158888730631799852455
No 144
>>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} (A:)
Probab=22.61 E-value=48 Score=13.67 Aligned_cols=48 Identities=19% Similarity=0.020 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECC
Q ss_conf 1368999999998559985289999714101588888785077762376336
Q gi|254780368|r 38 FDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESN 89 (249)
Q Consensus 38 ~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~ 89 (249)
+++.....-.+++.+.....+.+-.+.. .+..+.+.--|+|- |.+...
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~ivvk~i~~---~~da~~a~~~g~d~-I~v~~~ 314 (503)
T 1me8_A 267 SEWQKITIGWIREKYGDKVKVGAGNIVD---GEGFRYLADAGADF-IKIGIG 314 (503)
T ss_dssp SHHHHHHHHHHHHHHGGGSCEEEEEECS---HHHHHHHHHHTCSE-EEECSS
T ss_pred HHHHHHHHHHHHHHCCCCCEECCCCCCC---HHHHHHHHHHCCCE-EEEECC
T ss_conf 5788999998775378862360686068---79999999838886-898415
No 145
>>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'- deoxyadenosine, radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} (B:1-94)
Probab=22.60 E-value=48 Score=13.67 Aligned_cols=33 Identities=24% Similarity=0.076 Sum_probs=23.9
Q ss_pred EECC-CHHHHHHHHHHHHHHCCCCCCEEEEEECC
Q ss_conf 3326-01368999999998559985289999714
Q gi|254780368|r 33 ISMN-PFDEIALEESLQLREKGIATEVIVVSIGS 65 (249)
Q Consensus 33 ~~in-~~D~~AlE~Al~lke~~~g~~V~~lsvG~ 65 (249)
+-+- |.++.|-|+|++|..+.+=.++.++++..
T Consensus 38 ftLPv~~~~~AeeAA~~la~KMGle~p~Vv~~~~ 71 (94)
T 1xrs_B 38 FTLPLKNNERSAEAAKQIALKMGLEEPSVVMQQS 71 (94)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTSSCCCEEEEEEE
T ss_pred HHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf 0054567288999999999973885531489875
No 146
>>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} (A:)
Probab=22.33 E-value=48 Score=13.64 Aligned_cols=29 Identities=17% Similarity=0.169 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCCCC
Q ss_conf 99999999861268649999611358886
Q gi|254780368|r 96 SIAKILREIVKKENPIIVIAGKQTTDNES 124 (249)
Q Consensus 96 ~~A~~La~~i~~~~~DLIl~G~~S~D~~~ 124 (249)
....++.++-+..+.++++-.+.+.|...
T Consensus 196 ~~~~ii~~vr~~~~~~~~vk~~~~~~~~~ 224 (336)
T 1f76_A 196 AIKNKQNDLQAXHHKYVPIAVKIAPDLSE 224 (336)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEECCSCCCH
T ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCH
T ss_conf 99999999997528763189995489998
No 147
>>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural genomics, joint center for structural genomics, JCSG; 2.18A {Thermotoga maritima MSB8} (A:)
Probab=22.14 E-value=49 Score=13.61 Aligned_cols=51 Identities=12% Similarity=0.129 Sum_probs=30.8
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCC
Q ss_conf 6013689999999985599852899997141015888887850777623763365
Q gi|254780368|r 36 NPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNE 90 (249)
Q Consensus 36 n~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~ 90 (249)
+-++.+-...-++++..+..+.+++-.++. -+.-+.|...|+|- |.|+..+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~---~~~a~~a~~~G~D~-i~v~~~~ 309 (494)
T 1vrd_A 259 HGHSRRVIETLEMIKADYPDLPVVAGNVAT---PEGTEALIKAGADA-VKVGVGP 309 (494)
T ss_dssp CCSSHHHHHHHHHHHHHCTTSCEEEEEECS---HHHHHHHHHTTCSE-EEECSSC
T ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEEECC---HHHHHHHHHHCCCE-EEECCCC
T ss_conf 531688999999999878998579876257---99999999728988-9854658
No 148
>>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, fatty acid synthesis (type 2), structural genomics; 1.75A {Homo sapiens} PDB: 2vcy_A (A:150-304)
Probab=21.84 E-value=49 Score=13.57 Aligned_cols=41 Identities=15% Similarity=0.189 Sum_probs=24.9
Q ss_pred HHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEE
Q ss_conf 999998559985289999714101588888785077762376
Q gi|254780368|r 45 ESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILI 86 (249)
Q Consensus 45 ~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i 86 (249)
.++|+.-. .|.++++++-..+..++.++.+...|+|..+.-
T Consensus 34 ~~i~la~~-~g~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~ 74 (155)
T 1zsy_A 34 AVIQIAAA-LGLRTINVVRDRPDIQKLSDRLKSLGAEHVITE 74 (155)
T ss_dssp HHHHHHHH-HTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEH
T ss_pred HHHHHHHC-CCCCCEEEECCCCCCCCHHHHHHCCCCCCCCCC
T ss_conf 54432101-343211441263101003555403333322222
No 149
>>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/proteomics initiative; HET: XMP; 2.10A {Pyrococcus horikoshii} (A:16-486)
Probab=21.58 E-value=50 Score=13.54 Aligned_cols=76 Identities=11% Similarity=0.149 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCC---------CCCHHHHHHHHHHHHHCC
Q ss_conf 13689999999985599852899997141015888887850777623763365---------478899999999986126
Q gi|254780368|r 38 FDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNE---------TLEPLSIAKILREIVKKE 108 (249)
Q Consensus 38 ~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~---------~~D~~~~A~~La~~i~~~ 108 (249)
++..-.+..-++|.. ..+.+.+..++.. +.-+.++..|+|..+...... +.-.......++++++..
