HHsearch results for GI: 254780369 and protein with PDBid: 1ybh_A
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=92.53 E-value=0.54 Score=25.08 Aligned_cols=289 Identities=13% Similarity=0.112 Sum_probs=128.5
Q ss_pred CEECHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEECCC
Q ss_conf 75878999999999873893479998189268889987078973999944810100012322455787403456044157
Q gi|254780369|r 17 ENLSEQTARIVTAAQKISHDIHVLVLGDNIENIAQQAARIQGVTQVIVAQSTIFRHKLAGPVSDFVVSIARDYKTIMASA 96 (318)
Q Consensus 17 g~l~~~slEll~~A~~lg~~v~avv~G~~~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~a~~l~~~~~~~~~Vl~~~ 96 (318)
++....+--++-.-++.|-+.-..+.|.....+.+.+.+..+. +++...|+.-.-|.++.|+++ -.++.+++..+
T Consensus 9 ~~~~~Gad~l~~~L~~~GV~~vfg~pG~~~~~l~~al~~~~~i-~~i~~~~E~~A~~~A~Gyar~----tg~p~v~~~ts 83 (590)
T 1ybh_A 9 DQPRKGADILVEALERQGVETVFAYPGGASMEIHQALTRSSSI-RNVLPRHEQGGVFAAEGYARS----SGKPGICIATS 83 (590)
T ss_dssp TCCEEHHHHHHHHHHTTTCCEEEECCCGGGHHHHHHHHHCSSC-EECCCSSHHHHHHHHHHHHHH----HSSCEEEEECT
T ss_pred CCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCC-EEEEECCHHHHHHHHHHHHHH----HCCCEEEEECC
T ss_conf 9998499999999998799899997897669999999865997-599038889999999999999----79988999814
Q ss_pred CCH-HHHHHHHHHHHCCCCEECCCEE-----ECCCC---EE-EEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 810-3446788887517741013202-----24687---27-97410695268999779842799516864333355666
Q gi|254780369|r 97 NAM-GKDILPRVAAMLDVMQVSEVIE-----IISPK---IF-KRPSYTGNIIQTIETTDTYQIITIRAIAFPPAPKAEKV 166 (318)
Q Consensus 97 t~~-GrdlaprlAarL~~~~vsdvv~-----i~~~~---~~-~rp~fgG~~~a~v~~~~~~~viTvr~~sf~~~~~~~~~ 166 (318)
.+- ..-+.+-..|..+.-.+=-.+. ..+.. .. ...+|+.-........+.-.+..+-..+|..+-. ...
T Consensus 84 Gpg~~n~~~al~~A~~~~~Pll~isg~~~~~~~g~~~~q~~dq~~~~~~~~k~~~~v~~~~~i~~~l~~A~~~a~~-~~~ 162 (590)
T 1ybh_A 84 GPGATNLVSGLADALLDSVPLVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVMDVEDIPRIIEEAFFLATS-GRP 162 (590)
T ss_dssp THHHHTTHHHHHHHHHHTCCEEEEEEECCGGGTTTTCTTCCCHHHHHGGGSSEEEECCCGGGHHHHHHHHHHHHHS-SSC
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHCCCCCCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHH-CCC
T ss_conf 7789999999999997299979996888877617786224434420565066788769999999999999999852-899
Q ss_pred CCE-EEEECCCCCC-----CCEEEE---EEEEEECCCCCC-------CHHHC--CEEEECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 661-5621110244-----530258---854443145666-------70007--45641367777833568899999876
Q gi|254780369|r 167 ASI-HKISAEVLEK-----YISNTR---FIKEERTSLSPT-------DLSSA--KIVISGGKSFGSMENFHKLLLPLAKK 228 (318)
Q Consensus 167 ~~v-~~~~~~~~~~-----~~~~~~---~i~~~~~~~~~v-------~L~~A--~iVVsgGRGi~~~enf~~l~~~LA~~ 228 (318)
+.| ..+..+.... .....+ .....+.....- -|..| .+|+. |+|..... +.+.+||++
T Consensus 163 GPV~l~ip~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~a~rpvii~-G~~~~~~~---~~l~~lae~ 238 (590)
T 1ybh_A 163 GPVLVDVPKDIQQQLAIPNWEQAMRLPGYMSRMPKPPEDSHLEQIVRLISESKKPVLYV-GGGCLNSS---DELGRFVEL 238 (590)
T ss_dssp CEEEEEEEHHHHHCEECCCTTCCCCCHHHHHHSCCCCCHHHHHHHHHHHHHCSSEEEEE-CGGGTTCH---HHHHHHHHH
T ss_pred CEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE-CCCCCCHH---HHHHHHHHH
T ss_conf 44999806641103357775323457776655678988899999999997179909998-98544459---999999998
Q ss_pred CCCEEEEEHH---HHHCCCCCHHHHHHCCCC---------EECCCEEEEEEECCHHHHH---HHHCCCCEEEEEECCCC-
Q ss_conf 3985974257---886788888895401597---------5457389999616726455---55168988999766599-
Q gi|254780369|r 229 LGAAIGATRD---AVDAGFAPNDWQIGQTGV---------TVSPELYIAAGISGAIQHI---SGMKDSKVIVSINTDEN- 292 (318)
Q Consensus 229 LgaavG~SRp---~vD~gw~p~~~qIG~tG~---------~v~P~lYia~GISGa~qH~---~G~~~s~~IvAIN~D~~- 292 (318)
+|+-|-+|-. +.+. .+....|..|. .-.+|+-|.+|-+=..+-. .-......+|-|+.|+.
T Consensus 239 ~~~Pv~~t~~~~~~~~~---~~~~~~g~~g~~~~~~a~~~~~~aD~vl~lG~~~~~~~~~~~~~~~~~~~vi~i~~d~~~ 315 (590)
T 1ybh_A 239 TGIPVASTLMGLGSYPA---DDELSLHMLGMHGTVYANYAVEHSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAE 315 (590)
T ss_dssp HCCCEEECTTTTTSSCT---TSTTEEEECSTTSCHHHHHHHHHCSEEEEESCCCCHHHHSSGGGTTTTSEEEEEESCTTT
T ss_pred HCCCEEECCCCCCCCCC---CCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCHHH
T ss_conf 79899987535756788---675456645676779998666419999997986753455542235898728998279899
Q ss_pred CCHHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf 88310276457523899999988609
Q gi|254780369|r 293 APIFKISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 293 ApIf~~ad~giv~D~~~vlp~l~~~l 318 (318)
-.-+...|..+++|...++.+|.+.|
T Consensus 316 ~~~~~~~~~~v~~d~~~~l~~l~~~l 341 (590)
T 1ybh_A 316 IGKNKTPHVSVCGDVKLALQGMNKVL 341 (590)
T ss_dssp TTSSSCCSEEEESCHHHHHHHHHHHH
T ss_pred HCCCCCCCEEEECCHHHHHHHHHHHH
T ss_conf 46554774466152899999999998