HHsearch results for GI: 254780369 and protein with PDBid: 1efp_B
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=98.62 E-value=1.6e-06 Score=60.32 Aligned_cols=154 Identities=16% Similarity=0.170 Sum_probs=106.7
Q ss_pred EECHHHHHHHHHHHHH----CC-CEEEEEECCC-HHHHHHHHHCCCCCCEEEEECC--CHHHHHHHHHHHHHHHHHCC--
Q ss_conf 5878999999999873----89-3479998189-2688899870789739999448--10100012322455787403--
Q gi|254780369|r 18 NLSEQTARIVTAAQKI----SH-DIHVLVLGDN-IENIAQQAARIQGVTQVIVAQS--TIFRHKLAGPVSDFVVSIAR-- 87 (318)
Q Consensus 18 ~l~~~slEll~~A~~l----g~-~v~avv~G~~-~~~~a~~~~~~~Gad~V~~~~~--~~~~~~~~~~~a~~l~~~~~-- 87 (318)
.+++...-+|-.|-+| ++ +++++.+|.. .++...+++.. |+|+.+.+.+ ..+....+...+.+|+..++
T Consensus 34 ~inp~D~~AlE~Al~lke~~~g~~V~v~s~G~~~~~~~lr~alam-Gad~a~~i~~~~~~~~~~d~~~ta~~la~~~~~~ 112 (252)
T 1efp_B 34 SMNPFDEIAVEEAIRLKEKGQAEEIIAVSIGVKQAAETLRTALAM-GADRAILVVAADDVQQDIEPLAVAKILAAVARAE 112 (252)
T ss_dssp EECHHHHHHHHHHHHHHTTTSCSEEEEEEEESGGGHHHHHHHHHH-TCSEEEEEECCSSTTCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHC-CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 468546999999999754279809999996637879999988623-7982699992453466778999999999998741
Q ss_pred CCCEEECCC---CCHHHHHHHHHHHHCCCCEECCCEEEC--CC-CEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCC
Q ss_conf 456044157---810344678888751774101320224--68-727974106952689997798427995168643333
Q gi|254780369|r 88 DYKTIMASA---NAMGKDILPRVAAMLDVMQVSEVIEII--SP-KIFKRPSYTGNIIQTIETTDTYQIITIRAIAFPPAP 161 (318)
Q Consensus 88 ~~~~Vl~~~---t~~GrdlaprlAarL~~~~vsdvv~i~--~~-~~~~rp~fgG~~~a~v~~~~~~~viTvr~~sf~~~~ 161 (318)
+|++||++. .....-+.|.||.+|+.|+++.|++++ ++ ..++|..=+| ..++++ ..|+++|+.++..+|--
T Consensus 113 ~~DLIl~G~~s~D~~~g~vg~~lAe~Lg~P~vt~v~~ie~~~~~~~v~r~~e~g--~e~ve~-~lPavitv~~~~n~PR~ 189 (252)
T 1efp_B 113 GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASKVEIEGAKAKVTREVDGG--LQTIAV-SLPAVVTADLRLNEPRY 189 (252)
T ss_dssp TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEEEEECSSEEEEEEEETTE--EEEEEE-ESSEEEEECTTSCCCCC
T ss_pred CCCEEEEEEECCCCCCCCCCHHHHHHCCCCCEEEEEEEEEECCEEEEEEECCCC--EEEEEE-CCCEEEEEECCCCCCCC
T ss_conf 999999983256678884216889762898135789999829979999996894--899994-59779996568787767
Q ss_pred C------CCCCCCEEEEECC
Q ss_conf 5------5666661562111
Q gi|254780369|r 162 K------AEKVASIHKISAE 175 (318)
Q Consensus 162 ~------~~~~~~v~~~~~~ 175 (318)
. .....+++..+..
T Consensus 190 pslk~im~A~kk~i~~~~~~ 209 (252)
T 1efp_B 190 ASLPNIMKAKKKPLDEKTAA 209 (252)
T ss_dssp CCHHHHHHHTTSCEEEEEGG
T ss_pred CCHHHHHHHHCCCCEECCHH
T ss_conf 89889998615884171799