T Consensus 237 ~~~~~~~~i~~~~~~-~~~~~~~~~v~s~---~~a~~a~~~G~D~i~v~~~~~~g~r~~~~~~~~~~~~l~~v~~~~~~~ 312 (471)
T 2cu0_A 237 HNLKAIKSMKEMRQK-VDADFIVGNIANP---KAVDDLTFADAVKVGIGPGSICTTRIVAGVGVPQITAVAMVADRAQEY 312 (471)
T ss_dssp CCHHHHHHHHHHHHT-CCSEEEEEEECCH---HHHTTCTTSSEEEECSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCC-CCCEEEEECCCCH---HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
T ss_conf 422100001221123-3210565235778---887765336600450134311145443444540554555440332245
Q ss_pred CCCEEEEEE
Q ss_conf 864999961
Q gi|254780368|r 109 NPIIVIAGK 117 (249)
Q Consensus 109 ~~DLIl~G~ 117 (249)
+..+|.-|-
T Consensus 313 ~i~vi~dGG 321 (471)
T 2cu0_A 313 GLYVIADGG 321 (471)
T ss_dssp TCEEEEESC
T ss_pred CCEEEECCC
T ss_conf 753785476
No 150
>>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} (A:)
Probab=21.44 E-value=50 Score=13.52 Aligned_cols=78 Identities=13% Similarity=0.029 Sum_probs=56.8
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCC-CCEEE
Q ss_conf 60136899999999855998528999971410158888878507776237633654788999999999861268-64999
Q gi|254780368|r 36 NPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKKEN-PIIVI 114 (249)
Q Consensus 36 n~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~-~DLIl 114 (249)
.--.-...+.|.+|.++ |..|++...-....+++..+....+..+...+.++-. |............+..+ .|+++
T Consensus 21 Gas~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~~~g~idilv 97 (265)
T 1h5q_A 21 GGNRGIGLAFTRAVAAA--GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVS-NTDIVTKTIQQIDADLGPISGLI 97 (265)
T ss_dssp TTTSHHHHHHHHHHHHT--TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTT-CHHHHHHHHHHHHHHSCSEEEEE
T ss_pred CCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCC-CHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 88819999999999987--9989999897788999999998753983589961220-01577799999999739977567
Q ss_pred EE
Q ss_conf 96
Q gi|254780368|r 115 AG 116 (249)
Q Consensus 115 ~G 116 (249)
..
