HHsearch alignment for GI: 254780369 and conserved domain: COG0028

Probab=95.98  E-value=0.041  Score=33.59  Aligned_cols=264  Identities=20%  Similarity=0.194  Sum_probs=125.5

Q ss_pred             EECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHH-HHHHHHHCCCCEECCC
Q ss_conf             981892688899870789739999448101000123224557874034560441578103446-7888875177410132
Q gi|254780369|r   41 VLGDNIENIAQQAARIQGVTQVIVAQSTIFRHKLAGPVSDFVVSIARDYKTIMASANAMGKDI-LPRVAAMLDVMQVSEV  119 (318)
Q Consensus        41 v~G~~~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~a~~l~~~~~~~~~Vl~~~t~~Grdl-aprlAarL~~~~vsdv  119 (318)
T Consensus        23 iPG~~i~~~~dal~~~-~i-~~I~~RHEq~Aa~mAdgyar~----TGkpgV~~~tsGPGatN~~tgla~A~~d~~Pll~i   96 (550)
T COG0028          23 IPGGSILPLYDALYDS-GI-RHILVRHEQGAAFAADGYARA----TGKPGVCLVTSGPGATNLLTGLADAYMDSVPLLAI   96 (550)
T ss_pred             CCCCCHHHHHHHHHHC-CC-CEEEECCHHHHHHHHHHHHHH----HCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf             8781278999999876-98-089867589999999999998----29987999767976888899999998719988999


Q ss_pred             EE-E----CC-------CC-EEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCEEE--
Q ss_conf             02-2----46-------87-2797410695268999779842799516864333355666661562111024453025--
Q gi|254780369|r  120 IE-I----IS-------PK-IFKRPSYTGNIIQTIETTDTYQIITIRAIAFPPAPKAEKVASIHKISAEVLEKYISNT--  184 (318)
Q Consensus       120 v~-i----~~-------~~-~~~rp~fgG~~~a~v~~~~~~~viTvr~~sf~~~~~~~~~~~v~~~~~~~~~~~~~~~--  184 (318)
T Consensus        97 tGqv~~~~~g~~afQe~D~~~l~~p~--tk~~~~v~~~~--~ip~~i~~Af~~A~sgrpGpv~i~iP~Dv~~~~~~~~~~  172 (550)
T COG0028          97 TGQVPTSLIGTDAFQEVDQVGLFRPI--TKYNFEVRSPE--DIPEVVARAFRIALSGRPGPVVVDLPKDVLAAEAEEPGP  172 (550)
T ss_pred             ECCCCCCCCCCCCCHHCCHHHHHHHH--HEEEEEECCHH--HHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCC
T ss_conf             57865265677710230488875243--14789968999--999999999999852899629997285476461556555


Q ss_pred             -EE-EEEEECCCCC--------CCHHHCC-EEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCHHH--HH
Q ss_conf             -88-5444314566--------6700074-5641367777833568899999876398597425788678888889--54
Q gi|254780369|r  185 -RF-IKEERTSLSP--------TDLSSAK-IVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAVDAGFAPNDW--QI  251 (318)
Q Consensus       185 -~~-i~~~~~~~~~--------v~L~~A~-iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~vD~gw~p~~~--qI  251 (318)
T Consensus       173 ~~~~~~~~~p~~~~~~~i~~aa~~L~~AkrPvIl~G~G~~~a~a~-~~l~~lae~~~~Pv~~t~~gk--g~~p~~hp~~l  249 (550)
T COG0028         173 EPAILPPYRPAPPPPEAIRKAAELLAEAKRPVILAGGGVRRAGAS-EELRELAEKLGAPVVTTLMGK--GAVPEDHPLSL  249 (550)
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHH-HHHHHHHHHHCCCEEECCCCC--CCCCCCCCCCC
T ss_conf             444556768898848999999999973899789988865641349-999999998798989724557--66787687535


Q ss_pred             HCCCCEE--------C-CCEEEEEEECCHHHH--HHH-HCCCCEEEEEECCCCCCH-HHCCCEEEECCHHHHHHHHHHCC
Q ss_conf             0159754--------5-738999961672645--555-168988999766599883-10276457523899999988609
Q gi|254780369|r  252 GQTGVTV--------S-PELYIAAGISGAIQH--ISG-MKDSKVIVSINTDENAPI-FKISDYFIVGDIFKILPEIEKNL  318 (318)
Q Consensus       252 G~tG~~v--------~-P~lYia~GISGa~qH--~~G-~~~s~~IvAIN~D~~ApI-f~~ad~giv~D~~~vlp~l~~~l  318 (318)
T Consensus       250 G~~g~~g~~~a~~~~~~aDlll~vG~rf~~~~~~~~~f~~~~~-ii~vDidp~ei~k~~~~~~~i~gD~~~~l~~l~~~~  328 (550)
T COG0028         250 GMLGMHGTKAANEALEEADLLLAVGARFDDRVTGYSGFAPPAA-IIHIDIDPAEIGKNYPVDVPIVGDAKATLEALLEEL  328 (550)
T ss_pred             CCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCHHHCCCCCC-EEEECCCHHHHCCCCCCCCEECCCHHHHHHHHHHHH
T ss_conf             4344565088997654388999958778655543021277566-589538868838656777312067999999999976