HHsearch alignment of GI: 254780369 and MMDB domain: 3fet_A_
>3fet_A (A:) Electron transfer flavoprotein subunit alpha related protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=99.92 E-value=4e-24 Score=173.21 Aligned_cols=154 Identities=16% Similarity=0.196 Sum_probs=129.5
Q ss_pred EEEEEEEEEECCCEECHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf 23489999802975878999999999873893479998189268889987078973999944810100012322455787
Q gi|254780369|r 5 DMPVLLLADYNQENLSEQTARIVTAAQKISHDIHVLVLGDNIENIAQQAARIQGVTQVIVAQSTIFRHKLAGPVSDFVVS 84 (318)
Q Consensus 5 ~M~ilV~~E~~~g~l~~~slEll~~A~~lg~~v~avv~G~~~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~a~~l~~ 84 (318)
.++||||.|+. +.++|+++++|++| +++++++|.+. +.. +|+|++|.++++.+ ++.+++++++
T Consensus 3 ~~~vlV~~e~~-----~~alE~~~~ak~~~-~~~av~~G~~~------~~~-~Gad~v~~v~~~~~----~~~~a~ala~ 65 (166)
T 3fet_A 3 AXKFLTVSDDX-----NFLRQVNTLVAGKG-DXDSVIIGEGD------AKG-LGSKVLYRAKKGTP----FDAVSEGILK 65 (166)
T ss_dssp SEEEEEEESSH-----HHHHHHHHHHGGGE-EEEEEEESCCC------CTT-CCCSEEEEECTTCC----HHHHHHHHHH
T ss_pred CCEEEEEECCH-----HHHHHHHHHHHCCC-CEEEEEECCCH------HHH-CCCEEEEECCCCCH----HHHHHHHHHH
T ss_conf 31799996788-----89999999863279-66999986706------553-76439999269735----6779999999
Q ss_pred HCCCCCEEECCCCCHHHHHHHHHHHHCCCCEECCCEEEC--C-CCEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCC
Q ss_conf 403456044157810344678888751774101320224--6-8727974106952689997798427995168643333
Q gi|254780369|r 85 IARDYKTIMASANAMGKDILPRVAAMLDVMQVSEVIEII--S-PKIFKRPSYTGNIIQTIETTDTYQIITIRAIAFPPAP 161 (318)
Q Consensus 85 ~~~~~~~Vl~~~t~~GrdlaprlAarL~~~~vsdvv~i~--~-~~~~~rp~fgG~~~a~v~~~~~~~viTvr~~sf~~~~ 161 (318)
++++|++||+++|..||+++||||+||++++++||++++ + ...++|+.|+|+...++.+ +|+|+|+|+++|+|.+
T Consensus 66 ~~~~~dlVl~g~t~~g~~la~~lA~~L~~~~vsdv~~i~~~~~~~~~~r~~~gg~~~~~~~~--~paVitv~~~~~~~~~ 143 (166)
T 3fet_A 66 IAGNYDYIAIGSTEVGREIAGYLSFKTGFYTATEIFSLEFNGQKAHTKRFFYGGKTVIEEES--DARILTVAPGVIEAKD 143 (166)
T ss_dssp HHTTCSEEEEECSHHHHHHHHHHHHHHCCCEEEEEEEEEESSSSEEEEEEEGGGTEEEEEEE--CCCEEEECTTSSCCCC
T ss_pred HHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEECCCEEEEEEEC--CCCEEEECCCCCCCCC
T ss_conf 84799999993682266789999998599754435998747980899988528828999966--9819998688646675
Q ss_pred CCCCCCCEEEEECCCCC
Q ss_conf 55666661562111024
Q gi|254780369|r 162 KAEKVASIHKISAEVLE 178 (318)
Q Consensus 162 ~~~~~~~v~~~~~~~~~ 178 (318)
++..+.++....+...
T Consensus 144 -~~~~~~v~~~~~~i~~ 159 (166)
T 3fet_A 144 -LGTTPEIRDLEIGQSR 159 (166)
T ss_dssp -CSCCCEEEECCCCCCC
T ss_pred -CCCCCCEEEECCCCCC
T ss_conf -7899855996247775