T Consensus 98 nn 99 (265)
T 1h5q_A 98 AN 99 (265)
T ss_dssp EC
T ss_pred EC
T ss_conf 53
No 151
>>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, structural genomics; 2.00A {Exiguobacterium sibiricum 255-15} (A:1-104)
Probab=21.43 E-value=50 Score=13.52 Aligned_cols=71 Identities=13% Similarity=0.039 Sum_probs=42.7
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 26013689999999985599852899997141015888887850777623763365478899999999986126864999
Q gi|254780368|r 35 MNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKKENPIIVI 114 (249)
Q Consensus 35 in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~~DLIl 114 (249)
+.---++||..+++..+. |.+|.+.-..|...... -+|+.+.+.... |+ .--..|.+.+++++.|+|+
T Consensus 10 ~g~G~~~al~~a~~~~~~--~~~vi~~d~~~~~~~~~-------~~d~~~~iP~~~--~~-~~~~~l~~i~~~~~iD~vi 77 (104)
T 2pn1_A 10 TSAGRRAKLVEYFVKEFK--TGRVSTADCSPLASALY-------XADQHYIVPKID--EV-EYIDHLLTLCQDEGVTALL 77 (104)
T ss_dssp ESCTTCHHHHHHHHHHCC--SSEEEEEESCTTCGGGG-------GSSSEEECCCTT--ST-THHHHHHHHHHHHTCCEEE
T ss_pred CCCCHHHHHHHHHHHCCC--CCEEEEECCCCCCHHHH-------HCCEEEECCCCC--CH-HHHHHHHHHHHHHCCCEEE
T ss_conf 178469999999997699--99899986999986788-------428679768987--37-7999999999985999894
Q ss_pred EEE
Q ss_conf 961
Q gi|254780368|r 115 AGK 117 (249)
Q Consensus 115 ~G~ 117 (249)
.|.
T Consensus 78 p~~ 80 (104)
T 2pn1_A 78 TLI 80 (104)
T ss_dssp ESS
T ss_pred ECC
T ss_conf 046
No 152
>>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A (A:1-160)
Probab=20.53 E-value=53 Score=13.40 Aligned_cols=47 Identities=19% Similarity=0.097 Sum_probs=40.9
Q ss_pred ECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 71410158888878507776237633654788999999999861268
Q gi|254780368|r 63 IGSCKVEEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKKEN 109 (249)
Q Consensus 63 vG~~~~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~ 109 (249)
+|.....+.|++++..+--..+++....|.--..+|++||..+....
T Consensus 20 iG~~~~~~~l~~~i~~~~~~~~Ll~GppGtGKT~~a~~la~~l~~~~ 66 (160)
T 2chq_A 20 VGQDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLFGEN 66 (160)
T ss_dssp CSCHHHHHHHHTTTTTTCCCCEEEESSSSSSHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC
T ss_conf 19199999999999779987799889799999999999998725454
No 153
>>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus} (A:1-160)
Probab=20.53 E-value=53 Score=13.40 Aligned_cols=48 Identities=19% Similarity=0.088 Sum_probs=38.7
Q ss_pred EECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 971410158888878507776237633654788999999999861268
Q gi|254780368|r 62 SIGSCKVEEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKKEN 109 (249)
Q Consensus 62 svG~~~~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~~ 109 (249)
-+|.....+.|++++..+--..+++....|.--..+|++||..+....
T Consensus 19 iiG~~~~~~~l~~~i~~~~~~~~Ll~GppGtGKT~~a~~la~~l~~~~ 66 (160)
T 2chg_A 19 VVGQDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLFGEN 66 (160)
T ss_dssp CCSCHHHHHHHHHHHHTTCCCCEEEECSTTSSHHHHHHHHHHHHHGGG
T ss_pred CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC
T ss_conf 129599999999999769988599888999867789998888875256
No 154
>>2gno_A DNA polymerase III, gamma subunit-related protein; TM0771, structural genomics, PSI, protein structure initiative; HET: DNA; 2.00A {Thermotoga maritima MSB8} (A:1-140)
Probab=20.37 E-value=53 Score=13.38 Aligned_cols=77 Identities=18% Similarity=0.152 Sum_probs=58.1
Q ss_pred CCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCC---CCCEEEEEECCCCCCCEEHHHHHHHHHCCCCE
Q ss_conf 141015888887850777623763365478899999999986126---86499996113588861289999998579613
Q gi|254780368|r 64 GSCKVEEVLKNSLAMGADRGILIESNETLEPLSIAKILREIVKKE---NPIIVIAGKQTTDNESNQTGQMLAALMRWPQA 140 (249)
Q Consensus 64 G~~~~~~~Lr~alAmGaD~ai~i~d~~~~D~~~~A~~La~~i~~~---~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~v 140 (249)
|.+.+.+.|+..+..+--.++++..+.|.-=..+|+.+|..+... ..+..+.+..+........-...-....++.-
T Consensus 1 Gq~~~~~~l~~~i~~~~~~~iLl~GppG~GKT~la~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (140)
T 2gno_A 1 GAKDQLETLKRIIEKSEGISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEGENIGIDDIRTIKDFLNYSPEL 80 (140)
T ss_dssp ---CHHHHHHHHHHTCSSEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSSSCBCHHHHHHHHHHHTSCCSS
T ss_pred CCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 96779999999996799865988898998879999999998734467799889973876779989999999998526535
Done!