HHsearch results for GI: 254780369 and protein with PDBid: 1o97_D
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D*
Probab=100.00 E-value=0 Score=685.14 Aligned_cols=306 Identities=24% Similarity=0.380 Sum_probs=274.9
Q ss_pred EEEEEEEECCCEECHHHHHHHHHHHHH----CCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHH
Q ss_conf 489999802975878999999999873----8934799981892688899870789739999448101000123224557
Q gi|254780369|r 7 PVLLLADYNQENLSEQTARIVTAAQKI----SHDIHVLVLGDNIENIAQQAARIQGVTQVIVAQSTIFRHKLAGPVSDFV 82 (318)
Q Consensus 7 ~ilV~~E~~~g~l~~~slEll~~A~~l----g~~v~avv~G~~~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~a~~l 82 (318)
|||||+||+||+|++.|||++++||+| +.++.++++|++.++.++++.. ||+|+||.++++.++ |+++.|++++
T Consensus 2 kIlViaE~~~g~l~~~slEll~~A~~La~~~g~~v~avv~G~~~~~~a~~l~~-~Gad~V~~~~~~~l~-~~~~~~a~~l 79 (320)
T 1o97_D 2 KILVIAEHRRNDLRPVSLELIGAANGLKKSGEDKVVVAVIGSQADAFVPALSV-NGVDELVVVKGSSID-FDPDVFEASV 79 (320)
T ss_dssp EEEEECCEETTEECTHHHHHHHHHHHHCSSTTCEEEEEEESTTGGGGHHHHCB-TTCSEEEEEECSCSS-CCHHHHHHHH
T ss_pred EEEEEEEECCCEECHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHH-CCCCEEEEECCHHHC-CCHHHHHHHH
T ss_conf 79999981599998999999999999887179948999968970999998755-398789996682540-3547799999
Q ss_pred HHHCC--CCCEEECCCCCHHHHHHHHHHHHCCCCEECCCEEEC---CCCEEEEEEECCCEEEEEEECC-CCEEEEECCCC
Q ss_conf 87403--456044157810344678888751774101320224---6872797410695268999779-84279951686
Q gi|254780369|r 83 VSIAR--DYKTIMASANAMGKDILPRVAAMLDVMQVSEVIEII---SPKIFKRPSYTGNIIQTIETTD-TYQIITIRAIA 156 (318)
Q Consensus 83 ~~~~~--~~~~Vl~~~t~~GrdlaprlAarL~~~~vsdvv~i~---~~~~~~rp~fgG~~~a~v~~~~-~~~viTvr~~s 156 (318)
+++++ +|++||+|+|++||||+||||+||++++++||++++ +..+++||+|+|++++++.++. .|+|+|+||++
T Consensus 80 ~~~i~~~~p~~VL~~~T~~GrdlaprlAarL~~~~vsDv~~l~~~~~~l~~~Rp~~gG~~~a~~~~~~~~~~v~tvr~~~ 159 (320)
T 1o97_D 80 SALIAAHNPSVVLLPHSVDSLGYASSLASKTGYGFATDVYIVEYQGDELVATRGGYNQKVNVEVDFPGKSTVVLTIRPSV 159 (320)
T ss_dssp HHHHHHHCCSEEEEECSHHHHTTHHHHHHTSSCEEEEEECEEEEETTEEEEEEEETTTTEEEEEECTTCSCEEEEECTTS
T ss_pred HHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCEECCCEEECCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEECCCC
T ss_conf 99998638988999435456774578899848982514021013687379998402532689862488872578864765
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCHHHCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 43333556666615621110244530258854443145666700074564136777783356889999987639859742
Q gi|254780369|r 157 FPPAPKAEKVASIHKISAEVLEKYISNTRFIKEERTSLSPTDLSSAKIVISGGKSFGSMENFHKLLLPLAKKLGAAIGAT 236 (318)
Q Consensus 157 f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~v~L~~A~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~S 236 (318)
|++.+. .+...++.+..+....... .....+...+++++|++|++|||+||||+++||| +++++||++|||++|||
T Consensus 160 f~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~L~~A~iVVsgGRG~~~~en~-~l~~eLA~~LgaavGaS 235 (320)
T 1o97_D 160 FKPLEG-AGSPVVSNVDAPSVQSRSQ--NKDYVEVGGGNDIDITTVDFIMSIGRGIGEETNV-EQFRELADEAGATLCCS 235 (320)
T ss_dssp SCCCCS-BCCCEEEEEECCCCCCSEE--EEEEECCC---CCCCSCSSEEEEECGGGCSGGGH-HHHHHHHHHHTCEEEEC
T ss_pred CCCCCC-CCCCCEEEECCCCCCCCCE--EEEEEEECCCCCCCCCCCCEEEEECCCCCCCCHH-HHHHHHHHHHCCCEEEC
T ss_conf 444445-7997169833656566624--6678981344444456653699716656772027-89999999839824424
Q ss_pred HHHHHCCCCCHHHHHHCCCCEE-CCCEEEEEEECCHHHHHHHHCCCCEEEEEECCCCCCHHHCCCEEEECCHHHHHHHHH
Q ss_conf 5788678888889540159754-573899996167264555516898899976659988310276457523899999988
Q gi|254780369|r 237 RDAVDAGFAPNDWQIGQTGVTV-SPELYIAAGISGAIQHISGMKDSKVIVSINTDENAPIFKISDYFIVGDIFKILPEIE 315 (318)
Q Consensus 237 Rp~vD~gw~p~~~qIG~tG~~v-~P~lYia~GISGa~qH~~G~~~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~l~ 315 (318)
||+||+||+||++|||||||+| +|+||||||||||+|||+||++||+||||||||+||||++||||||||+++|||+|+
T Consensus 236 R~~vD~gw~p~~~qvGqtG~~v~~P~lYia~GISGa~QH~~G~~~s~~IvAIN~D~~ApIf~~adygivgD~~~vlp~l~ 315 (320)
T 1o97_D 236 RPIADAGWLPKSRQVGQSGKVVGSCKLYVAMGISGSIQHMAGMKHVPTIIAVNTDPGASIFTIAKYGIVADIFDIEEELK 315 (320)
T ss_dssp HHHHHTTSSCGGGBBSTTSBCCTTCSEEEEESCCCCHHHHHHHTTCSEEEEECSCTTCGGGGTCSEEECSCHHHHHHHHH
T ss_pred HHHHHCCCCCCCCEEECCCCEECCCCEEEEEEEECHHHHHHHHCCCCEEEEEECCCCCCCHHHCCEEEECCHHHHHHHHH
T ss_conf 85876799995656967884725886899994117488887503598899985899998621189889750999999999
Q ss_pred HCC
Q ss_conf 609
Q gi|254780369|r 316 KNL 318 (318)
Q Consensus 316 ~~l 318 (318)
|+|
T Consensus 316 ~~l 318 (320)
T 1o97_D 316 AQL 318 (320)
T ss_dssp HHC
T ss_pred HHH
T ss_conf 986