HHsearch alignment of GI: 254780369 and MMDB domain: 3cf4_G_
>3cf4_G (G:) Acetyl-COA decarbonylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductase; 2.00A {Methanosarcina barkeri}
Probab=97.33 E-value=0.0011 Score=43.07 Aligned_cols=119 Identities=13% Similarity=0.001 Sum_probs=90.4
Q ss_pred HHHCC-EEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEE---HHHHHCC---CCC----HHHHHHCCCCEE------CCC
Q ss_conf 00074-564136777783356889999987639859742---5788678---888----889540159754------573
Q gi|254780369|r 199 LSSAK-IVISGGKSFGSMENFHKLLLPLAKKLGAAIGAT---RDAVDAG---FAP----NDWQIGQTGVTV------SPE 261 (318)
Q Consensus 199 L~~A~-iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~S---Rp~vD~g---w~p----~~~qIG~tG~~v------~P~ 261 (318)
|.+|+ -++-.|.|....+.+. -+.+||+++|+-+..| |.+++.. |+. ..-++|..+..- ..|
T Consensus 31 L~~AkrPvii~G~~~~~~~~~~-~l~~lae~~g~Pv~~t~~gkg~~~~~hp~~~g~~~g~~g~~G~~~~~~~~~~~~~aD 109 (170)
T 3cf4_G 31 ISKAKRPLLMVGTLALDPELLD-RVVKISKAANIPIAATGSSLAVLADKDVDAKYINAHMLGFYLTDPKWPGLDGNGNYD 109 (170)
T ss_dssp HHHCSSEEEEECSTTCCHHHHH-HHHHHHHHHTCCEEECTTTHHHHTTSSSCEEECCHHHHHHHTTCTTCCCSSSSCCCS
T ss_pred HHHCCCCEEEECCCCCCHHHHH-HHHHHHHHHCCCEEECHHHCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCC
T ss_conf 9966998899688864326899-999999984978898722267677668211164522246522102788885334678
Q ss_pred EEEEEEECCHHHHHHHH--CCCCEEEEEECCCCCCHHHCCCEEEECC--HHHHHHHHHHCC
Q ss_conf 89999616726455551--6898899976659988310276457523--899999988609
Q gi|254780369|r 262 LYIAAGISGAIQHISGM--KDSKVIVSINTDENAPIFKISDYFIVGD--IFKILPEIEKNL 318 (318)
Q Consensus 262 lYia~GISGa~qH~~G~--~~s~~IvAIN~D~~ApIf~~ad~giv~D--~~~vlp~l~~~l 318 (318)
+.|.+|-.=.-.+..|. +..+.++-||.||+---....|+++++| +.++|.+|+++|
T Consensus 110 lii~iG~~~~~~~t~~~~~~~~~~~i~Id~d~~~~~~~~~~~~~~~da~~~~~L~~L~~~L 170 (170)
T 3cf4_G 110 MIITIGFKKFYINQVLSAAKNFSNLKTIAIERGYIQNATMSFGNLSKADHYAALDELINAL 170 (170)
T ss_dssp EEEEESCCHHHHHHHHHHHHHHCCCCEEECSSSCCTTSSEECCCCCHHHHHHHHHHHHHTC
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCEEEEEECHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 8999577004214120233466770799828013147652558555899999999999609