HHsearch alignment of GI: 254780369 and MMDB domain: 3ih5_A_1-122_163-217

>3ih5_A (A:1-122,A:163-217) Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=99.91  E-value=3.4e-23  Score=167.34  Aligned_cols=143  Identities=14%  Similarity=0.243  Sum_probs=127.2

Q ss_pred             EEEEEEEECCCEECHHHHHHHHHHHHH----CCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             489999802975878999999999873----8934799981892688899870789739999448101000123224557
Q gi|254780369|r    7 PVLLLADYNQENLSEQTARIVTAAQKI----SHDIHVLVLGDNIENIAQQAARIQGVTQVIVAQSTIFRHKLAGPVSDFV   82 (318)
Q Consensus         7 ~ilV~~E~~~g~l~~~slEll~~A~~l----g~~v~avv~G~~~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~a~~l   82 (318)
                      +||||+|+.+|.+++.++|++++|++|    |.++.++++|.+.+..+.++..+ |+|+||.++++.+.+|.++.|+++|
T Consensus         5 ~IlVv~E~~~g~l~~~slElL~~A~~LA~~~G~~V~alv~G~~~~~~~~~l~a~-Gad~Vi~v~~~~l~~~~~e~~a~aL   83 (177)
T 3ih5_A            5 NLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILPY-GVDKLHVFDAEGLYPYTSLPHTSIL   83 (177)
T ss_dssp             CEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGGG-TCSEEEEEECGGGSSCCHHHHHHHH
T ss_pred             CEEEEEECCCCEECHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHC-CCCEEEEECCCHHCCCCHHHHHHHH
T ss_conf             789999835999988999999999999986499489999679758988765212-7624999767200232067899999


Q ss_pred             HHHCC--CCCEEECCCCCHHHHHHHHHHHHCCCCEECCCEEECCCCEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCC
Q ss_conf             87403--4560441578103446788887517741013202246872797410695268999779842799516864333
Q gi|254780369|r   83 VSIAR--DYKTIMASANAMGKDILPRVAAMLDVMQVSEVIEIISPKIFKRPSYTGNIIQTIETTDTYQIITIRAIAFPPA  160 (318)
Q Consensus        83 ~~~~~--~~~~Vl~~~t~~GrdlaprlAarL~~~~vsdvv~i~~~~~~~rp~fgG~~~a~v~~~~~~~viTvr~~sf~~~  160 (318)
                      .++++  +|++||+|+|..||+++||||++|++++++||.                         +|+|.|+|-|.+...
T Consensus        84 a~~ik~~~p~lVL~g~Ts~GrdlaprLAa~LgaglvsdV~-------------------------~~~~~~~~~~~~~~~  138 (177)
T 3ih5_A           84 VNLFKEEQPQICLXGATVIGRDLGPRVSSALTSGLTADCH-------------------------RPQXATVREGVXKKE  138 (177)
T ss_dssp             HHHHHHHCCSEEEEECSHHHHHHHHHHHHHTTCCCBCSCS-------------------------SSEEEEECTTSSCCC
T ss_pred             HHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCEC-------------------------CCEEEEECCCCCCCC
T ss_conf             9887532651588526874878999999984998641359-------------------------748999878864666


Q ss_pred             C-CCCCCCCEEEEECC
Q ss_conf             3-55666661562111
Q gi|254780369|r  161 P-KAEKVASIHKISAE  175 (318)
Q Consensus       161 ~-~~~~~~~v~~~~~~  175 (318)
                      - .+.-.+++...+..
T Consensus       139 ~~~~~~~~~~~~~~~~  154 (177)
T 3ih5_A          139 IVSPAYQGEVIRHDVK  154 (177)
T ss_dssp             CSCTTCCCEEEECCHH
T ss_pred             CCCCCCCCEEEEECCC
T ss_conf             5678997238983167