HHsearch results for GI: 254780369 and protein with PDBid: 1o97_D

>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D*
Probab=100.00  E-value=0  Score=685.14  Aligned_cols=306  Identities=24%  Similarity=0.380  Sum_probs=274.9

Q ss_pred             EEEEEEEECCCEECHHHHHHHHHHHHH----CCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf             489999802975878999999999873----8934799981892688899870789739999448101000123224557
Q gi|254780369|r    7 PVLLLADYNQENLSEQTARIVTAAQKI----SHDIHVLVLGDNIENIAQQAARIQGVTQVIVAQSTIFRHKLAGPVSDFV   82 (318)
Q Consensus         7 ~ilV~~E~~~g~l~~~slEll~~A~~l----g~~v~avv~G~~~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~a~~l   82 (318)
                      |||||+||+||+|++.|||++++||+|    +.++.++++|++.++.++++.. ||+|+||.++++.++ |+++.|++++
T Consensus         2 kIlViaE~~~g~l~~~slEll~~A~~La~~~g~~v~avv~G~~~~~~a~~l~~-~Gad~V~~~~~~~l~-~~~~~~a~~l   79 (320)
T 1o97_D            2 KILVIAEHRRNDLRPVSLELIGAANGLKKSGEDKVVVAVIGSQADAFVPALSV-NGVDELVVVKGSSID-FDPDVFEASV   79 (320)
T ss_dssp             EEEEECCEETTEECTHHHHHHHHHHHHCSSTTCEEEEEEESTTGGGGHHHHCB-TTCSEEEEEECSCSS-CCHHHHHHHH
T ss_pred             EEEEEEEECCCEECHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHH-CCCCEEEEECCHHHC-CCHHHHHHHH
T ss_conf             79999981599998999999999999887179948999968970999998755-398789996682540-3547799999


Q ss_pred             HHHCC--CCCEEECCCCCHHHHHHHHHHHHCCCCEECCCEEEC---CCCEEEEEEECCCEEEEEEECC-CCEEEEECCCC
Q ss_conf             87403--456044157810344678888751774101320224---6872797410695268999779-84279951686
Q gi|254780369|r   83 VSIAR--DYKTIMASANAMGKDILPRVAAMLDVMQVSEVIEII---SPKIFKRPSYTGNIIQTIETTD-TYQIITIRAIA  156 (318)
Q Consensus        83 ~~~~~--~~~~Vl~~~t~~GrdlaprlAarL~~~~vsdvv~i~---~~~~~~rp~fgG~~~a~v~~~~-~~~viTvr~~s  156 (318)
                      +++++  +|++||+|+|++||||+||||+||++++++||++++   +..+++||+|+|++++++.++. .|+|+|+||++
T Consensus        80 ~~~i~~~~p~~VL~~~T~~GrdlaprlAarL~~~~vsDv~~l~~~~~~l~~~Rp~~gG~~~a~~~~~~~~~~v~tvr~~~  159 (320)
T 1o97_D           80 SALIAAHNPSVVLLPHSVDSLGYASSLASKTGYGFATDVYIVEYQGDELVATRGGYNQKVNVEVDFPGKSTVVLTIRPSV  159 (320)
T ss_dssp             HHHHHHHCCSEEEEECSHHHHTTHHHHHHTSSCEEEEEECEEEEETTEEEEEEEETTTTEEEEEECTTCSCEEEEECTTS
T ss_pred             HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCEECCCEEECCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEECCCC
T ss_conf             99998638988999435456774578899848982514021013687379998402532689862488872578864765


Q ss_pred             CCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCHHHCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf             43333556666615621110244530258854443145666700074564136777783356889999987639859742
Q gi|254780369|r  157 FPPAPKAEKVASIHKISAEVLEKYISNTRFIKEERTSLSPTDLSSAKIVISGGKSFGSMENFHKLLLPLAKKLGAAIGAT  236 (318)
Q Consensus       157 f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~v~L~~A~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~S  236 (318)
                      |++.+. .+...++.+..+.......  .....+...+++++|++|++|||+||||+++||| +++++||++|||++|||
T Consensus       160 f~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~L~~A~iVVsgGRG~~~~en~-~l~~eLA~~LgaavGaS  235 (320)
T 1o97_D          160 FKPLEG-AGSPVVSNVDAPSVQSRSQ--NKDYVEVGGGNDIDITTVDFIMSIGRGIGEETNV-EQFRELADEAGATLCCS  235 (320)
T ss_dssp             SCCCCS-BCCCEEEEEECCCCCCSEE--EEEEECCC---CCCCSCSSEEEEECGGGCSGGGH-HHHHHHHHHHTCEEEEC
T ss_pred             CCCCCC-CCCCCEEEECCCCCCCCCE--EEEEEEECCCCCCCCCCCCEEEEECCCCCCCCHH-HHHHHHHHHHCCCEEEC
T ss_conf             444445-7997169833656566624--6678981344444456653699716656772027-89999999839824424


Q ss_pred             HHHHHCCCCCHHHHHHCCCCEE-CCCEEEEEEECCHHHHHHHHCCCCEEEEEECCCCCCHHHCCCEEEECCHHHHHHHHH
Q ss_conf             5788678888889540159754-573899996167264555516898899976659988310276457523899999988
Q gi|254780369|r  237 RDAVDAGFAPNDWQIGQTGVTV-SPELYIAAGISGAIQHISGMKDSKVIVSINTDENAPIFKISDYFIVGDIFKILPEIE  315 (318)
Q Consensus       237 Rp~vD~gw~p~~~qIG~tG~~v-~P~lYia~GISGa~qH~~G~~~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~l~  315 (318)
                      ||+||+||+||++|||||||+| +|+||||||||||+|||+||++||+||||||||+||||++||||||||+++|||+|+
T Consensus       236 R~~vD~gw~p~~~qvGqtG~~v~~P~lYia~GISGa~QH~~G~~~s~~IvAIN~D~~ApIf~~adygivgD~~~vlp~l~  315 (320)
T 1o97_D          236 RPIADAGWLPKSRQVGQSGKVVGSCKLYVAMGISGSIQHMAGMKHVPTIIAVNTDPGASIFTIAKYGIVADIFDIEEELK  315 (320)
T ss_dssp             HHHHHTTSSCGGGBBSTTSBCCTTCSEEEEESCCCCHHHHHHHTTCSEEEEECSCTTCGGGGTCSEEECSCHHHHHHHHH
T ss_pred             HHHHHCCCCCCCCEEECCCCEECCCCEEEEEEEECHHHHHHHHCCCCEEEEEECCCCCCCHHHCCEEEECCHHHHHHHHH
T ss_conf             85876799995656967884725886899994117488887503598899985899998621189889750999999999


Q ss_pred             HCC
Q ss_conf             609
Q gi|254780369|r  316 KNL  318 (318)
Q Consensus       316 ~~l  318 (318)
                      |+|
T Consensus       316 ~~l  318 (320)
T 1o97_D          316 AQL  318 (320)
T ss_dssp             HHC
T ss_pred             HHH
T ss_conf             986