PSIBLAST alignment of GI: 254780368 and protein with PDB id: 1o94
gi|28949074|pdb|1O94|C Chain C, Ternary Complex Between Trimethylamine Dehydrogenase And Electron Transferring Flavoprotein Length = 264
>gi|28949076|pdb|1O94|E Chain E, Ternary Complex Between Trimethylamine Dehydrogenase And Electron Transferring Flavoprotein Length = 264
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 16/260 (6%)
Query: 1 MKILVPIKGVINYNTKVRIKNDYSGIETENTKISMNPFDEIALEESLQLREKGI-ATEVI 59
MKILV +K I+ D ++ + +N +D+ +LEE+++++E EV+
Sbjct: 1 MKILVAVKQTAALEEDFEIREDGMDVDEDFMMYDLNEWDDFSLEEAMKIKESSDTDVEVV 60
Query: 60 VVSIGSCKVEEVLKNSLAMGADRGILIESN--ETLEPLSIAKILREIVKKENPIIVIAGK 117
VVS+G +V+E L+ LA GADR + + + E + + + +IL E++KKE P +V AG
Sbjct: 61 VVSVGPDRVDESLRKCLAKGADRAVRVWDDAAEGSDAIVVGRILTEVIKKEAPDMVFAGV 120
Query: 118 QTTDNESNQTGQMLAALMRWPQATFVSNI--KIIDNHAIVTREVGHG-TMTMETPLPAVI 174
Q++D TG +A+ + WP A V+++ K DN A++ RE+ G +E PAV+
Sbjct: 121 QSSDQAYASTGISVASYLNWPHAAVVADLQYKPGDNKAVIRRELEGGMLQEVEINCPAVL 180
Query: 175 TVDLNLNEPRYISLPNIIKARKKRIEKKKATDFAID------LTPRLKVLRFEENRAERK 228
T+ L +N+PRY SL I +A K IE+ D + +V R R
Sbjct: 181 TIQLGINKPRYASLRGIKQAATKPIEEVSLADIGLSANDVGAAQSMSRVRRMYIPEKGRA 240
Query: 229 ----GLRLYSTTKLIEILKS 244
G K+I+I+
Sbjct: 241 TMIEGTISEQAAKIIQIINE 260