HHSEARCH alignment of GI: 254780368 and SCOP domain: d1efpb_

Alignment
>d1efpb_ c.26.2.3 (B:) Small, beta subunit of electron transfer flavoprotein ETFP {Paracoccus denitrificans [TaxId: 266]}
Probab=100.00  E-value=0  Score=531.59  Aligned_cols=242  Identities=51%  Similarity=0.831  Sum_probs=234.4

Q ss_pred             CEEEEEEEEECCCCCCEEECCCCCEEEECCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCC
Q ss_conf             96999860303887605980788816324877332601368999999998559985289999714101588888785077
Q gi|254780368|r    1 MKILVPIKGVINYNTKVRIKNDYSGIETENTKISMNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGA   80 (249)
Q Consensus         1 M~I~V~vK~VpD~~~~i~i~~~~~~i~~~~~~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGa   80 (249)
                      |||+||+|||||++++++++++++.+++++++++|||||+||||+||||||+++|++|+++||||++++++||+||||||
T Consensus         1 MkI~VcvKqVPD~~~~~~i~~~~~~i~~~~~~~viNp~D~~AlE~Al~lke~~~g~~Vtvls~Gp~~a~~~lr~alAmGa   80 (246)
T d1efpb_           1 MKVLVPVKRLIDYNVKARVKSDGSGVDLANVKMSMNPFDEIAVEEAIRLKEKGQAEEIIAVSIGVKQAAETLRTALAMGA   80 (246)
T ss_dssp             CEEEEECCEEECTTSCCCBCTTSSCBCCTTCCEEECHHHHHHHHHHHHHHTTTSCSEEEEEEEESGGGHHHHHHHHHHTC
T ss_pred             CEEEEEEEECCCCCCEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHCC
T ss_conf             98999988677888636883799878535782146855799999999874228971999999647424899998886057


Q ss_pred             CCCEEEEC--C--CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEEECCCEEEEE
Q ss_conf             76237633--6--5478899999999986126864999961135888612899999985796133244334328659999
Q gi|254780368|r   81 DRGILIES--N--ETLEPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIKIIDNHAIVT  156 (249)
Q Consensus        81 D~ai~i~d--~--~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~~~~~~~~v~  156 (249)
                      |+++|+.+  +  +++|+++||++||+++++.+|||||||+||+|+++||||+++|++|||||+|+|.++++++++++++
T Consensus        81 D~avli~~~~~~~~~~d~~ata~~la~~~~~~~~DLIl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~i~~~~~~i~v~  160 (246)
T d1efpb_          81 DRAILVVAADDVQQDIEPLAVAKILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASKVEIEGAKAKVT  160 (246)
T ss_dssp             SEEEEEECCSSTTCCCCHHHHHHHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEEEEECSSEEEEE
T ss_pred             CHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCEEEEE
T ss_conf             70048860355344658999999999987500898999973302346641328999986265156799999818779999


Q ss_pred             EECCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEECHHHHCCCCCCCEEEEEEECCCCCCCCEEECCHH
Q ss_conf             83589679999639889998435565454698889988521661204989076666845799951788524745537999
Q gi|254780368|r  157 REVGHGTMTMETPLPAVITVDLNLNEPRYISLPNIIKARKKRIEKKKATDFAIDLTPRLKVLRFEENRAERKGLRLYSTT  236 (249)
Q Consensus       157 r~~e~g~e~v~~~lPavisv~~~~n~PR~psl~~im~A~kk~i~~~~~~dlg~d~~~~~~v~~~~~p~~~~~g~~~e~~~  236 (249)
                      |++++|+|++++++|||+||++++|+||||||++||+|+||||++|+++|||++.+|++++.++++|++|++++++++++
T Consensus       161 R~~e~g~e~v~~~lPavltv~~~~n~PR~pslk~im~A~kk~i~~~~~~dlgl~~~~~~~v~~~~~p~~r~~~~~~~~~~  240 (246)
T d1efpb_         161 REVDGGLQTIAVSLPAVVTADLRLNEPRYASLPNIMKAKKKPLDEKTAADYGVDVAPRLEVVSVREPEGRKAGIKVGSVD  240 (246)
T ss_dssp             EEETTEEEEEEEESSEEEEECTTSCCCCCCCHHHHHHHTTSCEEEEEGGGGTCCCCCSEEEEEEECCCCCCCCEECSSHH
T ss_pred             EECCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEECCHHHCCCCCCCCEEEEEEECCCCCCCCEEECCHH
T ss_conf             99169889999658769997668777665557789987158851758999497778956999984699886876968999


Q ss_pred             HHHHHH
Q ss_conf             999999
Q gi|254780368|r  237 KLIEIL  242 (249)
Q Consensus       237 eLv~~L  242 (249)
                      |++++|
T Consensus       241 Elv~kL  246 (246)
T d1efpb_         241 ELVGKL  246 (246)
T ss_dssp             HHHTTC
T ss_pred             HHHHHC
T ss_conf             999529


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: ETFP subunits
domain: Small, beta subunit of electron transfer flavoprotein ETFP
species: Paracoccus denitrificans [TaxId: 266]