HHsearch results for GI: 254780369 and protein with PDBid: 1efp_B

>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=98.62  E-value=1.6e-06  Score=60.32  Aligned_cols=154  Identities=16%  Similarity=0.170  Sum_probs=106.7

Q ss_pred             EECHHHHHHHHHHHHH----CC-CEEEEEECCC-HHHHHHHHHCCCCCCEEEEECC--CHHHHHHHHHHHHHHHHHCC--
Q ss_conf             5878999999999873----89-3479998189-2688899870789739999448--10100012322455787403--
Q gi|254780369|r   18 NLSEQTARIVTAAQKI----SH-DIHVLVLGDN-IENIAQQAARIQGVTQVIVAQS--TIFRHKLAGPVSDFVVSIAR--   87 (318)
Q Consensus        18 ~l~~~slEll~~A~~l----g~-~v~avv~G~~-~~~~a~~~~~~~Gad~V~~~~~--~~~~~~~~~~~a~~l~~~~~--   87 (318)
                      .+++...-+|-.|-+|    ++ +++++.+|.. .++...+++.. |+|+.+.+.+  ..+....+...+.+|+..++  
T Consensus        34 ~inp~D~~AlE~Al~lke~~~g~~V~v~s~G~~~~~~~lr~alam-Gad~a~~i~~~~~~~~~~d~~~ta~~la~~~~~~  112 (252)
T 1efp_B           34 SMNPFDEIAVEEAIRLKEKGQAEEIIAVSIGVKQAAETLRTALAM-GADRAILVVAADDVQQDIEPLAVAKILAAVARAE  112 (252)
T ss_dssp             EECHHHHHHHHHHHHHHTTTSCSEEEEEEEESGGGHHHHHHHHHH-TCSEEEEEECCSSTTCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHC-CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf             468546999999999754279809999996637879999988623-7982699992453466778999999999998741


Q ss_pred             CCCEEECCC---CCHHHHHHHHHHHHCCCCEECCCEEEC--CC-CEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCC
Q ss_conf             456044157---810344678888751774101320224--68-727974106952689997798427995168643333
Q gi|254780369|r   88 DYKTIMASA---NAMGKDILPRVAAMLDVMQVSEVIEII--SP-KIFKRPSYTGNIIQTIETTDTYQIITIRAIAFPPAP  161 (318)
Q Consensus        88 ~~~~Vl~~~---t~~GrdlaprlAarL~~~~vsdvv~i~--~~-~~~~rp~fgG~~~a~v~~~~~~~viTvr~~sf~~~~  161 (318)
                      +|++||++.   .....-+.|.||.+|+.|+++.|++++  ++ ..++|..=+|  ..++++ ..|+++|+.++..+|--
T Consensus       113 ~~DLIl~G~~s~D~~~g~vg~~lAe~Lg~P~vt~v~~ie~~~~~~~v~r~~e~g--~e~ve~-~lPavitv~~~~n~PR~  189 (252)
T 1efp_B          113 GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASKVEIEGAKAKVTREVDGG--LQTIAV-SLPAVVTADLRLNEPRY  189 (252)
T ss_dssp             TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEEEEECSSEEEEEEEETTE--EEEEEE-ESSEEEEECTTSCCCCC
T ss_pred             CCCEEEEEEECCCCCCCCCCHHHHHHCCCCCEEEEEEEEEECCEEEEEEECCCC--EEEEEE-CCCEEEEEECCCCCCCC
T ss_conf             999999983256678884216889762898135789999829979999996894--899994-59779996568787767


Q ss_pred             C------CCCCCCEEEEECC
Q ss_conf             5------5666661562111
Q gi|254780369|r  162 K------AEKVASIHKISAE  175 (318)
Q Consensus       162 ~------~~~~~~v~~~~~~  175 (318)
                      .      .....+++..+..
T Consensus       190 pslk~im~A~kk~i~~~~~~  209 (252)
T 1efp_B          190 ASLPNIMKAKKKPLDEKTAA  209 (252)
T ss_dssp             CCHHHHHHHTTSCEEEEEGG
T ss_pred             CCHHHHHHHHCCCCEECCHH
T ss_conf             89889998615884171799